Something about silencing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43650 |
| fragaria_vesca | FvH4_5g27692 FvH4_5g27692 FvH4_5g27692 |
| malus_domestica | MD04G1048900.v1.1 MD17G1177700.v1.1 |
| prunus_persica | Prupe.1G206800_v2.0.a1 |
| pyrus_communis | pycom04g04300 |
| rosa_chinensis | RchiOBHm_Chr7g0219421 |
| rosa_laevigata | RLG00000002290 |
| rosa_multiflora | Rmu_sc0002460.1_g000021 Rmu_sc0003767.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00240050 |
| rosa_rugosa | Rorug07G0184900 |
| rosa_samantha | Rh7AG327800 Rh7BG317800 Rh7CG345200 Rh7DG323200 |
| rosa_wichuraiana | Rw7G027650 Rw7G027690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1268 |
| AciI | CCGC | 1 cut(s) | 1450 |
| AcsI | RAATTY | 3 cut(s) | 398, 921, 1124 |
| AcuI | CTGAAG | 5 cut(s) | 372, 831, 1112, 1198, 1277 |
| AcyI | GRCGYC | 1 cut(s) | 1326 |
| AfaI | GTAC | 5 cut(s) | 496, 541, 840, 1149, 1784 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 104, 275, 692, 1268, 1862 |
| AflII | CTTAAG | 1 cut(s) | 202 |
| AjnI | CCWGG | 1 cut(s) | 1244 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 807, 839 |
| Alw21I | GWGCWC | 2 cut(s) | 1750, 1904 |
| Alw26I | GTCTC | 1 cut(s) | 1500 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1484 |
| AoxI | GGCC | 1 cut(s) | 1869 |
| ApeKI | GCWGC | 7 cut(s) | 190, 379, 754, 1178, 1373, 1616, 1628 |
| ApoI | RAATTY | 3 cut(s) | 398, 921, 1124 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 807, 839 |
| AspLEI | GCGC | 1 cut(s) | 738 |
| AspS9I | GGNCC | 2 cut(s) | 1653, 1853 |
| AsuHPI | GGTGA | 4 cut(s) | 385, 568, 1421, 1849 |
| AvaII | GGWCC | 2 cut(s) | 1653, 1853 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 958, 990, 1131, 1163 |
| BauI | CACGAG | 1 cut(s) | 1743 |
| BbsI | GAAGAC | 2 cut(s) | 90, 1204 |
| Bbv12I | GWGCWC | 2 cut(s) | 1750, 1904 |
| BbvCI | CCTCAGC | 1 cut(s) | 222 |
| BbvI | GCAGC | 7 cut(s) | 202, 366, 766, 1165, 1360, 1603, 1615 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 33 |
| BciT130I | CCWGG | 1 cut(s) | 1246 |
| BciVI | GTATCC | 1 cut(s) | 154 |
| BclI | TGATCA | 1 cut(s) | 1761 |
| BcoDI | GTCTC | 1 cut(s) | 1500 |
| BfmI | CTRYAG | 1 cut(s) | 380 |
| BfrI | CTTAAG | 1 cut(s) | 202 |
| BfuI | GTATCC | 1 cut(s) | 154 |
| BisI | GCNGC | 7 cut(s) | 191, 380, 755, 1179, 1374, 1617, 1629 |
| BlsI | GCNGC | 7 cut(s) | 192, 381, 756, 1180, 1375, 1618, 1630 |
| BmcAI | AGTACT | 1 cut(s) | 840 |
| Bme1390I | CCNGG | 1 cut(s) | 1246 |
| Bme18I | GGWCC | 2 cut(s) | 1653, 1853 |
| BmgT120I | GGNCC | 2 cut(s) | 1653, 1853 |
| BmiI | GGNNCC | 2 cut(s) | 1086, 1665 |
