Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0012629

Physical Location & Seq

Genomic Coordinates Reverse (-)

27771981 .. 27774513

Gene Structure 2533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0285800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGCAACCACCCAGCTACTACTACTTCTCCTCCTCCCTTTCATTTTAAACCCTTTCCCAAATGTAGCCGTTTCCGGGGTCGGCATTAACTACGGCACTCTTGGAAACAACCTCCCACCACCAAAAAGAGTAGCTCAGCTACTACAGTCCACTCTCATAGACAAGGTAAAAATTTATGACACCAACCCGGAGATCCTCCAGGCCTTCTCCAACACCGGGATCGACCTCATTGTCGCCGTGGAGAACTCCCGGGTGGCCAACATCAGCTCCGACGTGTCCTCAGCCGACCAGTGGTTCGCCACTCGTGTCCTGCCCTTCATTCCTGCCACTTCCATCACAGCCATTGCTGTAGGAAACGAGTACCTAACTTCAAACAGTGATCACCAAGTACTTGACCCTGCTGCTCTTGTCCAAGCAATGCAGAACTTGCATTCAGTGCTCATAGCCCGAGCACTCGACAGAAAGATCAAGATCACAACTCCACATAGCATGGCCATTTTAGCCTCCTCATTTCCTCCTTCAGCTTCAACTTTTGCTACAGATCTCGTACCAACTATGACTTCAATAGTTGCATTCTTGGCTGATACTGCCTCCCCTTTTATGATCAATGCATACCCTTATTTTGCATACAGGGACAACCCAGACATGGTTAATATACAATATGCTTTACTAGGGAACTCAACGTCAACCGGTGTGCGTGACCCCAAGGGGTACACATACACCAACATGTTGGATGCACAGATTGATGCTGTTCGGTCTGCGGTTAATGCACTAGGACTAGGACCACACCGGGCAGTGGAGATTATGGTATCCGAATCCGGGTGGCCATCCAAAGGAGACACTAATGAAATTGCTGCCACCCCGGAAAATGCCAAGACTTACAACACAAGGCTGATCGAACGCGCACAGTCCAACAAAGGAACACCCATGAAGCCTCTAGACAAGATTGAGGTGTTTGTGTTTGCTTTGTTTAATGAGAACAAGAAAGAAGGGGTTGCAAGTGAGAGGAACTTTGGGATTTTTAATGGTGATGGGTCAAAGGTGTATGAGGTGGACTTGAGCTGCCAGTTTTGCAGTGGTGATAGTGGTAATGGTGGTAATGGAGGGTTTGGTGAGAAACTATCTGGTGCGGTCAGGGGACCGTCGGTTTGGTGCATTGCTAAGCCACATGCTGATGAGAAGGTGCTTCAGGCTGTGTTGGATTTTTGCTGTGGCGGTGGCGGTGTGGACTGCAGAGAGATATATGAAAATGGGGATTGCTTTGCGCCTGATAAGCTGCTTGCACATGCATCATATGCTATGAATGCTTATTACCAGATGCATGGAAGGAACTACTGGAATTGTGACTTCAAGGGCACTGGCTTAGTAACTTTTAGTGATCCAACTTATGGGAGATGCCGGTATCCTCAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

DUF4414 DUF908 DUF913 HECT UBA

Protein Analysis

471

Amino Acids

50.98

Weight (kDa)

5.45

Isoelectric Point (pI)

