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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27510 AT4G27510 |
| fragaria_vesca | FvH4_5g32290 |
| malus_domestica | MD15G1410500.v1.1 |
| prunus_persica | Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 |
| pyrus_communis | pycom15g36540 |
| rosa_chinensis | RchiOBHm_Chr5g0040361 RchiOBHm_Chr7g0228481 |
| rosa_laevigata | RLG00000001560 |
| rosa_multiflora | Rmu_sc0004041.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00231110 |
| rosa_rugosa | Rorug07G0249900 Rorug07G0250000 Rorug07G0250100 Rorug07G0250200.1 |
| rosa_samantha | Rh7AG346000 Rh7AG402100 Rh7BG383100 Rh7CG421100 Rh7DG398200 |
| rosa_wichuraiana | Rw7G033430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1987 |
| AccB1I | GGYRCC | 2 cut(s) | 99, 939 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1312 |
| AccBSI | CCGCTC | 1 cut(s) | 545 |
| AccI | GTMKAC | 2 cut(s) | 1191, 2010 |
| AciI | CCGC | 6 cut(s) | 196, 332, 390, 477, 543, 1734 |
| AclWI | GGATC | 2 cut(s) | 806, 2207 |
| AcoI | YGGCCR | 1 cut(s) | 540 |
| AcsI | RAATTY | 3 cut(s) | 2141, 2151, 2188 |
| AcuI | CTGAAG | 2 cut(s) | 311, 2067 |
| AcyI | GRCGYC | 1 cut(s) | 100 |
| AfaI | GTAC | 4 cut(s) | 440, 645, 890, 1696 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 208, 1312 |
| AflII | CTTAAG | 1 cut(s) | 2167 |
| AflIII | ACRYGT | 3 cut(s) | 1194, 1281, 1534 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 390, 422, 719, 751 |
| AluBI | AGCT | 4 cut(s) | 448, 1097, 1712, 2040 |
| AluI | AGCT | 4 cut(s) | 448, 1097, 1712, 2040 |
| Alw21I | GWGCWC | 2 cut(s) | 379, 734 |
| Alw26I | GTCTC | 2 cut(s) | 428, 1836 |
| Alw44I | GTGCAC | 1 cut(s) | 730 |
| AlwI | GGATC | 2 cut(s) | 806, 2207 |
| AoxI | GGCC | 2 cut(s) | 25, 540 |
| ApaI | GGGCCC | 1 cut(s) | 29 |
| ApaLI | GTGCAC | 1 cut(s) | 730 |
| ApeKI | GCWGC | 2 cut(s) | 1097, 1971 |
| ApoI | RAATTY | 3 cut(s) | 2141, 2151, 2188 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 74, 106 |
| AseI | ATTAAT | 1 cut(s) | 68 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1600 |
| AspLEI | GCGC | 2 cut(s) | 102, 195 |
| AspS9I | GGNCC | 4 cut(s) | 5, 25, 26, 506 |
| AsuHPI | GGTGA | 6 cut(s) | 694, 968, 991, 1808, 2033, 2119 |
| AvaII | GGWCC | 2 cut(s) | 5, 506 |
| AxyI | CCTNAGG | 1 cut(s) | 282 |
| BaeGI | GKGCMC | 2 cut(s) | 29, 734 |
| BanI | GGYRCC | 2 cut(s) | 99, 939 |
| BanII | GRGCYC | 2 cut(s) | 29, 1748 |
| BbsI | GAAGAC | 1 cut(s) | 68 |
| Bbv12I | GWGCWC | 2 cut(s) | 379, 734 |
| BbvI | GCAGC | 2 cut(s) | 1084, 1958 |
| BccI | CCATC | 9 cut(s) | 58, 157, 380, 1130, 1314, 1492, 1885, 2012, 2202 |
| BciVI | GTATCC | 1 cut(s) | 1636 |
