Rh7AG440400

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0012629
Physical Location & Seq
Forward (+)
59637063 .. 59652644
15582 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG440400.1

Sequence Viewer

Length: 10947 bp
ATGTACTTAGGGTTTGACAATCAGGAATCTATGTCTCCTAAGATCAAAGCCTTTATCAATAAGGTGATACAGTGTCCATTACAGGATATAGCTATTCCTCTTTCCGGTTTCCGCTGGGAGTACAGTAAGGGTAATTTCAACCATTGGAGGCCGCTTTTTCTGCATTTCGATACATATTTCAAGACATACTTGTCTGGTAGAAATGACCTACTCTTGTCCGATAAAATCTTAGAAGATGATACTCCATTCCCAAAACATGCAGTACTACAAATTTTGAGAGTGATGCAAACAATTTTAGAGAATTGCCATAACAAGAGTTCTTTTGATGGCTTAGAGCATTTCAAGCTGCTACTTGCATCCACAGATCCAGAAGTTCTTATAGCAACACTAGAAACACTTTCTGCGCTTGTGAAAATATATCCCTCTAAGATGCATGTCAGTGGAAAGATGATCGGCTGTGGTTCTGTAAACAGCTATCTCCTGTCGCTTGCACAGGGCTGGGGAAGCAAGGAAGAAGGGTTGGGTCTATTTTCATGTGTCATGGCAAACGAGACTGCCCAAGATGATGGGCTGAATTTGTTCCCATCTGATGTAGAAAATGATTCTGACAAATCTCAGCATCGAATAGGTTCTACCCTTTATTTTGAATTGCATGGGAATGCCCAAAGTACAGAGGAGAGCAGTAGCAATGTAAATAGTACTTCCAGTTTGGGGGTTATAAACATGCCAGATCTGCATTTGCAGAAGGAGGATGATTTAAAGCTGATGAAACAGTGCACAGAGGACTACAGGGTACCTCCTGAGATTCGGTTCTCACTCCTGACAAGAATCAGATATGCTCGTGCCTTCCGTTCACCAAGAATCTGCAGGTTGTACAGCAGGATTTGCCTTCTTGCATTTATTGTGCTTGTTCAATCTAGTGATGCACATGAAGAACTTGTATCATTCTTTGCTAATGAGCCAGAATATACTAATGAACTGATTAGAATTGTGCGGTCGGAAGAATCAGTTTCTGGAACCATCAGAACACATGCAATGCTTGCCTTGGGGGCTCAATTAGCTGCTTATTCTGCATCTCATGAGCGGGCACGAATTTTGAGTGGATCTAGTATCAGTTTTGCAGGAGGGAATCGTATGATACTTCTGAATGTACTCCAGAGAGCAGTTTTATCACTTAAAACCTCCAATGATCCAACTTCTCTTGCTTTTGTTGAAGCTCTGCTTCAGTTCTATTTGCTCCATGTGGTTTCATCGTCCACTACAGGGAGTAATATTAGAGGGTCAGGCATGGTTCCAACATTCTTGCCTCTTTTGGAGGATTCTGATCCCTTGCACTTGCATCTAGTCTGTTTTGCTGTGAAAACTCTGCAAAAGCTCATGGATTACAGTAGTTCAGCTGTGTCTCTCTTTAAAGAGTTAGGGGGAGTTGAACTGTTGGCTCAGAGACTACAGATAGAGGTACATAGGGTGATAGGTTTGGTCGGCGATAATGATAATTCAATGGTCATTGGTGAAAGCTCCAGATATAATGAAGACCAGTTGTACTCCCAGAAGAGGCTCATTAAAGCTTCGTTGAAGGCACTTGGGTCTGCTTCATATGCTGCTGGCAATTCTACCAGATCTCAGCATCCTCATGACAGTTCTTTACCTGAAACTCTTTCTCTGATCTTTGGGAACGTTGATAAGTTTGGAGGTGACATTTATCACTCTGCTGTGACAGTTCTGAGTGAAACGATACACAAAGACCCAACTTGTTATTCTGCTTTGCACGATATGGGTCTTCCAGATGCTTTCATATCTTCAGTTGTAGCTGGGGTTCTTCCATCTGCAAAGGCACTTCAGTGTGTGCCTAATGGTCTCGGTGCTATATGTCTTAACGCCAAAGGCTTGGAGGCTGTGAAGGAAAAGTTGGCCTTACGATTTCTTGTTGACATCTTCACCAGCAAGAAGTATGTAGTAGCAATGAATGGAGCTATCGTCCATTTGACAAATGCTGTGGAAGAGCTTTTGCGCCATGTATCTTCGCTAAGAAGTATTGGTGTTGATATTATGATTGAAATTGTTGAAAAAATTGCTTCCTTCACTGACAACAACAATGCAGGGCTAGCAGGAAAGGCTAGTGGGAGTGGGAGTACTGCTATGGAAATGGATTCTGAAGACAAGGAACAGCCTTTGGTAGGTGCTGTAGATTCGGCTGCAGATGGTATCAGTAATGATCAGTTCATTCAATTATCCATTTTCCATTTGATGGTACTGGTCCACAGAACAATGGAGAATGCTGAAATATGTCGGTTATTTGTTGAAAAGTCTGGAATTGATGCTTTACTGAAGCTTTTGTTACAGCCAGCTGTTGTACAATCATCTGATGGAATGTCTATTGCTCTACATAGCACCATGGTTTTCAAAGATTTCACCCAAAATCACTCTGCTGCACTTGCCCGTGCATTTTGCTCTTCCCTTAGGGGCCACCTAAAGAAAGCTTTGTCGGAATTTGGTGCGGCTTCAGGGTCTTTCTTACTGGAACCTAAGATGACTTCAGATGGTGGGATCTTTCCTTCACTGTTTCTCGTTGAGTTCCTGTTGTTTATTGCTGCCTCAAAGGAAAACCGCTGGGTAACTGCTTTGCTTACAGAACTTGGAAATGATAGCAAGGATGTTCTGGAAGATATTGGGCGTGTCCATCGGGAAGTTCTATGGCAGATTGCTCTTCTAGAAGATACCAAGTCTGAAATGGAGGATGAAAGTGCTGGTTCTACCACTGAGTCGCAACAGTCAGAAATGAATGCAAGTGATTCTGAAGAGCAAAGGTTCAACTCTTTTAGGCAGTTTCTTGATCCATTGATGAGAAGAAGGCAATCTGGATGGAGCATTGAATCGCAATTTCTTGATCTTATTAACCTGTATCGTGATCTCGGTCGCGCCACTAGTTCTCAAAGAACACATTCTGATGGTCCGTCAAATCTGCGGATAGGATCTAGTCATCATTCTGGTTCTTCAGATGCTGGTAGAAGGGAGTATGACCAGCAGAGCTCCTACTATACTTCTTGCTGTGACATGGTAAGATCACTTTCTTTTGACATAAGTCATTTGTTTCAAGAGCTGGGAAAGGTCATGTACCAACCTTCTCGTCGACGGGATGATATTGTGAATGTTTCCGCTGCTGCAAAATCCGTGGCTTCTACATTTGCATCTATTGCATTGGATCACATGAGTTTTGGGGGGCATGCAAGTTTTTCTGGATCTGAGGTGTCTATATCAGCAAAATGTCGTTACTTTGGTAAAGTTATTGATTTCATTGATGTCAGTCTACTGGAGAGACCAGATTCATGTAACTCTGTTTTCCTCAATTGCTTGTATGGACATGGAGTTATACAGTCAATTTTAACGACATTTGAAGCTACCAGTCAATTGCTCTTCACAGTAAATAGGGCTCCTGCATCTCCCATGGAAACTGATGATGGAAACTCAAAGCAGGATGAAAGGGAAGACACTGACCATTCATGGATTTATGGTCCGTTAGCTAGTTATGGAAAACTTATGGACCACCTGGTAACATCGTCTTTCATATTATCTCCTTTTACAAAACAGTTGCTTGCACAGCCCCTTGCAAATGGAACAATTCCTTTTCCACGCGATGCTGAGACCTTTGTAAAGGTCCTCCAATCCATGGTGCTGAAGGCAGTGCTTCCTGTCTGGACTCATCCCCAATTTGTCGATTGTAGTTATGATTTTATTACTACAGTTATTTCTATAATCAGGCACATATACTCTGGGGTTGAAGTAAAGAATGTCAGTAGCAGTTCCAGTGCTCGTATTGCTGGTCCCCCTCCTAATGAGACAACTATATCAACGATTGTAGAGATGGGCTTCTCCAGGTCTAGGGCAGAAGAAGCTTTGAGACAGGTTGGATCCAATAGTGTGGAGTTGGCTATGGAGTGGTTGTGCTCCCATCAAGAGGAAGTTCAAGAAGACGATGAACTTGCTCGTGCACTTGCCATGTCTTTGGGTAATTCAGAGTCTGACACTAAGGAAGCTGGTGCAATGGAAAGTGCGCCGGAAGAAGAAAAGGTTCAACTTCCTCCTGTTGAGGAGTTGTTGTCTACATGCACAAAGCTTCTGCAGATGAAGGAACCTCTAGCTTTTCCAGTGCGAGACCTGCTTGTGATGATATGCTCCCAAAATGACGGTCAATGTAGGCCTAATATCATATCATTCATTGTTGATCGCGTCAAAGAATCTAGTTTGAATTCTGACAGTGGAAACAGTAACTTGCTATCCGCTCTTTTTCATGTTCTTGCTTTAATTCTTCATGAAGATGCAGTTGCAAGAGAAATAGCCTCGAAGAATGGATTTGTGAAAATAGCTTCAGATCTACTTTCGCAATGGGACTCTAGTTCAACTGGCATAGCAAAACGAGAAGTGCCCAAGTGGGTAACTACAGCTTTTCTTGCAATAGATCGGCTGTTGCAGGTGGATCAAAAATTGAATTCTGAAATTGCTGAGCAGTTGAAGAGAGATGCTGTTAGTAGCCAGCAAACATCTATTAGCATTGATGAGGACAAGCAAAATAAGTTGCAGTCTGCATTGGGATTATCTTCAAAGCACATAGAAATTAAGGAGCAGAAGAGGCTTATTGAGATTGCTTGTTCATGTATCAGGAATCAGCTTCCTTCTGACACAATGCATGCAGTTCTGCAGCTGTGCTCTACCCTCACCAAAACACATACAGTTGCTGTTAGTTTTCTTGATGCTGGGGGTTTAAGTTTGCTACTCTCTTTGCCAACAAGTAGTCTATTTTCTGGTTTTGACAATATTGCTGCAACCATTATCCGTCATGTTCTTGAGGATCCTCAAACCCTTCAGCAGGCAATGGAATTTGAAATAAGGCACAATCTTGTGGCTGCTGCCAACAGACATTCAAATGGAAGGGTTTCTCCCCGCAATTTTCTAGCAAGTTTAAGTTCTGCCATTTCCAGGGATCCAGTGATATTCATGCGTGCTGCTCAGTCTATTTGTCAAGTGGAGATGGTTGGTGAGAGGCCTTGCATTGTTTTGTTGAAAGATCGTGACAAAGATAAAACCAAAGAGAAAGAAAAAGAGAAGGATAAATCTTTGGACAAGGAGAAAACACATATTTCCGATGGGAAAACTGCTCTGGGTAATACAAATCCAGTACCTTCTGGCAATGCACAAGGCAAGGCTCATGATTCAAACTCAAAGAGTGGTAAAGTTCATCGCAAATATCCCCAGAGTTTTGTGAGTGTGATTGAGCTTCTTCTAGATTCTGTGTATACTTATGTTCCTCCTTCAAAAGACAGTCGTGTTGTTGATGTGCTCCATGATACCCCTTCATCGACTGACATGGACATTGATGTTGCTGCTTTCAAAGGAAAAGGAAAAGCTATTGCCTCATCTTCTGAAGATGGTGGAGCTGGTGCCCAAGAAGCTTCTGCATCACTTGCAAAGGTTGTTTTTATTTTGAAGCTTCTGACGGAGATTCTAGCAATGTATGCTTCATCTGCCCATGTTCTACTTCGGAAAGACGCTGAAATTAGTAGTTGCAGGAACCCTAATCCAAAGGGTTCTACTGCTGTATGCACTGGTGGAATATTTCACCATGTTCTTCACAAGTTTATTCCATATTCGCGGAGTGCCAAGAAGGAAAAGAAAACAGATGGTGATTGGAAGCACAAGTTAGCAAGCAGGGCGAGCCAGTTTTTGGTTGCATCATGTGTTCGTTCTTCCGAGGCGAGGAAGAGGATTTTTACAGAGATCAGTTATATTTTCAATGACTTTGTGGACTCATGTAATGGCTTTCGACCACCTGAAAATGACATACAAGCTTTTGCTGATCTGCTTAATGATGTTCTGGCTGCTCGGACTCCTACTGGTTCATACATCTCCGCAGAAGCGTCTGCTACTTTTATAGATGTTGGTCTGGTTGGATCATTGACTCGAACCCTCCAAGTGCTTGACCTGGACCATGCTGACTCGCCTAAAGTTGTTACAGGTCTGATCAAAGCTCTAGAACTGGTAACCAAAGAACATGTCCATTTGGCTGATTCAACTGCTGGTAAGGGCGACAGTTCTACAAAACCTCCTGATCAGTCTGGCAGGACAGATAATGTTGACGGTGGATCCCAGTCCATGGAGACACCATCCCAATCCCATCACAATTCTGCTCCAGCTGAGCGCACGGAGTCTTTTAATGCTGTCCAATCTTATGGTGGTTCTGAGGCTGTCACAGATGATATGGAACATGACCAAGATCTTGAAGGACGTTTTGCTGCTGCTAATGAAGATGAGTATATGCATGAAATTTCAGAGGATACTCGGGGTCTGGAAAACGGCATTGATACAATGGGTATACGGTTTGAAATTCAGCCTCATGAGCAAGAAAATCTTGAGGATGATGATGAGGATGATGAAGATATGTCTGAGGATGATGGAGATGAAGTGGATGATGATGAAGATGAAGATGATGAGGAGCACAATGATCTGGAAGATGAAGTCCATCACTTGCCACATCCTGACACTGATCAAGATGATCATGAGATTGATGACGAAGAGTTTGATGAAGAAGTATTAGAAGAAGATGATGAGGATGAGGAGGATGAGGAGGATGGAGTTATACTGAGGCTGGAGGAAGGCATAAATGGGATTAATGTTTTTGACCATATTGAGGTTTTTGGAAGAGAGCATGGTTTCCCTAATGAAACACTTCATGTGATGCCAGTGGAAGTTTTTGGGTCCAGACGTCAAGGGCGCACTACTTCTATTTACAGTCTTTTGGGCAGAACAGGTGAGAATGCGGCTCCATCAAGGCATCCTCTTTTGGTTGGACCTTTGTCTCTGCATTCGGCCCCTCCTAGGCAACCAGAAAATTCTCGTGATGGCATCATACCAGATAGGAACTCTGAGATCACCTCATCAAGATTGGACAGTATTTTCCGATCATTGAGGAATGGGCGCCATGGACACCGTCTGAACTTGTGGATGGATGATAACCAGCAAGGTGGTGGATCAAATGCCGGTGTAGTACCCCAAGGACTTGAGGAGTTGCTTGTTTCCCAATTGAGGCGACCAACACCCGAAAAGACTTCTGAAGAGAATACGACACCAGTAGATTCTCAGAACAAAGAAGTAGTTGAGTTGCAAGAACCGGATGCAGCTGTAAGGCCTGAAATGCCTGTTGAAAATGATATAAATAATGATAGTGCTAATGTGCCCCCTGCTGATACAATGGTCAACTCTGGCAATACTGATTTGGTAACACCAACAGCAAGTGAATCTTTACAAGCAATGGACATGTCTAGCACACATCCACAGTCTGTTGAGATGCAGTTTGAACACACTGATGCAGCTGTGCGGGATGTAGAAGCTGTGAGCCAAGAAAGTGGTGGAAGTGGAGCAACTTTAGGGGAGAGCCTTCGTAGCCTTGATGTTGAAATTGGGAGTGCTGATGGTCATGATGATGGTGCAGATAGGCAAGGATCCTCAGATAGAATGCCACTTGGTGATTCTCAGGCGACTCGAGCGAGGAGAACGAACATATCTTTTGGGAATTCTGCATCTGCAAATGCAAGAGATGTTTCACTTCATAGTGTAACTGAGGTTTCAGAAAATTCTAGCCGGGAAGCAGATCAGGATGGTCCAGCAGCAGAACAGCAACTTAATAGTGATGCTGGTTCTGGGGCAATTGATCCTGCTTTCTTGGATGCTCTTCCTGAGGAGTTGCGAGCTGAAGTCCTCTCTGCACAACAGGGTCAAGTAGCTCCACAGTCAGCCTCTGAGCCACAAAATGCTGGTGATATTGATCCAGAATTCCTTGCTGCCCTTCCCCCAGATATCAGGGCTGAAGTGTTAGCTCAACAGCAAGCCCAAAGGGTACATCAGTCTCAGGAACTGGAAGGTCAACCAGTTGAAATGGACACTGTTTCAATAATTGCAACCTTTCCTTCAGAATTGAGAGAAGAGGTTCTGTTAACTTCATCTGATGCTATACTTGCCAATCTTACACCGGCTCTAGTTGCGGAGGCAAACATGTTGCGCGAAAGATTTGCCAATAGTTATAATCGTACCCTATTTGGTATGTATCCTAGAAACCGTAGGGGTGAGGCGTCAAGACCTGGCATTGGATCCAGCCTGGACAGAATCGGTGGAGGCCTTGCCTCACGTAGGCCTATAGGTGCTAAGGTAGTTGAAGCTGAAGGAGCTCCTTTAGTCGATGCAGAAGCTCTGCATGCAATGATTCGAGTGCTTCGAATGTTTCAGCCTCTATATAAAGGTCAGCTGCAGAAGCTTCTGTTGAATTTATGTGCTCATGTTGAAAGCAGAAATTCTGTTGTGAGAATTCTGATGGGCATACTAATGCTTGATACAAGAAAGCCTGGGAATCACTCAACTGATATCGAAACATCGTATCGGCTTTATGGTTGCCAGGGCAATGTGATGTATTCACGCGCTTCAGGAGTTCCACCATTGTTATCTCGCCGCATTCTGGAAACTCTGACATATTTGGCTCGGCATCATCCTAACGTGGCAAAGATTTTGCTTCATTTAAGGTTGCCTCATTCTGCTCTTCAAGAAAGAGAGAATAGTGATAGGGCTCGTGGAAAAGCTGTGATGGTTGTGGATGAGAATGGTCAAAATAATCAGGAAGGATATCTGTCCATAGCCTTGCTTTTGAGCCTCTTGAATCAACCCCTTTATTTGACGAGAAGTATAGCTCATCTTGAACAGCTACTTAACTTATTGGATGTCATCATTGATAATGCTGAAACCAAGTTACCGGAAAAATCTGGGGTTTCTATTACTGAACAACCCTCGGCTCCTCAAGCTTCTGATGCTGAGATGAATACAGAGTCTGGTGGCATGTCCGTTGATGTTGGAACGCAAAGTAAGGTTGTTGATTCCTCCAAACCCTCCACTTCTGGTGCAGATGACGAATGCCATACTGAAAGTGTTCTGCTGAACCTGCCACAAGCAGAACTTCGCCTTCTATGTTCATTGCTTGCACGAGAAGGGCTTTCAGATAATGCTTATACTCTTGTGGCTGAGGTAATGAAGAAGTTGGTGGCAATTGTTCCTACCCATTCCAATCTGTTTATTACCGAGCTAGCAGATGCTGTTAGAAATTTGACTAGATCTGCCATGGATGAGTTGTGCAAGTTTGGTGAAGCAGTGAAAGCGCTCCTAAGTACCAAGTCGTCTGATGGAGCTGCTATTTTAAGAGTTCTGCAGGCATTAAGCTCCCTTGTTGCCTCACTGATTGAGAAAGAGAAGGATCCACAGACTCTTGCAGATAAGGAGCACACTACTCTTTCTCAGGTTTGGGATATCAATGCAGCTTTGGAGCCTTTGTGGCTTGAGCTAAGCAGTTGCATAAGTAAGATAGAAAGCTATTCAGAAACCACCCCTGATTTGTTGACTTCATATAGAGCTTCCACATCTAAACCATCTGGTGTAATTCCTCCCCTGCCTGCTGGGACTCAAAATATTTTGCCATACATAGAATCTTTCTTCGTGGTTTGTGAGAAATTGCATCCTGGGCAGCCAGGCCCTGGTAACGACTTCAGCGTTGCTGCAGTTTCTGATGTTGATGATGCCAGTACATCTGCTAGCCTGCAGAAAACCTCGGGTCCCACTGTGAAAGTGGATGAGAAACATGTTGCTTTTATGAAGTTCTCAGAGAAACATAGGAAGTTGCTAAATGCTTTCATCCGTCAAAATCCTGGTTTGCTAGAAAAGTCTTTCTCGCTGATGCTGAAGGTTCCTCGCTTTATTGATTTTGACAACAAACGTGCTCACTTCAGGTCAAAGATTAAGCATCAACATGATCATCATCACAATCCTCTAAGAATTTCTGTAAGAAGAGCATACATTCTTGAAGATTCATATAACCAGCTTCGCATGCGGTCAGCTCTAGATTTGAAGGGGAGATTGACTGTTCACTTTCAAGGAGAGGAAGGAATTGATGCTGGTGGACTCACGAGGGAATGGTATCAGTTGCTGTCCAGGGTTATCTTTGACAAGGGAGCACTACTATTTACAACAGTGGGCAATGAATCAACTTTCCAACCCAACCCTAACTCTGTTTACCAGACAGAACATCTTTCATATTTCAAGTTTGTTGGGCGAGTGGTTGGGAAAGCACTTTTCGATGGTCAATTATTGGATGTCCATTTTACTCGATCCTTCTACAAGCACATTTTGGGGGCTAAGGTGACTTATCATGATATTGAGGCCATTGATCCTGATTACTTTAAAAACCTCAAGTGGATGCTCGAGAATGATATTAGTGATGTTCTAGACCTTACTTTCAGTATTGATGCAGATGAGGAGAAACTAATATTATATGAAAGAACAGAAGTAACTGACTATGAACTGATTCCTGGAGGGCAAAACATTAAAGTTACAGAAGAAAATAAGCACCAATATGTTGACTTAGTTGCGGAGCATCGATTAACAACTGCTATTCGTCCCCAGATAAATGCGTTTTTGGATGGATTCTCTGAATTAATTCCTAGGGAACTAATATCCATTTTCAATGACAAGGAACTGGAACTATTGATCAGTGGGCTTCCAGATATTGACTTGGATGACATGAGGGCAAATACCGAATATTCTGGATACAGCCCTGGATCTCCTGTGATACAGTGGTTTTGGGAGGTTGTCCAAGCTCTTAGTAAGGAGGATAAAGCTCGACTATTGCAGTTTGTGACTGGCACCTCGAAGGTACCTTTAGAAGGTTTTAGTGCACTTCAGGGGATTTCAGGCTCACAGAAGTTCCAGATACACAAAGCATACGGAAGCCCTGATCACTTGCCATCTGCACACACTTGTTTCAATCAGTTGGATTTACCAGAGTATCCTTCTAAGCAACATCTTGAAGAGAGATTGCTTCTTGCGATTCACGAAGCCAACGAGGGATTTGGTTTTGGTTAA

Protein Analysis

3648

Amino Acids

401.49

Weight (kDa)

5.07

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF908 PF06012 86 - 389 4.6e-31 Domain of Unknown Function (DUF908)
DUF913 PF06025 452 - 782 1.7e-59 Domain of Unknown Function (DUF913)
UBA PF00627 1277 - 1314 3.1e-09 UBA/TS-N domain
UBA_7 PF22562 1278 - 1324 3.9e-14 UBA-like domain
UBM PF14377 2567 - 2590 3.3e-07 Ubiquitin binding region
UBM PF14377 2601 - 2629 3e-11 Ubiquitin binding region
UBM PF14377 2638 - 2669 1e-06 Ubiquitin binding region
HECT PF00632 3337 - 3647 3.2e-99 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 719, 8073
AarI CACCTGC 1 cut(s) 4459
AasI GACNNNNNNGTC 1 cut(s) 190
AatII GACGTC 1 cut(s) 6760
Acc36I ACCTGC 4 cut(s) 858, 4164, 4459, 8985
Acc65I GGTACC 2 cut(s) 793, 10738
AccB1I GGYRCC 5 cut(s) 793, 5435, 6969, 10727, 10738