27.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	27 - 352	4.3e-81	Glycosyl hydrolases family 17
X8	PF07983	384 - 454	4.3e-20	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012629)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34290 FvH4_5g34290
malus_domestica	MD08G1203000.v1.1 MD08G1203200.v1.1 MD15G1388600.v1.1
prunus_persica	Prupe.1G535000_v2.0.a1
pyrus_communis	pycom08g17530 pycom15g34850
rosa_chinensis	RchiOBHm_Chr7g0234861
rosa_laevigata	RLG00000001209
rosa_multiflora	Rmu_sc0000039.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226700
rosa_rugosa	Rorug07G0285700 Rorug07G0285800
rosa_samantha	Rh7AG440400 Rh7BG413200 Rh7CG462100 Rh7DG430100
rosa_wichuraiana	Rw7G036610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	230
AccB7I	CCANNNNNTGG	1 cut(s)	1388
AccII	CGCG	1 cut(s)	903
AciI	CCGC	4 cut(s)	761, 1130, 1215, 1221
AclWI	GGATC	3 cut(s)	187, 227, 1373
AcoI	YGGCCR	3 cut(s)	255, 492, 824
AcsI	RAATTY	1 cut(s)	171
AcuI	CTGAAG	2 cut(s)	504, 1172
AfaI	GTAC	4 cut(s)	362, 390, 549, 713
AfiI	CCNNNNNNNGG	8 cut(s)	75, 216, 291, 646, 796, 819, 833, 1388
AflIII	ACRYGT	2 cut(s)	273, 726
AgeI	ACCGGT	1 cut(s)	689
AgsI	TTSAA	4 cut(s)	372, 528, 564, 1351
AjiI	CACGTC	1 cut(s)	274
AjnI	CCWGG	1 cut(s)	198
AjuI	GAANNNNNNNTTGG	2 cut(s)	544, 576
AluBI	AGCT	7 cut(s)	16, 134, 139, 267, 524, 1062, 1276
AluI	AGCT	7 cut(s)	16, 134, 139, 267, 524, 1062, 1276
Alw21I	GWGCWC	2 cut(s)	441, 454
Alw26I	GTCTC	1 cut(s)	831
AlwI	GGATC	3 cut(s)	187, 227, 1373
Ama87I	CYCGRG	2 cut(s)	249, 447
AoxI	GGCC	4 cut(s)	201, 255, 492, 824
ApeKI	GCWGC	4 cut(s)	401, 854, 1062, 1276
ApoI	RAATTY	1 cut(s)	171
ArsI	GACNNNNNNTTYG	4 cut(s)	278, 310, 1131, 1163
AsiGI	ACCGGT	1 cut(s)	689
AspLEI	GCGC	2 cut(s)	905, 1267
AspS9I	GGNCC	2 cut(s)	782, 1139
AsuC2I	CCSGG	8 cut(s)	76, 188, 217, 250, 251, 791, 820, 863
AsuHPI	GGTGA	4 cut(s)	374, 1040, 1091, 1124
AvaI	CYCGRG	2 cut(s)	249, 447
AvaII	GGWCC	2 cut(s)	782, 1139
BaeGI	GKGCMC	1 cut(s)	1358
BalI	TGGCCA	3 cut(s)	257, 494, 826
BauI	CACGAG	1 cut(s)	303
Bbv12I	GWGCWC	2 cut(s)	441, 454
BbvCI	CCTCAGC	1 cut(s)	280
BbvI	GCAGC	4 cut(s)	388, 841, 1049, 1263
BccI	CCATC	3 cut(s)	341, 835, 1025
BceAI	ACGGC	3 cut(s)	53, 109, 221
BciT130I	CCWGG	1 cut(s)	200
BciVI	GTATCC	2 cut(s)	820, 1413
BclI	TGATCA	2 cut(s)	379, 603
BcnI	CCSGG	8 cut(s)	76, 188, 217, 250, 251, 791, 820, 863
BcoDI	GTCTC	1 cut(s)	831
BfaI	CTAG	4 cut(s)	671, 773, 779, 938
BfmI	CTRYAG	4 cut(s)	143, 348, 537, 1231
