Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002794

Physical Location & Seq

Genomic Coordinates Forward (+)

51743352 .. 51746481

Gene Structure 3130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1416100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGGATCATGCGGCTGATGCTCAGAGAACTGATCTAATGACCATCACTCGTTTTGTTCTTAACGAGCAGTCCAAGCATCCCGAGGCACGTGGCGATTTAACCATCTTACTCAACCACATTGTTCTCGGTTGCAAATTTGTCTGCTCCTCCGTTAGCAAGGCAGGTCTTGCAAAATTAATTGGACTTGCTGGAGAGACCAACGTTCAAGGTGAAGAGCAGAAGAAATTGGATGTGCTTTCAAATCAAGTTTTTGTGAAAGCGCTAACTAGCAGTGGCCGTACTTGCATTCTTGTTTCGGAAGAGGATGAAGAGGCCATATTCGTAGAGTCATCAAAGCGTGGAAGATACATTGTTGTTTTTGACCCGTTGGATGGATCCTCCAACATCGATTGTGGTGTTTCTATAGGAACTATCTTTGGGATTTATGTGGCGAAAGATAAGCAAAACCCAAGTCTTGAGGATGTACTGCGACCTGGGAATAAGATGGTAGCCGCTGGTTATTGCATGTATGGAAGCTCTTGCACGCTGGTGCTTAGTACTGGAAATGGAGTGAATGGCTTCACGCTTGATCCATCGCTAGGGGAATTTATATTAACTCATTCCAACATTAAGATTCCGCAGAAGGGAAAGATCTACTCAGTAAATGAAGGAAATGCACAGAACTGGGATGAGCAAACTACCAAGTATGTGGAAAAATGCAAGTTCCCCCAAGATGGTTCATCTCCCAAGTCTCTTAGATACATTGGAAGCATGGTTGCTGATGTGCACCGAACATTGCTATACGGAGGCATGTTTATGTACCCTGCCGATAAGAAAAGCCCAAATGGAAAACTACGAGTTCTTTACGAAGTTTTCCCGATGTCATACCTGGTTGAGCAAGCAGGAGGTCAAGCTTTTACTGGAAAGCAAAGGGCCCTAGACTTGGTTCCAAACAAGATACACGAGAGGTCCCCAGTATTCCTTGGTAGCTATGACGACGTCGAGGAAATTAAACAACTGTATGGGGTTAAGAATAGCATCTCCAATGGCTTTTCTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00051 ko00680 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko04152 ko04910 map00010 map00030 map00051 map00680 map00710 map01100 map01110 map01120 map01130 map01200 map04152 map04910

Pfam Domains

Protein Families

FBPase

Protein Analysis

347

Amino Acids

37.87

Weight (kDa)

6.33

Isoelectric Point (pI)