| BcoDI | GTCTC | 2 cut(s) | 428, 1836 |
| BfaI | CTAG | 6 cut(s) | 449, 614, 1209, 1287, 1427, 2048 |
| BfmI | CTRYAG | 3 cut(s) | 149, 834, 1098 |
| BfoI | RGCGCY | 2 cut(s) | 103, 196 |
| BfrI | CTTAAG | 1 cut(s) | 2167 |
| BfuI | GTATCC | 1 cut(s) | 1636 |
| BglII | AGATCT | 1 cut(s) | 1216 |
| BisI | GCNGC | 4 cut(s) | 196, 543, 1098, 1972 |
| BlsI | GCNGC | 4 cut(s) | 197, 544, 1099, 1973 |
| BmcAI | AGTACT | 2 cut(s) | 890, 1696 |
| Bme18I | GGWCC | 2 cut(s) | 5, 506 |
| BmgT120I | GGNCC | 4 cut(s) | 5, 25, 26, 506 |
| BmiI | GGNNCC | 5 cut(s) | 6, 27, 101, 507, 941 |
| BmsI | GCATC | 5 cut(s) | 285, 588, 733, 1893, 2144 |
| BpiI | GAAGAC | 1 cut(s) | 68 |
| BpmI | CTGGAG | 1 cut(s) | 995 |
| BpuEI | CTTGAG | 1 cut(s) | 863 |
| Bsa29I | ATCGAT | 2 cut(s) | 1880, 2202 |
| BsaAI | YACGTR | 1 cut(s) | 1352 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1305, 1662 |
| BsaHI | GRCGYC | 1 cut(s) | 100 |
| BsaJI | CCNNGG | 4 cut(s) | 509, 594, 815, 1932 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1354, 1384 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 208, 1312 |
| Bse1I | ACTGG | 2 cut(s) | 1348, 1819 |
| Bse21I | CCTNAGG | 1 cut(s) | 282 |
| Bse3DI | GCAATG | 1 cut(s) | 213 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1305, 1662 |
| BseCI | ATCGAT | 2 cut(s) | 1880, 2202 |
| BseDI | CCNNGG | 4 cut(s) | 509, 594, 815, 1932 |
| BseGI | GGATG | 2 cut(s) | 50, 1908 |
| BseJI | GATNNNNATC | 2 cut(s) | 1305, 1662 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 208, 1312 |
| BseMI | GCAATG | 1 cut(s) | 213 |
| BseMII | CTCAG | 6 cut(s) | 122, 273, 560, 872, 1076, 2050 |
| BseNI | ACTGG | 2 cut(s) | 1348, 1819 |
| BseRI | GAGGAG | 1 cut(s) | 693 |
| BseSI | GKGCMC | 2 cut(s) | 29, 734 |
| BseX3I | CGGCCG | 1 cut(s) | 540 |
| BseXI | GCAGC | 2 cut(s) | 1084, 1958 |
| BseYI | CCCAGC | 1 cut(s) | 1357 |
| BsgI | GTGCAG | 2 cut(s) | 36, 1895 |
| Bsh1285I | CGRYCG | 1 cut(s) | 543 |
| BshFI | GGCC | 2 cut(s) | 27, 542 |
| BshNI | GGYRCC | 2 cut(s) | 99, 939 |
| BshVI | ATCGAT | 2 cut(s) | 1880, 2202 |
| BsiEI | CGRYCG | 1 cut(s) | 543 |
| BsiHKAI | GWGCWC | 2 cut(s) | 379, 734 |
| BslFI | GGGAC | 3 cut(s) | 18, 519, 1466 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 208, 1312 |
| BsmAI | GTCTC | 2 cut(s) | 428, 1836 |
| BsmFI | GGGAC | 3 cut(s) | 18, 519, 1466 |
| BsmI | GAATGC | 1 cut(s) | 1210 |
| BsnI | GGCC | 2 cut(s) | 27, 542 |
| Bsp120I | GGGCCC | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 4 cut(s) | 29, 379, 734, 1748 |
| Bsp1407I | TGTACA | 1 cut(s) | 438 |
| Bsp143I | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| Bsp19I | CCATGG | 1 cut(s) | 815 |