BfuI	GTATCC	2 cut(s)	820, 1413
BglII	AGATCT	1 cut(s)	541
BisI	GCNGC	4 cut(s)	402, 855, 1063, 1277
BlpI	GCTNAGC	2 cut(s)	135, 1161
BlsI	GCNGC	4 cut(s)	403, 856, 1064, 1278
BmcAI	AGTACT	1 cut(s)	390
Bme1390I	CCNGG	9 cut(s)	76, 188, 200, 217, 250, 251, 791, 820, 863
Bme18I	GGWCC	2 cut(s)	782, 1139
BmeT110I	CYCGRG	2 cut(s)	249, 447
BmgBI	CACGTC	1 cut(s)	274
BmgT120I	GGNCC	2 cut(s)	782, 1139
BmiI	GGNNCC	1 cut(s)	1140
BmrFI	CCNGG	9 cut(s)	76, 188, 200, 217, 250, 251, 791, 820, 863
BmsI	GCATC	5 cut(s)	724, 736, 1298, 1308, 1385
BpmI	CTGGAG	1 cut(s)	182
Bpu10I	CCTNAGC	1 cut(s)	280
Bpu1102I	GCTNAGC	2 cut(s)	135, 1161
BpuEI	CTTGAG	1 cut(s)	1078
BpuMI	CCSGG	8 cut(s)	76, 188, 217, 250, 251, 791, 820, 863
BsaBI	GATNNNNATC	1 cut(s)	470
BsaJI	CCNNGG	5 cut(s)	75, 237, 249, 705, 861
BsaWI	WCCGGW	1 cut(s)	689
BsaXI	ACNNNNNCTCC	6 cut(s)	12, 15, 42, 45, 251, 281
Bsc4I	CCNNNNNNNGG	8 cut(s)	75, 216, 291, 646, 796, 819, 833, 1388
Bse118I	RCCGGY	2 cut(s)	689, 1398
Bse1I	ACTGG	4 cut(s)	289, 1066, 1340, 1363
Bse3DI	GCAATG	3 cut(s)	342, 423, 1155
Bse8I	GATNNNNATC	1 cut(s)	470
BseBI	CCWGG	1 cut(s)	200
BseDI	CCNNGG	5 cut(s)	75, 237, 249, 705, 861
BseGI	GGATG	2 cut(s)	739, 827
BseJI	GATNNNNATC	1 cut(s)	470
BseLI	CCNNNNNNNGG	8 cut(s)	75, 216, 291, 646, 796, 819, 833, 1388
BseMI	GCAATG	3 cut(s)	342, 423, 1155
BseMII	CTCAG	2 cut(s)	149, 294
BseNI	ACTGG	4 cut(s)	289, 1066, 1340, 1363
BseRI	GAGGAG	3 cut(s)	20, 23, 496
BseSI	GKGCMC	1 cut(s)	1358
BseXI	GCAGC	4 cut(s)	388, 841, 1049, 1263
BseYI	CCCAGC	1 cut(s)	12
Bsh1236I	CGCG	1 cut(s)	903
BshFI	GGCC	4 cut(s)	203, 257, 494, 826
BshTI	ACCGGT	1 cut(s)	689
BsiHKAI	GWGCWC	2 cut(s)	441, 454
BsiHKCI	CYCGRG	2 cut(s)	249, 447
BsiSI	CCGG	9 cut(s)	75, 188, 216, 250, 690, 790, 819, 863, 1399
BslFI	GGGAC	2 cut(s)	647, 1152
BslI	CCNNNNNNNGG	8 cut(s)	75, 216, 291, 646, 796, 819, 833, 1388
BsmAI	GTCTC	1 cut(s)	831
BsmFI	GGGAC	2 cut(s)	647, 1152
BsmI	GAATGC	3 cut(s)	430, 572, 1309
BsnI	GGCC	4 cut(s)	203, 257, 494, 826
BsoBI	CYCGRG	2 cut(s)	249, 447
Bsp1286I	GDGCHC	3 cut(s)	441, 454, 1358
Bsp143I	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
Bsp1720I	GCTNAGC	2 cut(s)	135, 1161
BspACI	CCGC	4 cut(s)	761, 1130, 1215, 1221
BspANI	GGCC	4 cut(s)	203, 257, 494, 826
BspCNI	CTCAG	2 cut(s)	148, 293
BspFNI	CGCG	1 cut(s)	903
BspLI	GGNNCC	1 cut(s)	1140
BspMAI	CTGCAG	1 cut(s)	1235
BspPI	GGATC	3 cut(s)	187, 227, 1373
BsrDI	GCAATG	3 cut(s)	342, 423, 1155
BsrFI	RCCGGY	2 cut(s)	689, 1398
BsrI	ACTGG	4 cut(s)	289, 1066, 1340, 1363