AccB7I CCANNNNNTGG 5 cut(s) 2248, 3667, 5719, 6148, 9563
AccBSI CCGCTC 2 cut(s) 1084, 4280
AccI GTMKAC 5 cut(s) 3130, 3307, 4100, 5291, 6367
AccII CGCG 6 cut(s) 2919, 3633, 4227, 5647, 8052, 8463
AclI AACGTT 1 cut(s) 1677
AcyI GRCGYC 3 cut(s) 6757, 6970, 8120
AdeI CACNNNGTG 1 cut(s) 7517
AfeI AGCGCT 1 cut(s) 9192
AflIII ACRYGT 4 cut(s) 6046, 7308, 8043, 9667
AhlI ACTAGT 1 cut(s) 2924
AjuI GAANNNNNNNTTGG 4 cut(s) 1741, 1773, 1892, 1924
AleI CACNNNNGTG 1 cut(s) 1840
Alw44I GTGCAC 3 cut(s) 775, 3987, 10758
Ama87I CYCGRG 4 cut(s) 6333, 7533, 9637, 10286
Aor51HI AGCGCT 1 cut(s) 9192
ApaLI GTGCAC 3 cut(s) 775, 3987, 10758
ArsI GACNNNNNNTTYG 6 cut(s) 4171, 4203, 6033, 6065, 6554, 6586
AseI ATTAAT 2 cut(s) 6663, 10520
Asp718I GGTACC 2 cut(s) 793, 10738
AspA2I CCTAGG 2 cut(s) 6869, 10526
AsuC2I CCSGG 1 cut(s) 7634
AsuII TTCGAA 1 cut(s) 8263
AsuNHI GCTAGC 3 cut(s) 2104, 9118, 9620
AvaI CYCGRG 4 cut(s) 6333, 7533, 9637, 10286
AvrII CCTAGG 2 cut(s) 6869, 10526
AxyI CCTNAGG 2 cut(s) 2459, 7728
BaeGI GKGCMC 7 cut(s) 779, 1090, 3991, 4425, 5440, 7230, 10762
BaeI ACNNNNGTAYC 8 cut(s) 7230, 7263, 7880, 7913, 10646, 10679, 10853, 10886
BamHI GGATCC 7 cut(s) 3908, 4846, 4978, 6137, 7493, 8138, 9286
BanI GGYRCC 5 cut(s) 793, 5435, 6969, 10727, 10738
BanII GRGCYC 5 cut(s) 1054, 3032, 3433, 8218, 8611
BauI CACGAG 6 cut(s) 840, 3984, 6888, 8610, 9018, 9991
BbsI GAAGAC 5 cut(s) 1539, 1772, 2163, 3492, 3975
BbvCI CCTCAGC 1 cut(s) 9057
BceAI ACGGC 1 cut(s) 6364
BcgI CGANNNNNNTGC 4 cut(s) 3962, 3996, 8042, 8076
BciVI GTATCC 4 cut(s) 6322, 8106, 10625, 10881
BclI TGATCA 8 cut(s) 2215, 6015, 6103, 6538, 6547, 9838, 10572, 10819
BcnI CCSGG 1 cut(s) 7634
BcuI ACTAGT 1 cut(s) 2924
BfoI RGCGCY 2 cut(s) 6973, 9194
BfuAI ACCTGC 4 cut(s) 858, 4164, 4459, 8985
BfuI GTATCC 4 cut(s) 6322, 8106, 10625, 10881
BglI GCCNNNNNGGC 2 cut(s) 1049, 9364
BglII AGATCT 5 cut(s) 730, 1619, 4369, 6268, 9146
BlnI CCTAGG 2 cut(s) 6869, 10526
BlpI GCTNAGC 3 cut(s) 4500, 6189, 9374
BmcAI AGTACT 3 cut(s) 264, 700, 2134
BmeT110I CYCGRG 4 cut(s) 6333, 7533, 9637, 10286
BmrI ACTGGG 1 cut(s) 6136
BmtI GCTAGC 3 cut(s) 2108, 9122, 9624
BmuI ACTGGG 1 cut(s) 6136
BoxI GACNNNNGTC 2 cut(s) 3081, 6847
BpiI GAAGAC 5 cut(s) 1539, 1772, 2163, 3492, 3975
BplI GAGNNNNNCTC 2 cut(s) 6911, 6943
BpmI CTGGAG 7 cut(s) 1139, 1504, 3332, 3856, 6168, 6662, 10416
Bpu10I CCTNAGC 3 cut(s) 8193, 9057, 10221
Bpu1102I GCTNAGC 3 cut(s) 4500, 6189, 9374
Bpu14I TTCGAA 1 cut(s) 8263
BpuEI CTTGAG 6 cut(s) 4862, 6425, 7073, 8820, 9389, 10259
BpuMI CCSGG 1 cut(s) 7634
Bsa29I ATCGAT 1 cut(s) 10462
BsaAI YACGTR 1 cut(s) 8177
BsaBI GATNNNNATC 3 cut(s) 1323, 7815, 9843
BsaHI GRCGYC 3 cut(s) 6757, 6970, 8120
BsaI GGTCTC 4 cut(s) 1862, 3310, 3635, 4146
BsaWI WCCGGW 3 cut(s) 104, 7162, 8791
Bse118I RCCGGY 2 cut(s) 7031, 8020
Bse21I CCTNAGG 2 cut(s) 2459, 7728
Bse8I GATNNNNATC 3 cut(s) 1323, 7815, 9843
BseCI ATCGAT 1 cut(s) 10462
BseJI GATNNNNATC 3 cut(s) 1323, 7815, 9843
BseSI GKGCMC 7 cut(s) 779, 1090, 3991, 4425, 5440, 7230, 10762
