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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27510 AT4G27510 |
| fragaria_vesca | FvH4_5g32290 |
| malus_domestica | MD15G1410500.v1.1 |
| prunus_persica | Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 Prupe.1G552000_v2.0.a1 |
| pyrus_communis | pycom15g36540 |
| rosa_chinensis | RchiOBHm_Chr5g0040361 RchiOBHm_Chr7g0228481 |
| rosa_laevigata | RLG00000001560 |
| rosa_multiflora | Rmu_sc0004041.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00231110 |
| rosa_rugosa | Rorug07G0249900 Rorug07G0250000 Rorug07G0250100 Rorug07G0250200.1 |
| rosa_samantha | Rh7AG346000 Rh7AG402100 Rh7BG383100 Rh7CG421100 Rh7DG398200 |
| rosa_wichuraiana | Rw7G033430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2114 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1150 |
| AccI | GTMKAC | 1 cut(s) | 1026 |
| AciI | CCGC | 3 cut(s) | 137, 315, 935 |
| AclWI | GGATC | 2 cut(s) | 641, 2232 |
| AcsI | RAATTY | 6 cut(s) | 563, 762, 1245, 1973, 1983, 2250 |
| AcuI | CTGAAG | 3 cut(s) | 627, 1032, 2019 |
| AfaI | GTAC | 7 cut(s) | 155, 483, 572, 725, 1109, 1525, 2062 |
| AfeI | AGCGCT | 1 cut(s) | 32 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 46, 1150, 2112 |
| AflIII | ACRYGT | 3 cut(s) | 1029, 1119, 1656 |
| AhlI | ACTAGT | 1 cut(s) | 163 |
| AjiI | CACGTC | 2 cut(s) | 1030, 1659 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2278, 2310 |
| AluBI | AGCT | 6 cut(s) | 133, 286, 492, 1541, 1869, 2145 |
| AluI | AGCT | 6 cut(s) | 133, 286, 492, 1541, 1869, 2145 |
| Alw21I | GWGCWC | 1 cut(s) | 354 |
| Alw26I | GTCTC | 2 cut(s) | 1665, 2096 |
| AlwI | GGATC | 2 cut(s) | 641, 2232 |
| Aor51HI | AGCGCT | 1 cut(s) | 32 |
| AoxI | GGCC | 1 cut(s) | 429 |
| ApeKI | GCWGC | 5 cut(s) | 33, 36, 133, 982, 1800 |
| ApoI | RAATTY | 6 cut(s) | 563, 762, 1245, 1973, 1983, 2250 |
| AseI | ATTAAT | 1 cut(s) | 267 |
| AspLEI | GCGC | 2 cut(s) | 33, 215 |
| AspS9I | GGNCC | 2 cut(s) | 21, 125 |
| AsuHPI | GGTGA | 5 cut(s) | 76, 803, 826, 1637, 1951 |
| AsuII | TTCGAA | 1 cut(s) | 8 |
| AvaII | GGWCC | 2 cut(s) | 21, 125 |
| AxyI | CCTNAGG | 2 cut(s) | 120, 1553 |
| BauI | CACGAG | 1 cut(s) | 1234 |
| BbsI | GAAGAC | 1 cut(s) | 1703 |
| Bbv12I | GWGCWC | 1 cut(s) | 354 |
| BbvI | GCAGC | 5 cut(s) | 20, 48, 120, 969, 1787 |
| BccI | CCATC | 3 cut(s) | 1060, 1152, 1321 |
| BceAI | ACGGC | 1 cut(s) | 1919 |
| BcoDI | GTCTC | 2 cut(s) | 1665, 2096 |
| BcuI | ACTAGT | 1 cut(s) | 163 |
| BfaI | CTAG | 9 cut(s) | 164, 452, 485, 1047, 1187, 1256, 1773, 1877, 2138 |
| BfmI | CTRYAG | 2 cut(s) | 34, 983 |
| BfoI | RGCGCY | 2 cut(s) | 34, 216 |
| BfuAI | ACCTGC | 1 cut(s) | 2114 |
| BglII | AGATCT | 1 cut(s) | 1054 |
| BisI | GCNGC | 6 cut(s) | 34, 37, 134, 137, 983, 1801 |
| BlsI | GCNGC | 6 cut(s) | 35, 38, 135, 138, 984, 1802 |