| BmrFI | CCNGG | 1 cut(s) | 1246 |
| BmsI | GCATC | 4 cut(s) | 7, 643, 723, 995 |
| BpiI | GAAGAC | 2 cut(s) | 90, 1204 |
| BpmI | CTGGAG | 2 cut(s) | 1530, 1590 |
| Bpu10I | CCTNAGC | 2 cut(s) | 222, 1068 |
| BpuEI | CTTGAG | 2 cut(s) | 788, 1205 |
| BsaBI | GATNNNNATC | 1 cut(s) | 897 |
| BsaHI | GRCGYC | 1 cut(s) | 1326 |
| BsaJI | CCNNGG | 3 cut(s) | 1244, 1330, 1424 |
| BsaWI | WCCGGW | 1 cut(s) | 1874 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 704, 734 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 104, 275, 692, 1268, 1862 |
| Bse118I | RCCGGY | 1 cut(s) | 164 |
| Bse1I | ACTGG | 3 cut(s) | 821, 836, 1573 |
| Bse3DI | GCAATG | 1 cut(s) | 1062 |
| Bse8I | GATNNNNATC | 1 cut(s) | 897 |
| BseBI | CCWGG | 1 cut(s) | 1246 |
| BseDI | CCNNGG | 3 cut(s) | 1244, 1330, 1424 |
| BseGI | GGATG | 9 cut(s) | 10, 73, 232, 418, 604, 738, 832, 1507, 1540 |
| BseJI | GATNNNNATC | 1 cut(s) | 897 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 104, 275, 692, 1268, 1862 |
| BseMI | GCAATG | 1 cut(s) | 1062 |
| BseMII | CTCAG | 4 cut(s) | 213, 1419, 1511, 1629 |
| BseNI | ACTGG | 3 cut(s) | 821, 836, 1573 |
| BseRI | GAGGAG | 2 cut(s) | 566, 602 |
| BseXI | GCAGC | 7 cut(s) | 202, 366, 766, 1165, 1360, 1603, 1615 |
| BseYI | CCCAGC | 1 cut(s) | 1017 |
| BshFI | GGCC | 1 cut(s) | 1871 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1750, 1904 |
| BsiSI | CCGG | 2 cut(s) | 165, 1875 |
| BslFI | GGGAC | 1 cut(s) | 1749 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 104, 275, 692, 1268, 1862 |
| BsmAI | GTCTC | 1 cut(s) | 1500 |
| BsmFI | GGGAC | 1 cut(s) | 1749 |
| BsnI | GGCC | 1 cut(s) | 1871 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1750, 1904 |
| Bsp1407I | TGTACA | 1 cut(s) | 1147 |
| Bsp143I | GATC | 2 cut(s) | 858, 1761 |
| Bsp19I | CCATGG | 1 cut(s) | 1330 |
| BspACI | CCGC | 1 cut(s) | 1450 |
| BspANI | GGCC | 1 cut(s) | 1871 |
| BspCNI | CTCAG | 4 cut(s) | 214, 1418, 1510, 1630 |
| BspHI | TCATGA | 1 cut(s) | 121 |
| BspLI | GGNNCC | 2 cut(s) | 1086, 1665 |
| BspMAI | CTGCAG | 1 cut(s) | 384 |
| BspQI | GCTCTTC | 1 cut(s) | 657 |
| BspTI | CTTAAG | 1 cut(s) | 202 |
| BsrDI | GCAATG | 1 cut(s) | 1062 |
| BsrFI | RCCGGY | 1 cut(s) | 164 |
| BsrGI | TGTACA | 1 cut(s) | 1147 |
| BsrI | ACTGG | 3 cut(s) | 821, 836, 1573 |
| BssAI | RCCGGY | 1 cut(s) | 164 |
| BssECI | CCNNGG | 3 cut(s) | 1244, 1330, 1424 |
| BssMI | GATC | 2 cut(s) | 858, 1761 |
| BssNI | GRCGYC | 1 cut(s) | 1326 |
| BssSI | CACGAG | 1 cut(s) | 1743 |
| BssT1I | CCWWGG | 1 cut(s) | 1330 |
| Bst2BI | CACGAG | 1 cut(s) | 1743 |
| Bst2UI | CCWGG | 1 cut(s) | 1246 |
