Rh7BG413200

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0012629
Physical Location & Seq
Forward (+)
46582282 .. 46597968
15687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG413200.1

Sequence Viewer

Length: 10509 bp
ATGACTACTGTAAGATCAAGCTTGCCGTCCAGGATTCGGCAGCTTCTGTCCGCCGACGGTGCTCTCGGGCCGTCTATCAAACTCGACTCCGAGCCGTCTCCTAAGATCAAAGCCTTTATCAATAAGGTGATACAGTGTCCATTACAAGATATAGCTATTCCTCTTTCCGGTTTCCGCTGGGAGTACAGTAAGGGTAATTTCAACCATTGGAGGCCGCTTTTTCTGCATTTCGATACATATTTCAAGACATACTTGTCTGGTAGAAATGACCTACTCTTGTCCGATAAAATCTTAGAAGATGATACTCCATTCCCAAAACATGCAGTACTACAAATTTTGAGAGTGATGCAAACAATTTTAGAGAATTGCCATAACAAGAGTTCTTTTGATGGCTTAGAGCATTTCAAGCTGCTACTTGCATCAACAGATCCAGAAGTTCTTATAGCAACACTCGAAACACTTTCTGCGCTTGTGAAAATATATCCCTCTAAGATGCATGTCAGTGGAAAGATGATCGGCTGTGGTTCTGTAAACAGCTATCTCCTGTCGCTTGCACAGGGCTGGGGAAGCAAGGAAGAAGGGTTGGGTCTATTTTCATGTGTCATGGCAAACGAGACTGCCCAAGATGACGGGCTGAATTTGTTCCCATCTGATGTAGAAAATGATTCTGACAAATCTCAGCACCGAATAGGTTCTACCCTTTATTTTGAATTGCATGGGAATGCCCAAAGTACAGAGGAGAGCAGTAGCAATGTAAATAGTACTTCCAGTTTGGGGGTTATAAACATGCCAGATTTGCATTTGCAGAAGGAGGATGATTTAAAGCTGATGAAACAGTGCATAGAGGACTACAGGGTACCTCCTGAGATTAGGTTCTCACTCCTGACAAGAATCAGATATGCTCGTGCCTTCCGTTCACCAAGAATCTGCAGGTTGTACAGCAGGATTTGCCTTCTTGCATTTATTGTGCTTGTTCAATCTAGTGATGCACATGAAGAACTTGTATCATTCTTTGCTAATGAGCCAGAGTATACTAATGAACTGATTAGAATTGTGCGGTCGGAAGAATCAGTTTCTGGAACCATCAGAACACATGCAATGCTTGCCTTGGGAGCTCAATTAGCTGCTTATTCTGCATCTCATGAGCGGGCACGAATTTTGAGTGGTTCTAGTATCAGTTTTGCAGGAGGGAATCGTATGATACTTCTGAATGTACTCCAGAGAGCAGTTTTATCACTTAAAACCTCCAATGATCCAACTTCTCTTGCTTTTGTTGAAGCTCTGCTTCAGTTTTATTTGCTCCATGTGGTTTCATCGTCCACTACAGGGAGTAATATTAGAGGGTCAGGCATGGTTCCAACATTCTTGCCTCTTTTGGAGGATTCTGATCCCTTGCACTTGCATCTAGTCTGTTTCGCTGTGAAAACTCTGCAAAAGCTCATGGATTACAGTAGTTCAGCTGTGTCTCTCTTTAAAGAGTTAGGGGGAGTTGAACTGTTGGCTCAGAGACTACAGATAGAGGTACATAGGGTGATAGGCTTGGTCGGCGATAATGATAATTCAATGGTCATTGGTGAAAGCTCCAGATATAATGAAGACCAGTTGTACTCCCAGAAGAGGCTCATTAAAGCTTCGTTGAAGGCACTTGGGTCTGCTTCATATGCTGCTGGCAATTCTACCAGATCTCAGCATCCTCATGACAGTTCTTTACCTGAAACTCTTTCTCTGATCTTTGGGAACGTTGATAAGTTTGGAGGTGACATTTATCACTCTGCTGTGACAGTTCTGAGTGAAACGATACACAAAGACCCAACTTGTTATTCTGCTTTGCATGATATGGGTCTTCCAGATGCTTTCATATCTTCAGTTGTAGCTGGGGTTCTTCCATCTGCAAAGGCACTTCAGTGTGTGCCTAATGGTCTCGGTGCTATTTGTCTTAACGCCAAAGGCTTGGAGGCTGTGAAGGAAAAGTCGGCCTTACGATTTCTTGTTGACATCTTCACCAGCAAGAAGTATGTAGTAGCAATGAATGGAGCTATTGTCCATTTGACAAATGCTGTGGAAGAGCTTTTGCGCCATGTATCTTCGCTAAGAAGTATTGGTGTTGATATTATGATTGAAATTGTTGAAAAAATTGCTTCCTTCACTGACAACAACAATGCAGGGCTAGCAGGAAAGGCTAGTGGGAGTGGGAGTACTGCTATGGAAATGGATTCTGAAGACAAGGAACAGCCTTTGGTAGGTGCTGTAGATTCGGCTGCAGATGGTATCAGTAATGATCAGTTCATTCAATTATCCATTTTCCATTTGATGGTACTGGTCCACAGAACAATGGAGAATGCTGAAATATGTCGGTTATTTGTTGAAAAGTCTGGAATTGATGCTTTACTGAAGCTTTTGTTACAGCCAACTGTTGTACAATCATCTGATGGAATGTCTATTGCTCTACATAGCACCATGGTTTTCAAAGATTTCACTCAAAATCACTCTGCTGCACTTGCCCGTGCATTTTGCTCTTCCCTTAGGGGCCACCTAAAGAAAGCTTTGTCGGAATTTGGTGCAGCTTCAGGGTCTTTCTTACTGGAACCTAAGATGACTTCAGATGGTGGGATCTTTCCTTCACTGTTTCTCGTTGAGTTCCTTTTGTTTATTGCTGCCTCAAAGGAAAACCGCTGGGTAACTGCATTGCTTACAGAACTTGGAAATGATAGCAAGGATGTTCTGGAAGATATTGGGCGTGTCCATCGGGAAGTTCTATGGCAGATTGCTCTTCTAGAAGATACCAAGTCTGAAATGGAGGATGAAAGTGCTGGTTCTACCACTGAGTCGCAACAGTCAGAAATGAATGCAAGTGACTCTGAAGAGCAAAGGTTCAACTCTTTTAGGCAGTTTCTTGATCCATTGATGAGAAGAAGGCAATCTGGATGGAGCATTGAATCGCAATTTCTTGATCTTATTAACCTGTATCGTGATCTCGGTCGCGCCACTAGTTCTCAAAGAACACATTCTGATGGTCCGTCAAATCTGCGGATTGGATCTAGTCATCATTCTGGTTCTTCAGATGCTGGTAGAAGGGAGTATGACCAGCAGAGCTCCTACTATACTTCTTGCTGTGACATGGTAAGATCACTTTCTTTTCACATAAGTCATTTGTTTCAAGAGCTGGGAAAGGTCATGTACCAACCTTCTCGTCGACGGGATGATATTGTGAATGTTTCTGCTGCTGCAAAATCCGTGGCTTCTACATTTGCATCTATTGCATTGGATCACATGAGTTTTGGGGGGCATGCAAGTTCTTCTGGATCTGAGGTGTCTATATCAGCAAAGTGTCGTTACTTTGGTAAAGTTATTGATTTCATTGATGTCAGTCTACTGGAGAGACCAGATTCATGTAACTCGGTTTTCCTCAATTGCTTGTATGGACATGGAGTTATCCAGTCAGTTTTAACGACATTTGAAGCAACCAGTCAATTGCTCTTCACAGTAAATAGGGCTCCTGCATCTCCCATGGAAACTGATGATGGGAACTCAAAGCAGGATGAAAGGGAAGATACTGACCATTCATGGATTTATGGTCCGTTAGCTAGTTATGGAAAACTTATGGACCACCTGGTAACATCGTCTTTCATATTATCTCCTTTTACAAAACAGTTGCTTGCACAGCCCCTTGCAAATGGAACAATTCCTTTTCCACGCGATGCTGAGACCTTTGTCAAGGTCCTCCAATCCTTGGTGCTGAAGGCAGTGCTTCCTGTCTGGACTCATCCCCAATTTGTCGACTGTAGTTATGATTTTATTACTACAGTTATTTCTATAATCAGGCACATATACTCTGGAGTTGAAGTAAAGAATGTCAGTAGCAGTTCCAGTGCCCGTATTGCTGGTCCCCCTCCTAATGAGACAACTATATCAACGATTGTAGAGATGGGCTTCTCCAGGTCTAGGGCAGAAGAAGCTTTGAGACAGGTTGGATCCAATAGTGTGGAGTTGGCTATGGAGTGGTTGTGCTCCCATCAAGAGGAAGTTCAAGAAGACGATGAACTTGCTCGTGCACTTGCCATGTCTTTGGGTAATTCAGAGTCTGACACTAAGGAAGCTGGTGCAATGGAAAGTGCGCCGGAAGAAGAAAAGGTTCAACTTCCTCCTGTTGAGGAGTTGTTGTCTACATGCACAAAGCTTCTGCAGATGAAGGAACCTCTAGCTTTTCCAGTGCGAGACCTGCTTGTGATGATATGCTCCCAAAATGACGGTCAATGTAGGCCTAGTATCATATCATTCATTGTTGATCGCGTCAAAGAATCTAGTTTGAATTCTGACAGTGGAAACTGTAACTTGCTATCCGCTCTTTTTCATGTTCTTGCTTTAATTCTTCACGAAGATGCAGTTGCAAGAGAAATAGCCTCGAAGAATGGATTTGTGAAAATAGCTTCAGATCTACTTTCGCAATGGGACTCTAGTTCAACTGGCATAGCAAAACGAGAAGTGCCCAAGTGGGTAACTACAGCTTTTCTTGCAATAGATCGGCTGTTGCAGGTGGATCAAAAATTGAATTCTGAAATTGCTGAACAGTTGAAGAGAGATGCTGTTAGTAGCCAGCAAACATCTATTAGCATTGATGAGGACAAGCAAAATAAGTTGCAGTCTGCATTGGGATTATCTTCGAAGCACATAGAAATTAAGGAGCAGAAGAGGCTTATTGAGATTGCTTGTTCATGTATTAGGAATCAGCTTCCTTCTGAAACAATGCATGCAGTTCTGCAGCTGTGCTCTACCCTCACCAAAACACATACAGTTGCTGTTAGTTTTCTTGATGCTGGGGGTTTAAGTTTGCTACTATCTTTGCCAACAAGTAGTCTATTTTCTGGTTTTGACAATATTGCTGCGACCATTATCCGTCATGTTCTTGAGGATCCTCAAACTCTTCAGCAGGCAATGGAATTTGAAATAAGGCACAATCTTGTGGCTGCTGCCAACAGACATTCAAATGGAAGGGTTTCTCCCCGCAATTTTCTAGCAAGTTTAAGTTCTGCCATTTCCAGGGATCCAGTGATATTCATGCGTGCTGCTCAGTCTATTTGTCAAGTGGAGATGGTTGGTGAGAGGCCTTGCATTGTTTTGTTGAAAGATCGTGACAAAGATAAAACCAAAGAGAAAGAAAAAGAGAAGGATAAATCTTTGGACAAGGAGAAAACACATATTTCGGATGGGAAAACTGCTCTGGGTAATACAAATCCAGTACCTTCTGGCACTGCACAAGGCAAGGCTCATGATTCAAACTCAAAGAGTGGTAAAGTTCATCGCAAATATCCCCAGAGTTTTGTGAGTGTGATTGAGCTTCTTCTAGATTCTGTGTATACTTATGTTCCTCCTTCAAAAGACAATCTTGTTGTTGATGTGCTCCATGATACCCCGTCATCGACTGACATGGACATTGATGTTGCTGCTGTCAAAGGAAAAGGAAAAGCTATTGCCTCATCTTCTGAAGATGGTGGAGCTGGTGCCCAAGAAGCTTCTGCATCACTTGCAAAGGTTGTTTTTATTTTGAAGCTTCTGACAGAGATTCTAGCCATGTATGCTTCATCTGCCCATGTTCTACTTCGGAAAGACGCTGAAATTAGTAGTTGCAGGACCCCTAATCCAAAGGGTTCTACTGCTGTATGCACTGGTGGAATATTTCACCATGTTCTTCACAAGTTTATTCCATATTCGCGGAGTGCCAAGAAGGAAAAGAAAACAGATGGTGATTGGAAGCACAAGTTAGCAAGCAGGGCGAGCCAGTTTTTGGTTGCATCATGTGTTCGTTCTTCCGAGGCGAGGAAAAGGATTTTTACAGAGATCAGTTATATTTTCAATGACTTTGTGGACTCATGTAATGGCTTTCGACCACCTGAAAATGACATACAAGCTTTTGCTGATCTGCTTAATGATGTTCTGGCTGCTCGGACTCCTACTGGTTCATACATCTCCGCAGAAGCATCTGCTACTTTTATAGATGTTGGTCTGGTTGGATCATTGACTCGAACCCTCCAAGTGCTGGACCTGGACCATGCTGACTCACCTAAAGTTGTTACAGGTCTGATCAAAGCTCTAGAACTGGTAACCAAAGAACATGTCCATTTGGCTGATTCAACTGCTGGTAAGGGCGACAGTTCTACAAAACCTCCTGATCAGTCTGGCAGGACAGATAATGTTGGCGGTGGATCCCAGTCCATGGAGACACCATCCCAATCCCAACACAATTCTGCTCCAGCTGAGCGCACTGAGTCTTTTAATGCTGTCCAATCTTATGGTGGTTCTGAGGCTGTCACAGATGATATGGAACATGACCAAGATCTTGAAGGACGTTTTGCTGCTGCTAATGAAGATGAGTATATGCATGAAATTTCAGAGGATACTCGGGGTCTGGAAAACGGCATTGATACAATGGGTATACGGTTTGAAATTCAGCCTCATGAGCAAGAAAATCTTGAGGATGATGATGAGGATGATGAAGATATGTCTGAGGATGATGGAGATGAAGTGGATGATGATGAAGATGAAGATGATGAGGAGCATAATGATCTGGAAGATGAAGTCCATCACTTGCCACATCCTGACACTGATCAAGATGATCATGAGATTGATGACGAAGAGTTTGATGAAGAAGTATTAGAAGAAGATGATGAGGATGAGGAGGATGAGGAGGATGGAGTTATACTGAGGCTGGAGGAAGGCATAAATGGGATTAATGTTTTTGACCATATTGAGGTTTTTGGAAGAGAGCATGGTTTCCCTAATGAAACACTTCATGTGATGCCAGTGGAAGTTTTTGGGTCTAGACGTCAAGGGCGCACTACTTCTATTTACAGTCTTTTGGGCAGAACAGGTGAGAATGCGGCTCCATCAAGGCATCCTCTTTTGGTTGGACCTTTGTCTCTGCATTCGGCCCCTCCTAGGCAACCAGAAAATTCTCGTGATGGCATCATACCAGATAGGAACTCTGAGATCACCTCATCAAGATTGGACAGTATTTTCCGATCATTGAGGAATGGGCGCCATGGACACCGTCTGAACTTGTGGATGGATGATAACCAGCAAGGTGGTGGATCAAATGCCGGTGTAGTACCCCAAGGACTTGAGGAGTTGCTTGTTTCCCAATTGAGGCGACCAACACCCGAAAAGACTTCTGAAGAGAATACAACACCAGTAGATTCTCAGAACAAAGAAGAAGTAGTTGAGTTGCAAGAACCGGATGCAGCTGTAAGGCCTGAAATGCCTGTTGAAAATGATATAAATAATGATAGTGCTAATGTGCCCCCTGCTGATACAATGGTCAACTCTGGCAATACTGATTTGGTAACACCAACAGCAAGTGAATCTTTACAAGCAATGGACATGTCTAGCACACATCCACAGTCTGTTGAGATGCAGTTTGAACATACTGATGCAGCTGTGCGGGATGTAGAAGCTGTGAGCCAAGAAAGTGGTGGAAGTGGAGCAACTTTAGGGGAGAGCCTTCGTAGCCTTGATGTTGAAATTGGGAGTGCTGATGGTCATGATGATGGTGCAGATAGGCAAGGATCCTCAGACAGAATGCCACTTGGTGATTCTCAGGCGACTCGAGCGAGGAGAACGAACATATCTTTTGGGAATTCTGCATCTGCAAATGCAAGAGATGTTTCACTTCATAGTGTAACTGAGGTTTCAGAAAATTCTAGCCGGGAAGCAGATCAGGATGGTCCAGCAGCAGAACAGCAACTTAATAGTGATGCTGGTTCTGGGGCAATTGATCCTGCTTTCTTGGATGCTCTTCCTGAGGAGTTGCGAGCTGAAGTCCTCTCTGCACAACAGGGTCAAGTAGCTCCACAGTCAGCCTCTGAGCCACAAAATGCTGGTGATATTGATCCAGAATTCCTTGCTGCCCTTCCCCCGGATATCAGGGCTGAAGTTTTAGCTCAACAGCAAGCCCAAAGGGTACATCAGTCTCAGGAACTGGAAGGTCAACCAGTTGAAATGGACACTGTTTCAATAATTGCAACCTTTCCTTCAGAATTGAGAGAAGAGGTTCTGTTAACTTCATCTGATGCTATACTTGCCAATCTTACACCGGCTCTAGTTGCGGAGGCAAACATGTTGCGCGAAAGATTTGCCAATCGTTATAATCGTACCCTATTTGGTATGTATCCTAGAAACCGTAGGGGTGAGGCGTCAAGACCTGGCATTGGATCCAGCCTGGACAGAATCGGTGGAGGCCTTGCCTCACGTAGGCCTATAGGTGCTAAGGTAGTTGAAGCTGAAGGAGCTCCTTTAGTCGAGGCGGAAGCTCTGCATGCAATGATTCGAGTGCTTCGAATGTTTCAGCCTCTATATAAAGGTCAGCTGCAGAAGCTTCTGTTGAATTTATGTGCTCATGTTGAAAGCAGAAATTCTGTTGTGAGAATTCTGATGGGCATACTAATGCTTGATACAAGAAAGCCTGGGAATCACTCAACTGATATCGAAACATCGTATCGGCTTTATGGTTGCCAGGGCAATGTGATGTATTCACGCGCCTCAGGTAAAGATGGAGTTCCACCATTGTTATCTCGCCGCATTCTGGAAACTCTGACATATTTGGCTCGGCATCATCCTAACGTGGCAAAGATTTTGCTTCATTTAAGGTTGCCTCATTCTGCTCTTCAAGAAAGAGAGAATAGTGATAGGGCTCGTGGAAAAGCTGTGATGGTTGTGGAGGAGAATGGTCAAAATAATCAGGAAGGATATCTGTCCATAGCCTTGCTTTTGAGCCTCTTGAATCAACCCCTTTATTTGACGAGAAGTATAGCTCATCTTGAACAGCTACTTAACTTATTGGATGTCATCATTGATAATGCTGAAACCAAGTTACCGGAAAAATCTGGGGTTTCTATTACTGAACAACCCTCGGCTCCTCAAGCTTCTGATGCTGAGATGAATACAGAGTCTGGTGGCACGTCTGTTGATGTTGGAACGCAAAGTAAGGTTGTTGATTCCTCCAAACCCTCCACTTCTGGTGCAGATGATGAATGCCATACTGAAAGTGTTCTGCTGAACCTGCCACAAGCAGAACTTCGCCTTCTATGTTCATTGCTTGCACGAGAAGGGCTTTCAGATAATGCTTATACTCTTGTGGCTGAGGTAATGAAGAAGTTGGTGGCAATTGTTCCTACCCATTCCAATCTGTTTATTACCGAGCTAGCAGATGCTGTTAGAAATTTGACTAGATCTGCCATGGATGAGTTGCGCAAGTTTGGTGAAGCAGTGAAAGCGCTCCTAAGTACCAAGTCGTCTGATGGAGCTGCTATTTTAAGAGTTCTGCAGGCATTAAGCTCCCTTGTTGCCTCACTGATTGAGAAAGAGAAGGATCCACAGATTCTTGCAGATAAGGAGCACACTACTCTTTCTCAGGTTTGGGATATCAATGCAGCTTTGGAGCCTTTGTGGCTTGAGCTAAGCAGTTGCATAAGTAAGATAGAAAGCTATTCAGAAACCACCCCTGATTTGTTGACTTCATATAGAGCTTCCACATCTAAACCATCTGGTGTAATTCCTCCCCTGCCTGCTGGGACTCAAAATATTTTGCCATACATAGAATCTTTCTTTGTGGTTTGTGAGAAATTGCATCCTGGGCAGCCAGGCCCTGGTAACGACTTCAGCGTTGCTGCAGTTTCTGAGGTTGATGATGCCAGTACATCTGCTAGCCTGCAGAAAACCTCGGGTCCCACTGTGAAAGTGGATGAGAAACATGTTGCTTTTATGAAGTTCTCAGAGAAACATAGGAAGTTGCTAAATGCTTTCATCCGTCAAAATCCTGGTTTGCTAGAAAAGTCTTTCTCGCTGATGCTGAAGGTTCCTCGCTTTATTGATTTTGACAACAAACGTGCTCACTTCAGGTCAAAGATTAAGCATCAACATGATCATCATCACAATCCTCTAAGAATTTCTGTAAGAAGAGCATACATTCTTGAAGATTCATATAACCAGCTTCGCATGCGGCCAACTCTAGATTTGAAGGGGAGATTGACTGTTCACTTTCAAGGAGAGGAAGGAATTGATGCTGGTGGACTCACGAGGGAATGGTATCAGTTGCTGTCCAGGGTCATCTTTGACAAGGGAGCACTACTATTTACAACAGTGGGCAATGAATCAACTTTTCAACCCAACCCTAACTCTGTTTACCAGACAGAACATCTTTCATATTTCAAGTTTGTTGGGCGAGTGGTTGGGAAAGCACTTTTCGATGGTCAATTATTGGATGTCCATTTTACTCGATCCTTCTACAAGCACATTTTGGGGGCTAAGGTGACTTATCATGATATTGAGGCCATTGATCCTGATTACTTTAAAAACCTCAAGTGGATGCTCGAGAATGATATAAGTGATGTTCTAGACCTTACTTTCAGTATTGATGCAGATGAGGAGAAACTAATATTATATGAAAGAACAGAAGTAATGCAATTTCTCTTCTCCTTAAACAGAATTTTTTGTCCCAATACGACTTCTGTGTATTAA

Protein Analysis

3502

Amino Acids

384.9

Weight (kDa)

5.13

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF908 PF06012 107 - 410 1.2e-31 Domain of Unknown Function (DUF908)
DUF913 PF06025 473 - 803 5.5e-60 Domain of Unknown Function (DUF913)
UBA PF00627 1298 - 1335 3e-09 UBA/TS-N domain
UBA_7 PF22562 1299 - 1345 3.8e-14 UBA-like domain
UBM PF14377 2589 - 2612 3.2e-07 Ubiquitin binding region
UBM PF14377 2623 - 2651 2.8e-11 Ubiquitin binding region
UBM PF14377 2660 - 2691 9.6e-07 Ubiquitin binding region
HECT PF00632 3362 - 3471 2.2e-23 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 782, 8139
AarI CACCTGC 1 cut(s) 4522
AasI GACNNNNNNGTC 1 cut(s) 253
AatII GACGTC 1 cut(s) 6823
Acc16I TGCGCA 1 cut(s) 9242
Acc36I ACCTGC 4 cut(s) 921, 4227, 4522, 9060
Acc65I GGTACC 1 cut(s) 856
AccB1I GGYRCC 3 cut(s) 856, 5498, 7032
AccB7I CCANNNNNTGG 6 cut(s) 2311, 3730, 5782, 6034, 6211, 9638
AccBSI CCGCTC 2 cut(s) 1147, 4343
AccI GTMKAC 7 cut(s) 1031, 3193, 3370, 3777, 4163, 5354, 6430
AccII CGCG 6 cut(s) 2982, 3696, 4290, 5710, 8118, 8529
AclI AACGTT 1 cut(s) 1740
AcoI YGGCCR 1 cut(s) 9992
AcyI GRCGYC 3 cut(s) 6820, 7033, 8186
AdeI CACNNNGTG 1 cut(s) 7583
AfeI AGCGCT 1 cut(s) 9267
AflIII ACRYGT 4 cut(s) 6109, 7374, 8109, 9742
AhlI ACTAGT 1 cut(s) 2987
AjiI CACGTC 1 cut(s) 8952
AjuI GAANNNNNNNTTGG 2 cut(s) 1804, 1836
AleI CACNNNNGTG 1 cut(s) 1903
Alw44I GTGCAC 1 cut(s) 4050
Ama87I CYCGRG 5 cut(s) 65, 6396, 7599, 9712, 10361
