MD15G1410500.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0006230
Physical Location & Seq
Reverse (-)
51019532 .. 51023844
4313 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1410500.v1.1.491

Sequence Viewer

Length: 2394 bp
ATGGGTTCGAAGAGCAAGAGGCACAGAAAGCGCCGCAGCCCTGCAATGGAAGAAGCCCCAACTCCCAATCACACTCCCCCTCTCAACTTCCAAACCCTAATCTCTGCAATTCAATCCCCTGAGGGTCTGAAGATGCCTCTTTTGAAAAGATTGTGCTTTCTACTTGCCCCGCTGTCGCGAAATGAAACAATGCACTTTTCGAACTTTGAAGGTGCTCTCAATAATGGCGGGGTTGAAGTGAAACTTGGAGATATACAATGTCTCATTTATGTTTTGTACAAAGAGCTAGATAGGAGGTTTAAACTGTTCTTTTCCGCTTTATGTGATGTATCTGCAACAAGGGGACCGAGGCACGTTGATTCCCACACAGATATGTCGGCCGCTCCTGATGAACTACCGCTGCTTCTGAGATGTTGCATCCTAGTCTTGACCTTGGCTGACCCTACTATCCTAGTGGAGAAAACCCAATTTCTTCTCTCTGTACTACGGAAATTGATTTCTTTGGTTACAAGCGGAGGAGATGAGAAAAACAACTCTGTCACCTTTCAGAAGTTTGTTTCTTCCAGATGCACGTTCACTGATGCTGTTGGTTCTTCTACTACTGTTTCCGAAGATTTTGTTTCTTCCTTATGTTTGATAGAGGTTTCTGATCCATGGTGTCCTGCACTATCTGCCGTGCTCGAGATATTTGCAGATGAACTTGTAATGTGTAGATTGCTGAGAGAGTACTTTATTCTTGTTGATTCTTCTTCATGCACAACTGAAATGCTGTTTCGGTGCCACGCTGTCAAAGGTGATATTGGAAGTGTTCTGGAGGTGATTTCTGCCCATTTTATCTTGTCAGTTTATGGAAAGCGAGCATATAGGAACTTCCTCAAAAGATTATTCTGTGATTTCGGGAAGCATTGTAGAGTTCCCGAACTGAGCCTGAAAGCTACAGTGATATTGCTTCTCAACCCCATCATGCTGTCAGCACCCAAAATGTTGCAGACACATTTGTTTTTATTGGTTTCTGAATCTATTGATGTAGACATGTCTTTGAATGCTAGACCAGATCTTAGACTTATGGACTGCTACCTAACAGCATTTGAAAGGTCTGTCCTTTTATATACCAGCCACATGTCTAGTTCACTTATGGATTTCCATCGTTTGGGTGTTAAATGTTCTTCTTCTTCTTCTACCGGTTCACGTATGCTAGGGAGAAGTTGTCAACCTTCATTTGAATCGTATATTCAACAAGTTACGAGAGATAAAATGTGTGATCTAGTTACCCATTCTGATTCGTTATGGGACTCGTATTTGCGCGATATGTTCTGTGGAACAAAATCTGACCTGATGGATTCTGCTGTTGCATACATAAATGAGAGCCAACATGTTTTTGATGAATCATGTAAAGATGATATAGTGTCCGTCTTGCGAAGCATAATACATGGAAGTTTTTCTTGTGGTGTTGGTGATAGTGTGCTGTATAGAAAAGGGGATACGAGTCCCCAAGATATTTATCTTCTTGCTTCCATATTGAAGTTAATGAGTACTTCGTTGTTGAAAGCTATTTGGTGTCTAAGGCATGGTGGGCATTTGGGCTCTCCAAAAACCTTAAAAGACGCTTCTTCAAAGGAATATGATTTCATAGTGGGTGTCATTGGCTGTTTTCACCAGTTCAATGTGTCTCTACCTAATCAAAAGTTCTTATTAGACATGATGAACACCCACCCGTCGATGCATAAGGCTTCCAAGTGGATGCTTCTGCACTTTTCAGGCTTGCTGTCCTTGGGTTTTGGTAGTGGGATTGATTTCTTAGTTAAGGGCTGCATATCTACAATCATGTCACTATTAAATCTATATGTTTACGAAGATGGTGATATGGTTGCACTCAGCTCACTTCTACTCTCTGGCTCACGAACTTCTTCATCTGGATTGCCTTCAGACAAGATTACAGGGGGCTTGGCGAAAAAGAAATCTACCAGAAGAGTTGCATCGAAATTTCAGAAAATTCAAACACTTCACTTGAGCAAAGTTTCTCTCACAAACTCCCATCGGAGATCACAGAGCGAGGTAGCAGAAACTACGGAAAATGCATGCATCATGAGGTGCACAACGGAATCTAGTGATGGCATTGAAGAGAAAACAGAGGAAACCTGCAACGGGAAGGTTTTTCTCAATCTCTTACTAGGAAGATCCCAGGAATCTGAGATAGAGGAGTTAGCGGACTTCATTGCGTGCGAACCTGGGAGGGATTATTCTAGTTGGTTGAAGGATCTACAAAAGTATCGAGGGATGATGTATAAAAAAAAGAGAGCAGCAAGGTGGGAGAAGAGGAAATATGCTTGGAAATGTATGTTAAGAAAGAAATCAGCAAATGTGGTAAGAGCTGCTTCTGCGTACTTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

798

Amino Acids

89.15

Weight (kDa)

8.67

Isoelectric Point (pI)

53.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7812 PF25104 134 - 625 5.5e-208 Domain of unknown function (DUF7812)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2147
AccB1I GGYRCC 1 cut(s) 777
AccB7I CCANNNNNTGG 1 cut(s) 1150
AccBSI CCGCTC 1 cut(s) 383
AccI GTMKAC 1 cut(s) 1029
AccII CGCG 2 cut(s) 178, 1305
AciI CCGC 8 cut(s) 34, 170, 228, 315, 381, 398, 513, 2207
AclWI GGATC 3 cut(s) 644, 2172, 2265
AcoI YGGCCR 1 cut(s) 378
AcsI RAATTY 2 cut(s) 1982, 1992
AcuI CTGAAG 2 cut(s) 149, 1908
AfaI GTAC 5 cut(s) 278, 483, 728, 1534, 2384
AfiI CCNNNNNNNGG 3 cut(s) 46, 1150, 2145
AflIII ACRYGT 3 cut(s) 1032, 1119, 1372
AgeI ACCGGT 1 cut(s) 1181
AjnI CCWGG 2 cut(s) 2181, 2227
AjuI GAANNNNNNNTTGG 2 cut(s) 228, 260
AluBI AGCT 5 cut(s) 286, 935, 1550, 1878, 2372
AluI AGCT 5 cut(s) 286, 935, 1550, 1878, 2372
Alw21I GWGCWC 3 cut(s) 217, 681, 2096
Alw26I GTCTC 2 cut(s) 266, 1674
Alw44I GTGCAC 1 cut(s) 2092
AlwI GGATC 3 cut(s) 644, 2172, 2265
Ama87I CYCGRG 1 cut(s) 680
AoxI GGCC 1 cut(s) 378
ApaLI GTGCAC 1 cut(s) 2092
ApeKI GCWGC 5 cut(s) 36, 400, 1809, 2300, 2372
ApoI RAATTY 2 cut(s) 1982, 1992
AsiGI ACCGGT 1 cut(s) 1181
Asp700I GAANNNNTTC 2 cut(s) 1438, 1906
AspLEI GCGC 2 cut(s) 33, 1305
AspS9I GGNCC 1 cut(s) 344
AsuHPI GGTGA 6 cut(s) 532, 806, 829, 1466, 1646, 1871
AsuII TTCGAA 2 cut(s) 8, 200
AvaI CYCGRG 1 cut(s) 680
AvaII GGWCC 1 cut(s) 344
AxyI CCTNAGG 1 cut(s) 120
BaeGI GKGCMC 1 cut(s) 2096
BaeI ACNNNNGTAYC 2 cut(s) 2252, 2285
BanI GGYRCC 1 cut(s) 777
BanII GRGCYC 1 cut(s) 1586
Bbv12I GWGCWC 3 cut(s) 217, 681, 2096