| BspACI | CCGC | 6 cut(s) | 196, 332, 390, 477, 543, 1734 |
| BspANI | GGCC | 2 cut(s) | 27, 542 |
| BspCNI | CTCAG | 6 cut(s) | 123, 274, 561, 873, 1077, 2049 |
| BspDI | ATCGAT | 2 cut(s) | 1880, 2202 |
| BspLI | GGNNCC | 5 cut(s) | 6, 27, 101, 507, 941 |
| BspMAI | CTGCAG | 3 cut(s) | 153, 838, 1102 |
| BspPI | GGATC | 2 cut(s) | 806, 2207 |
| BspQI | GCTCTTC | 1 cut(s) | 167 |
| BspT107I | GGYRCC | 2 cut(s) | 99, 939 |
| BspTI | CTTAAG | 1 cut(s) | 2167 |
| BsrBI | CCGCTC | 1 cut(s) | 545 |
| BsrDI | GCAATG | 1 cut(s) | 213 |
| BsrGI | TGTACA | 1 cut(s) | 438 |
| BsrI | ACTGG | 2 cut(s) | 1348, 1819 |
| BssECI | CCNNGG | 4 cut(s) | 509, 594, 815, 1932 |
| BssMI | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| BssNAI | GTATAC | 1 cut(s) | 2011 |
| BssNI | GRCGYC | 1 cut(s) | 100 |
| BssT1I | CCWWGG | 4 cut(s) | 509, 594, 815, 1932 |
| Bst1107I | GTATAC | 1 cut(s) | 2011 |
| Bst4CI | ACNGT | 3 cut(s) | 468, 766, 1929 |
| Bst6I | CTCTTC | 2 cut(s) | 167, 2122 |
| BstACI | GRCGYC | 1 cut(s) | 100 |
| BstAFI | CTTAAG | 1 cut(s) | 2167 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 833 |
| BstAUI | TGTACA | 1 cut(s) | 438 |
| BstBAI | YACGTR | 1 cut(s) | 1352 |
| BstC8I | GCNNGC | 2 cut(s) | 1020, 1736 |
| BstDSI | CCRYGG | 1 cut(s) | 815 |
| BstF5I | GGATG | 2 cut(s) | 50, 1908 |
| BstH2I | RGCGCY | 2 cut(s) | 103, 196 |
| BstHHI | GCGC | 2 cut(s) | 102, 195 |
| BstKTI | GATC | 6 cut(s) | 125, 814, 1219, 1426, 2202, 2206 |
| BstMAI | GTCTC | 2 cut(s) | 428, 1836 |
| BstMBI | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| BstMCI | CGRYCG | 1 cut(s) | 543 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 190, 833, 1735 |
| BstNSI | RCATGY | 3 cut(s) | 1198, 1285, 1538 |
| BstSFI | CTRYAG | 3 cut(s) | 149, 834, 1098 |
| BstSLI | GKGCMC | 2 cut(s) | 29, 734 |
| BstV1I | GCAGC | 2 cut(s) | 1084, 1958 |
| BstV2I | GAAGAC | 1 cut(s) | 68 |
| BstX2I | RGATCY | 1 cut(s) | 1216 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 36, 57 |
| BstYI | RGATCY | 1 cut(s) | 1216 |
| BstZ17I | GTATAC | 1 cut(s) | 2011 |
| BstZI | CGGCCG | 1 cut(s) | 540 |
| Bsu15I | ATCGAT | 2 cut(s) | 1880, 2202 |
| Bsu36I | CCTNAGG | 1 cut(s) | 282 |
| BsuI | GTATCC | 1 cut(s) | 1636 |
| BsuRI | GGCC | 2 cut(s) | 27, 542 |
| BsuTUI | ATCGAT | 2 cut(s) | 1880, 2202 |
| BtgI | CCRYGG | 1 cut(s) | 815 |
| BtsCI | GGATG | 2 cut(s) | 50, 1908 |
| BtsI | GCAGTG | 3 cut(s) | 560, 843, 1107 |
| BtsIMutI | CAGTG | 4 cut(s) | 560, 738, 843, 1107 |
| Cac8I | GCNNGC | 2 cut(s) | 1020, 1736 |
| CfoI | GCGC | 2 cut(s) | 102, 195 |
| Cfr13I | GGNCC | 4 cut(s) | 5, 25, 26, 506 |
| ClaI | ATCGAT | 2 cut(s) | 1880, 2202 |
