Something about silencing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43650 |
| fragaria_vesca | FvH4_5g27692 FvH4_5g27692 FvH4_5g27692 |
| malus_domestica | MD04G1048900.v1.1 MD17G1177700.v1.1 |
| prunus_persica | Prupe.1G206800_v2.0.a1 |
| pyrus_communis | pycom04g04300 |
| rosa_chinensis | RchiOBHm_Chr7g0219421 |
| rosa_laevigata | RLG00000002290 |
| rosa_multiflora | Rmu_sc0002460.1_g000021 Rmu_sc0003767.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00240050 |
| rosa_rugosa | Rorug07G0184900 |
| rosa_samantha | Rh7AG327800 Rh7BG317800 Rh7CG345200 Rh7DG323200 |
| rosa_wichuraiana | Rw7G027650 Rw7G027690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1114 |
| Acc36I | ACCTGC | 1 cut(s) | 1114 |
| AccB1I | GGYRCC | 1 cut(s) | 1406 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1352 |
| AccBSI | CCGCTC | 1 cut(s) | 701 |
| AciI | CCGC | 3 cut(s) | 699, 1534, 1947 |
| AclI | AACGTT | 1 cut(s) | 872 |
| AclWI | GGATC | 1 cut(s) | 761 |
| AcsI | RAATTY | 4 cut(s) | 558, 655, 1005, 1670 |
| AcuI | CTGAAG | 3 cut(s) | 1196, 1282, 1422 |
| AfaI | GTAC | 5 cut(s) | 625, 924, 1233, 1557, 1868 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 358, 359, 1352, 1558, 1946, 1947 |
| Alw21I | GWGCWC | 2 cut(s) | 1551, 1834 |
| Alw26I | GTCTC | 5 cut(s) | 594, 1049, 1176, 1492, 1946 |
| AlwI | GGATC | 1 cut(s) | 761 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1568 |
| AoxI | GGCC | 1 cut(s) | 898 |
| ApoI | RAATTY | 4 cut(s) | 558, 655, 1005, 1670 |
| AseI | ATTAAT | 3 cut(s) | 147, 210, 710 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 750 |
| AspLEI | GCGC | 4 cut(s) | 822, 1138, 1206, 1610 |
| AspS9I | GGNCC | 2 cut(s) | 1737, 1937 |
| AsuC2I | CCSGG | 1 cut(s) | 1330 |
| AsuHPI | GGTGA | 3 cut(s) | 652, 1505, 1598 |
| AvaII | GGWCC | 2 cut(s) | 1737, 1937 |
| BanI | GGYRCC | 1 cut(s) | 1406 |
| BanII | GRGCYC | 1 cut(s) | 1551 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 825, 857, 1215, 1247 |
| BauI | CACGAG | 1 cut(s) | 1827 |
| BbsI | GAAGAC | 2 cut(s) | 504, 1288 |
| Bbv12I | GWGCWC | 2 cut(s) | 1551, 1834 |
| BbvCI | CCTCAGC | 3 cut(s) | 159, 458, 1086 |
| BceAI | ACGGC | 2 cut(s) | 300, 1960 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 89, 123, 413, 447 |
| BclI | TGATCA | 2 cut(s) | 913, 1845 |
| BcnI | CCSGG | 1 cut(s) | 1330 |
| BcoDI | GTCTC | 5 cut(s) | 594, 1049, 1176, 1492, 1946 |
| BfmI | CTRYAG | 2 cut(s) | 1065, 1743 |
| BfoI | RGCGCY | 1 cut(s) | 1611 |
| BfuAI | ACCTGC | 1 cut(s) | 1114 |
| BmcAI | AGTACT | 1 cut(s) | 1557 |
| Bme1390I | CCNGG | 1 cut(s) | 1330 |
| Bme18I | GGWCC | 2 cut(s) | 1737, 1937 |
| BmgT120I | GGNCC | 2 cut(s) | 1737, 1937 |
| BmiI | GGNNCC | 2 cut(s) | 1408, 1939 |
| BmrFI | CCNGG | 1 cut(s) | 1330 |
| BmsI | GCATC | 8 cut(s) | 97, 376, 526, 727, 807, 1079, 1579, 1995 |
| BpiI | GAAGAC | 2 cut(s) | 504, 1288 |
| BpmI | CTGGAG | 3 cut(s) | 687, 1614, 1674 |
| Bpu10I | CCTNAGC | 3 cut(s) | 159, 458, 1086 |
| BpuEI | CTTGAG | 3 cut(s) | 530, 872, 1289 |
| BpuMI | CCSGG | 1 cut(s) | 1330 |
| Bsa29I | ATCGAT | 1 cut(s) | 1417 |
| BsaAI | YACGTR | 1 cut(s) | 566 |
| BsaBI | GATNNNNATC | 1 cut(s) | 981 |
| BsaI | GGTCTC | 1 cut(s) | 1946 |