BbvI GCAGC 5 cut(s) 48, 387, 1796, 2312, 2359
BccI CCATC 6 cut(s) 968, 1152, 1330, 1850, 2043, 2105
BceAI ACGGC 1 cut(s) 659
BcgI CGANNNNNNTGC 2 cut(s) 671, 705
BciT130I CCWGG 2 cut(s) 2183, 2229
BciVI GTATCC 1 cut(s) 1474
BcoDI GTCTC 2 cut(s) 266, 1674
BfmI CTRYAG 1 cut(s) 936
BfoI RGCGCY 1 cut(s) 34
BfuAI ACCTGC 1 cut(s) 2147
BfuI GTATCC 1 cut(s) 1474
BglII AGATCT 1 cut(s) 1054
BisI GCNGC 7 cut(s) 34, 37, 381, 401, 1810, 2301, 2373
BlsI GCNGC 7 cut(s) 35, 38, 382, 402, 1811, 2302, 2374
BmcAI AGTACT 2 cut(s) 728, 1534
Bme1390I CCNGG 2 cut(s) 2183, 2229
Bme18I GGWCC 1 cut(s) 344
BmeT110I CYCGRG 1 cut(s) 680
BmgT120I GGNCC 1 cut(s) 344
BmiI GGNNCC 2 cut(s) 345, 779
BmrFI CCNGG 2 cut(s) 2183, 2229
BmsI GCATC 8 cut(s) 123, 426, 557, 571, 1710, 1731, 1985, 2091
BpmI CTGGAG 1 cut(s) 833
Bpu14I TTCGAA 2 cut(s) 8, 200
BpuEI CTTGAG 1 cut(s) 2029
BsaAI YACGTR 1 cut(s) 1190
BsaBI GATNNNNATC 2 cut(s) 1143, 1500
BsaJI CCNNGG 6 cut(s) 347, 432, 653, 1770, 2181, 2228
BsaWI WCCGGW 1 cut(s) 1181
BsaXI ACNNNNNCTCC 2 cut(s) 1192, 1222
Bsc4I CCNNNNNNNGG 3 cut(s) 46, 1150, 2145
Bse118I RCCGGY 1 cut(s) 1181
Bse1I ACTGG 1 cut(s) 1657
Bse21I CCTNAGG 1 cut(s) 120
Bse3DI GCAATG 2 cut(s) 51, 2214
Bse8I GATNNNNATC 2 cut(s) 1143, 1500
BseBI CCWGG 2 cut(s) 2183, 2229
BseDI CCNNGG 6 cut(s) 347, 432, 653, 1770, 2181, 2228
BseGI GGATG 3 cut(s) 417, 1746, 2283
BseJI GATNNNNATC 2 cut(s) 1143, 1500
BseLI CCNNNNNNNGG 3 cut(s) 46, 1150, 2145
BseMI GCAATG 2 cut(s) 51, 2214
BseMII CTCAG 6 cut(s) 111, 398, 710, 914, 1888, 2181
BseNI ACTGG 1 cut(s) 1657
BseRI GAGGAG 2 cut(s) 531, 2213
BseSI GKGCMC 1 cut(s) 2096
BseX3I CGGCCG 1 cut(s) 378
BseXI GCAGC 5 cut(s) 48, 387, 1796, 2312, 2359
BsgI GTGCAG 2 cut(s) 648, 1733
Bsh1236I CGCG 2 cut(s) 178, 1305
Bsh1285I CGRYCG 1 cut(s) 381
BshFI GGCC 1 cut(s) 380
BshNI GGYRCC 1 cut(s) 777
BshTI ACCGGT 1 cut(s) 1181
BsiEI CGRYCG 1 cut(s) 381
BsiHKAI GWGCWC 3 cut(s) 217, 681, 2096
BsiHKCI CYCGRG 1 cut(s) 680
BsiSI CCGG 1 cut(s) 1182
BslFI GGGAC 3 cut(s) 357, 1304, 1473
BslI CCNNNNNNNGG 3 cut(s) 46, 1150, 2145
BsmAI GTCTC 2 cut(s) 266, 1674
BsmFI GGGAC 3 cut(s) 357, 1304, 1473
BsmI GAATGC 1 cut(s) 1048