| CseI | GACGC | 2 cut(s) | 1557, 1775 |
| Csp6I | GTAC | 4 cut(s) | 439, 644, 889, 1695 |
| CviQI | GTAC | 4 cut(s) | 439, 644, 889, 1695 |
| DinI | GGCGCC | 1 cut(s) | 101 |
| DpnI | GATC | 6 cut(s) | 124, 813, 1218, 1425, 2201, 2205 |
| DpnII | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| DraI | TTTAAA | 1 cut(s) | 463 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1987 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1987 |
| EaeI | YGGCCR | 1 cut(s) | 540 |
| EagI | CGGCCG | 1 cut(s) | 540 |
| Eam1104I | CTCTTC | 2 cut(s) | 167, 2122 |
| EarI | CTCTTC | 2 cut(s) | 167, 2122 |
| EclXI | CGGCCG | 1 cut(s) | 540 |
| Eco130I | CCWWGG | 4 cut(s) | 509, 594, 815, 1932 |
| Eco24I | GRGCYC | 2 cut(s) | 29, 1748 |
| Eco47I | GGWCC | 2 cut(s) | 5, 506 |
| Eco52I | CGGCCG | 1 cut(s) | 540 |
| Eco57I | CTGAAG | 2 cut(s) | 311, 2067 |
| Eco81I | CCTNAGG | 1 cut(s) | 282 |
| EcoO109I | RGGNCCY | 1 cut(s) | 5 |
| EcoT14I | CCWWGG | 4 cut(s) | 509, 594, 815, 1932 |
| EcoT38I | GRGCYC | 2 cut(s) | 29, 1748 |
| EgeI | GGCGCC | 1 cut(s) | 101 |
| EheI | GGCGCC | 1 cut(s) | 101 |
| ErhI | CCWWGG | 4 cut(s) | 509, 594, 815, 1932 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 390, 422, 1588, 1620 |
| FaqI | GGGAC | 3 cut(s) | 18, 519, 1466 |
| FauI | CCCGC | 2 cut(s) | 383, 1727 |
| FauNDI | CATATG | 1 cut(s) | 1024 |
| FblI | GTMKAC | 2 cut(s) | 1191, 2010 |
| Fnu4HI | GCNGC | 4 cut(s) | 196, 543, 1098, 1972 |
| FokI | GGATG | 2 cut(s) | 37, 1915 |
| FriOI | GRGCYC | 2 cut(s) | 29, 1748 |
| Fsp4HI | GCNGC | 4 cut(s) | 196, 543, 1098, 1972 |
| FspBI | CTAG | 6 cut(s) | 449, 614, 1209, 1287, 1427, 2048 |
| GlaI | GCGC | 2 cut(s) | 101, 194 |
| GluI | GCNGC | 4 cut(s) | 196, 543, 1098, 1972 |
| GsaI | CCCAGC | 1 cut(s) | 1361 |
| GsuI | CTGGAG | 1 cut(s) | 995 |
| HaeII | RGCGCY | 2 cut(s) | 103, 196 |
| HaeIII | GGCC | 2 cut(s) | 27, 542 |
| HgaI | GACGC | 2 cut(s) | 1557, 1775 |
| HhaI | GCGC | 2 cut(s) | 102, 195 |
| Hin1I | GRCGYC | 1 cut(s) | 100 |
| Hin6I | GCGC | 2 cut(s) | 100, 193 |
| HinP1I | GCGC | 2 cut(s) | 100, 193 |
| HincII | GTYRAC | 1 cut(s) | 1373 |
| HindII | GTYRAC | 1 cut(s) | 1373 |
| HphI | GGTGA | 6 cut(s) | 694, 968, 991, 1808, 2033, 2119 |
| Hpy166II | GTNNAC | 8 cut(s) | 732, 738, 1192, 1292, 1349, 1373, 1652, 2011 |
| Hpy188III | TCNNGA | 5 cut(s) | 548, 589, 974, 1079, 2073 |
| Hpy8I | GTNNAC | 8 cut(s) | 732, 738, 1192, 1292, 1349, 1373, 1652, 2011 |
| HpyAV | CCTTC | 3 cut(s) | 365, 1386, 2091 |
| HpyCH4III | ACNGT | 3 cut(s) | 468, 766, 1929 |
| HpyCH4IV | ACGT | 4 cut(s) | 156, 516, 734, 1351 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 190, 833, 1735 |
