E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g34290 FvH4_5g34290 |
| malus_domestica | MD08G1203000.v1.1 MD08G1203200.v1.1 MD15G1388600.v1.1 |
| prunus_persica | Prupe.1G535000_v2.0.a1 |
| pyrus_communis | pycom08g17530 pycom15g34850 |
| rosa_chinensis | RchiOBHm_Chr7g0234861 |
| rosa_laevigata | RLG00000001209 |
| rosa_multiflora | Rmu_sc0000039.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00226700 |
| rosa_rugosa | Rorug07G0285700 Rorug07G0285800 |
| rosa_samantha | Rh7AG440400 Rh7BG413200 Rh7CG462100 Rh7DG430100 |
| rosa_wichuraiana | Rw7G036610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 8085 |
| AarI | CACCTGC | 4 cut(s) | 4459, 6534, 8041, 10010 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 157 |
| Acc36I | ACCTGC | 5 cut(s) | 1624, 4459, 6534, 8041, 10010 |
| Acc65I | GGTACC | 2 cut(s) | 760, 5435 |
| AccB1I | GGYRCC | 5 cut(s) | 760, 5435, 6975, 10766, 10777 |
| AccB7I | CCANNNNNTGG | 7 cut(s) | 3661, 5719, 5971, 6154, 8969, 9602, 10213 |
| AccBSI | CCGCTC | 1 cut(s) | 1051 |
| AccI | GTMKAC | 3 cut(s) | 935, 3127, 3304 |
| AccII | CGCG | 6 cut(s) | 3625, 3627, 8194, 8283, 9817, 10231 |
| AccIII | TCCGGA | 1 cut(s) | 7831 |
| AclI | AACGTT | 1 cut(s) | 6672 |
| AcoI | YGGCCR | 4 cut(s) | 5819, 9661, 10204, 10438 |
| AcvI | CACGTG | 2 cut(s) | 8480, 8633 |
| AcyI | GRCGYC | 2 cut(s) | 6763, 6976 |
| AdeI | CACNNNGTG | 2 cut(s) | 5651, 7529 |
| AfeI | AGCGCT | 1 cut(s) | 10855 |
| AflIII | ACRYGT | 7 cut(s) | 1808, 2258, 6046, 7320, 8055, 8630, 9204 |
| AgeI | ACCGGT | 1 cut(s) | 6008 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3261 |
| AhlI | ACTAGT | 2 cut(s) | 373, 2227 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1708, 1740, 7246, 7278 |
| AleI | CACNNNNGTG | 2 cut(s) | 405, 8631 |
| Alw44I | GTGCAC | 3 cut(s) | 3981, 5290, 10797 |
| Ama87I | CYCGRG | 4 cut(s) | 65, 4974, 6026, 7545 |
| Aor13HI | TCCGGA | 1 cut(s) | 7831 |
| Aor51HI | AGCGCT | 1 cut(s) | 10855 |
| ApaI | GGGCCC | 1 cut(s) | 5569 |
| ApaLI | GTGCAC | 3 cut(s) | 3981, 5290, 10797 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 6033, 6065, 6501, 6533, 9952, 9984 |
| AsiGI | ACCGGT | 1 cut(s) | 6008 |
| Asp718I | GGTACC | 2 cut(s) | 760, 5435 |
| AspA2I | CCTAGG | 2 cut(s) | 2498, 6875 |
| AspLEI | GCGC | 8 cut(s) | 1591, 1980, 3627, 6774, 6978, 7789, 9033, 10856 |
| AsuC2I | CCSGG | 4 cut(s) | 1433, 7646, 8142, 8829 |
| AsuII | TTCGAA | 2 cut(s) | 2933, 9134 |
| AsuNHI | GCTAGC | 4 cut(s) | 1024, 3515, 3586, 5708 |
| AvaI | CYCGRG | 4 cut(s) | 65, 4974, 6026, 7545 |
| AvrII | CCTAGG | 2 cut(s) | 2498, 6875 |