| Bst4CI | ACNGT | 4 cut(s) | 494, 1051, 1309, 1690 |
| Bst6I | CTCTTC | 5 cut(s) | 57, 348, 657, 942, 1805 |
| BstACI | GRCGYC | 1 cut(s) | 1326 |
| BstAFI | CTTAAG | 1 cut(s) | 202 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1625 |
| BstAUI | TGTACA | 1 cut(s) | 1147 |
| BstC8I | GCNNGC | 2 cut(s) | 847, 1476 |
| BstDEI | CTNAG | 5 cut(s) | 222, 1068, 1405, 1497, 1638 |
| BstDSI | CCRYGG | 1 cut(s) | 1330 |
| BstF5I | GGATG | 9 cut(s) | 10, 73, 232, 418, 604, 738, 832, 1507, 1540 |
| BstHHI | GCGC | 1 cut(s) | 738 |
| BstKTI | GATC | 2 cut(s) | 861, 1764 |
| BstMAI | GTCTC | 1 cut(s) | 1500 |
| BstMBI | GATC | 2 cut(s) | 858, 1761 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 763, 1471, 1625, 1634 |
| BstNI | CCWGG | 1 cut(s) | 1246 |
| BstSCI | CCNGG | 1 cut(s) | 1244 |
| BstSFI | CTRYAG | 1 cut(s) | 380 |
| BstV1I | GCAGC | 7 cut(s) | 202, 366, 766, 1165, 1360, 1603, 1615 |
| BstV2I | GAAGAC | 2 cut(s) | 90, 1204 |
| BsuI | GTATCC | 1 cut(s) | 154 |
| BsuRI | GGCC | 1 cut(s) | 1871 |
| BtgI | CCRYGG | 1 cut(s) | 1330 |
| BtgZI | GCGATG | 1 cut(s) | 1207 |
| BtsCI | GGATG | 9 cut(s) | 10, 73, 232, 418, 604, 738, 832, 1507, 1540 |
| BtsI | GCAGTG | 1 cut(s) | 1812 |
| BtsIMutI | CAGTG | 2 cut(s) | 1305, 1812 |
| Cac8I | GCNNGC | 2 cut(s) | 847, 1476 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1484 |
| CciI | TCATGA | 1 cut(s) | 121 |
| CfoI | GCGC | 1 cut(s) | 738 |
| Cfr10I | RCCGGY | 1 cut(s) | 164 |
| Cfr13I | GGNCC | 2 cut(s) | 1653, 1853 |
| CseI | GACGC | 3 cut(s) | 992, 1315, 1514 |
| Csp6I | GTAC | 5 cut(s) | 495, 540, 839, 1148, 1783 |
| CviAII | CATG | 8 cut(s) | 122, 236, 659, 718, 1058, 1156, 1331, 1460 |
| CviQI | GTAC | 5 cut(s) | 495, 540, 839, 1148, 1783 |
| DdeI | CTNAG | 5 cut(s) | 222, 1068, 1405, 1497, 1638 |
| DpnI | GATC | 2 cut(s) | 860, 1763 |
| DpnII | GATC | 2 cut(s) | 858, 1761 |
| DraI | TTTAAA | 1 cut(s) | 927 |
| Eam1104I | CTCTTC | 5 cut(s) | 57, 348, 657, 942, 1805 |
| EarI | CTCTTC | 5 cut(s) | 57, 348, 657, 942, 1805 |
| EciI | GGCGGA | 1 cut(s) | 1465 |
| Eco130I | CCWWGG | 1 cut(s) | 1330 |
| Eco47I | GGWCC | 2 cut(s) | 1653, 1853 |
| Eco57I | CTGAAG | 5 cut(s) | 372, 831, 1112, 1198, 1277 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1653 |
| EcoRII | CCWGG | 1 cut(s) | 1244 |
| EcoT14I | CCWWGG | 1 cut(s) | 1330 |
| ErhI | CCWWGG | 1 cut(s) | 1330 |
| FaeI | CATG | 8 cut(s) | 125, 239, 662, 721, 1061, 1159, 1334, 1463 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1196, 1228 |
| FaqI | GGGAC | 1 cut(s) | 1749 |
| FatI | CATG | 8 cut(s) | 121, 235, 658, 717, 1057, 1155, 1330, 1459 |