| BmcAI | AGTACT | 2 cut(s) | 725, 1525 |
| Bme18I | GGWCC | 2 cut(s) | 21, 125 |
| BmgBI | CACGTC | 2 cut(s) | 1030, 1659 |
| BmgT120I | GGNCC | 2 cut(s) | 21, 125 |
| BmiI | GGNNCC | 1 cut(s) | 126 |
| BmsI | GCATC | 2 cut(s) | 1722, 1921 |
| BpiI | GAAGAC | 1 cut(s) | 1703 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 515, 547, 1183, 1215 |
| BpmI | CTGGAG | 1 cut(s) | 830 |
| Bpu14I | TTCGAA | 1 cut(s) | 8 |
| BpuEI | CTTGAG | 3 cut(s) | 266, 698, 2020 |
| BsaAI | YACGTR | 2 cut(s) | 570, 1348 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1143, 1491 |
| BsaI | GGTCTC | 1 cut(s) | 2096 |
| BsaJI | CCNNGG | 4 cut(s) | 432, 650, 1149, 1935 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 46, 1150, 2112 |
| Bse1I | ACTGG | 1 cut(s) | 1648 |
| Bse21I | CCTNAGG | 2 cut(s) | 120, 1553 |
| Bse3DI | GCAATG | 5 cut(s) | 51, 941, 1871, 1974, 2116 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1143, 1491 |
| BseDI | CCNNGG | 4 cut(s) | 432, 650, 1149, 1935 |
| BseGI | GGATG | 3 cut(s) | 1144, 1737, 2250 |
| BseJI | GATNNNNATC | 2 cut(s) | 1143, 1491 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 46, 1150, 2112 |
| BseMI | GCAATG | 5 cut(s) | 51, 941, 1871, 1974, 2116 |
| BseMII | CTCAG | 4 cut(s) | 111, 707, 911, 1879 |
| BseNI | ACTGG | 1 cut(s) | 1648 |
| BseRI | GAGGAG | 5 cut(s) | 531, 536, 2071, 2102, 2114 |
| BseXI | GCAGC | 5 cut(s) | 20, 48, 120, 969, 1787 |
| BsgI | GTGCAG | 1 cut(s) | 690 |
| BshFI | GGCC | 1 cut(s) | 431 |
| BsiHKAI | GWGCWC | 1 cut(s) | 354 |
| BslFI | GGGAC | 2 cut(s) | 1295, 1464 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 46, 1150, 2112 |
| BsmAI | GTCTC | 2 cut(s) | 1665, 2096 |
| BsmBI | CGTCTC | 1 cut(s) | 1665 |
| BsmFI | GGGAC | 2 cut(s) | 1295, 1464 |
| BsmI | GAATGC | 1 cut(s) | 1048 |
| BsnI | GGCC | 1 cut(s) | 431 |
| Bso31I | GGTCTC | 1 cut(s) | 2096 |
| Bsp119I | TTCGAA | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 1 cut(s) | 354 |
| Bsp1407I | TGTACA | 1 cut(s) | 1107 |
| Bsp143I | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| BspACI | CCGC | 3 cut(s) | 137, 315, 935 |
| BspANI | GGCC | 1 cut(s) | 431 |
| BspCNI | CTCAG | 4 cut(s) | 112, 708, 912, 1878 |
| BspHI | TCATGA | 1 cut(s) | 2052 |
| BspLI | GGNNCC | 1 cut(s) | 126 |
| BspMAI | CTGCAG | 2 cut(s) | 38, 987 |
| BspMI | ACCTGC | 1 cut(s) | 2114 |
| BspPI | GGATC | 2 cut(s) | 641, 2232 |
| BspQI | GCTCTTC | 1 cut(s) | 276 |
| BspT104I | TTCGAA | 1 cut(s) | 8 |
| BspTNI | GGTCTC | 1 cut(s) | 2096 |
| BsrDI | GCAATG | 5 cut(s) | 51, 941, 1871, 1974, 2116 |
| BsrGI | TGTACA | 1 cut(s) | 1107 |
| BsrI | ACTGG | 1 cut(s) | 1648 |
| BssECI | CCNNGG | 4 cut(s) | 432, 650, 1149, 1935 |
| BssMI | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| BssSI | CACGAG | 1 cut(s) | 1234 |