| AxyI | CCTNAGG | 4 cut(s) | 336, 2432, 8582, 9676 |
| BaeGI | GKGCMC | 7 cut(s) | 1057, 3805, 3985, 5294, 5569, 10081, 10801 |
| BaeI | ACNNNNGTAYC | 8 cut(s) | 1797, 1830, 3259, 3292, 5283, 5316, 10892, 10925 |
| BalI | TGGCCA | 2 cut(s) | 9663, 10206 |
| BamHI | GGATCC | 3 cut(s) | 2948, 4978, 9322 |
| BanI | GGYRCC | 5 cut(s) | 760, 5435, 6975, 10766, 10777 |
| BanII | GRGCYC | 7 cut(s) | 774, 1021, 3427, 5569, 8236, 8436, 9847 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 9229, 9261 |
| BauI | CACGAG | 5 cut(s) | 807, 3978, 4326, 9054, 10955 |
| BbrPI | CACGTG | 2 cut(s) | 8480, 8633 |
| BceAI | ACGGC | 5 cut(s) | 55, 1349, 2607, 3317, 10864 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2338, 2372 |
| BciVI | GTATCC | 4 cut(s) | 5253, 8118, 10664, 10920 |
| BclI | TGATCA | 7 cut(s) | 6103, 6544, 6553, 8413, 9877, 10611, 10858 |
| BcnI | CCSGG | 4 cut(s) | 1433, 7646, 8142, 8829 |
| BcuI | ACTAGT | 2 cut(s) | 373, 2227 |
| BfmI | CTRYAG | 8 cut(s) | 1415, 2169, 4118, 4694, 7158, 7290, 8312, 9275 |
| BfoI | RGCGCY | 3 cut(s) | 6979, 7790, 10857 |
| BfuAI | ACCTGC | 5 cut(s) | 1624, 4459, 6534, 8041, 10010 |
| BfuI | GTATCC | 4 cut(s) | 5253, 8118, 10664, 10920 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2081 |
| BglII | AGATCT | 3 cut(s) | 697, 5496, 6274 |
| BlnI | CCTAGG | 2 cut(s) | 2498, 6875 |
| BlpI | GCTNAGC | 4 cut(s) | 1020, 7803, 8430, 9413 |
| BmcAI | AGTACT | 3 cut(s) | 231, 2002, 2095 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3261 |
| BmeT110I | CYCGRG | 4 cut(s) | 65, 4974, 6026, 7545 |
| BmrI | ACTGGG | 3 cut(s) | 2848, 3694, 6163 |
| BmtI | GCTAGC | 4 cut(s) | 1028, 3519, 3590, 5712 |
| BmuI | ACTGGG | 3 cut(s) | 2848, 3694, 6163 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2889, 6853 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 8575, 8607 |
| BpmI | CTGGAG | 6 cut(s) | 634, 1106, 3329, 3781, 6668, 7839 |
| Bpu10I | CCTNAGC | 2 cut(s) | 8211, 10260 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 1020, 7803, 8430, 9413 |
| Bpu14I | TTCGAA | 2 cut(s) | 2933, 9134 |
| BpuEI | CTTGAG | 7 cut(s) | 1084, 1471, 7079, 9428, 10298, 10346, 10949 |
| BpuMI | CCSGG | 4 cut(s) | 1433, 7646, 8142, 8829 |
| BsaAI | YACGTR | 4 cut(s) | 1563, 8063, 8480, 8633 |
| BsaBI | GATNNNNATC | 6 cut(s) | 1290, 6108, 6148, 7827, 8695, 9882 |
| BsaHI | GRCGYC | 2 cut(s) | 6763, 6976 |
| BsaI | GGTCTC | 4 cut(s) | 3307, 4146, 7276, 7954 |
| BsaWI | WCCGGW | 4 cut(s) | 774, 960, 6008, 7831 |
| Bse118I | RCCGGY | 4 cut(s) | 4458, 6008, 6739, 9524 |
| Bse21I | CCTNAGG | 4 cut(s) | 336, 2432, 8582, 9676 |
