Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002794

Physical Location & Seq

Genomic Coordinates Forward (+)

2566771 .. 2570494

Gene Structure 3724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G028300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1023 bp

ATGGATCACGCGGCCGATGCTCACCGTACGGATTTGATGACCATAACGAGGTTCGTGCTGAATGAGCAGTCCAAGCACCCTGAGTCTCGCGGAGACTTCACCATCTTGCTCAATCATATTGTTCTTGGCTGCAAGTTTGTCTGCTCTGCTGTCAACAAGGCGGGTCTGGCCAAACTTATTGGGCTTGCTGGAGAGACCAACGTTCAGGGTGAAGAGCAAAAGAAACTGGATGTGCTTTCAAATGAAGTTTTTGTTAAGGCCCTGGTTAGCAGTGGCAGAACTTCTATCCTTGTTTCGGAGGAAGATGAAGAGGCCATATTTGTGGAGCCATCCAAGCGTGGAAAGTACTGTGTTGTATTTGATCCACTGGATGGTTCGTCTAACATTGATTGTGGTGTTTCCATTGGAACGATTTTTGGGATTTATGTGGTAAAAGATGGCATTGAACCTACTCTGCACGATGTCTTGCAACCTGGAAAGAATATGGTTGCAGCAGGCTACTGCATGTATGGAAGCTCTTGCACGTTTGTATTGAGCACTGGAACAGGGGTTCATGGGTTCACTCTGGATCCATCTCTTGGGGAGTTCATACTAACTCACCCAGACATCCAGATTCCAAAGAAAGGAAAAATCTATTCAGTGAATGAAGGGAATGCCAAAAATTGGGATGGTCCGACGGCCAAGTATGTGGAAAAGTGCAAATACCCGAAAGATGGTTCATCACCAAAGTCTCTAAGATACATTGGAAGCATGGTTGCTGATGTTCATCGGACACTGCTTTATGGAGGTATCTTTTTGTATCCTGCTGACAAGAAGAGCCCAAATGGGAAACTGCGTGTTCTCTACGAAGTCTTCCCCATGTCTTTCTTGATGGAACAAGCAGGCGGTCAGTCATTCACTGGCAAGGAACGGGCCCTTGACCTAGTTCCAAACAAGATCCACGAGCGCTCTCCAATCTTCCTTGGCAGCTATGATGATGTTGAGGAAATCAAGACGCTCTACGCCGCAGAAGGGAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0005984 GO:0005985 GO:0005986 GO:0005996 GO:0006000 GO:0006002 GO:0006006 GO:0006073 GO:0006094 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009251 GO:0009311 GO:0009312 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009750 GO:0009987 GO:0010033 GO:0015979 GO:0016051 GO:0016052 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0019318 GO:0019319 GO:0019637 GO:0030388 GO:0033993 GO:0034284 GO:0034637 GO:0042132 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0046364 GO:0050308 GO:0050896 GO:0071704 GO:0097305 GO:1901135 GO:1901575 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00051 ko00680 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko04152 ko04910 map00010 map00030 map00051 map00680 map00710 map01100 map01110 map01120 map01130 map01200 map04152 map04910

Pfam Domains

Protein Families

FBPase

Protein Analysis

341

Amino Acids

37.17

Weight (kDa)

6.16

Isoelectric Point (pI)