43.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FBPase	PF00316	13 - 200	1.9e-84	Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_C	PF18913	205 - 334	3.1e-52	Fructose-1-6-bisphosphatase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002794)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43670
fragaria_vesca	FvH4_2g13890 FvH4_2g13890 FvH4_2g13890 FvH4_2g13890 FvH4_2g13890 FvH4_2g13890
malus_domestica	MD05G1023900.v1.1 MD10G1024400.v1.1 MD15G1416100.v1.1
prunus_persica	Prupe.8G028300_v2.0.a1 Prupe.8G028300_v2.0.a1
pyrus_communis	pycom05g01530 pycom10g01620
rosa_chinensis	RchiOBHm_Chr6g0275641 RchiOBHm_Chr7g0225171 RchiOBHm_Chr7g0225291 RchiOBHm_Chr7g0225311
rosa_laevigata	RLG00000001840 RLG00000013451
rosa_multiflora	Rmu_sc0002011.1_g000002 Rmu_sc0005043.1_g000001 Rmu_sc0010532.1_g000007
rosa_roxburghii	Rroxscaffold_3G00234160 Rroxscaffold_7G00193110
rosa_rugosa	Rorug06G0094600 Rorug06G0094700 Rorug07G0227700 Rorug07G0227700
rosa_samantha	Rh6AG207100 Rh6BG209800 Rh6CG213000 Rh6DG202900 Rh7AG374800 Rh7BG362700 Rh7CG394500
rosa_wichuraiana	Rw0G021340 Rw6G017950 Rw7G031530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	981
Acc36I	ACCTGC	1 cut(s)	152
AciI	CCGC	3 cut(s)	11, 492, 617
AclI	AACGTT	1 cut(s)	201
AclWI	GGATC	4 cut(s)	12, 369, 382, 563
AcoI	YGGCCR	1 cut(s)	274
AcsI	RAATTY	2 cut(s)	134, 584
AcvI	CACGTG	1 cut(s)	89
AcyI	GRCGYC	1 cut(s)	978
AfaI	GTAC	4 cut(s)	280, 465, 538, 800
AfeI	AGCGCT	1 cut(s)	261
AfiI	CCNNNNNNNGG	5 cut(s)	371, 578, 623, 713, 922
AgsI	TTSAA	2 cut(s)	206, 240
AjnI	CCWGG	2 cut(s)	472, 867
AleI	CACNNNNGTG	1 cut(s)	527
AluBI	AGCT	3 cut(s)	516, 893, 969
AluI	AGCT	3 cut(s)	516, 893, 969
Alw21I	GWGCWC	1 cut(s)	768
Alw26I	GTCTC	2 cut(s)	188, 735
Alw44I	GTGCAC	1 cut(s)	764
AlwI	GGATC	4 cut(s)	12, 369, 382, 563
Ama87I	CYCGRG	1 cut(s)	80
Aor51HI	AGCGCT	1 cut(s)	261
AoxI	GGCC	3 cut(s)	274, 312, 912
ApaI	GGGCCC	1 cut(s)	916
ApaLI	GTGCAC	1 cut(s)	764
ApoI	RAATTY	2 cut(s)	134, 584
ArsI	GACNNNNNNTTYG	2 cut(s)	436, 468
AseI	ATTAAT	1 cut(s)	176
Asp700I	GAANNNNTTC	1 cut(s)	557
AspLEI	GCGC	1 cut(s)	262
AspS9I	GGNCC	3 cut(s)	912, 913, 948
AsuHPI	GGTGA	1 cut(s)	221
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	1 cut(s)	948