BseYI CCCAGC 7 cut(s) 114, 498, 1811, 2610, 3100, 4751, 9485
BsgI GTGCAG 5 cut(s) 2415, 7500, 7740, 8958, 10818
Bsh1236I CGCG 6 cut(s) 2919, 3633, 4227, 5647, 8052, 8463
Bsh1285I CGRYCG 2 cut(s) 998, 2917
BshNI GGYRCC 5 cut(s) 793, 5435, 6969, 10727, 10738
BshVI ATCGAT 1 cut(s) 10462
BsiEI CGRYCG 2 cut(s) 998, 2917
BsiHKCI CYCGRG 4 cut(s) 6333, 7533, 9637, 10286
BsiSI CCGG 7 cut(s) 105, 4055, 7032, 7163, 7633, 8021, 8792
BslFI GGGAC 5 cut(s) 3807, 4400, 9502, 9627, 10467
BsmFI GGGAC 5 cut(s) 3807, 4400, 9502, 9627, 10467
BsmI GAATGC 8 cut(s) 664, 2281, 2788, 6814, 6856, 7512, 8496, 8954
Bso31I GGTCTC 4 cut(s) 1862, 3310, 3635, 4146
BsoBI CYCGRG 4 cut(s) 6333, 7533, 9637, 10286
Bsp119I TTCGAA 1 cut(s) 8263
Bsp1407I TGTACA 2 cut(s) 873, 2353
Bsp1720I GCTNAGC 3 cut(s) 4500, 6189, 9374
Bsp19I CCATGG 6 cut(s) 2394, 3444, 3666, 6147, 6973, 9153
BspDI ATCGAT 1 cut(s) 10462
BspFNI CGCG 6 cut(s) 2919, 3633, 4227, 5647, 8052, 8463
BspHI TCATGA 8 cut(s) 1078, 1633, 4309, 5203, 6388, 6550, 7468, 10234
BspMAI CTGCAG 8 cut(s) 869, 2200, 4122, 4698, 8298, 9243, 9589, 9630
BspMI ACCTGC 4 cut(s) 858, 4164, 4459, 8985
BspOI GCTAGC 3 cut(s) 2108, 9122, 9624
BspQI GCTCTTC 8 cut(s) 1995, 2458, 2712, 2793, 3419, 7728, 8586, 9868
BspT104I TTCGAA 1 cut(s) 8263
BspT107I GGYRCC 5 cut(s) 793, 5435, 6969, 10727, 10738
BspTNI GGTCTC 4 cut(s) 1862, 3310, 3635, 4146
BsrBI CCGCTC 2 cut(s) 1084, 4280
BsrFI RCCGGY 2 cut(s) 7031, 8020
BsrGI TGTACA 2 cut(s) 873, 2353
BssAI RCCGGY 2 cut(s) 7031, 8020
BssNAI GTATAC 2 cut(s) 5292, 6368
BssNI GRCGYC 3 cut(s) 6757, 6970, 8120
BssSI CACGAG 6 cut(s) 840, 3984, 6888, 8610, 9018, 9991
Bst1107I GTATAC 2 cut(s) 5292, 6368
Bst2BI CACGAG 6 cut(s) 840, 3984, 6888, 8610, 9018, 9991
BstACI GRCGYC 3 cut(s) 6757, 6970, 8120
BstAPI GCANNNNNTGC 5 cut(s) 885, 1040, 3194, 5459, 5510
BstAUI TGTACA 2 cut(s) 873, 2353
BstBAI YACGTR 1 cut(s) 8177
BstBI TTCGAA 1 cut(s) 8263
BstDSI CCRYGG 7 cut(s) 2394, 3171, 3444, 3666, 6147, 6973, 9153
BstEII GGTNACC 1 cut(s) 6034
BstENI CCTNNNNNAGG 4 cut(s) 2175, 4862, 8176, 10746
BstFNI CGCG 6 cut(s) 2919, 3633, 4227, 5647, 8052, 8463
BstH2I RGCGCY 2 cut(s) 6973, 9194
BstMCI CGRYCG 2 cut(s) 998, 2917
BstPAI GACNNNNGTC 2 cut(s) 3081, 6847
BstPI GGTNACC 1 cut(s) 6034
BstSLI GKGCMC 7 cut(s) 779, 1090, 3991, 4425, 5440, 7230, 10762
BstUI CGCG 6 cut(s) 2919, 3633, 4227, 5647, 8052, 8463
BstV2I GAAGAC 5 cut(s) 1539, 1772, 2163, 3492, 3975
BstXI CCANNNNNNTGG 7 cut(s) 566, 1888, 3919, 4003, 6224, 7016, 7397
BstZ17I GTATAC 2 cut(s) 5292, 6368
Bsu15I ATCGAT 1 cut(s) 10462
Bsu36I CCTNAGG 2 cut(s) 2459, 7728
BsuI GTATCC 4 cut(s) 6322, 8106, 10625, 10881
BsuTUI ATCGAT 1 cut(s) 10462
BtgI CCRYGG 7 cut(s) 2394, 3171, 3444, 3666, 6147, 6973, 9153
BtgZI GCGATG 2 cut(s) 3648, 5219
BtsI GCAGTG 2 cut(s) 3687, 9189
BveI ACCTGC 4 cut(s) 858, 4164, 4459, 8985
CciI TCATGA 8 cut(s) 1078, 1633, 4309, 5203, 6388, 6550, 7468, 10234
Cfr10I RCCGGY 2 cut(s) 7031, 8020
ClaI ATCGAT 1 cut(s) 10462
CseI GACGC 4 cut(s) 4216, 5552, 5901, 8109