39.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002794)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43670
fragaria_vesca	FvH4_2g13890 FvH4_2g13890 FvH4_2g13890 FvH4_2g13890 FvH4_2g13890 FvH4_2g13890
malus_domestica	MD05G1023900.v1.1 MD10G1024400.v1.1 MD15G1416100.v1.1
prunus_persica	Prupe.8G028300_v2.0.a1 Prupe.8G028300_v2.0.a1
pyrus_communis	pycom05g01530 pycom10g01620
rosa_chinensis	RchiOBHm_Chr6g0275641 RchiOBHm_Chr7g0225171 RchiOBHm_Chr7g0225291 RchiOBHm_Chr7g0225311
rosa_laevigata	RLG00000001840 RLG00000013451
rosa_multiflora	Rmu_sc0002011.1_g000002 Rmu_sc0005043.1_g000001 Rmu_sc0010532.1_g000007
rosa_roxburghii	Rroxscaffold_3G00234160 Rroxscaffold_7G00193110
rosa_rugosa	Rorug06G0094600 Rorug06G0094700 Rorug07G0227700 Rorug07G0227700
rosa_samantha	Rh6AG207100 Rh6BG209800 Rh6CG213000 Rh6DG202900 Rh7AG374800 Rh7BG362700 Rh7CG394500
rosa_wichuraiana	Rw0G021340 Rw6G017950 Rw7G031530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	371, 578, 663
AccII	CGCG	2 cut(s)	11, 90
AciI	CCGC	5 cut(s)	11, 90, 161, 885, 1005
AclI	AACGTT	1 cut(s)	201
AclWI	GGATC	5 cut(s)	12, 356, 563, 576, 931
AcoI	YGGCCR	3 cut(s)	12, 168, 678
AfaI	GTAC	2 cut(s)	28, 347
AfeI	AGCGCT	1 cut(s)	947
AfiI	CCNNNNNNNGG	8 cut(s)	48, 295, 371, 578, 623, 663, 713, 1011
AgsI	TTSAA	2 cut(s)	240, 446
AjnI	CCWGG	2 cut(s)	261, 472
AloI	GAACNNNNNNTCC	2 cut(s)	534, 566
AluBI	AGCT	2 cut(s)	516, 969
AluI	AGCT	2 cut(s)	516, 969
Alw21I	GWGCWC	1 cut(s)	539
Alw26I	GTCTC	4 cut(s)	87, 90, 188, 735
AlwI	GGATC	5 cut(s)	12, 356, 563, 576, 931
Aor51HI	AGCGCT	1 cut(s)	947
AoxI	GGCC	6 cut(s)	12, 168, 258, 312, 678, 912
ApaI	GGGCCC	1 cut(s)	916
ApeKI	GCWGC	3 cut(s)	129, 491, 966
AspLEI	GCGC	1 cut(s)	948
AspS9I	GGNCC	4 cut(s)	259, 671, 912, 913
AsuHPI	GGTGA	5 cut(s)	14, 91, 221, 590, 714
AvaII	GGWCC	1 cut(s)	671
BaeGI	GKGCMC	1 cut(s)	916
BalI	TGGCCA	1 cut(s)	170
BamHI	GGATCC	1 cut(s)	568
BanII	GRGCYC	2 cut(s)	821, 916
BauI	CACGAG	1 cut(s)	941
BbsI	GAAGAC	1 cut(s)	844
Bbv12I	GWGCWC	1 cut(s)	539
BbvI	GCAGC	3 cut(s)	116, 503, 978
BccI	CCATC	8 cut(s)	110, 337, 365, 431, 580, 662, 707, 865
BceAI	ACGGC	1 cut(s)	693
BcgI	CGANNNNNNTGC	2 cut(s)	37, 71
BciT130I	CCWGG	2 cut(s)	263, 474
BciVI	GTATCC	1 cut(s)	810
BcoDI	GTCTC	4 cut(s)	87, 90, 188, 735
BfaI	CTAG	1 cut(s)	923
BfoI	RGCGCY	1 cut(s)	949
BfuI	GTATCC	1 cut(s)	810
BisI	GCNGC	5 cut(s)	12, 130, 492, 967, 1005
BlsI	GCNGC	5 cut(s)	13, 131, 493, 968, 1006
BmcAI	AGTACT	1 cut(s)	347
Bme1390I	CCNGG	2 cut(s)	263, 474
Bme18I	GGWCC	1 cut(s)	671
BmgT120I	GGNCC	4 cut(s)	259, 671, 912, 913