BssAI	RCCGGY	2 cut(s)	689, 1398
BssECI	CCNNGG	5 cut(s)	75, 237, 249, 705, 861
BssMI	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
BssSI	CACGAG	1 cut(s)	303
BssT1I	CCWWGG	1 cut(s)	705
Bst2BI	CACGAG	1 cut(s)	303
Bst2UI	CCWGG	1 cut(s)	200
Bst4CI	ACNGT	5 cut(s)	147, 377, 909, 1143, 1413
BstAPI	GCANNNNNTGC	3 cut(s)	427, 436, 1295
BstC8I	GCNNGC	1 cut(s)	1281
BstDEI	CTNAG	4 cut(s)	135, 280, 1161, 1363
BstDSI	CCRYGG	1 cut(s)	237
BstF5I	GGATG	2 cut(s)	739, 827
BstFNI	CGCG	1 cut(s)	903
BstHHI	GCGC	2 cut(s)	905, 1267
BstKTI	GATC	9 cut(s)	195, 222, 382, 468, 474, 544, 606, 897, 1381
BstMAI	GTCTC	1 cut(s)	831
BstMBI	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
BstNI	CCWGG	1 cut(s)	200
BstNSI	RCATGY	3 cut(s)	730, 1172, 1289
BstSCI	CCNGG	9 cut(s)	74, 186, 198, 215, 248, 249, 789, 818, 861
BstSFI	CTRYAG	4 cut(s)	143, 348, 537, 1231
BstSLI	GKGCMC	1 cut(s)	1358
BstUI	CGCG	1 cut(s)	903
BstV1I	GCAGC	4 cut(s)	388, 841, 1049, 1263
BstX2I	RGATCY	2 cut(s)	192, 541
BstXI	CCANNNNNNTGG	2 cut(s)	730, 1322
BstYI	RGATCY	2 cut(s)	192, 541
BsuI	GTATCC	2 cut(s)	820, 1413
BsuRI	GGCC	4 cut(s)	203, 257, 494, 826
BtgI	CCRYGG	1 cut(s)	237
BtrI	CACGTC	1 cut(s)	274
BtsCI	GGATG	2 cut(s)	739, 827
BtsI	GCAGTG	2 cut(s)	801, 1081
BtsIMutI	CAGTG	6 cut(s)	296, 382, 441, 801, 1081, 1356
Cac8I	GCNNGC	1 cut(s)	1281
CfoI	GCGC	2 cut(s)	905, 1267
Cfr10I	RCCGGY	2 cut(s)	689, 1398
Cfr13I	GGNCC	2 cut(s)	782, 1139
Cfr9I	CCCGGG	1 cut(s)	249
Csp6I	GTAC	4 cut(s)	361, 389, 548, 712
CspAI	ACCGGT	1 cut(s)	689
CviAII	CATG	7 cut(s)	490, 646, 727, 928, 1169, 1286, 1322
CviQI	GTAC	4 cut(s)	361, 389, 548, 712
DdeI	CTNAG	4 cut(s)	135, 280, 1161, 1363
DpnI	GATC	9 cut(s)	194, 221, 381, 467, 473, 543, 605, 896, 1380
DpnII	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
DraI	TTTAAA	1 cut(s)	48
DrdI	GACNNNNNNGTC	1 cut(s)	230
DseDI	GACNNNNNNGTC	1 cut(s)	230
EaeI	YGGCCR	3 cut(s)	255, 492, 824
Eco130I	CCWWGG	1 cut(s)	705
Eco147I	AGGCCT	1 cut(s)	203
Eco47I	GGWCC	2 cut(s)	782, 1139
Eco57I	CTGAAG	2 cut(s)	504, 1172
Eco88I	CYCGRG	2 cut(s)	249, 447
EcoRII	CCWGG	1 cut(s)	198
EcoT14I	CCWWGG	1 cut(s)	705
EcoT22I	ATGCAT	3 cut(s)	613, 1291, 1323
ErhI	CCWWGG	1 cut(s)	705
FaeI	CATG	7 cut(s)	493, 649, 730, 931, 1172, 1289, 1325
FaqI	GGGAC	2 cut(s)	647, 1152
FatI	CATG	7 cut(s)	489, 645, 726, 927, 1168, 1285, 1321
FauNDI	CATATG	1 cut(s)	1294
FbaI	TGATCA	2 cut(s)	379, 603
Fnu4HI	GCNGC	4 cut(s)	402, 855, 1063, 1277
FokI	GGATG	2 cut(s)	746, 814