CsiI ACCWGGT 1 cut(s) 3546
CspCI CAANNNNNGTGG 4 cut(s) 1977, 2012, 3153, 3188
DinI GGCGCC 1 cut(s) 6971
DraI TTTAAA 3 cut(s) 759, 1411, 10267
DraIII CACNNNGTG 1 cut(s) 7517
DrdI GACNNNNNNGTC 1 cut(s) 190
DseDI GACNNNNNNGTC 1 cut(s) 190
Ecl136II GAGCTC 2 cut(s) 3030, 8216
Eco147I AGGCCT 5 cut(s) 4198, 5041, 7180, 8166, 8182
Eco24I GRGCYC 5 cut(s) 1054, 3032, 3433, 8218, 8611
Eco31I GGTCTC 4 cut(s) 1862, 3310, 3635, 4146
Eco32I GATATC 4 cut(s) 7849, 8410, 8666, 9340
Eco47III AGCGCT 1 cut(s) 9192
Eco53kI GAGCTC 2 cut(s) 3030, 8216
Eco81I CCTNAGG 2 cut(s) 2459, 7728
Eco88I CYCGRG 4 cut(s) 6333, 7533, 9637, 10286
Eco91I GGTNACC 1 cut(s) 6034
EcoICRI GAGCTC 2 cut(s) 3030, 8216
EcoNI CCTNNNNNAGG 4 cut(s) 2175, 4862, 8176, 10746
EcoO109I RGGNCCY 3 cut(s) 3655, 9560, 9641
EcoO65I GGTNACC 1 cut(s) 6034
EcoRI GAATTC 5 cut(s) 4246, 4486, 7564, 7823, 8352
EcoRV GATATC 4 cut(s) 7849, 8410, 8666, 9340
EcoT22I ATGCAT 3 cut(s) 435, 4686, 6315
EcoT38I GRGCYC 5 cut(s) 1054, 3032, 3433, 8218, 8611
EgeI GGCGCC 1 cut(s) 6971
EheI GGCGCC 1 cut(s) 6971
FaqI GGGAC 5 cut(s) 3807, 4400, 9502, 9627, 10467
FauI CCCGC 3 cut(s) 1077, 4946, 7362
FauNDI CATATG 1 cut(s) 1597
FbaI TGATCA 8 cut(s) 2215, 6015, 6103, 6538, 6547, 9838, 10572, 10819
FblI GTMKAC 5 cut(s) 3130, 3307, 4100, 5291, 6367
FriOI GRGCYC 5 cut(s) 1054, 3032, 3433, 8218, 8611
GsaI CCCAGC 7 cut(s) 118, 502, 1815, 2614, 3104, 4755, 9489
GsuI CTGGAG 7 cut(s) 1139, 1504, 3332, 3856, 6168, 6662, 10416
HaeII RGCGCY 2 cut(s) 6973, 9194
HapII CCGG 7 cut(s) 105, 4055, 7032, 7163, 7633, 8021, 8792
HgaI GACGC 4 cut(s) 4216, 5552, 5901, 8109
Hin1I GRCGYC 3 cut(s) 6757, 6970, 8120
HincII GTYRAC 8 cut(s) 1930, 3131, 6130, 7249, 7916, 7986, 9429, 10444
HindII GTYRAC 8 cut(s) 1930, 3131, 6130, 7249, 7916, 7986, 9429, 10444
HpaI GTTAAC 1 cut(s) 7986
HpaII CCGG 7 cut(s) 105, 4055, 7032, 7163, 7633, 8021, 8792
Hpy99I CGWCG 2 cut(s) 3132, 3135
HpyCH4IV ACGT 6 cut(s) 1677, 6280, 6757, 8176, 8538, 9802
HpySE526I ACGT 6 cut(s) 1677, 6280, 6757, 8176, 8538, 9802
Hsp92I GRCGYC 3 cut(s) 6757, 6970, 8120
KasI GGCGCC 1 cut(s) 6969
KflI GGGWCCC 1 cut(s) 9641
KpnI GGTACC 2 cut(s) 797, 10742
Ksp22I TGATCA 8 cut(s) 2215, 6015, 6103, 6538, 6547, 9838, 10572, 10819
KspAI GTTAAC 1 cut(s) 7986
LguI GCTCTTC 8 cut(s) 1995, 2458, 2712, 2793, 3419, 7728, 8586, 9868
MabI ACCWGGT 1 cut(s) 3546
MaeII ACGT 6 cut(s) 1677, 6280, 6757, 8176, 8538, 9802
MbiI CCGCTC 2 cut(s) 1084, 4280
MfeI CAATTG 5 cut(s) 3346, 3407, 7073, 7698, 9081
Mly113I GGCGCC 1 cut(s) 6970
Mph1103I ATGCAT 3 cut(s) 435, 4686, 6315
MspI CCGG 7 cut(s) 105, 4055, 7032, 7163, 7633, 8021, 8792
MunI CAATTG 5 cut(s) 3346, 3407, 7073, 7698, 9081
Mva1269I GAATGC 8 cut(s) 664, 2281, 2788, 6814, 6856, 7512, 8496, 8954
MvnI CGCG 6 cut(s) 2919, 3633, 4227, 5647, 8052, 8463
NarI GGCGCC 1 cut(s) 6970
NciI CCSGG 1 cut(s) 7634
NcoI CCATGG 6 cut(s) 2394, 3444, 3666, 6147, 6973, 9153
NdeI CATATG 1 cut(s) 1597
NheI GCTAGC 3 cut(s) 2104, 9118, 9620
NmeAIII GCCGAG 2 cut(s) 8503, 8807