BmiI	GGNNCC	3 cut(s)	327, 570, 914
BmrFI	CCNGG	2 cut(s)	263, 474
BmsI	GCATC	1 cut(s)	7
BpiI	GAAGAC	1 cut(s)	844
BpmI	CTGGAG	1 cut(s)	210
BsaBI	GATNNNNATC	1 cut(s)	765
BsaI	GGTCTC	1 cut(s)	188
BsaJI	CCNNGG	2 cut(s)	261, 961
Bsc4I	CCNNNNNNNGG	8 cut(s)	48, 295, 371, 578, 623, 663, 713, 1011
Bse1I	ACTGG	4 cut(s)	231, 372, 544, 904
Bse8I	GATNNNNATC	1 cut(s)	765
BseBI	CCWGG	2 cut(s)	263, 474
BseDI	CCNNGG	2 cut(s)	261, 961
BseGI	GGATG	5 cut(s)	235, 329, 376, 606, 673
BseJI	GATNNNNATC	1 cut(s)	765
BseLI	CCNNNNNNNGG	8 cut(s)	48, 295, 371, 578, 623, 663, 713, 1011
BseMII	CTCAG	1 cut(s)	72
BseNI	ACTGG	4 cut(s)	231, 372, 544, 904
BseSI	GKGCMC	1 cut(s)	916
BseX3I	CGGCCG	1 cut(s)	12
BseXI	GCAGC	3 cut(s)	116, 503, 978
BsgI	GTGCAG	1 cut(s)	440
Bsh1236I	CGCG	2 cut(s)	11, 90
Bsh1285I	CGRYCG	1 cut(s)	15
BshFI	GGCC	6 cut(s)	14, 170, 260, 314, 680, 914
BsiEI	CGRYCG	1 cut(s)	15
BsiHKAI	GWGCWC	1 cut(s)	539
BsiWI	CGTACG	1 cut(s)	26
BslI	CCNNNNNNNGG	8 cut(s)	48, 295, 371, 578, 623, 663, 713, 1011
BsmAI	GTCTC	4 cut(s)	87, 90, 188, 735
BsmI	GAATGC	1 cut(s)	658
BsnI	GGCC	6 cut(s)	14, 170, 260, 314, 680, 914
Bso31I	GGTCTC	1 cut(s)	188
Bsp120I	GGGCCC	1 cut(s)	912
Bsp1286I	GDGCHC	3 cut(s)	539, 821, 916
Bsp143I	GATC	4 cut(s)	4, 361, 568, 936
BspACI	CCGC	5 cut(s)	11, 90, 161, 885, 1005
BspANI	GGCC	6 cut(s)	14, 170, 260, 314, 680, 914
BspCNI	CTCAG	1 cut(s)	73
BspFNI	CGCG	2 cut(s)	11, 90
BspLI	GGNNCC	3 cut(s)	327, 570, 914
BspPI	GGATC	5 cut(s)	12, 356, 563, 576, 931
BspQI	GCTCTTC	2 cut(s)	207, 809
BspTNI	GGTCTC	1 cut(s)	188
BsrI	ACTGG	4 cut(s)	231, 372, 544, 904
BssECI	CCNNGG	2 cut(s)	261, 961
BssMI	GATC	4 cut(s)	4, 361, 568, 936
BssSI	CACGAG	1 cut(s)	941
BssT1I	CCWWGG	1 cut(s)	961
Bst2BI	CACGAG	1 cut(s)	941
Bst2UI	CCWGG	2 cut(s)	263, 474
Bst4CI	ACNGT	2 cut(s)	26, 350
Bst6I	CTCTTC	3 cut(s)	207, 303, 809
BstC8I	GCNNGC	3 cut(s)	186, 496, 883
BstDEI	CTNAG	2 cut(s)	81, 734
BstF5I	GGATG	5 cut(s)	235, 329, 376, 606, 673
BstFNI	CGCG	2 cut(s)	11, 90
BstH2I	RGCGCY	1 cut(s)	949
BstHHI	GCGC	1 cut(s)	948
BstKTI	GATC	4 cut(s)	7, 364, 571, 939
BstMAI	GTCTC	4 cut(s)	87, 90, 188, 735
BstMBI	GATC	4 cut(s)	4, 361, 568, 936
BstMCI	CGRYCG	1 cut(s)	15
BstMWI	GCNNNNNNNGC	5 cut(s)	17, 64, 73, 167, 334
BstNI	CCWGG	2 cut(s)	263, 474
BstNSI	RCATGY	1 cut(s)	508
BstSCI	CCNGG	2 cut(s)	261, 472
BstSLI	GKGCMC	1 cut(s)	916
BstUI	CGCG	2 cut(s)	11, 90
BstV1I	GCAGC	3 cut(s)	116, 503, 978
BstV2I	GAAGAC	1 cut(s)	844
BstX2I	RGATCY	2 cut(s)	568, 936
BstXI	CCANNNNNNTGG	2 cut(s)	322, 688
BstYI	RGATCY	2 cut(s)	568, 936