| BssT1I | CCWWGG | 2 cut(s) | 432, 1149 |
| Bst2BI | CACGAG | 1 cut(s) | 1234 |
| Bst4CI | ACNGT | 4 cut(s) | 174, 601, 1175, 1453 |
| Bst6I | CTCTTC | 6 cut(s) | 5, 276, 311, 603, 1839, 1954 |
| BstAUI | TGTACA | 1 cut(s) | 1107 |
| BstBAI | YACGTR | 2 cut(s) | 570, 1348 |
| BstBI | TTCGAA | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 4 cut(s) | 851, 855, 1184, 1754 |
| BstDSI | CCRYGG | 2 cut(s) | 650, 1935 |
| BstEII | GGTNACC | 1 cut(s) | 1924 |
| BstF5I | GGATG | 3 cut(s) | 1144, 1737, 2250 |
| BstH2I | RGCGCY | 2 cut(s) | 34, 216 |
| BstHHI | GCGC | 2 cut(s) | 33, 215 |
| BstKTI | GATC | 5 cut(s) | 223, 649, 1057, 1255, 2227 |
| BstMAI | GTCTC | 2 cut(s) | 1665, 2096 |
| BstMBI | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 113, 712 |
| BstNSI | RCATGY | 2 cut(s) | 1123, 1186 |
| BstPI | GGTNACC | 1 cut(s) | 1924 |
| BstSFI | CTRYAG | 2 cut(s) | 34, 983 |
| BstSNI | TACGTA | 1 cut(s) | 1348 |
| BstV1I | GCAGC | 5 cut(s) | 20, 48, 120, 969, 1787 |
| BstV2I | GAAGAC | 1 cut(s) | 1703 |
| BstX2I | RGATCY | 2 cut(s) | 646, 1054 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1124 |
| BstYI | RGATCY | 2 cut(s) | 646, 1054 |
| Bsu36I | CCTNAGG | 2 cut(s) | 120, 1553 |
| BsuRI | GGCC | 1 cut(s) | 431 |
| BtgI | CCRYGG | 2 cut(s) | 650, 1935 |
| BtrI | CACGTC | 2 cut(s) | 1030, 1659 |
| BtsCI | GGATG | 3 cut(s) | 1144, 1737, 2250 |
| BtsI | GCAGTG | 1 cut(s) | 678 |
| BtsIMutI | CAGTG | 6 cut(s) | 170, 573, 597, 678, 779, 1458 |
| BveI | ACCTGC | 1 cut(s) | 2114 |
| Cac8I | GCNNGC | 4 cut(s) | 851, 855, 1184, 1754 |
| CciI | TCATGA | 1 cut(s) | 2052 |
| CfoI | GCGC | 2 cut(s) | 33, 215 |
| Cfr13I | GGNCC | 2 cut(s) | 21, 125 |
| Csp6I | GTAC | 7 cut(s) | 154, 482, 571, 724, 1108, 1524, 2061 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2255, 2290 |
| CviQI | GTAC | 7 cut(s) | 154, 482, 571, 724, 1108, 1524, 2061 |
| DpnI | GATC | 5 cut(s) | 222, 648, 1056, 1254, 2226 |
| DpnII | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| DraI | TTTAAA | 2 cut(s) | 180, 301 |
| Eam1104I | CTCTTC | 6 cut(s) | 5, 276, 311, 603, 1839, 1954 |
| EarI | CTCTTC | 6 cut(s) | 5, 276, 311, 603, 1839, 1954 |
| Eco105I | TACGTA | 1 cut(s) | 1348 |
| Eco130I | CCWWGG | 2 cut(s) | 432, 1149 |
| Eco31I | GGTCTC | 1 cut(s) | 2096 |
| Eco32I | GATATC | 2 cut(s) | 819, 1630 |
| Eco47I | GGWCC | 2 cut(s) | 21, 125 |
| Eco47III | AGCGCT | 1 cut(s) | 32 |
| Eco57I | CTGAAG | 3 cut(s) | 627, 1032, 2019 |
| Eco81I | CCTNAGG | 2 cut(s) | 120, 1553 |
| Eco91I | GGTNACC | 1 cut(s) | 1924 |
| EcoO65I | GGTNACC | 1 cut(s) | 1924 |
| EcoRV | GATATC | 2 cut(s) | 819, 1630 |
| EcoT14I | CCWWGG | 2 cut(s) | 432, 1149 |
| EcoT22I | ATGCAT | 1 cut(s) | 1184 |
| ErhI | CCWWGG | 2 cut(s) | 432, 1149 |
| Esp3I | CGTCTC | 1 cut(s) | 1665 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 228, 260, 1417, 1449 |