NmuCI GTSAC 7 cut(s) 1694, 1714, 3050, 5066, 6241, 10225, 10720
NsiI ATGCAT 3 cut(s) 435, 4686, 6315
NspV TTCGAA 1 cut(s) 8263
OliI CACNNNNGTG 1 cut(s) 1840
PaeI GCATGC 4 cut(s) 3227, 4688, 8246, 9916
PaeR7I CTCGAG 2 cut(s) 7533, 10286
PagI TCATGA 8 cut(s) 1078, 1633, 4309, 5203, 6388, 6550, 7468, 10234
PaqCI CACCTGC 1 cut(s) 4459
PceI AGGCCT 5 cut(s) 4198, 5041, 7180, 8166, 8182
PciI ACATGT 4 cut(s) 6046, 7308, 8043, 9667
PciSI GCTCTTC 8 cut(s) 1995, 2458, 2712, 2793, 3419, 7728, 8586, 9868
PcsI WCGNNNNNNNCGW 4 cut(s) 847, 8260, 9576, 10923
PctI GAATGC 8 cut(s) 664, 2281, 2788, 6814, 6856, 7512, 8496, 8954
PflFI GACNNNGTC 1 cut(s) 6981
PflMI CCANNNNNTGG 5 cut(s) 2248, 3667, 5719, 6148, 9563
PfoI TCCNGGA 1 cut(s) 10393
PluTI GGCGCC 1 cut(s) 6973
Ppu21I YACGTR 1 cut(s) 8177
PpuMI RGGWCCY 2 cut(s) 3655, 9641
PscI ACATGT 4 cut(s) 6046, 7308, 8043, 9667
PshAI GACNNNNGTC 2 cut(s) 3081, 6847
PshBI ATTAAT 2 cut(s) 6663, 10520
PsiI TTATAA 2 cut(s) 719, 8073
Psp124BI GAGCTC 2 cut(s) 3032, 8218
Psp1406I AACGTT 1 cut(s) 1677
Psp5II RGGWCCY 2 cut(s) 3655, 9641
PspEI GGTNACC 1 cut(s) 6034
PspFI CCCAGC 7 cut(s) 114, 498, 1811, 2610, 3100, 4751, 9485
PspPPI RGGWCCY 2 cut(s) 3655, 9641
PspXI VCTCGAGB 1 cut(s) 7533
PsrI GAACNNNNNNTAC 2 cut(s) 1800, 1832
PstI CTGCAG 8 cut(s) 869, 2200, 4122, 4698, 8298, 9243, 9589, 9630
PsyI GACNNNGTC 1 cut(s) 6981
PvuII CAGCTG 7 cut(s) 1397, 2348, 4699, 6188, 7172, 7364, 8293
SacI GAGCTC 2 cut(s) 3032, 8218
SalI GTCGAC 1 cut(s) 3129
SapI GCTCTTC 8 cut(s) 1995, 2458, 2712, 2793, 3419, 7728, 8586, 9868
ScaI AGTACT 3 cut(s) 264, 700, 2134
SexAI ACCWGGT 1 cut(s) 3546
SfoI GGCGCC 1 cut(s) 6971
Sfr274I CTCGAG 2 cut(s) 7533, 10286
SfuI TTCGAA 1 cut(s) 8263
SgrDI CGTCGACG 1 cut(s) 3129
SlaI CTCGAG 2 cut(s) 7533, 10286
SmlI CTYRAG 8 cut(s) 4841, 6404, 7052, 7533, 8835, 9368, 10274, 10286
SmoI CTYRAG 8 cut(s) 4841, 6404, 7052, 7533, 8835, 9368, 10274, 10286
SpeI ACTAGT 1 cut(s) 2924
SphI GCATGC 4 cut(s) 3227, 4688, 8246, 9916
SseBI AGGCCT 5 cut(s) 4198, 5041, 7180, 8166, 8182
SspDI GGCGCC 1 cut(s) 6969
SspI AATATT 6 cut(s) 1273, 4813, 5610, 9499, 10353, 10625
SstI GAGCTC 2 cut(s) 3032, 8218
StuI AGGCCT 5 cut(s) 4198, 5041, 7180, 8166, 8182
TaiI ACGT 6 cut(s) 1680, 6283, 6760, 8179, 8541, 9805
TaqII GACCGA 1 cut(s) 2903
TauI GCSGC 4 cut(s) 154, 2501, 6815, 8496
TseFI GTSAC 7 cut(s) 1694, 1714, 3050, 5066, 6241, 10225, 10720
Tsp45I GTSAC 7 cut(s) 1694, 1714, 3050, 5066, 6241, 10225, 10720
Tth111I GACNNNGTC 1 cut(s) 6981
Van91I CCANNNNNTGG 5 cut(s) 2248, 3667, 5719, 6148, 9563
VneI GTGCAC 3 cut(s) 775, 3987, 10758
VspI ATTAAT 2 cut(s) 6663, 10520
XagI CCTNNNNNAGG 4 cut(s) 2175, 4862, 8176, 10746
XbaI TCTAGA 5 cut(s) 2710, 5278, 6025, 9925, 10309
XcmI CCANNNNNNNNNTGG 5 cut(s) 2728, 6224, 7016, 7397, 9652
XhoI CTCGAG 2 cut(s) 7533, 10286
XmaJI CCTAGG 2 cut(s) 6869, 10526
XmiI GTMKAC 5 cut(s) 3130, 3307, 4100, 5291, 6367
ZraI GACGTC 1 cut(s) 6758
ZrmI AGTACT 3 cut(s) 264, 700, 2134
Zsp2I ATGCAT 3 cut(s) 435, 4686, 6315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.