BstZI	CGGCCG	1 cut(s)	12
BsuI	GTATCC	1 cut(s)	810
BsuRI	GGCC	6 cut(s)	14, 170, 260, 314, 680, 914
BtsCI	GGATG	5 cut(s)	235, 329, 376, 606, 673
BtsI	GCAGTG	2 cut(s)	277, 773
BtsIMutI	CAGTG	6 cut(s)	277, 365, 537, 645, 773, 897
Cac8I	GCNNGC	3 cut(s)	186, 496, 883
CfoI	GCGC	1 cut(s)	948
Cfr13I	GGNCC	4 cut(s)	259, 671, 912, 913
CseI	GACGC	1 cut(s)	1003
Csp6I	GTAC	2 cut(s)	27, 346
CviAII	CATG	4 cut(s)	505, 554, 751, 859
CviQI	GTAC	2 cut(s)	27, 346
DdeI	CTNAG	2 cut(s)	81, 734
DpnI	GATC	4 cut(s)	6, 363, 570, 938
DpnII	GATC	4 cut(s)	4, 361, 568, 936
EaeI	YGGCCR	3 cut(s)	12, 168, 678
EagI	CGGCCG	1 cut(s)	12
Eam1104I	CTCTTC	3 cut(s)	207, 303, 809
EarI	CTCTTC	3 cut(s)	207, 303, 809
EclXI	CGGCCG	1 cut(s)	12
Eco130I	CCWWGG	1 cut(s)	961
Eco24I	GRGCYC	2 cut(s)	821, 916
Eco31I	GGTCTC	1 cut(s)	188
Eco47I	GGWCC	1 cut(s)	671
Eco47III	AGCGCT	1 cut(s)	947
Eco52I	CGGCCG	1 cut(s)	12
EcoO109I	RGGNCCY	2 cut(s)	259, 913
EcoRII	CCWGG	2 cut(s)	261, 472
EcoT14I	CCWWGG	1 cut(s)	961
EcoT38I	GRGCYC	2 cut(s)	821, 916
ErhI	CCWWGG	1 cut(s)	961
FaeI	CATG	4 cut(s)	508, 557, 754, 862
FatI	CATG	4 cut(s)	504, 553, 750, 858
FauI	CCCGC	1 cut(s)	154
Fnu4HI	GCNGC	5 cut(s)	12, 130, 492, 967, 1005
FokI	GGATG	5 cut(s)	242, 316, 383, 593, 680
FriOI	GRGCYC	2 cut(s)	821, 916
Fsp4HI	GCNGC	5 cut(s)	12, 130, 492, 967, 1005
FspBI	CTAG	1 cut(s)	923
GlaI	GCGC	1 cut(s)	947
GluI	GCNGC	5 cut(s)	12, 130, 492, 967, 1005
GsuI	CTGGAG	1 cut(s)	210
HaeII	RGCGCY	1 cut(s)	949
HaeIII	GGCC	6 cut(s)	14, 170, 260, 314, 680, 914
HgaI	GACGC	1 cut(s)	1003
HhaI	GCGC	1 cut(s)	948
Hin1II	CATG	4 cut(s)	508, 557, 754, 862
Hin6I	GCGC	1 cut(s)	946
HinP1I	GCGC	1 cut(s)	946
HincII	GTYRAC	1 cut(s)	154
HindII	GTYRAC	1 cut(s)	154
HinfI	GANTC	2 cut(s)	83, 613
HphI	GGTGA	5 cut(s)	14, 91, 221, 590, 714
Hpy166II	GTNNAC	2 cut(s)	154, 561
Hpy188I	TCNGA	3 cut(s)	298, 675, 771
Hpy188III	TCNNGA	4 cut(s)	566, 610, 868, 991
Hpy8I	GTNNAC	2 cut(s)	154, 561
Hpy99I	CGWCG	1 cut(s)	679
HpyAV	CCTTC	2 cut(s)	641, 1004
HpyCH4III	ACNGT	2 cut(s)	26, 350
HpyCH4IV	ACGT	2 cut(s)	201, 524
HpyCH4V	TGCA	7 cut(s)	132, 457, 469, 491, 504, 522, 699
HpyF10VI	GCNNNNNNNGC	5 cut(s)	17, 64, 73, 167, 334
HpyF3I	CTNAG	2 cut(s)	81, 734
HpySE526I	ACGT	2 cut(s)	201, 524
Hsp92II	CATG	4 cut(s)	508, 557, 754, 862
HspAI	GCGC	1 cut(s)	946
Kzo9I	GATC	4 cut(s)	4, 361, 568, 936
LguI	GCTCTTC	2 cut(s)	207, 809
LmnI	GCTCC	1 cut(s)	325
Lsp1109I	GCAGC	3 cut(s)	116, 503, 978
LweI	GCATC	1 cut(s)	7
MaeI	CTAG	1 cut(s)	923
MaeII	ACGT	2 cut(s)	201, 524
MalI	GATC	4 cut(s)	6, 363, 570, 938