| Bse8I | GATNNNNATC | 6 cut(s) | 1290, 6108, 6148, 7827, 8695, 9882 |
| BseAI | TCCGGA | 1 cut(s) | 7831 |
| BseJI | GATNNNNATC | 6 cut(s) | 1290, 6108, 6148, 7827, 8695, 9882 |
| BseRI | GAGGAG | 9 cut(s) | 764, 2416, 3965, 4076, 6506, 6638, 7757, 8856, 10946 |
| BseSI | GKGCMC | 7 cut(s) | 1057, 3805, 3985, 5294, 5569, 10081, 10801 |
| BseYI | CCCAGC | 5 cut(s) | 465, 1571, 2583, 3097, 4751 |
| BsgI | GTGCAG | 7 cut(s) | 354, 383, 2388, 6171, 7062, 7512, 10857 |
| Bsh1236I | CGCG | 6 cut(s) | 3625, 3627, 8194, 8283, 9817, 10231 |
| Bsh1285I | CGRYCG | 3 cut(s) | 2893, 4459, 9959 |
| BshNI | GGYRCC | 5 cut(s) | 760, 5435, 6975, 10766, 10777 |
| BshTI | ACCGGT | 1 cut(s) | 6008 |
| BsiEI | CGRYCG | 3 cut(s) | 2893, 4459, 9959 |
| BsiHKCI | CYCGRG | 4 cut(s) | 65, 4974, 6026, 7545 |
| BsiWI | CGTACG | 1 cut(s) | 10845 |
| BslFI | GGGAC | 6 cut(s) | 2450, 6157, 7060, 8926, 9389, 9666 |
| BsmFI | GGGAC | 6 cut(s) | 2450, 6157, 7060, 8926, 9389, 9666 |
| BsmI | GAATGC | 7 cut(s) | 631, 2417, 3194, 3463, 4915, 6820, 7524 |
| Bso31I | GGTCTC | 4 cut(s) | 3307, 4146, 7276, 7954 |
| BsoBI | CYCGRG | 4 cut(s) | 65, 4974, 6026, 7545 |
| Bsp119I | TTCGAA | 2 cut(s) | 2933, 9134 |
| Bsp120I | GGGCCC | 1 cut(s) | 5565 |
| Bsp13I | TCCGGA | 1 cut(s) | 7831 |
| Bsp1407I | TGTACA | 2 cut(s) | 840, 7306 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 1020, 7803, 8430, 9413 |
| Bsp19I | CCATGG | 3 cut(s) | 2367, 3438, 6979 |
| BspEI | TCCGGA | 1 cut(s) | 7831 |
| BspFNI | CGCG | 6 cut(s) | 3625, 3627, 8194, 8283, 9817, 10231 |
| BspHI | TCATGA | 7 cut(s) | 895, 1045, 5203, 6391, 6556, 7480, 10273 |
| BspMAI | CTGCAG | 5 cut(s) | 2173, 4122, 4698, 8316, 9279 |
| BspMI | ACCTGC | 5 cut(s) | 1624, 4459, 6534, 8041, 10010 |
| BspOI | GCTAGC | 4 cut(s) | 1028, 3519, 3590, 5712 |
| BspQI | GCTCTTC | 5 cut(s) | 1962, 2685, 2769, 3416, 7740 |
| BspT104I | TTCGAA | 2 cut(s) | 2933, 9134 |
| BspT107I | GGYRCC | 5 cut(s) | 760, 5435, 6975, 10766, 10777 |
| BspTNI | GGTCTC | 4 cut(s) | 3307, 4146, 7276, 7954 |
| BsrBI | CCGCTC | 1 cut(s) | 1051 |
| BsrFI | RCCGGY | 4 cut(s) | 4458, 6008, 6739, 9524 |
| BsrGI | TGTACA | 2 cut(s) | 840, 7306 |
| BssAI | RCCGGY | 4 cut(s) | 4458, 6008, 6739, 9524 |
| BssNAI | GTATAC | 1 cut(s) | 936 |
| BssNI | GRCGYC | 2 cut(s) | 6763, 6976 |
| BssSI | CACGAG | 5 cut(s) | 807, 3978, 4326, 9054, 10955 |
| Bst1107I | GTATAC | 1 cut(s) | 936 |
| Bst2BI | CACGAG | 5 cut(s) | 807, 3978, 4326, 9054, 10955 |
| BstACI | GRCGYC | 2 cut(s) | 6763, 6976 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 852, 1007, 5459 |
| BstAUI | TGTACA | 2 cut(s) | 840, 7306 |
| BstBAI | YACGTR | 4 cut(s) | 1563, 8063, 8480, 8633 |