Fsp4HI	GCNGC	4 cut(s)	402, 855, 1063, 1277
FspBI	CTAG	4 cut(s)	671, 773, 779, 938
GlaI	GCGC	2 cut(s)	904, 1266
GluI	GCNGC	4 cut(s)	402, 855, 1063, 1277
GsaI	CCCAGC	1 cut(s)	16
GsuI	CTGGAG	1 cut(s)	182
HaeIII	GGCC	4 cut(s)	203, 257, 494, 826
HapII	CCGG	9 cut(s)	75, 188, 216, 250, 690, 790, 819, 863, 1399
HhaI	GCGC	2 cut(s)	905, 1267
Hin1II	CATG	7 cut(s)	493, 649, 730, 931, 1172, 1289, 1325
Hin6I	GCGC	2 cut(s)	903, 1265
HinP1I	GCGC	2 cut(s)	903, 1265
HincII	GTYRAC	1 cut(s)	687
HindII	GTYRAC	1 cut(s)	687
HinfI	GANTC	1 cut(s)	815
HpaII	CCGG	9 cut(s)	75, 188, 216, 250, 690, 790, 819, 863, 1399
HphI	GGTGA	4 cut(s)	374, 1040, 1091, 1124
Hpy166II	GTNNAC	5 cut(s)	150, 687, 714, 1054, 1228
Hpy188I	TCNGA	2 cut(s)	271, 814
Hpy188III	TCNNGA	2 cut(s)	469, 938
Hpy8I	GTNNAC	5 cut(s)	150, 687, 714, 1054, 1228
Hpy99I	CGWCG	2 cut(s)	275, 1147
HpyAV	CCTTC	6 cut(s)	214, 325, 528, 983, 1174, 1320
HpyCH4III	ACNGT	5 cut(s)	147, 377, 909, 1143, 1413
HpyCH4IV	ACGT	2 cut(s)	273, 683
HpyF3I	CTNAG	4 cut(s)	135, 280, 1161, 1363
HpySE526I	ACGT	2 cut(s)	273, 683
Hsp92II	CATG	7 cut(s)	493, 649, 730, 931, 1172, 1289, 1325
HspAI	GCGC	2 cut(s)	903, 1265
Ksp22I	TGATCA	2 cut(s)	379, 603
Kzo9I	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
LmnI	GCTCC	1 cut(s)	272
Lsp1109I	GCAGC	4 cut(s)	388, 841, 1049, 1263
LweI	GCATC	5 cut(s)	724, 736, 1298, 1308, 1385
MaeI	CTAG	4 cut(s)	671, 773, 779, 938
MaeII	ACGT	2 cut(s)	273, 683
MaeIII	GTNAC	3 cut(s)	698, 1343, 1366
MalI	GATC	9 cut(s)	194, 221, 381, 467, 473, 543, 605, 896, 1380
MboI	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
MflI	RGATCY	2 cut(s)	192, 541
MhlI	GDGCHC	3 cut(s)	441, 454, 1358
MlsI	TGGCCA	3 cut(s)	257, 494, 826
MluCI	AATT	3 cut(s)	171, 849, 1339
MluNI	TGGCCA	3 cut(s)	257, 494, 826
MmeI	TCCRAC	6 cut(s)	234, 294, 711, 936, 1179, 1406
Mox20I	TGGCCA	3 cut(s)	257, 494, 826
Mph1103I	ATGCAT	3 cut(s)	613, 1291, 1323
MscI	TGGCCA	3 cut(s)	257, 494, 826
MseI	TTAA	6 cut(s)	47, 87, 651, 765, 972, 1023
MslI	CAYNNNNRTG	2 cut(s)	725, 1173
Msp20I	TGGCCA	3 cut(s)	257, 494, 826
MspI	CCGG	9 cut(s)	75, 188, 216, 250, 690, 790, 819, 863, 1399
MspR9I	CCNGG	9 cut(s)	76, 188, 200, 217, 250, 251, 791, 820, 863
Mva1269I	GAATGC	3 cut(s)	430, 572, 1309
MvaI	CCWGG	1 cut(s)	200
MvnI	CGCG	1 cut(s)	903
NciI	CCSGG	8 cut(s)	76, 188, 217, 250, 251, 791, 820, 863
NdeI	CATATG	1 cut(s)	1294
NdeII	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
NlaIII	CATG	7 cut(s)	493, 649, 730, 931, 1172, 1289, 1325
NlaIV	GGNNCC	1 cut(s)	1140