BsnI GGCC 1 cut(s) 380
BsoBI CYCGRG 1 cut(s) 680
Bsp119I TTCGAA 2 cut(s) 8, 200
Bsp1286I GDGCHC 4 cut(s) 217, 681, 1586, 2096
Bsp1407I TGTACA 1 cut(s) 276
Bsp143I GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
Bsp19I CCATGG 1 cut(s) 653
Bsp68I TCGCGA 1 cut(s) 178
BspACI CCGC 8 cut(s) 34, 170, 228, 315, 381, 398, 513, 2207
BspANI GGCC 1 cut(s) 380
BspCNI CTCAG 6 cut(s) 112, 399, 711, 915, 1887, 2182
BspFNI CGCG 2 cut(s) 178, 1305
BspHI TCATGA 1 cut(s) 2085
BspLI GGNNCC 2 cut(s) 345, 779
BspMI ACCTGC 1 cut(s) 2147
BspPI GGATC 3 cut(s) 644, 2172, 2265
BspQI GCTCTTC 1 cut(s) 5
BspT104I TTCGAA 2 cut(s) 8, 200
BspT107I GGYRCC 1 cut(s) 777
BsrBI CCGCTC 1 cut(s) 383
BsrDI GCAATG 2 cut(s) 51, 2214
BsrFI RCCGGY 1 cut(s) 1181
BsrGI TGTACA 1 cut(s) 276
BsrI ACTGG 1 cut(s) 1657
BssAI RCCGGY 1 cut(s) 1181
BssECI CCNNGG 6 cut(s) 347, 432, 653, 1770, 2181, 2228
BssMI GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
BssT1I CCWWGG 3 cut(s) 432, 653, 1770
Bst2UI CCWGG 2 cut(s) 2183, 2229
Bst4CI ACNGT 3 cut(s) 306, 604, 940
Bst6I CTCTTC 4 cut(s) 5, 1963, 2115, 2309
BstAPI GCANNNNNTGC 1 cut(s) 671
BstAUI TGTACA 1 cut(s) 276
BstBAI YACGTR 1 cut(s) 1190
BstBI TTCGAA 2 cut(s) 8, 200
BstC8I GCNNGC 4 cut(s) 858, 1763, 2080, 2221
BstDEI CTNAG 9 cut(s) 120, 407, 719, 923, 1058, 1562, 1798, 1874, 2190
BstDSI CCRYGG 1 cut(s) 653
BstF5I GGATG 3 cut(s) 417, 1746, 2283
BstFNI CGCG 2 cut(s) 178, 1305
BstH2I RGCGCY 1 cut(s) 34
BstHHI GCGC 2 cut(s) 33, 1305
BstKTI GATC 6 cut(s) 652, 1057, 1264, 2045, 2180, 2260
BstMAI GTCTC 2 cut(s) 266, 1674
BstMBI GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
BstMCI CGRYCG 1 cut(s) 381
BstMWI GCNNNNNNNGC 4 cut(s) 28, 671, 1573, 2378
BstNI CCWGG 2 cut(s) 2183, 2229
BstNSI RCATGY 4 cut(s) 1036, 1123, 1376, 2082
BstSCI CCNGG 2 cut(s) 2181, 2227
BstSFI CTRYAG 1 cut(s) 936
BstSLI GKGCMC 1 cut(s) 2096
BstUI CGCG 2 cut(s) 178, 1305
BstV1I GCAGC 5 cut(s) 48, 387, 1796, 2312, 2359
BstX2I RGATCY 3 cut(s) 1054, 2177, 2257
BstYI RGATCY 3 cut(s) 1054, 2177, 2257
BstZI CGGCCG 1 cut(s) 378
Bsu36I CCTNAGG 1 cut(s) 120
BsuI GTATCC 1 cut(s) 1474
BsuRI GGCC 1 cut(s) 380
BtgI CCRYGG 1 cut(s) 653