| BstBI | TTCGAA | 2 cut(s) | 2933, 9134 |
| BstDSI | CCRYGG | 3 cut(s) | 2367, 3438, 6979 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 2431, 8194, 10785 |
| BstFNI | CGCG | 6 cut(s) | 3625, 3627, 8194, 8283, 9817, 10231 |
| BstH2I | RGCGCY | 3 cut(s) | 6979, 7790, 10857 |
| BstHHI | GCGC | 8 cut(s) | 1591, 1980, 3627, 6774, 6978, 7789, 9033, 10856 |
| BstMCI | CGRYCG | 3 cut(s) | 2893, 4459, 9959 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2889, 6853 |
| BstSFI | CTRYAG | 8 cut(s) | 1415, 2169, 4118, 4694, 7158, 7290, 8312, 9275 |
| BstSLI | GKGCMC | 7 cut(s) | 1057, 3805, 3985, 5294, 5569, 10081, 10801 |
| BstSNI | TACGTA | 1 cut(s) | 1563 |
| BstUI | CGCG | 6 cut(s) | 3625, 3627, 8194, 8283, 9817, 10231 |
| BstXI | CCANNNNNNTGG | 6 cut(s) | 1855, 2972, 3997, 4184, 6230, 7022 |
| BstZ17I | GTATAC | 1 cut(s) | 936 |
| Bsu36I | CCTNAGG | 4 cut(s) | 336, 2432, 8582, 9676 |
| BsuI | GTATCC | 4 cut(s) | 5253, 8118, 10664, 10920 |
| BtgI | CCRYGG | 3 cut(s) | 2367, 3438, 6979 |
| BtgZI | GCGATG | 3 cut(s) | 1974, 3642, 10356 |
| BtsI | GCAGTG | 6 cut(s) | 782, 1968, 5656, 7050, 9044, 9515 |
| BveI | ACCTGC | 5 cut(s) | 1624, 4459, 6534, 8041, 10010 |
| CciI | TCATGA | 7 cut(s) | 895, 1045, 5203, 6391, 6556, 7480, 10273 |
| CfoI | GCGC | 8 cut(s) | 1591, 1980, 3627, 6774, 6978, 7789, 9033, 10856 |
| Cfr10I | RCCGGY | 4 cut(s) | 4458, 6008, 6739, 9524 |
| CseI | GACGC | 5 cut(s) | 493, 3174, 4325, 6752, 7703 |
| CsiI | ACCWGGT | 1 cut(s) | 3540 |
| CspAI | ACCGGT | 1 cut(s) | 6008 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 1944, 1979, 3150, 3185, 3894, 3929, 7113, 7148 |
| DinI | GGCGCC | 1 cut(s) | 6977 |
| DraI | TTTAAA | 3 cut(s) | 1378, 5166, 10306 |
| DraIII | CACNNNGTG | 2 cut(s) | 5651, 7529 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 157 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3261 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 157 |
| EaeI | YGGCCR | 4 cut(s) | 5819, 9661, 10204, 10438 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3261 |
| EciI | GGCGGA | 2 cut(s) | 4820, 8530 |
| Ecl136II | GAGCTC | 3 cut(s) | 772, 1019, 8234 |
| Eco105I | TACGTA | 1 cut(s) | 1563 |
| Eco147I | AGGCCT | 2 cut(s) | 5041, 7192 |
| Eco24I | GRGCYC | 7 cut(s) | 774, 1021, 3427, 5569, 8236, 8436, 9847 |
| Eco31I | GGTCTC | 4 cut(s) | 3307, 4146, 7276, 7954 |
| Eco32I | GATATC | 2 cut(s) | 7861, 8693 |
| Eco47III | AGCGCT | 1 cut(s) | 10855 |
| Eco53kI | GAGCTC | 3 cut(s) | 772, 1019, 8234 |
| Eco72I | CACGTG | 2 cut(s) | 8480, 8633 |
| Eco81I | CCTNAGG | 4 cut(s) | 336, 2432, 8582, 9676 |