BaeGI	GKGCMC	2 cut(s)	768, 916
BamHI	GGATCC	1 cut(s)	374
BanII	GRGCYC	1 cut(s)	916
BauI	CACGAG	1 cut(s)	941
BbrPI	CACGTG	1 cut(s)	89
Bbv12I	GWGCWC	1 cut(s)	768
BccI	CCATC	6 cut(s)	50, 110, 365, 478, 580, 707
BceAI	ACGGC	1 cut(s)	261
BciT130I	CCWGG	2 cut(s)	474, 869
BcoDI	GTCTC	2 cut(s)	188, 735
BfaI	CTAG	4 cut(s)	267, 578, 917, 1035
BfmI	CTRYAG	1 cut(s)	402
BfoI	RGCGCY	1 cut(s)	263
BfuAI	ACCTGC	1 cut(s)	152
BglII	AGATCT	1 cut(s)	630
BisI	GCNGC	2 cut(s)	12, 492
BlsI	GCNGC	2 cut(s)	13, 493
BmcAI	AGTACT	1 cut(s)	538
Bme1390I	CCNGG	2 cut(s)	474, 869
Bme18I	GGWCC	1 cut(s)	948
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	3 cut(s)	912, 913, 948
BmiI	GGNNCC	4 cut(s)	376, 914, 927, 950
BmrFI	CCNGG	2 cut(s)	474, 869
BmrI	ACTGGG	2 cut(s)	673, 947
BmsI	GCATC	3 cut(s)	7, 85, 1026
BmuI	ACTGGG	2 cut(s)	673, 947
BpmI	CTGGAG	1 cut(s)	210
BpuEI	CTTGAG	1 cut(s)	476
Bsa29I	ATCGAT	1 cut(s)	387
BsaAI	YACGTR	1 cut(s)	89
BsaHI	GRCGYC	1 cut(s)	978
BsaI	GGTCTC	1 cut(s)	188
BsaJI	CCNNGG	3 cut(s)	81, 473, 961
Bsc4I	CCNNNNNNNGG	5 cut(s)	371, 578, 623, 713, 922
Bse1I	ACTGG	4 cut(s)	544, 668, 904, 953
Bse3DI	GCAATG	1 cut(s)	773
BseBI	CCWGG	2 cut(s)	474, 869
BseCI	ATCGAT	1 cut(s)	387
BseDI	CCNNGG	3 cut(s)	81, 473, 961
BseGI	GGATG	6 cut(s)	76, 235, 310, 376, 466, 673
BseLI	CCNNNNNNNGG	5 cut(s)	371, 578, 623, 713, 922
BseMI	GCAATG	1 cut(s)	773
BseMII	CTCAG	2 cut(s)	35, 651
BseNI	ACTGG	4 cut(s)	544, 668, 904, 953
BseRI	GAGGAG	1 cut(s)	136
BseSI	GKGCMC	2 cut(s)	768, 916
BshFI	GGCC	3 cut(s)	276, 314, 914
BshVI	ATCGAT	1 cut(s)	387
BsiHKAI	GWGCWC	1 cut(s)	768
BsiHKCI	CYCGRG	1 cut(s)	80
BslFI	GGGAC	1 cut(s)	934
BslI	CCNNNNNNNGG	5 cut(s)	371, 578, 623, 713, 922
BsmAI	GTCTC	2 cut(s)	188, 735
BsmFI	GGGAC	1 cut(s)	934
BsmI	GAATGC	1 cut(s)	285
BsnI	GGCC	3 cut(s)	276, 314, 914
Bso31I	GGTCTC	1 cut(s)	188
BsoBI	CYCGRG	1 cut(s)	80
Bsp120I	GGGCCC	1 cut(s)	912
Bsp1286I	GDGCHC	2 cut(s)	768, 916
Bsp143I	GATC	5 cut(s)	4, 31, 374, 568, 630
BspACI	CCGC	3 cut(s)	11, 492, 617
BspANI	GGCC	3 cut(s)	276, 314, 914
BspCNI	CTCAG	2 cut(s)	34, 650
BspDI	ATCGAT	1 cut(s)	387
BspLI	GGNNCC	4 cut(s)	376, 914, 927, 950
BspMI	ACCTGC	1 cut(s)	152