BtsCI GGATG 3 cut(s) 417, 1746, 2283
BtsIMutI CAGTG 2 cut(s) 576, 945
BtuMI TCGCGA 1 cut(s) 178
BveI ACCTGC 1 cut(s) 2147
Cac8I GCNNGC 4 cut(s) 858, 1763, 2080, 2221
CciI TCATGA 1 cut(s) 2085
CfoI GCGC 2 cut(s) 33, 1305
Cfr10I RCCGGY 1 cut(s) 1181
Cfr13I GGNCC 1 cut(s) 344
CseI GACGC 1 cut(s) 1613
Csp6I GTAC 5 cut(s) 277, 482, 727, 1533, 2383
CspAI ACCGGT 1 cut(s) 1181
CviQI GTAC 5 cut(s) 277, 482, 727, 1533, 2383
DdeI CTNAG 9 cut(s) 120, 407, 719, 923, 1058, 1562, 1798, 1874, 2190
DpnI GATC 6 cut(s) 651, 1056, 1263, 2044, 2179, 2259
DpnII GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
DraI TTTAAA 1 cut(s) 301
EaeI YGGCCR 1 cut(s) 378
EagI CGGCCG 1 cut(s) 378
Eam1104I CTCTTC 4 cut(s) 5, 1963, 2115, 2309
EarI CTCTTC 4 cut(s) 5, 1963, 2115, 2309
EclXI CGGCCG 1 cut(s) 378
Eco130I CCWWGG 3 cut(s) 432, 653, 1770
Eco24I GRGCYC 1 cut(s) 1586
Eco47I GGWCC 1 cut(s) 344
Eco52I CGGCCG 1 cut(s) 378
Eco57I CTGAAG 2 cut(s) 149, 1908
Eco81I CCTNAGG 1 cut(s) 120
Eco88I CYCGRG 1 cut(s) 680
EcoRII CCWGG 2 cut(s) 2181, 2227
EcoT14I CCWWGG 3 cut(s) 432, 653, 1770
EcoT22I ATGCAT 3 cut(s) 1725, 2080, 2084
EcoT38I GRGCYC 1 cut(s) 1586
ErhI CCWWGG 3 cut(s) 432, 653, 1770
FalI AAGNNNNNCTT 6 cut(s) 228, 260, 1426, 1458, 2359, 2391
FaqI GGGAC 3 cut(s) 357, 1304, 1473
FauI CCCGC 2 cut(s) 177, 221
FblI GTMKAC 1 cut(s) 1029
Fnu4HI GCNGC 7 cut(s) 34, 37, 381, 401, 1810, 2301, 2373
FokI GGATG 3 cut(s) 404, 1753, 2290
FriOI GRGCYC 1 cut(s) 1586
Fsp4HI GCNGC 7 cut(s) 34, 37, 381, 401, 1810, 2301, 2373
GlaI GCGC 2 cut(s) 32, 1304
GluI GCNGC 7 cut(s) 34, 37, 381, 401, 1810, 2301, 2373
GsuI CTGGAG 1 cut(s) 833
HaeII RGCGCY 1 cut(s) 34
HaeIII GGCC 1 cut(s) 380
HapII CCGG 1 cut(s) 1182
HgaI GACGC 1 cut(s) 1613
HhaI GCGC 2 cut(s) 33, 1305
Hin6I GCGC 2 cut(s) 31, 1303
HinP1I GCGC 2 cut(s) 31, 1303
HincII GTYRAC 1 cut(s) 1211
HindII GTYRAC 1 cut(s) 1211
HpaII CCGG 1 cut(s) 1182
HphI GGTGA 6 cut(s) 532, 806, 829, 1466, 1646, 1871
Hpy166II GTNNAC 7 cut(s) 576, 1030, 1130, 1187, 1211, 1849, 2094
Hpy8I GTNNAC 7 cut(s) 576, 1030, 1130, 1187, 1211, 1849, 2094
Hpy99I CGWCG 1 cut(s) 1720
HpyAV CCTTC 5 cut(s) 203, 1224, 1932, 2143, 2248
HpyCH4III ACNGT 3 cut(s) 306, 604, 940