| FauNDI | CATATG | 1 cut(s) | 1285 |
| FbaI | TGATCA | 1 cut(s) | 1761 |
| Fnu4HI | GCNGC | 7 cut(s) | 191, 380, 755, 1179, 1374, 1617, 1629 |
| FokI | GGATG | 9 cut(s) | 17, 80, 239, 425, 611, 745, 819, 1514, 1547 |
| Fsp4HI | GCNGC | 7 cut(s) | 191, 380, 755, 1179, 1374, 1617, 1629 |
| GlaI | GCGC | 1 cut(s) | 737 |
| GluI | GCNGC | 7 cut(s) | 191, 380, 755, 1179, 1374, 1617, 1629 |
| GsaI | CCCAGC | 1 cut(s) | 1021 |
| GsuI | CTGGAG | 2 cut(s) | 1530, 1590 |
| HaeIII | GGCC | 1 cut(s) | 1871 |
| HapII | CCGG | 2 cut(s) | 165, 1875 |
| HgaI | GACGC | 3 cut(s) | 992, 1315, 1514 |
| HhaI | GCGC | 1 cut(s) | 738 |
| Hin1I | GRCGYC | 1 cut(s) | 1326 |
| Hin1II | CATG | 8 cut(s) | 125, 239, 662, 721, 1061, 1159, 1334, 1463 |
| Hin6I | GCGC | 1 cut(s) | 736 |
| HinP1I | GCGC | 1 cut(s) | 736 |
| HindIII | AAGCTT | 1 cut(s) | 1274 |
| HpaII | CCGG | 2 cut(s) | 165, 1875 |
| HphI | GGTGA | 4 cut(s) | 385, 568, 1421, 1849 |
| Hpy166II | GTNNAC | 2 cut(s) | 1148, 1358 |
| Hpy188III | TCNNGA | 7 cut(s) | 50, 122, 827, 862, 1499, 1765, 1912 |
| Hpy8I | GTNNAC | 2 cut(s) | 1148, 1358 |
| Hpy99I | CGWCG | 2 cut(s) | 134, 137 |
| HpyAV | CCTTC | 8 cut(s) | 478, 719, 806, 806, 1087, 1198, 1390, 1795 |
| HpyCH4III | ACNGT | 4 cut(s) | 494, 1051, 1309, 1690 |
| HpyCH4IV | ACGT | 1 cut(s) | 144 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 763, 1471, 1625, 1634 |
| HpyF3I | CTNAG | 5 cut(s) | 222, 1068, 1405, 1497, 1638 |
| HpySE526I | ACGT | 1 cut(s) | 144 |
| Hsp92I | GRCGYC | 1 cut(s) | 1326 |
| Hsp92II | CATG | 8 cut(s) | 125, 239, 662, 721, 1061, 1159, 1334, 1463 |
| HspAI | GCGC | 1 cut(s) | 736 |
| Ksp22I | TGATCA | 1 cut(s) | 1761 |
| Kzo9I | GATC | 2 cut(s) | 858, 1761 |
| LguI | GCTCTTC | 1 cut(s) | 657 |
| LmnI | GCTCC | 4 cut(s) | 589, 1084, 1481, 1899 |
| Lsp1109I | GCAGC | 7 cut(s) | 202, 366, 766, 1165, 1360, 1603, 1615 |
| LweI | GCATC | 4 cut(s) | 7, 643, 723, 995 |
| MaeII | ACGT | 1 cut(s) | 144 |
| MaeIII | GTNAC | 1 cut(s) | 827 |
| MalI | GATC | 2 cut(s) | 860, 1763 |
| MboI | GATC | 2 cut(s) | 858, 1761 |
| MhlI | GDGCHC | 2 cut(s) | 1750, 1904 |
| MmeI | TCCRAC | 3 cut(s) | 702, 852, 1877 |
| MseI | TTAA | 7 cut(s) | 57, 203, 461, 681, 702, 750, 926 |
| MslI | CAYNNNNRTG | 2 cut(s) | 240, 1160 |
| MspCI | CTTAAG | 1 cut(s) | 202 |
| MspI | CCGG | 2 cut(s) | 165, 1875 |
| MspR9I | CCNGG | 1 cut(s) | 1246 |
| MvaI | CCWGG | 1 cut(s) | 1246 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 763, 1471, 1625, 1634 |
| NcoI | CCATGG | 1 cut(s) | 1330 |
| NdeI | CATATG | 1 cut(s) | 1285 |
| NdeII | GATC | 2 cut(s) | 858, 1761 |