BspPI	GGATC	4 cut(s)	12, 369, 382, 563
BspQI	GCTCTTC	1 cut(s)	207
BspTNI	GGTCTC	1 cut(s)	188
BsrDI	GCAATG	1 cut(s)	773
BsrI	ACTGG	4 cut(s)	544, 668, 904, 953
BssECI	CCNNGG	3 cut(s)	81, 473, 961
BssMI	GATC	5 cut(s)	4, 31, 374, 568, 630
BssNI	GRCGYC	1 cut(s)	978
BssSI	CACGAG	1 cut(s)	941
BssT1I	CCWWGG	1 cut(s)	961
Bst2BI	CACGAG	1 cut(s)	941
Bst2UI	CCWGG	2 cut(s)	474, 869
Bst4CI	ACNGT	1 cut(s)	999
Bst6I	CTCTTC	3 cut(s)	207, 294, 303
BstACI	GRCGYC	1 cut(s)	978
BstAPI	GCANNNNNTGC	1 cut(s)	167
BstBAI	YACGTR	1 cut(s)	89
BstC8I	GCNNGC	2 cut(s)	524, 879
BstDEI	CTNAG	4 cut(s)	21, 533, 637, 734
BstF5I	GGATG	6 cut(s)	76, 235, 310, 376, 466, 673
BstH2I	RGCGCY	1 cut(s)	263
BstHHI	GCGC	1 cut(s)	262
BstKTI	GATC	5 cut(s)	7, 34, 377, 571, 633
BstMAI	GTCTC	2 cut(s)	188, 735
BstMBI	GATC	5 cut(s)	4, 31, 374, 568, 630
BstMWI	GCNNNNNNNGC	4 cut(s)	17, 73, 167, 282
BstNI	CCWGG	2 cut(s)	474, 869
BstNSI	RCATGY	2 cut(s)	508, 793
BstSCI	CCNGG	2 cut(s)	472, 867
BstSFI	CTRYAG	1 cut(s)	402
BstSLI	GKGCMC	2 cut(s)	768, 916
BstX2I	RGATCY	2 cut(s)	374, 630
BstXI	CCANNNNNNTGG	1 cut(s)	688
BstYI	RGATCY	2 cut(s)	374, 630
Bsu15I	ATCGAT	1 cut(s)	387
BsuRI	GGCC	3 cut(s)	276, 314, 914
BsuTUI	ATCGAT	1 cut(s)	387
BtgZI	GCGATG	1 cut(s)	558
BtsCI	GGATG	6 cut(s)	76, 235, 310, 376, 466, 673
BtsI	GCAGTG	1 cut(s)	277
BtsIMutI	CAGTG	1 cut(s)	277
BveI	ACCTGC	1 cut(s)	152
Cac8I	GCNNGC	2 cut(s)	524, 879
CfoI	GCGC	1 cut(s)	262
Cfr13I	GGNCC	3 cut(s)	912, 913, 948
ClaI	ATCGAT	1 cut(s)	387
CsiI	ACCWGGT	1 cut(s)	867
Csp6I	GTAC	4 cut(s)	279, 464, 537, 799
CviAII	CATG	4 cut(s)	8, 505, 751, 790
CviQI	GTAC	4 cut(s)	279, 464, 537, 799
DdeI	CTNAG	4 cut(s)	21, 533, 637, 734
DpnI	GATC	5 cut(s)	6, 33, 376, 570, 632
DpnII	GATC	5 cut(s)	4, 31, 374, 568, 630
EaeI	YGGCCR	1 cut(s)	274
Eam1104I	CTCTTC	3 cut(s)	207, 294, 303
EarI	CTCTTC	3 cut(s)	207, 294, 303
Eco130I	CCWWGG	1 cut(s)	961
Eco24I	GRGCYC	1 cut(s)	916
Eco31I	GGTCTC	1 cut(s)	188
Eco47I	GGWCC	1 cut(s)	948
Eco47III	AGCGCT	1 cut(s)	261
Eco72I	CACGTG	1 cut(s)	89
Eco88I	CYCGRG	1 cut(s)	80
EcoO109I	RGGNCCY	3 cut(s)	912, 913, 948
EcoRII	CCWGG	2 cut(s)	472, 867
EcoT14I	CCWWGG	1 cut(s)	961
EcoT38I	GRGCYC	1 cut(s)	916
ErhI	CCWWGG	1 cut(s)	961