Aor51HI AGCGCT 1 cut(s) 9267
ApaLI GTGCAC 1 cut(s) 4050
ArsI GACNNNNNNTTYG 6 cut(s) 4234, 4266, 6096, 6128, 6617, 6649
AseI ATTAAT 1 cut(s) 6726
Asp700I GAANNNNTTC 8 cut(s) 641, 691, 3004, 4131, 4993, 6783, 8043, 9039
Asp718I GGTACC 1 cut(s) 856
AspA2I CCTAGG 1 cut(s) 6932
AsuC2I CCSGG 2 cut(s) 7700, 7910
AsuII TTCGAA 2 cut(s) 4661, 8329
AsuNHI GCTAGC 3 cut(s) 2167, 9193, 9695
AvaI CYCGRG 5 cut(s) 65, 6396, 7599, 9712, 10361
AvrII CCTAGG 1 cut(s) 6932
AxyI CCTNAGG 3 cut(s) 2522, 7794, 8533
BaeGI GKGCMC 6 cut(s) 1153, 3874, 4054, 4488, 5503, 7296
BaeI ACNNNNGTAYC 4 cut(s) 7296, 7329, 7946, 7979
BamHI GGATCC 7 cut(s) 3971, 4909, 5041, 6200, 7559, 8204, 9361
BanI GGYRCC 3 cut(s) 856, 5498, 7032
BanII GRGCYC 5 cut(s) 1117, 3095, 3496, 8284, 8686
BauI CACGAG 6 cut(s) 903, 4047, 6951, 8685, 9093, 10066
BbsI GAAGAC 4 cut(s) 1602, 1835, 2226, 4038
BbvCI CCTCAGC 1 cut(s) 9132
BceAI ACGGC 4 cut(s) 10, 55, 79, 6427
BcgI CGANNNNNNTGC 4 cut(s) 4025, 4059, 8108, 8142
BciVI GTATCC 2 cut(s) 6385, 8172
BclI TGATCA 6 cut(s) 2278, 6078, 6166, 6601, 6610, 9913
BcnI CCSGG 2 cut(s) 7700, 7910
BcuI ACTAGT 1 cut(s) 2987
BfoI RGCGCY 2 cut(s) 7036, 9269
BfuAI ACCTGC 4 cut(s) 921, 4227, 4522, 9060
BfuI GTATCC 2 cut(s) 6385, 8172
BglI GCCNNNNNGGC 1 cut(s) 9439
BglII AGATCT 4 cut(s) 1682, 4432, 6331, 9221
BlnI CCTAGG 1 cut(s) 6932
BlpI GCTNAGC 2 cut(s) 6252, 9449
BmcAI AGTACT 3 cut(s) 327, 763, 2197
BmeT110I CYCGRG 5 cut(s) 65, 6396, 7599, 9712, 10361
BmgBI CACGTC 1 cut(s) 8952
BmrI ACTGGG 1 cut(s) 6199
BmtI GCTAGC 3 cut(s) 2171, 9197, 9699
BmuI ACTGGG 1 cut(s) 6199
BoxI GACNNNNGTC 2 cut(s) 3710, 6910
BpiI GAAGAC 4 cut(s) 1602, 1835, 2226, 4038
BplI GAGNNNNNCTC 2 cut(s) 6974, 7006
BpmI CTGGAG 7 cut(s) 1202, 1567, 3395, 3855, 3919, 6231, 6725
Bpu10I CCTNAGC 3 cut(s) 8259, 9132, 10296
Bpu1102I GCTNAGC 2 cut(s) 6252, 9449
Bpu14I TTCGAA 2 cut(s) 4661, 8329
BpuEI CTTGAG 6 cut(s) 4925, 6488, 7136, 8895, 9464, 10334
BpuMI CCSGG 2 cut(s) 7700, 7910
BsaAI YACGTR 1 cut(s) 8243
BsaBI GATNNNNATC 3 cut(s) 1386, 7881, 9918
BsaHI GRCGYC 3 cut(s) 6820, 7033, 8186
BsaI GGTCTC 4 cut(s) 1925, 3373, 3698, 4209
BsaWI WCCGGW 3 cut(s) 167, 7228, 8866
Bse118I RCCGGY 2 cut(s) 7094, 8086
Bse21I CCTNAGG 3 cut(s) 2522, 7794, 8533
Bse8I GATNNNNATC 3 cut(s) 1386, 7881, 9918
BseJI GATNNNNATC 3 cut(s) 1386, 7881, 9918
BseSI GKGCMC 6 cut(s) 1153, 3874, 4054, 4488, 5503, 7296
BseYI CCCAGC 7 cut(s) 177, 561, 1874, 2673, 3163, 4814, 9560
BsgI GTGCAG 6 cut(s) 2478, 2580, 5235, 7566, 7806, 9033
Bsh1236I CGCG 6 cut(s) 2982, 3696, 4290, 5710, 8118, 8529
Bsh1285I CGRYCG 2 cut(s) 1061, 2980
BshNI GGYRCC 3 cut(s) 856, 5498, 7032
BsiEI CGRYCG 2 cut(s) 1061, 2980
BsiHKCI CYCGRG 5 cut(s) 65, 6396, 7599, 9712, 10361
BsiSI CCGG 8 cut(s) 168, 4118, 7095, 7229, 7699, 7910, 8087, 8867
BslFI GGGAC 5 cut(s) 3870, 4463, 9577, 9702, 10470
BsmBI CGTCTC 1 cut(s) 102
BsmFI GGGAC 5 cut(s) 3870, 4463, 9577, 9702, 10470
BsmI GAATGC 8 cut(s) 727, 2344, 2851, 6877, 6919, 7578, 8571, 9029
Bso31I GGTCTC 4 cut(s) 1925, 3373, 3698, 4209
BsoBI CYCGRG 5 cut(s) 65, 6396, 7599, 9712, 10361