| Eco88I | CYCGRG | 4 cut(s) | 65, 4974, 6026, 7545 |
| EcoICRI | GAGCTC | 3 cut(s) | 772, 1019, 8234 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 2431, 8194, 10785 |
| EcoO109I | RGGNCCY | 8 cut(s) | 2481, 3027, 3649, 5565, 5566, 5582, 9599, 9680 |
| EcoRI | GAATTC | 6 cut(s) | 1576, 2248, 4486, 7576, 7636, 7835 |
| EcoRV | GATATC | 2 cut(s) | 7861, 8693 |
| EcoT22I | ATGCAT | 5 cut(s) | 1759, 4686, 7335, 9079, 10537 |
| EcoT38I | GRGCYC | 7 cut(s) | 774, 1021, 3427, 5569, 8236, 8436, 9847 |
| EgeI | GGCGCC | 1 cut(s) | 6977 |
| EheI | GGCGCC | 1 cut(s) | 6977 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 140, 172, 990, 1022, 1173, 1205, 6390, 6422 |
| FaqI | GGGAC | 6 cut(s) | 2450, 6157, 7060, 8926, 9389, 9666 |
| FauI | CCCGC | 7 cut(s) | 1044, 1081, 3825, 4946, 6879, 9834, 10687 |
| FauNDI | CATATG | 1 cut(s) | 690 |
| FbaI | TGATCA | 7 cut(s) | 6103, 6544, 6553, 8413, 9877, 10611, 10858 |
| FblI | GTMKAC | 3 cut(s) | 935, 3127, 3304 |
| FriOI | GRGCYC | 7 cut(s) | 774, 1021, 3427, 5569, 8236, 8436, 9847 |
| GlaI | GCGC | 8 cut(s) | 1590, 1979, 3626, 6773, 6977, 7788, 9032, 10855 |
| GsaI | CCCAGC | 5 cut(s) | 469, 1575, 2587, 3101, 4755 |
| GsuI | CTGGAG | 6 cut(s) | 634, 1106, 3329, 3781, 6668, 7839 |
| HaeII | RGCGCY | 3 cut(s) | 6979, 7790, 10857 |
| HgaI | GACGC | 5 cut(s) | 493, 3174, 4325, 6752, 7703 |
| HhaI | GCGC | 8 cut(s) | 1591, 1980, 3627, 6774, 6978, 7789, 9033, 10856 |
| Hin1I | GRCGYC | 2 cut(s) | 6763, 6976 |
| Hin6I | GCGC | 8 cut(s) | 1589, 1978, 3625, 6772, 6976, 7787, 9031, 10854 |
| HinP1I | GCGC | 8 cut(s) | 1589, 1978, 3625, 6772, 6976, 7787, 9031, 10854 |
| HincII | GTYRAC | 8 cut(s) | 41, 1897, 3128, 5023, 5800, 7928, 8245, 10506 |
| HindII | GTYRAC | 8 cut(s) | 41, 1897, 3128, 5023, 5800, 7928, 8245, 10506 |
| HindIII | AAGCTT | 9 cut(s) | 1340, 1533, 2303, 2451, 4112, 5483, 5910, 8318, 9480 |
| HpaI | GTTAAC | 1 cut(s) | 10506 |
| Hpy99I | CGWCG | 4 cut(s) | 59, 3129, 3132, 6868 |
| HpyCH4IV | ACGT | 8 cut(s) | 1562, 3548, 4414, 6672, 8062, 8479, 8632, 9206 |
| HpySE526I | ACGT | 8 cut(s) | 1562, 3548, 4414, 6672, 8062, 8479, 8632, 9206 |
| Hsp92I | GRCGYC | 2 cut(s) | 6763, 6976 |
| HspAI | GCGC | 8 cut(s) | 1589, 1978, 3625, 6772, 6976, 7787, 9031, 10854 |
| KasI | GGCGCC | 1 cut(s) | 6975 |
| Kpn2I | TCCGGA | 1 cut(s) | 7831 |
| KpnI | GGTACC | 2 cut(s) | 764, 5439 |
| KroI | GCCGGC | 1 cut(s) | 9524 |
| KroNI | GCCGGC | 1 cut(s) | 9526 |
| Ksp22I | TGATCA | 7 cut(s) | 6103, 6544, 6553, 8413, 9877, 10611, 10858 |
| KspAI | GTTAAC | 1 cut(s) | 10506 |
| LguI | GCTCTTC | 5 cut(s) | 1962, 2685, 2769, 3416, 7740 |