HpyCH4IV ACGT 3 cut(s) 354, 572, 1189
HpyF10VI GCNNNNNNNGC 4 cut(s) 28, 671, 1573, 2378
HpyF3I CTNAG 9 cut(s) 120, 407, 719, 923, 1058, 1562, 1798, 1874, 2190
HpySE526I ACGT 3 cut(s) 354, 572, 1189
HspAI GCGC 2 cut(s) 31, 1303
Kzo9I GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
LguI GCTCTTC 1 cut(s) 5
LmnI GCTCC 1 cut(s) 388
Lsp1109I GCAGC 5 cut(s) 48, 387, 1796, 2312, 2359
LweI GCATC 8 cut(s) 123, 426, 557, 571, 1710, 1731, 1985, 2091
MaeII ACGT 3 cut(s) 354, 572, 1189
MaeIII GTNAC 5 cut(s) 505, 538, 1240, 1267, 1827
MalI GATC 6 cut(s) 651, 1056, 1263, 2044, 2179, 2259
MbiI CCGCTC 1 cut(s) 383
MboI GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
MflI RGATCY 3 cut(s) 1054, 2177, 2257
MhlI GDGCHC 4 cut(s) 217, 681, 1586, 2096
MluCI AATT 5 cut(s) 108, 467, 491, 1982, 1992
MlyI GAGTC 2 cut(s) 1286, 1495
Mph1103I ATGCAT 3 cut(s) 1725, 2080, 2084
MroXI GAANNNNTTC 2 cut(s) 1438, 1906
MseI TTAA 8 cut(s) 300, 1158, 1526, 1598, 1803, 1835, 2342, 2392
MslI CAYNNNNRTG 1 cut(s) 371
MspA1I CMGCKG 2 cut(s) 172, 400
MspI CCGG 1 cut(s) 1182
MspR9I CCNGG 2 cut(s) 2183, 2229
MssI GTTTAAAC 1 cut(s) 301
Mva1269I GAATGC 1 cut(s) 1048
MvaI CCWGG 2 cut(s) 2183, 2229
MvnI CGCG 2 cut(s) 178, 1305
MwoI GCNNNNNNNGC 4 cut(s) 28, 671, 1573, 2378
NcoI CCATGG 1 cut(s) 653
NdeII GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
NlaIV GGNNCC 2 cut(s) 345, 779
NmuCI GTSAC 2 cut(s) 538, 1827
NruI TCGCGA 1 cut(s) 178
NsiI ATGCAT 3 cut(s) 1725, 2080, 2084
NspI RCATGY 4 cut(s) 1036, 1123, 1376, 2082
NspV TTCGAA 2 cut(s) 8, 200
PaeI GCATGC 1 cut(s) 2082
PaeR7I CTCGAG 1 cut(s) 680
PagI TCATGA 1 cut(s) 2085
PciI ACATGT 3 cut(s) 1032, 1119, 1372
PciSI GCTCTTC 1 cut(s) 5
PctI GAATGC 1 cut(s) 1048
PdmI GAANNNNTTC 2 cut(s) 1438, 1906
PfeI GAWTC 9 cut(s) 359, 743, 1016, 1223, 1280, 1340, 1385, 2102, 2186
PflMI CCANNNNNTGG 1 cut(s) 1150
PinAI ACCGGT 1 cut(s) 1181
PkrI GCNGC 7 cut(s) 35, 38, 382, 402, 1811, 2302, 2374
PleI GAGTC 2 cut(s) 1286, 1494
PmeI GTTTAAAC 1 cut(s) 301
PpsI GAGTC 2 cut(s) 1286, 1494
Ppu21I YACGTR 1 cut(s) 1190
PscI ACATGT 3 cut(s) 1032, 1119, 1372
Psp6I CCWGG 2 cut(s) 2181, 2227
PspGI CCWGG 2 cut(s) 2181, 2227