Bsp119I TTCGAA 2 cut(s) 4661, 8329
Bsp1407I TGTACA 2 cut(s) 936, 2416
Bsp1720I GCTNAGC 2 cut(s) 6252, 9449
Bsp19I CCATGG 5 cut(s) 2457, 3507, 6210, 7036, 9228
BspFNI CGCG 6 cut(s) 2982, 3696, 4290, 5710, 8118, 8529
BspHI TCATGA 7 cut(s) 1141, 1696, 5266, 6451, 6613, 7534, 10309
BspMAI CTGCAG 8 cut(s) 932, 2263, 4185, 4761, 8364, 9318, 9664, 9705
BspMI ACCTGC 4 cut(s) 921, 4227, 4522, 9060
BspOI GCTAGC 3 cut(s) 2171, 9197, 9699
BspQI GCTCTTC 8 cut(s) 2058, 2521, 2775, 2856, 3482, 7794, 8661, 9943
BspT104I TTCGAA 2 cut(s) 4661, 8329
BspT107I GGYRCC 3 cut(s) 856, 5498, 7032
BspTNI GGTCTC 4 cut(s) 1925, 3373, 3698, 4209
BsrBI CCGCTC 2 cut(s) 1147, 4343
BsrFI RCCGGY 2 cut(s) 7094, 8086
BsrGI TGTACA 2 cut(s) 936, 2416
BssAI RCCGGY 2 cut(s) 7094, 8086
BssNAI GTATAC 3 cut(s) 1032, 5355, 6431
BssNI GRCGYC 3 cut(s) 6820, 7033, 8186
BssSI CACGAG 6 cut(s) 903, 4047, 6951, 8685, 9093, 10066
BssT1I CCWWGG 9 cut(s) 1107, 2457, 3507, 3729, 6210, 6932, 7036, 7108, 9228
Bst1107I GTATAC 3 cut(s) 1032, 5355, 6431
Bst2BI CACGAG 6 cut(s) 903, 4047, 6951, 8685, 9093, 10066
BstACI GRCGYC 3 cut(s) 6820, 7033, 8186
BstAPI GCANNNNNTGC 4 cut(s) 948, 1103, 3257, 5522
BstAUI TGTACA 2 cut(s) 936, 2416
BstBAI YACGTR 1 cut(s) 8243
BstBI TTCGAA 2 cut(s) 4661, 8329
BstDSI CCRYGG 6 cut(s) 2457, 3234, 3507, 6210, 7036, 9228
BstEII GGTNACC 1 cut(s) 6097
BstENI CCTNNNNNAGG 2 cut(s) 2238, 8242
BstFNI CGCG 6 cut(s) 2982, 3696, 4290, 5710, 8118, 8529
BstH2I RGCGCY 2 cut(s) 7036, 9269
BstMCI CGRYCG 2 cut(s) 1061, 2980
BstPAI GACNNNNGTC 2 cut(s) 3710, 6910
BstPI GGTNACC 1 cut(s) 6097
BstSLI GKGCMC 6 cut(s) 1153, 3874, 4054, 4488, 5503, 7296
BstUI CGCG 6 cut(s) 2982, 3696, 4290, 5710, 8118, 8529
BstV2I GAAGAC 4 cut(s) 1602, 1835, 2226, 4038
BstXI CCANNNNNNTGG 6 cut(s) 1951, 3982, 4066, 6287, 7079, 7463
BstZ17I GTATAC 3 cut(s) 1032, 5355, 6431
Bsu36I CCTNAGG 3 cut(s) 2522, 7794, 8533
BsuI GTATCC 2 cut(s) 6385, 8172
BtgI CCRYGG 6 cut(s) 2457, 3234, 3507, 6210, 7036, 9228
BtgZI GCGATG 2 cut(s) 3711, 5282
BtrI CACGTC 1 cut(s) 8952
BtsI GCAGTG 3 cut(s) 3750, 5247, 9264
BveI ACCTGC 4 cut(s) 921, 4227, 4522, 9060
CciI TCATGA 7 cut(s) 1141, 1696, 5266, 6451, 6613, 7534, 10309
Cfr10I RCCGGY 2 cut(s) 7094, 8086
CseI GACGC 3 cut(s) 4279, 5615, 8175
CsiI ACCWGGT 1 cut(s) 3609
CspCI CAANNNNNGTGG 4 cut(s) 2040, 2075, 3216, 3251
DinI GGCGCC 1 cut(s) 7034
DraI TTTAAA 3 cut(s) 822, 1474, 10342
DraIII CACNNNGTG 1 cut(s) 7583
DrdI GACNNNNNNGTC 1 cut(s) 253
DseDI GACNNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 1 cut(s) 9992
EciI GGCGGA 2 cut(s) 40, 8312
Ecl136II GAGCTC 3 cut(s) 1115, 3093, 8282
Eco130I CCWWGG 9 cut(s) 1107, 2457, 3507, 3729, 6210, 6932, 7036, 7108, 9228
Eco147I AGGCCT 5 cut(s) 4261, 5104, 7246, 8232, 8248
Eco24I GRGCYC 5 cut(s) 1117, 3095, 3496, 8284, 8686
Eco31I GGTCTC 4 cut(s) 1925, 3373, 3698, 4209
Eco32I GATATC 4 cut(s) 7915, 8476, 8741, 9415
Eco47III AGCGCT 1 cut(s) 9267
Eco53kI GAGCTC 3 cut(s) 1115, 3093, 8282
Eco81I CCTNAGG 3 cut(s) 2522, 7794, 8533
Eco88I CYCGRG 5 cut(s) 65, 6396, 7599, 9712, 10361