| MabI | ACCWGGT | 1 cut(s) | 3540 |
| MaeII | ACGT | 8 cut(s) | 1562, 3548, 4414, 6672, 8062, 8479, 8632, 9206 |
| MbiI | CCGCTC | 1 cut(s) | 1051 |
| MfeI | CAATTG | 5 cut(s) | 3404, 3846, 7079, 7254, 7710 |
| MlsI | TGGCCA | 2 cut(s) | 9663, 10206 |
| MluNI | TGGCCA | 2 cut(s) | 9663, 10206 |
| Mly113I | GGCGCC | 1 cut(s) | 6976 |
| Mox20I | TGGCCA | 2 cut(s) | 9663, 10206 |
| Mph1103I | ATGCAT | 5 cut(s) | 1759, 4686, 7335, 9079, 10537 |
| MroI | TCCGGA | 1 cut(s) | 7831 |
| MroNI | GCCGGC | 1 cut(s) | 9524 |
| MscI | TGGCCA | 2 cut(s) | 9663, 10206 |
| Msp20I | TGGCCA | 2 cut(s) | 9663, 10206 |
| MspA1I | CMGCKG | 3 cut(s) | 2168, 7376, 8311 |
| MunI | CAATTG | 5 cut(s) | 3404, 3846, 7079, 7254, 7710 |
| Mva1269I | GAATGC | 7 cut(s) | 631, 2417, 3194, 3463, 4915, 6820, 7524 |
| MvnI | CGCG | 6 cut(s) | 3625, 3627, 8194, 8283, 9817, 10231 |
| NaeI | GCCGGC | 1 cut(s) | 9526 |
| NarI | GGCGCC | 1 cut(s) | 6976 |
| NciI | CCSGG | 4 cut(s) | 1433, 7646, 8142, 8829 |
| NcoI | CCATGG | 3 cut(s) | 2367, 3438, 6979 |
| NdeI | CATATG | 1 cut(s) | 690 |
| NgoMIV | GCCGGC | 1 cut(s) | 9524 |
| NheI | GCTAGC | 4 cut(s) | 1024, 3515, 3586, 5708 |
| NmeAIII | GCCGAG | 1 cut(s) | 8491 |
| NsiI | ATGCAT | 5 cut(s) | 1759, 4686, 7335, 9079, 10537 |
| NspV | TTCGAA | 2 cut(s) | 2933, 9134 |
| OliI | CACNNNNGTG | 2 cut(s) | 405, 8631 |
| PaeI | GCATGC | 6 cut(s) | 227, 3224, 4688, 7333, 8264, 9955 |
| PaeR7I | CTCGAG | 2 cut(s) | 6026, 7545 |
| PagI | TCATGA | 7 cut(s) | 895, 1045, 5203, 6391, 6556, 7480, 10273 |
| PaqCI | CACCTGC | 4 cut(s) | 4459, 6534, 8041, 10010 |
| PceI | AGGCCT | 2 cut(s) | 5041, 7192 |
| PciI | ACATGT | 5 cut(s) | 1808, 2258, 6046, 7320, 8055 |
| PciSI | GCTCTTC | 5 cut(s) | 1962, 2685, 2769, 3416, 7740 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 814, 6477 |
| PctI | GAATGC | 7 cut(s) | 631, 2417, 3194, 3463, 4915, 6820, 7524 |
| PdiI | GCCGGC | 1 cut(s) | 9526 |
| Pfl23II | CGTACG | 1 cut(s) | 10845 |
| PflFI | GACNNNGTC | 1 cut(s) | 7946 |
| PflMI | CCANNNNNTGG | 7 cut(s) | 3661, 5719, 5971, 6154, 8969, 9602, 10213 |
| PinAI | ACCGGT | 1 cut(s) | 6008 |
| Ple19I | CGATCG | 1 cut(s) | 9959 |
| PluTI | GGCGCC | 1 cut(s) | 6979 |
| PmaCI | CACGTG | 2 cut(s) | 8480, 8633 |
| PmlI | CACGTG | 2 cut(s) | 8480, 8633 |
| Ppu21I | YACGTR | 4 cut(s) | 1563, 8063, 8480, 8633 |
| PpuMI | RGGWCCY | 5 cut(s) | 2481, 3027, 3649, 5582, 9680 |
| PscI | ACATGT | 5 cut(s) | 1808, 2258, 6046, 7320, 8055 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2889, 6853 |
| PsiI | TTATAA | 1 cut(s) | 8085 |
| Psp124BI | GAGCTC | 3 cut(s) | 774, 1021, 8236 |