| FaqI | GGGAC | 2 cut(s) | 1295, 1464 |
| FauNDI | CATATG | 1 cut(s) | 993 |
| FblI | GTMKAC | 1 cut(s) | 1026 |
| Fnu4HI | GCNGC | 6 cut(s) | 34, 37, 134, 137, 983, 1801 |
| FokI | GGATG | 3 cut(s) | 1131, 1744, 2257 |
| Fsp4HI | GCNGC | 6 cut(s) | 34, 37, 134, 137, 983, 1801 |
| FspBI | CTAG | 9 cut(s) | 164, 452, 485, 1047, 1187, 1256, 1773, 1877, 2138 |
| GlaI | GCGC | 2 cut(s) | 32, 214 |
| GluI | GCNGC | 6 cut(s) | 34, 37, 134, 137, 983, 1801 |
| GsuI | CTGGAG | 1 cut(s) | 830 |
| HaeII | RGCGCY | 2 cut(s) | 34, 216 |
| HaeIII | GGCC | 1 cut(s) | 431 |
| HhaI | GCGC | 2 cut(s) | 33, 215 |
| Hin6I | GCGC | 2 cut(s) | 31, 213 |
| HinP1I | GCGC | 2 cut(s) | 31, 213 |
| HphI | GGTGA | 5 cut(s) | 76, 803, 826, 1637, 1951 |
| Hpy166II | GTNNAC | 5 cut(s) | 573, 1027, 1110, 1130, 1889 |
| Hpy188III | TCNNGA | 7 cut(s) | 347, 809, 914, 1234, 1905, 2053, 2228 |
| Hpy8I | GTNNAC | 5 cut(s) | 573, 1027, 1110, 1130, 1889 |
| HpyAV | CCTTC | 8 cut(s) | 97, 203, 230, 651, 1064, 1215, 2194, 2215 |
| HpyCH4III | ACNGT | 4 cut(s) | 174, 601, 1175, 1453 |
| HpyCH4IV | ACGT | 4 cut(s) | 569, 1029, 1347, 1658 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 113, 712 |
| HpySE526I | ACGT | 4 cut(s) | 569, 1029, 1347, 1658 |
| HspAI | GCGC | 2 cut(s) | 31, 213 |
| Kzo9I | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| LguI | GCTCTTC | 1 cut(s) | 276 |
| LmnI | GCTCC | 4 cut(s) | 349, 489, 1410, 2150 |
| Lsp1109I | GCAGC | 5 cut(s) | 20, 48, 120, 969, 1787 |
| LweI | GCATC | 2 cut(s) | 1722, 1921 |
| MaeI | CTAG | 9 cut(s) | 164, 452, 485, 1047, 1187, 1256, 1773, 1877, 2138 |
| MaeII | ACGT | 4 cut(s) | 569, 1029, 1347, 1658 |
| MaeIII | GTNAC | 7 cut(s) | 68, 166, 505, 1231, 1258, 1471, 1924 |
| MalI | GATC | 5 cut(s) | 222, 648, 1056, 1254, 2226 |
| MboI | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| MfeI | CAATTG | 1 cut(s) | 2128 |
| MflI | RGATCY | 2 cut(s) | 646, 1054 |
| MhlI | GDGCHC | 1 cut(s) | 354 |
| MlyI | GAGTC | 2 cut(s) | 655, 2078 |
| MmeI | TCCRAC | 1 cut(s) | 683 |
| Mph1103I | ATGCAT | 1 cut(s) | 1184 |
| MslI | CAYNNNNRTG | 2 cut(s) | 371, 1833 |
| MssI | GTTTAAAC | 1 cut(s) | 301 |
| MunI | CAATTG | 1 cut(s) | 2128 |
| Mva1269I | GAATGC | 1 cut(s) | 1048 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 113, 712 |
| NdeI | CATATG | 1 cut(s) | 993 |
| NdeII | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| NlaIV | GGNNCC | 1 cut(s) | 126 |
| NmuCI | GTSAC | 2 cut(s) | 68, 1231 |
| NsiI | ATGCAT | 1 cut(s) | 1184 |
| NspI | RCATGY | 2 cut(s) | 1123, 1186 |
| NspV | TTCGAA | 1 cut(s) | 8 |
| PaeI | GCATGC | 1 cut(s) | 1186 |
| PagI | TCATGA | 1 cut(s) | 2052 |
| PciI | ACATGT | 1 cut(s) | 1119 |
| PciSI | GCTCTTC | 1 cut(s) | 276 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1664 |