Eco91I GGTNACC 1 cut(s) 6097
EcoICRI GAGCTC 3 cut(s) 1115, 3093, 8282
EcoNI CCTNNNNNAGG 2 cut(s) 2238, 8242
EcoO109I RGGNCCY 4 cut(s) 3718, 5628, 9635, 9716
EcoO65I GGTNACC 1 cut(s) 6097
EcoRI GAATTC 5 cut(s) 4309, 4549, 7630, 7889, 8418
EcoRV GATATC 4 cut(s) 7915, 8476, 8741, 9415
EcoT14I CCWWGG 9 cut(s) 1107, 2457, 3507, 3729, 6210, 6932, 7036, 7108, 9228
EcoT22I ATGCAT 3 cut(s) 498, 4749, 6378
EcoT38I GRGCYC 5 cut(s) 1117, 3095, 3496, 8284, 8686
EgeI GGCGCC 1 cut(s) 7034
EheI GGCGCC 1 cut(s) 7034
ErhI CCWWGG 9 cut(s) 1107, 2457, 3507, 3729, 6210, 6932, 7036, 7108, 9228
Esp3I CGTCTC 1 cut(s) 102
FaqI GGGAC 5 cut(s) 3870, 4463, 9577, 9702, 10470
FauI CCCGC 3 cut(s) 1140, 5009, 7428
FauNDI CATATG 1 cut(s) 1660
FbaI TGATCA 6 cut(s) 2278, 6078, 6166, 6601, 6610, 9913
FblI GTMKAC 7 cut(s) 1031, 3193, 3370, 3777, 4163, 5354, 6430
FriOI GRGCYC 5 cut(s) 1117, 3095, 3496, 8284, 8686
FspI TGCGCA 1 cut(s) 9242
GsaI CCCAGC 7 cut(s) 181, 565, 1878, 2677, 3167, 4818, 9564
GsuI CTGGAG 7 cut(s) 1202, 1567, 3395, 3855, 3919, 6231, 6725
HaeII RGCGCY 2 cut(s) 7036, 9269
HapII CCGG 8 cut(s) 168, 4118, 7095, 7229, 7699, 7910, 8087, 8867
HgaI GACGC 3 cut(s) 4279, 5615, 8175
Hin1I GRCGYC 3 cut(s) 6820, 7033, 8186
HincII GTYRAC 7 cut(s) 1993, 3194, 3778, 7315, 7982, 8052, 9504
HindII GTYRAC 7 cut(s) 1993, 3194, 3778, 7315, 7982, 8052, 9504
HpaI GTTAAC 1 cut(s) 8052
HpaII CCGG 8 cut(s) 168, 4118, 7095, 7229, 7699, 7910, 8087, 8867
Hpy99I CGWCG 3 cut(s) 59, 3195, 3198
HpyCH4IV ACGT 7 cut(s) 1740, 6343, 6820, 8242, 8613, 8951, 9877
HpySE526I ACGT 7 cut(s) 1740, 6343, 6820, 8242, 8613, 8951, 9877
Hsp92I GRCGYC 3 cut(s) 6820, 7033, 8186
KasI GGCGCC 1 cut(s) 7032
KflI GGGWCCC 1 cut(s) 9716
KpnI GGTACC 1 cut(s) 860
Ksp22I TGATCA 6 cut(s) 2278, 6078, 6166, 6601, 6610, 9913
KspAI GTTAAC 1 cut(s) 8052
LguI GCTCTTC 8 cut(s) 2058, 2521, 2775, 2856, 3482, 7794, 8661, 9943
MabI ACCWGGT 1 cut(s) 3609
MaeII ACGT 7 cut(s) 1740, 6343, 6820, 8242, 8613, 8951, 9877
MbiI CCGCTC 2 cut(s) 1147, 4343
MfeI CAATTG 5 cut(s) 3409, 3470, 7136, 7764, 9156
Mly113I GGCGCC 1 cut(s) 7033
MmeI TCCRAC 8 cut(s) 1041, 1280, 1382, 2529, 3949, 5986, 6883, 8944
Mph1103I ATGCAT 3 cut(s) 498, 4749, 6378
MroXI GAANNNNTTC 8 cut(s) 641, 691, 3004, 4131, 4993, 6783, 8043, 9039
MspA1I CMGCKG 8 cut(s) 177, 1460, 2673, 4762, 6251, 7238, 7430, 8359
MspI CCGG 8 cut(s) 168, 4118, 7095, 7229, 7699, 7910, 8087, 8867
MunI CAATTG 5 cut(s) 3409, 3470, 7136, 7764, 9156
Mva1269I GAATGC 8 cut(s) 727, 2344, 2851, 6877, 6919, 7578, 8571, 9029
MvnI CGCG 6 cut(s) 2982, 3696, 4290, 5710, 8118, 8529
NarI GGCGCC 1 cut(s) 7033
NciI CCSGG 2 cut(s) 7700, 7910
NcoI CCATGG 5 cut(s) 2457, 3507, 6210, 7036, 9228
NdeI CATATG 1 cut(s) 1660
NheI GCTAGC 3 cut(s) 2167, 9193, 9695
NmeAIII GCCGAG 2 cut(s) 8578, 8882
NmuCI GTSAC 7 cut(s) 1757, 1777, 2852, 3113, 5129, 6304, 10300
NsbI TGCGCA 1 cut(s) 9242
NsiI ATGCAT 3 cut(s) 498, 4749, 6378
NspV TTCGAA 2 cut(s) 4661, 8329
OliI CACNNNNGTG 1 cut(s) 1903
PaeI GCATGC 4 cut(s) 3290, 4751, 8312, 9991
PaeR7I CTCGAG 2 cut(s) 7599, 10361