FaeI	CATG	4 cut(s)	11, 508, 754, 793
FaqI	GGGAC	1 cut(s)	934
FatI	CATG	4 cut(s)	7, 504, 750, 789
Fnu4HI	GCNGC	2 cut(s)	12, 492
FokI	GGATG	6 cut(s)	63, 242, 317, 383, 473, 680
FriOI	GRGCYC	1 cut(s)	916
Fsp4HI	GCNGC	2 cut(s)	12, 492
FspBI	CTAG	4 cut(s)	267, 578, 917, 1035
GlaI	GCGC	1 cut(s)	261
GluI	GCNGC	2 cut(s)	12, 492
GsuI	CTGGAG	1 cut(s)	210
HaeII	RGCGCY	1 cut(s)	263
HaeIII	GGCC	3 cut(s)	276, 314, 914
HhaI	GCGC	1 cut(s)	262
Hin1I	GRCGYC	1 cut(s)	978
Hin1II	CATG	4 cut(s)	11, 508, 754, 793
Hin6I	GCGC	1 cut(s)	260
HinP1I	GCGC	1 cut(s)	260
HindIII	AAGCTT	1 cut(s)	891
HinfI	GANTC	2 cut(s)	326, 613
HphI	GGTGA	1 cut(s)	221
Hpy166II	GTNNAC	1 cut(s)	766
Hpy188I	TCNGA	2 cut(s)	24, 298
Hpy188III	TCNNGA	3 cut(s)	80, 455, 856
Hpy8I	GTNNAC	1 cut(s)	766
Hpy99I	CGWCG	2 cut(s)	980, 983
HpyAV	CCTTC	2 cut(s)	616, 641
HpyCH4III	ACNGT	1 cut(s)	999
HpyCH4IV	ACGT	3 cut(s)	88, 201, 978
HpyCH4V	TGCA	8 cut(s)	132, 170, 285, 504, 522, 656, 699, 766
HpyF10VI	GCNNNNNNNGC	4 cut(s)	17, 73, 167, 282
HpyF3I	CTNAG	4 cut(s)	21, 533, 637, 734
HpySE526I	ACGT	3 cut(s)	88, 201, 978
Hsp92I	GRCGYC	1 cut(s)	978
Hsp92II	CATG	4 cut(s)	11, 508, 754, 793
HspAI	GCGC	1 cut(s)	260
Kzo9I	GATC	5 cut(s)	4, 31, 374, 568, 630
LguI	GCTCTTC	1 cut(s)	207
LmnI	GCTCC	1 cut(s)	149
LweI	GCATC	3 cut(s)	7, 85, 1026
MabI	ACCWGGT	1 cut(s)	867
MaeI	CTAG	4 cut(s)	267, 578, 917, 1035
MaeII	ACGT	3 cut(s)	88, 201, 978
MalI	GATC	5 cut(s)	6, 33, 376, 570, 632
MboI	GATC	5 cut(s)	4, 31, 374, 568, 630
MboII	GAAGA	5 cut(s)	224, 232, 311, 320, 354
MflI	RGATCY	2 cut(s)	374, 630
MhlI	GDGCHC	2 cut(s)	768, 916
MluCI	AATT	6 cut(s)	134, 173, 177, 224, 584, 987
MlyI	GAGTC	1 cut(s)	335
MmeI	TCCRAC	3 cut(s)	348, 405, 627
MroXI	GAANNNNTTC	1 cut(s)	557
MseI	TTAA	7 cut(s)	60, 98, 176, 593, 609, 990, 1008
MslI	CAYNNNNRTG	2 cut(s)	527, 794
MspA1I	CMGCKG	1 cut(s)	494
MspR9I	CCNGG	2 cut(s)	474, 869
Mva1269I	GAATGC	1 cut(s)	285
MvaI	CCWGG	2 cut(s)	474, 869
MwoI	GCNNNNNNNGC	4 cut(s)	17, 73, 167, 282
NdeII	GATC	5 cut(s)	4, 31, 374, 568, 630
NlaIII	CATG	4 cut(s)	11, 508, 754, 793
NlaIV	GGNNCC	4 cut(s)	376, 914, 927, 950
NspI	RCATGY	2 cut(s)	508, 793
OliI	CACNNNNGTG	1 cut(s)	527
PciSI	GCTCTTC	1 cut(s)	207
PctI	GAATGC	1 cut(s)	285