| PctI | GAATGC | 1 cut(s) | 1048 |
| PfeI | GAWTC | 8 cut(s) | 740, 1214, 1265, 1271, 1376, 1574, 1669, 2009 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1150 |
| PkrI | GCNGC | 6 cut(s) | 35, 38, 135, 138, 984, 1802 |
| PleI | GAGTC | 2 cut(s) | 655, 2077 |
| PmeI | GTTTAAAC | 1 cut(s) | 301 |
| PpsI | GAGTC | 2 cut(s) | 655, 2077 |
| Ppu21I | YACGTR | 2 cut(s) | 570, 1348 |
| PscI | ACATGT | 1 cut(s) | 1119 |
| PshBI | ATTAAT | 1 cut(s) | 267 |
| PspEI | GGTNACC | 1 cut(s) | 1924 |
| PspN4I | GGNNCC | 1 cut(s) | 126 |
| PspPI | GGNCC | 2 cut(s) | 21, 125 |
| PstI | CTGCAG | 2 cut(s) | 38, 987 |
| PsuI | RGATCY | 2 cut(s) | 646, 1054 |
| RsaI | GTAC | 7 cut(s) | 155, 483, 572, 725, 1109, 1525, 2062 |
| RsaNI | GTAC | 7 cut(s) | 154, 482, 571, 724, 1108, 1524, 2061 |
| RseI | CAYNNNNRTG | 2 cut(s) | 371, 1833 |
| SapI | GCTCTTC | 1 cut(s) | 276 |
| SatI | GCNGC | 6 cut(s) | 34, 37, 134, 137, 983, 1801 |
| Sau3AI | GATC | 5 cut(s) | 220, 646, 1054, 1252, 2224 |
| Sau96I | GGNCC | 2 cut(s) | 21, 125 |
| ScaI | AGTACT | 2 cut(s) | 725, 1525 |
| SchI | GAGTC | 2 cut(s) | 655, 2078 |
| SduI | GDGCHC | 1 cut(s) | 354 |
| SfaNI | GCATC | 2 cut(s) | 1722, 1921 |
| SfcI | CTRYAG | 2 cut(s) | 34, 983 |
| SfuI | TTCGAA | 1 cut(s) | 8 |
| SinI | GGWCC | 2 cut(s) | 21, 125 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 371, 1833 |
| SmlI | CTYRAG | 3 cut(s) | 245, 677, 1999 |
| SmoI | CTYRAG | 3 cut(s) | 245, 677, 1999 |
| SnaBI | TACGTA | 1 cut(s) | 1348 |
| SpeI | ACTAGT | 1 cut(s) | 163 |
| SphI | GCATGC | 1 cut(s) | 1186 |
| SsiI | CCGC | 3 cut(s) | 137, 315, 935 |
| SspMI | CTAG | 9 cut(s) | 164, 452, 485, 1047, 1187, 1256, 1773, 1877, 2138 |
| StyI | CCWWGG | 2 cut(s) | 432, 1149 |
| TaaI | ACNGT | 4 cut(s) | 174, 601, 1175, 1453 |
| TaiI | ACGT | 4 cut(s) | 572, 1032, 1350, 1661 |
| TaqI | TCGA | 5 cut(s) | 8, 219, 1686, 2227, 2239 |
| TatI | WGTACW | 6 cut(s) | 153, 481, 723, 1107, 1523, 2060 |
| TauI | GCSGC | 1 cut(s) | 139 |
| TfiI | GAWTC | 8 cut(s) | 740, 1214, 1265, 1271, 1376, 1574, 1669, 2009 |
| TscAI | CASTG | 6 cut(s) | 177, 580, 604, 678, 779, 1458 |
| TseFI | GTSAC | 2 cut(s) | 68, 1231 |
| TseI | GCWGC | 5 cut(s) | 33, 36, 133, 982, 1800 |
| Tsp45I | GTSAC | 2 cut(s) | 68, 1231 |
| TspGWI | ACGGA | 3 cut(s) | 639, 1423, 1695 |
| TspRI | CASTG | 6 cut(s) | 177, 580, 604, 678, 779, 1458 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1150 |
| VpaK11BI | GGWCC | 2 cut(s) | 21, 125 |
| VspI | ATTAAT | 1 cut(s) | 267 |
| XapI | RAATTY | 6 cut(s) | 563, 762, 1245, 1973, 1983, 2250 |
| XceI | RCATGY | 2 cut(s) | 1123, 1186 |
| XmiI | GTMKAC | 1 cut(s) | 1026 |
| XspI | CTAG | 9 cut(s) | 164, 452, 485, 1047, 1187, 1256, 1773, 1877, 2138 |
| ZrmI | AGTACT | 2 cut(s) | 725, 1525 |
| Zsp2I | ATGCAT | 1 cut(s) | 1184 |