NmuCI	GTSAC	2 cut(s)	698, 1343
NsiI	ATGCAT	3 cut(s)	613, 1291, 1323
NspI	RCATGY	3 cut(s)	730, 1172, 1289
PceI	AGGCCT	1 cut(s)	203
PciI	ACATGT	1 cut(s)	726
PctI	GAATGC	3 cut(s)	430, 572, 1309
PfeI	GAWTC	1 cut(s)	815
PflMI	CCANNNNNTGG	1 cut(s)	1388
PinAI	ACCGGT	1 cut(s)	689
PkrI	GCNGC	4 cut(s)	403, 856, 1064, 1278
PscI	ACATGT	1 cut(s)	726
Psp6I	CCWGG	1 cut(s)	198
PspFI	CCCAGC	1 cut(s)	12
PspGI	CCWGG	1 cut(s)	198
PspN4I	GGNNCC	1 cut(s)	1140
PspPI	GGNCC	2 cut(s)	782, 1139
PstI	CTGCAG	1 cut(s)	1235
PsuI	RGATCY	2 cut(s)	192, 541
RsaI	GTAC	4 cut(s)	362, 390, 549, 713
RsaNI	GTAC	4 cut(s)	361, 389, 548, 712
RseI	CAYNNNNRTG	2 cut(s)	725, 1173
SaqAI	TTAA	6 cut(s)	47, 87, 651, 765, 972, 1023
SatI	GCNGC	4 cut(s)	402, 855, 1063, 1277
Sau3AI	GATC	9 cut(s)	192, 219, 379, 465, 471, 541, 603, 894, 1378
Sau96I	GGNCC	2 cut(s)	782, 1139
ScaI	AGTACT	1 cut(s)	390
ScrFI	CCNGG	9 cut(s)	76, 188, 200, 217, 250, 251, 791, 820, 863
SduI	GDGCHC	3 cut(s)	441, 454, 1358
SfaNI	GCATC	5 cut(s)	724, 736, 1298, 1308, 1385
SfcI	CTRYAG	4 cut(s)	143, 348, 537, 1231
SinI	GGWCC	2 cut(s)	782, 1139
SmaI	CCCGGG	1 cut(s)	251
SmiMI	CAYNNNNRTG	2 cut(s)	725, 1173
SmlI	CTYRAG	1 cut(s)	1057
SmoI	CTYRAG	1 cut(s)	1057
Sse9I	AATT	3 cut(s)	171, 849, 1339
SseBI	AGGCCT	1 cut(s)	203
SsiI	CCGC	4 cut(s)	761, 1130, 1215, 1221
SspMI	CTAG	4 cut(s)	671, 773, 779, 938
StuI	AGGCCT	1 cut(s)	203
StyD4I	CCNGG	9 cut(s)	74, 186, 198, 215, 248, 249, 789, 818, 861
StyI	CCWWGG	1 cut(s)	705
TaaI	ACNGT	5 cut(s)	147, 377, 909, 1143, 1413
TaiI	ACGT	2 cut(s)	276, 686
TaqI	TCGA	3 cut(s)	222, 456, 897
TaqII	GACCGA	1 cut(s)	744
TasI	AATT	3 cut(s)	171, 849, 1339
TatI	WGTACW	1 cut(s)	388
TfiI	GAWTC	1 cut(s)	815
Tru1I	TTAA	6 cut(s)	47, 87, 651, 765, 972, 1023
Tru9I	TTAA	6 cut(s)	47, 87, 651, 765, 972, 1023
TscAI	CASTG	6 cut(s)	296, 382, 441, 801, 1081, 1363
TseFI	GTSAC	2 cut(s)	698, 1343
TseI	GCWGC	4 cut(s)	401, 854, 1062, 1276
Tsp45I	GTSAC	2 cut(s)	698, 1343
TspDTI	ATGAA	6 cut(s)	31, 307, 861, 944, 1260, 1316
TspMI	CCCGGG	1 cut(s)	249
TspRI	CASTG	6 cut(s)	296, 382, 441, 801, 1081, 1363
Van91I	CCANNNNNTGG	1 cut(s)	1388
VpaK11BI	GGWCC	2 cut(s)	782, 1139
XapI	RAATTY	1 cut(s)	171
XbaI	TCTAGA	1 cut(s)	937
XceI	RCATGY	3 cut(s)	730, 1172, 1289
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1073
XmaI	CCCGGG	1 cut(s)	249
XspI	CTAG	4 cut(s)	671, 773, 779, 938
ZrmI	AGTACT	1 cut(s)	390
Zsp2I	ATGCAT	3 cut(s)	613, 1291, 1323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.