| NlaIII | CATG | 8 cut(s) | 125, 239, 662, 721, 1061, 1159, 1334, 1463 |
| NlaIV | GGNNCC | 2 cut(s) | 1086, 1665 |
| NmeAIII | GCCGAG | 1 cut(s) | 1405 |
| NmuCI | GTSAC | 1 cut(s) | 827 |
| PagI | TCATGA | 1 cut(s) | 121 |
| PciSI | GCTCTTC | 1 cut(s) | 657 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 96, 141, 435, 1655 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1268 |
| PkrI | GCNGC | 7 cut(s) | 192, 381, 756, 1180, 1375, 1618, 1630 |
| PpuMI | RGGWCCY | 1 cut(s) | 1653 |
| Psp5II | RGGWCCY | 1 cut(s) | 1653 |
| Psp6I | CCWGG | 1 cut(s) | 1244 |
| PspFI | CCCAGC | 1 cut(s) | 1017 |
| PspGI | CCWGG | 1 cut(s) | 1244 |
| PspN4I | GGNNCC | 2 cut(s) | 1086, 1665 |
| PspPI | GGNCC | 2 cut(s) | 1653, 1853 |
| PspPPI | RGGWCCY | 1 cut(s) | 1653 |
| PstI | CTGCAG | 1 cut(s) | 384 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1484 |
| RsaI | GTAC | 5 cut(s) | 496, 541, 840, 1149, 1784 |
| RsaNI | GTAC | 5 cut(s) | 495, 540, 839, 1148, 1783 |
| RseI | CAYNNNNRTG | 2 cut(s) | 240, 1160 |
| SapI | GCTCTTC | 1 cut(s) | 657 |
| SaqAI | TTAA | 7 cut(s) | 57, 203, 461, 681, 702, 750, 926 |
| SatI | GCNGC | 7 cut(s) | 191, 380, 755, 1179, 1374, 1617, 1629 |
| Sau3AI | GATC | 2 cut(s) | 858, 1761 |
| Sau96I | GGNCC | 2 cut(s) | 1653, 1853 |
| ScaI | AGTACT | 1 cut(s) | 840 |
| ScrFI | CCNGG | 1 cut(s) | 1246 |
| SduI | GDGCHC | 2 cut(s) | 1750, 1904 |
| SfaNI | GCATC | 4 cut(s) | 7, 643, 723, 995 |
| SfcI | CTRYAG | 1 cut(s) | 380 |
| SinI | GGWCC | 2 cut(s) | 1653, 1853 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 240, 1160 |
| SmlI | CTYRAG | 3 cut(s) | 202, 803, 1184 |
| SmoI | CTYRAG | 3 cut(s) | 202, 803, 1184 |
| SsiI | CCGC | 1 cut(s) | 1450 |
| SspI | AATATT | 2 cut(s) | 118, 1315 |
| StyD4I | CCNGG | 1 cut(s) | 1244 |
| StyI | CCWWGG | 1 cut(s) | 1330 |
| TaaI | ACNGT | 4 cut(s) | 494, 1051, 1309, 1690 |
| TaiI | ACGT | 1 cut(s) | 147 |
| TaqI | TCGA | 3 cut(s) | 1468, 1649, 1658 |
| TatI | WGTACW | 4 cut(s) | 494, 838, 1147, 1782 |
| Tru1I | TTAA | 7 cut(s) | 57, 203, 461, 681, 702, 750, 926 |
| Tru9I | TTAA | 7 cut(s) | 57, 203, 461, 681, 702, 750, 926 |
| TscAI | CASTG | 2 cut(s) | 1312, 1812 |
| TseFI | GTSAC | 1 cut(s) | 827 |
| TseI | GCWGC | 7 cut(s) | 190, 379, 754, 1178, 1373, 1616, 1628 |
| Tsp45I | GTSAC | 1 cut(s) | 827 |
| TspGWI | ACGGA | 1 cut(s) | 1845 |
| TspRI | CASTG | 2 cut(s) | 1312, 1812 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1268 |
| Vha464I | CTTAAG | 1 cut(s) | 202 |
| VpaK11BI | GGWCC | 2 cut(s) | 1653, 1853 |
| XapI | RAATTY | 3 cut(s) | 398, 921, 1124 |
| ZrmI | AGTACT | 1 cut(s) | 840 |