PspN4I GGNNCC 2 cut(s) 345, 779
PspPI GGNCC 1 cut(s) 344
PsuI RGATCY 3 cut(s) 1054, 2177, 2257
RruI TCGCGA 1 cut(s) 178
RsaI GTAC 5 cut(s) 278, 483, 728, 1534, 2384
RsaNI GTAC 5 cut(s) 277, 482, 727, 1533, 2383
RseI CAYNNNNRTG 1 cut(s) 371
SapI GCTCTTC 1 cut(s) 5
SaqAI TTAA 8 cut(s) 300, 1158, 1526, 1598, 1803, 1835, 2342, 2392
SatI GCNGC 7 cut(s) 34, 37, 381, 401, 1810, 2301, 2373
Sau3AI GATC 6 cut(s) 649, 1054, 1261, 2042, 2177, 2257
Sau96I GGNCC 1 cut(s) 344
ScaI AGTACT 2 cut(s) 728, 1534
SchI GAGTC 2 cut(s) 1286, 1495
ScrFI CCNGG 2 cut(s) 2183, 2229
SduI GDGCHC 4 cut(s) 217, 681, 1586, 2096
SfaNI GCATC 8 cut(s) 123, 426, 557, 571, 1710, 1731, 1985, 2091
SfcI CTRYAG 1 cut(s) 936
Sfr274I CTCGAG 1 cut(s) 680
SfuI TTCGAA 2 cut(s) 8, 200
SinI GGWCC 1 cut(s) 344
SlaI CTCGAG 1 cut(s) 680
SmiMI CAYNNNNRTG 1 cut(s) 371
SmlI CTYRAG 2 cut(s) 680, 2008
SmoI CTYRAG 2 cut(s) 680, 2008
SphI GCATGC 1 cut(s) 2082
Sse9I AATT 5 cut(s) 108, 467, 491, 1982, 1992
SsiI CCGC 8 cut(s) 34, 170, 228, 315, 381, 398, 513, 2207
StyD4I CCNGG 2 cut(s) 2181, 2227
StyI CCWWGG 3 cut(s) 432, 653, 1770
TaaI ACNGT 3 cut(s) 306, 604, 940
TaiI ACGT 3 cut(s) 357, 575, 1192
TaqI TCGA 6 cut(s) 8, 200, 681, 1718, 1979, 2272
TaqII GACCGA 1 cut(s) 361
TasI AATT 5 cut(s) 108, 467, 491, 1982, 1992
TatI WGTACW 4 cut(s) 276, 481, 726, 1532
TauI GCSGC 2 cut(s) 36, 383
TfiI GAWTC 9 cut(s) 359, 743, 1016, 1223, 1280, 1340, 1385, 2102, 2186
Tru1I TTAA 8 cut(s) 300, 1158, 1526, 1598, 1803, 1835, 2342, 2392
Tru9I TTAA 8 cut(s) 300, 1158, 1526, 1598, 1803, 1835, 2342, 2392
TscAI CASTG 2 cut(s) 583, 945
TseFI GTSAC 2 cut(s) 538, 1827
TseI GCWGC 5 cut(s) 36, 400, 1809, 2300, 2372
Tsp45I GTSAC 2 cut(s) 538, 1827
TspGWI ACGGA 4 cut(s) 502, 1399, 2084, 2114
TspRI CASTG 2 cut(s) 583, 945
Van91I CCANNNNNTGG 1 cut(s) 1150
VneI GTGCAC 1 cut(s) 2092
VpaK11BI GGWCC 1 cut(s) 344
XapI RAATTY 2 cut(s) 1982, 1992
XceI RCATGY 4 cut(s) 1036, 1123, 1376, 2082
XhoI CTCGAG 1 cut(s) 680
XmiI GTMKAC 1 cut(s) 1029
XmnI GAANNNNTTC 2 cut(s) 1438, 1906
ZrmI AGTACT 2 cut(s) 728, 1534
Zsp2I ATGCAT 3 cut(s) 1725, 2080, 2084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.