| HpySE526I | ACGT | 4 cut(s) | 156, 516, 734, 1351 |
| Hsp92I | GRCGYC | 1 cut(s) | 100 |
| HspAI | GCGC | 2 cut(s) | 100, 193 |
| KasI | GGCGCC | 1 cut(s) | 99 |
| Kzo9I | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| LguI | GCTCTTC | 1 cut(s) | 167 |
| LmnI | GCTCC | 2 cut(s) | 334, 550 |
| Lsp1109I | GCAGC | 2 cut(s) | 1084, 1958 |
| LweI | GCATC | 5 cut(s) | 285, 588, 733, 1893, 2144 |
| MaeI | CTAG | 6 cut(s) | 449, 614, 1209, 1287, 1427, 2048 |
| MaeII | ACGT | 4 cut(s) | 156, 516, 734, 1351 |
| MaeIII | GTNAC | 5 cut(s) | 667, 700, 1402, 1429, 1989 |
| MalI | GATC | 6 cut(s) | 124, 813, 1218, 1425, 2201, 2205 |
| MbiI | CCGCTC | 1 cut(s) | 545 |
| MboI | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| MflI | RGATCY | 1 cut(s) | 1216 |
| MhlI | GDGCHC | 4 cut(s) | 29, 379, 734, 1748 |
| MluCI | AATT | 7 cut(s) | 65, 270, 629, 653, 2141, 2151, 2188 |
| Mly113I | GGCGCC | 1 cut(s) | 100 |
| MlyI | GAGTC | 3 cut(s) | 1394, 1448, 1657 |
| MmeI | TCCRAC | 1 cut(s) | 149 |
| MnlI | CCTC | 8 cut(s) | 174, 252, 277, 450, 671, 796, 970, 1046 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1600 |
| MseI | TTAA | 8 cut(s) | 68, 462, 1320, 1688, 1760, 1965, 1997, 2168 |
| MslI | CAYNNNNRTG | 2 cut(s) | 55, 533 |
| MspA1I | CMGCKG | 1 cut(s) | 334 |
| MspCI | CTTAAG | 1 cut(s) | 2167 |
| MssI | GTTTAAAC | 1 cut(s) | 463 |
| Mva1269I | GAATGC | 1 cut(s) | 1210 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 190, 833, 1735 |
| NarI | GGCGCC | 1 cut(s) | 100 |
| NcoI | CCATGG | 1 cut(s) | 815 |
| NdeI | CATATG | 1 cut(s) | 1024 |
| NdeII | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 27, 101, 507, 941 |
| NmuCI | GTSAC | 2 cut(s) | 700, 1989 |
| NspI | RCATGY | 3 cut(s) | 1198, 1285, 1538 |
| PciI | ACATGT | 3 cut(s) | 1194, 1281, 1534 |
| PciSI | GCTCTTC | 1 cut(s) | 167 |
| PctI | GAATGC | 1 cut(s) | 1210 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1600 |
| PfeI | GAWTC | 7 cut(s) | 135, 521, 905, 1178, 1442, 1502, 1547 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1312 |
| PkrI | GCNGC | 4 cut(s) | 197, 544, 1099, 1973 |
| PleI | GAGTC | 3 cut(s) | 1393, 1448, 1656 |
| PluTI | GGCGCC | 1 cut(s) | 103 |
| PmeI | GTTTAAAC | 1 cut(s) | 463 |
| PpsI | GAGTC | 3 cut(s) | 1393, 1448, 1656 |
| Ppu21I | YACGTR | 1 cut(s) | 1352 |
| PpuMI | RGGWCCY | 1 cut(s) | 5 |
| PscI | ACATGT | 3 cut(s) | 1194, 1281, 1534 |
| PshBI | ATTAAT | 1 cut(s) | 68 |
| Psp5II | RGGWCCY | 1 cut(s) | 5 |
| PspFI | CCCAGC | 1 cut(s) | 1357 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 27, 101, 507, 941 |
| PspOMI | GGGCCC | 1 cut(s) | 25 |
| PspPI | GGNCC | 4 cut(s) | 5, 25, 26, 506 |