| Psp1406I | AACGTT | 1 cut(s) | 6672 |
| Psp5II | RGGWCCY | 5 cut(s) | 2481, 3027, 3649, 5582, 9680 |
| PspCI | CACGTG | 2 cut(s) | 8480, 8633 |
| PspFI | CCCAGC | 5 cut(s) | 465, 1571, 2583, 3097, 4751 |
| PspLI | CGTACG | 1 cut(s) | 10845 |
| PspOMI | GGGCCC | 1 cut(s) | 5565 |
| PspPPI | RGGWCCY | 5 cut(s) | 2481, 3027, 3649, 5582, 9680 |
| PspXI | VCTCGAGB | 1 cut(s) | 7545 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1767, 1799 |
| PstI | CTGCAG | 5 cut(s) | 2173, 4122, 4698, 8316, 9279 |
| PsyI | GACNNNGTC | 1 cut(s) | 7946 |
| PvuI | CGATCG | 1 cut(s) | 9959 |
| PvuII | CAGCTG | 3 cut(s) | 2168, 7376, 8311 |
| SacI | GAGCTC | 3 cut(s) | 774, 1021, 8236 |
| SalI | GTCGAC | 1 cut(s) | 3126 |
| SapI | GCTCTTC | 5 cut(s) | 1962, 2685, 2769, 3416, 7740 |
| ScaI | AGTACT | 3 cut(s) | 231, 2002, 2095 |
| SexAI | ACCWGGT | 1 cut(s) | 3540 |
| SfcI | CTRYAG | 8 cut(s) | 1415, 2169, 4118, 4694, 7158, 7290, 8312, 9275 |
| SfoI | GGCGCC | 1 cut(s) | 6977 |
| Sfr274I | CTCGAG | 2 cut(s) | 6026, 7545 |
| SfuI | TTCGAA | 2 cut(s) | 2933, 9134 |
| SgrDI | CGTCGACG | 1 cut(s) | 3126 |
| SlaI | CTCGAG | 2 cut(s) | 6026, 7545 |
| SmiI | ATTTAAAT | 1 cut(s) | 5166 |
| SmlI | CTYRAG | 9 cut(s) | 1063, 1486, 6026, 7058, 7545, 9407, 10313, 10325, 10928 |
| SmoI | CTYRAG | 9 cut(s) | 1063, 1486, 6026, 7058, 7545, 9407, 10313, 10325, 10928 |
| SnaBI | TACGTA | 1 cut(s) | 1563 |
| SpeI | ACTAGT | 2 cut(s) | 373, 2227 |
| SphI | GCATGC | 6 cut(s) | 227, 3224, 4688, 7333, 8264, 9955 |
| SseBI | AGGCCT | 2 cut(s) | 5041, 7192 |
| SspDI | GGCGCC | 1 cut(s) | 6975 |
| SspI | AATATT | 6 cut(s) | 3613, 4813, 5610, 6952, 7222, 10664 |
| SstI | GAGCTC | 3 cut(s) | 774, 1021, 8236 |
| StuI | AGGCCT | 2 cut(s) | 5041, 7192 |
| SwaI | ATTTAAAT | 1 cut(s) | 5166 |
| TaiI | ACGT | 8 cut(s) | 1565, 3551, 4417, 6675, 8065, 8482, 8635, 9209 |
| TaqII | GACCGA | 1 cut(s) | 2879 |
| TauI | GCSGC | 4 cut(s) | 121, 7243, 9389, 9470 |
| TspGWI | ACGGA | 5 cut(s) | 806, 3461, 7333, 8261, 9752 |
| Tth111I | GACNNNGTC | 1 cut(s) | 7946 |
| Van91I | CCANNNNNTGG | 7 cut(s) | 3661, 5719, 5971, 6154, 8969, 9602, 10213 |
| VneI | GTGCAC | 3 cut(s) | 3981, 5290, 10797 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 2431, 8194, 10785 |
| XbaI | TCTAGA | 3 cut(s) | 2683, 2860, 5278 |
| XcmI | CCANNNNNNNNNTGG | 6 cut(s) | 2701, 4388, 6230, 6278, 7022, 7409 |
| XhoI | CTCGAG | 2 cut(s) | 6026, 7545 |
| XmaJI | CCTAGG | 2 cut(s) | 2498, 6875 |
| XmiI | GTMKAC | 3 cut(s) | 935, 3127, 3304 |
| ZrmI | AGTACT | 3 cut(s) | 231, 2002, 2095 |
| Zsp2I | ATGCAT | 5 cut(s) | 1759, 4686, 7335, 9079, 10537 |