MboI	GATC	4 cut(s)	4, 361, 568, 936
MboII	GAAGA	6 cut(s)	224, 314, 320, 826, 844, 949
MflI	RGATCY	2 cut(s)	568, 936
MhlI	GDGCHC	3 cut(s)	539, 821, 916
MlsI	TGGCCA	1 cut(s)	170
MluCI	AATT	1 cut(s)	661
MluNI	TGGCCA	1 cut(s)	170
MlyI	GAGTC	1 cut(s)	92
MmeI	TCCRAC	1 cut(s)	698
MnlI	CCTC	5 cut(s)	42, 292, 304, 779, 976
Mox20I	TGGCCA	1 cut(s)	170
MscI	TGGCCA	1 cut(s)	170
MseI	TTAA	1 cut(s)	255
MslI	CAYNNNNRTG	1 cut(s)	320
Msp20I	TGGCCA	1 cut(s)	170
MspR9I	CCNGG	2 cut(s)	263, 474
Mva1269I	GAATGC	1 cut(s)	658
MvaI	CCWGG	2 cut(s)	263, 474
MvnI	CGCG	2 cut(s)	11, 90
MwoI	GCNNNNNNNGC	5 cut(s)	17, 64, 73, 167, 334
NdeII	GATC	4 cut(s)	4, 361, 568, 936
NlaIII	CATG	4 cut(s)	508, 557, 754, 862
NlaIV	GGNNCC	3 cut(s)	327, 570, 914
NspI	RCATGY	1 cut(s)	508
PciSI	GCTCTTC	2 cut(s)	207, 809
PctI	GAATGC	1 cut(s)	658
PfeI	GAWTC	1 cut(s)	613
Pfl23II	CGTACG	1 cut(s)	26
PflMI	CCANNNNNTGG	3 cut(s)	371, 578, 663
PkrI	GCNGC	5 cut(s)	13, 131, 493, 968, 1006
PleI	GAGTC	1 cut(s)	91
PpsI	GAGTC	1 cut(s)	91
Psp1406I	AACGTT	1 cut(s)	201
Psp6I	CCWGG	2 cut(s)	261, 472
PspGI	CCWGG	2 cut(s)	261, 472
PspLI	CGTACG	1 cut(s)	26
PspN4I	GGNNCC	3 cut(s)	327, 570, 914
PspOMI	GGGCCC	1 cut(s)	912
PspPI	GGNCC	4 cut(s)	259, 671, 912, 913
PsuI	RGATCY	2 cut(s)	568, 936
RsaI	GTAC	2 cut(s)	28, 347
RsaNI	GTAC	2 cut(s)	27, 346
RseI	CAYNNNNRTG	1 cut(s)	320
SapI	GCTCTTC	2 cut(s)	207, 809
SaqAI	TTAA	1 cut(s)	255
SatI	GCNGC	5 cut(s)	12, 130, 492, 967, 1005
Sau3AI	GATC	4 cut(s)	4, 361, 568, 936
Sau96I	GGNCC	4 cut(s)	259, 671, 912, 913
ScaI	AGTACT	1 cut(s)	347
SchI	GAGTC	1 cut(s)	92
ScrFI	CCNGG	2 cut(s)	263, 474
SduI	GDGCHC	3 cut(s)	539, 821, 916
SetI	ASST	9 cut(s)	53, 204, 451, 475, 518, 527, 790, 924, 971
SfaNI	GCATC	1 cut(s)	7
SinI	GGWCC	1 cut(s)	671
SmiMI	CAYNNNNRTG	1 cut(s)	320
Sse9I	AATT	1 cut(s)	661
SsiI	CCGC	5 cut(s)	11, 90, 161, 885, 1005
SspMI	CTAG	1 cut(s)	923
StyD4I	CCNGG	2 cut(s)	261, 472
StyI	CCWWGG	1 cut(s)	961
TaaI	ACNGT	2 cut(s)	26, 350
TaiI	ACGT	2 cut(s)	204, 527
TasI	AATT	1 cut(s)	661
TatI	WGTACW	1 cut(s)	345
TauI	GCSGC	2 cut(s)	14, 1007
TfiI	GAWTC	1 cut(s)	613
Tru1I	TTAA	1 cut(s)	255
Tru9I	TTAA	1 cut(s)	255
TscAI	CASTG	6 cut(s)	277, 372, 544, 645, 780, 904
TseI	GCWGC	3 cut(s)	129, 491, 966
TspDTI	ATGAA	7 cut(s)	258, 321, 542, 577, 660, 708, 755
TspGWI	ACGGA	1 cut(s)	44
TspRI	CASTG	6 cut(s)	277, 372, 544, 645, 780, 904
Van91I	CCANNNNNTGG	3 cut(s)	371, 578, 663
VpaK11BI	GGWCC	1 cut(s)	671
XceI	RCATGY	1 cut(s)	508
XspI	CTAG	1 cut(s)	923
ZrmI	AGTACT	1 cut(s)	347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.