PdmI	GAANNNNTTC	1 cut(s)	557
PfeI	GAWTC	1 cut(s)	613
PflFI	GACNNNGTC	1 cut(s)	977
PkrI	GCNGC	2 cut(s)	13, 493
PleI	GAGTC	1 cut(s)	334
PmaCI	CACGTG	1 cut(s)	89
PmlI	CACGTG	1 cut(s)	89
PpsI	GAGTC	1 cut(s)	334
Ppu21I	YACGTR	1 cut(s)	89
PpuMI	RGGWCCY	1 cut(s)	948
PshBI	ATTAAT	1 cut(s)	176
Psp1406I	AACGTT	1 cut(s)	201
Psp5II	RGGWCCY	1 cut(s)	948
Psp6I	CCWGG	2 cut(s)	472, 867
PspCI	CACGTG	1 cut(s)	89
PspGI	CCWGG	2 cut(s)	472, 867
PspN4I	GGNNCC	4 cut(s)	376, 914, 927, 950
PspOMI	GGGCCC	1 cut(s)	912
PspPI	GGNCC	3 cut(s)	912, 913, 948
PspPPI	RGGWCCY	1 cut(s)	948
PsuI	RGATCY	2 cut(s)	374, 630
PsyI	GACNNNGTC	1 cut(s)	977
RsaI	GTAC	4 cut(s)	280, 465, 538, 800
RsaNI	GTAC	4 cut(s)	279, 464, 537, 799
RseI	CAYNNNNRTG	2 cut(s)	527, 794
SapI	GCTCTTC	1 cut(s)	207
SaqAI	TTAA	7 cut(s)	60, 98, 176, 593, 609, 990, 1008
SatI	GCNGC	2 cut(s)	12, 492
Sau3AI	GATC	5 cut(s)	4, 31, 374, 568, 630
Sau96I	GGNCC	3 cut(s)	912, 913, 948
ScaI	AGTACT	1 cut(s)	538
SchI	GAGTC	1 cut(s)	335
ScrFI	CCNGG	2 cut(s)	474, 869
SduI	GDGCHC	2 cut(s)	768, 916
SexAI	ACCWGGT	1 cut(s)	867
SfaNI	GCATC	3 cut(s)	7, 85, 1026
SfcI	CTRYAG	1 cut(s)	402
SinI	GGWCC	1 cut(s)	948
SmiMI	CAYNNNNRTG	2 cut(s)	527, 794
SmlI	CTYRAG	1 cut(s)	455
SmoI	CTYRAG	1 cut(s)	455
Sse9I	AATT	6 cut(s)	134, 173, 177, 224, 584, 987
SsiI	CCGC	3 cut(s)	11, 492, 617
SspMI	CTAG	4 cut(s)	267, 578, 917, 1035
StyD4I	CCNGG	2 cut(s)	472, 867
StyI	CCWWGG	1 cut(s)	961
TaaI	ACNGT	1 cut(s)	999
TaiI	ACGT	3 cut(s)	91, 204, 981
TaqI	TCGA	2 cut(s)	387, 981
TasI	AATT	6 cut(s)	134, 173, 177, 224, 584, 987
TatI	WGTACW	2 cut(s)	463, 536
TauI	GCSGC	2 cut(s)	14, 494
TfiI	GAWTC	1 cut(s)	613
Tru1I	TTAA	7 cut(s)	60, 98, 176, 593, 609, 990, 1008
Tru9I	TTAA	7 cut(s)	60, 98, 176, 593, 609, 990, 1008
TscAI	CASTG	1 cut(s)	277
TspDTI	ATGAA	3 cut(s)	321, 660, 708
TspGWI	ACGGA	2 cut(s)	139, 798
TspRI	CASTG	1 cut(s)	277
Tth111I	GACNNNGTC	1 cut(s)	977
VneI	GTGCAC	1 cut(s)	764
VpaK11BI	GGWCC	1 cut(s)	948
VspI	ATTAAT	1 cut(s)	176
XapI	RAATTY	2 cut(s)	134, 584
XceI	RCATGY	2 cut(s)	508, 793
XmnI	GAANNNNTTC	1 cut(s)	557
XspI	CTAG	4 cut(s)	267, 578, 917, 1035
ZraI	GACGTC	1 cut(s)	979
ZrmI	AGTACT	1 cut(s)	538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.