| PspPPI | RGGWCCY | 1 cut(s) | 5 |
| PstI | CTGCAG | 3 cut(s) | 153, 838, 1102 |
| PsuI | RGATCY | 1 cut(s) | 1216 |
| RsaI | GTAC | 4 cut(s) | 440, 645, 890, 1696 |
| RsaNI | GTAC | 4 cut(s) | 439, 644, 889, 1695 |
| RseI | CAYNNNNRTG | 2 cut(s) | 55, 533 |
| SapI | GCTCTTC | 1 cut(s) | 167 |
| SaqAI | TTAA | 8 cut(s) | 68, 462, 1320, 1688, 1760, 1965, 1997, 2168 |
| SatI | GCNGC | 4 cut(s) | 196, 543, 1098, 1972 |
| Sau3AI | GATC | 6 cut(s) | 122, 811, 1216, 1423, 2199, 2203 |
| Sau96I | GGNCC | 4 cut(s) | 5, 25, 26, 506 |
| ScaI | AGTACT | 2 cut(s) | 890, 1696 |
| SchI | GAGTC | 3 cut(s) | 1394, 1448, 1657 |
| SduI | GDGCHC | 4 cut(s) | 29, 379, 734, 1748 |
| SfaNI | GCATC | 5 cut(s) | 285, 588, 733, 1893, 2144 |
| SfcI | CTRYAG | 3 cut(s) | 149, 834, 1098 |
| SfoI | GGCGCC | 1 cut(s) | 101 |
| SinI | GGWCC | 2 cut(s) | 5, 506 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 55, 533 |
| SmlI | CTYRAG | 2 cut(s) | 842, 2167 |
| SmoI | CTYRAG | 2 cut(s) | 842, 2167 |
| Sse9I | AATT | 7 cut(s) | 65, 270, 629, 653, 2141, 2151, 2188 |
| SsiI | CCGC | 6 cut(s) | 196, 332, 390, 477, 543, 1734 |
| SspDI | GGCGCC | 1 cut(s) | 99 |
| SspMI | CTAG | 6 cut(s) | 449, 614, 1209, 1287, 1427, 2048 |
| StyI | CCWWGG | 4 cut(s) | 509, 594, 815, 1932 |
| TaaI | ACNGT | 3 cut(s) | 468, 766, 1929 |
| TaiI | ACGT | 4 cut(s) | 159, 519, 737, 1354 |
| TaqI | TCGA | 4 cut(s) | 1880, 1979, 2138, 2202 |
| TasI | AATT | 7 cut(s) | 65, 270, 629, 653, 2141, 2151, 2188 |
| TatI | WGTACW | 4 cut(s) | 438, 643, 888, 1694 |
| TauI | GCSGC | 2 cut(s) | 198, 545 |
| TfiI | GAWTC | 7 cut(s) | 135, 521, 905, 1178, 1442, 1502, 1547 |
| Tru1I | TTAA | 8 cut(s) | 68, 462, 1320, 1688, 1760, 1965, 1997, 2168 |
| Tru9I | TTAA | 8 cut(s) | 68, 462, 1320, 1688, 1760, 1965, 1997, 2168 |
| TscAI | CASTG | 4 cut(s) | 567, 745, 843, 1107 |
| TseFI | GTSAC | 2 cut(s) | 700, 1989 |
| TseI | GCWGC | 2 cut(s) | 1097, 1971 |
| Tsp45I | GTSAC | 2 cut(s) | 700, 1989 |
| TspDTI | ATGAA | 9 cut(s) | 360, 567, 873, 985, 1368, 1560, 1780, 1880, 2058 |
| TspGWI | ACGGA | 3 cut(s) | 128, 664, 1561 |
| TspRI | CASTG | 4 cut(s) | 567, 745, 843, 1107 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1312 |
| Vha464I | CTTAAG | 1 cut(s) | 2167 |
| VneI | GTGCAC | 1 cut(s) | 730 |
| VpaK11BI | GGWCC | 2 cut(s) | 5, 506 |
| VspI | ATTAAT | 1 cut(s) | 68 |
| XapI | RAATTY | 3 cut(s) | 2141, 2151, 2188 |
| XceI | RCATGY | 3 cut(s) | 1198, 1285, 1538 |
| XmiI | GTMKAC | 2 cut(s) | 1191, 2010 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1600 |
| XspI | CTAG | 6 cut(s) | 449, 614, 1209, 1287, 1427, 2048 |
| ZrmI | AGTACT | 2 cut(s) | 890, 1696 |