PagI TCATGA 7 cut(s) 1141, 1696, 5266, 6451, 6613, 7534, 10309
PaqCI CACCTGC 1 cut(s) 4522
PceI AGGCCT 5 cut(s) 4261, 5104, 7246, 8232, 8248
PciI ACATGT 4 cut(s) 6109, 7374, 8109, 9742
PciSI GCTCTTC 8 cut(s) 2058, 2521, 2775, 2856, 3482, 7794, 8661, 9943
PcsI WCGNNNNNNNCGW 4 cut(s) 910, 8140, 8326, 9651
PctI GAATGC 8 cut(s) 727, 2344, 2851, 6877, 6919, 7578, 8571, 9029
PdmI GAANNNNTTC 8 cut(s) 641, 691, 3004, 4131, 4993, 6783, 8043, 9039
PflFI GACNNNGTC 1 cut(s) 7044
PflMI CCANNNNNTGG 6 cut(s) 2311, 3730, 5782, 6034, 6211, 9638
PfoI TCCNGGA 1 cut(s) 29
PluTI GGCGCC 1 cut(s) 7036
Ppu21I YACGTR 1 cut(s) 8243
PpuMI RGGWCCY 3 cut(s) 3718, 5628, 9716
PscI ACATGT 4 cut(s) 6109, 7374, 8109, 9742
PshAI GACNNNNGTC 2 cut(s) 3710, 6910
PshBI ATTAAT 1 cut(s) 6726
PsiI TTATAA 2 cut(s) 782, 8139
Psp124BI GAGCTC 3 cut(s) 1117, 3095, 8284
Psp1406I AACGTT 1 cut(s) 1740
Psp5II RGGWCCY 3 cut(s) 3718, 5628, 9716
PspEI GGTNACC 1 cut(s) 6097
PspFI CCCAGC 7 cut(s) 177, 561, 1874, 2673, 3163, 4814, 9560
PspPPI RGGWCCY 3 cut(s) 3718, 5628, 9716
PspXI VCTCGAGB 1 cut(s) 7599
PsrI GAACNNNNNNTAC 2 cut(s) 1863, 1895
PstI CTGCAG 8 cut(s) 932, 2263, 4185, 4761, 8364, 9318, 9664, 9705
PsyI GACNNNGTC 1 cut(s) 7044
PvuII CAGCTG 6 cut(s) 1460, 4762, 6251, 7238, 7430, 8359
SacI GAGCTC 3 cut(s) 1117, 3095, 8284
SalI GTCGAC 2 cut(s) 3192, 3776
SapI GCTCTTC 8 cut(s) 2058, 2521, 2775, 2856, 3482, 7794, 8661, 9943
ScaI AGTACT 3 cut(s) 327, 763, 2197
SexAI ACCWGGT 1 cut(s) 3609
SfoI GGCGCC 1 cut(s) 7034
Sfr274I CTCGAG 2 cut(s) 7599, 10361
SfuI TTCGAA 2 cut(s) 4661, 8329
SgrDI CGTCGACG 1 cut(s) 3192
SlaI CTCGAG 2 cut(s) 7599, 10361
SmlI CTYRAG 8 cut(s) 4904, 6467, 7115, 7599, 8910, 9443, 10349, 10361
SmoI CTYRAG 8 cut(s) 4904, 6467, 7115, 7599, 8910, 9443, 10349, 10361
SpeI ACTAGT 1 cut(s) 2987
SphI GCATGC 4 cut(s) 3290, 4751, 8312, 9991
SseBI AGGCCT 5 cut(s) 4261, 5104, 7246, 8232, 8248
SspDI GGCGCC 1 cut(s) 7032
SspI AATATT 5 cut(s) 1336, 4876, 5673, 9574, 10428
SstI GAGCTC 3 cut(s) 1117, 3095, 8284
StuI AGGCCT 5 cut(s) 4261, 5104, 7246, 8232, 8248
StyI CCWWGG 9 cut(s) 1107, 2457, 3507, 3729, 6210, 6932, 7036, 7108, 9228
TaiI ACGT 7 cut(s) 1743, 6346, 6823, 8245, 8616, 8954, 9880
TaqII GACCGA 1 cut(s) 2966
TauI GCSGC 4 cut(s) 217, 6878, 8571, 9994
TseFI GTSAC 7 cut(s) 1757, 1777, 2852, 3113, 5129, 6304, 10300
Tsp45I GTSAC 7 cut(s) 1757, 1777, 2852, 3113, 5129, 6304, 10300
TspGWI ACGGA 6 cut(s) 902, 3006, 3223, 3567, 4883, 9788
Tth111I GACNNNGTC 1 cut(s) 7044
Van91I CCANNNNNTGG 6 cut(s) 2311, 3730, 5782, 6034, 6211, 9638
VneI GTGCAC 1 cut(s) 4050
VspI ATTAAT 1 cut(s) 6726
XagI CCTNNNNNAGG 2 cut(s) 2238, 8242
XbaI TCTAGA 6 cut(s) 2773, 5341, 6088, 6815, 10000, 10384
XcmI CCANNNNNNNNNTGG 5 cut(s) 2791, 6287, 7079, 7463, 9727
XhoI CTCGAG 2 cut(s) 7599, 10361
XmaJI CCTAGG 1 cut(s) 6932
XmiI GTMKAC 7 cut(s) 1031, 3193, 3370, 3777, 4163, 5354, 6430
XmnI GAANNNNTTC 8 cut(s) 641, 691, 3004, 4131, 4993, 6783, 8043, 9039
ZraI GACGTC 1 cut(s) 6821
ZrmI AGTACT 3 cut(s) 327, 763, 2197
Zsp2I ATGCAT 3 cut(s) 498, 4749, 6378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.