| BsaJI | CCNNGG | 2 cut(s) | 1328, 1479 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 788, 818 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 358, 359, 1352, 1558, 1946, 1947 |
| Bse1I | ACTGG | 3 cut(s) | 247, 1563, 1657 |
| Bse3DI | GCAATG | 1 cut(s) | 1146 |
| Bse8I | GATNNNNATC | 1 cut(s) | 981 |
| BseCI | ATCGAT | 1 cut(s) | 1417 |
| BseDI | CCNNGG | 2 cut(s) | 1328, 1479 |
| BseGI | GGATG | 8 cut(s) | 313, 340, 688, 822, 916, 1032, 1624, 1645 |
| BseJI | GATNNNNATC | 1 cut(s) | 981 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 358, 359, 1352, 1558, 1946, 1947 |
| BseMI | GCAATG | 1 cut(s) | 1146 |
| BseMII | CTCAG | 6 cut(s) | 150, 449, 1077, 1503, 1523, 1736 |
| BseNI | ACTGG | 3 cut(s) | 247, 1563, 1657 |
| BseRI | GAGGAG | 2 cut(s) | 650, 686 |
| BshFI | GGCC | 1 cut(s) | 900 |
| BshNI | GGYRCC | 1 cut(s) | 1406 |
| BshVI | ATCGAT | 1 cut(s) | 1417 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1551, 1834 |
| BsiSI | CCGG | 2 cut(s) | 1330, 1981 |
| BslFI | GGGAC | 1 cut(s) | 1923 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 358, 359, 1352, 1558, 1946, 1947 |
| BsmAI | GTCTC | 5 cut(s) | 594, 1049, 1176, 1492, 1946 |
| BsmFI | GGGAC | 1 cut(s) | 1923 |
| BsnI | GGCC | 1 cut(s) | 900 |
| Bso31I | GGTCTC | 1 cut(s) | 1946 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1551, 1834 |
| Bsp1407I | TGTACA | 1 cut(s) | 1231 |
| Bsp143I | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| BspACI | CCGC | 3 cut(s) | 699, 1534, 1947 |
| BspANI | GGCC | 1 cut(s) | 900 |
| BspCNI | CTCAG | 6 cut(s) | 151, 450, 1078, 1502, 1522, 1735 |
| BspDI | ATCGAT | 1 cut(s) | 1417 |
| BspLI | GGNNCC | 2 cut(s) | 1408, 1939 |
| BspMI | ACCTGC | 1 cut(s) | 1114 |
| BspPI | GGATC | 1 cut(s) | 761 |
| BspT107I | GGYRCC | 1 cut(s) | 1406 |
| BspTNI | GGTCTC | 1 cut(s) | 1946 |
| BsrBI | CCGCTC | 1 cut(s) | 701 |
| BsrDI | GCAATG | 1 cut(s) | 1146 |
| BsrGI | TGTACA | 1 cut(s) | 1231 |
| BsrI | ACTGG | 3 cut(s) | 247, 1563, 1657 |
| BssECI | CCNNGG | 2 cut(s) | 1328, 1479 |
| BssMI | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| BssSI | CACGAG | 1 cut(s) | 1827 |
| BssT1I | CCWWGG | 1 cut(s) | 1479 |
| Bst2BI | CACGAG | 1 cut(s) | 1827 |
| Bst4CI | ACNGT | 4 cut(s) | 1066, 1097, 1411, 1747 |
| Bst6I | CTCTTC | 3 cut(s) | 147, 324, 438 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1709 |
| BstAUI | TGTACA | 1 cut(s) | 1231 |
| BstBAI | YACGTR | 1 cut(s) | 566 |
| BstC8I | GCNNGC | 4 cut(s) | 852, 931, 1434, 1834 |
| BstDEI | CTNAG | 6 cut(s) | 159, 458, 1086, 1489, 1509, 1722 |
| BstF5I | GGATG | 8 cut(s) | 313, 340, 688, 822, 916, 1032, 1624, 1645 |
| BstH2I | RGCGCY | 1 cut(s) | 1611 |
| BstHHI | GCGC | 4 cut(s) | 822, 1138, 1206, 1610 |
| BstKTI | GATC | 5 cut(s) | 346, 769, 916, 945, 1848 |
| BstMAI | GTCTC | 5 cut(s) | 594, 1049, 1176, 1492, 1946 |
| BstMBI | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 463, 485, 847, 1067, 1127, 1397, 1540, 1709, 1718 |
| BstSCI | CCNGG | 1 cut(s) | 1328 |
| BstSFI | CTRYAG | 2 cut(s) | 1065, 1743 |
| BstV2I | GAAGAC | 2 cut(s) | 504, 1288 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1457 |
| Bsu15I | ATCGAT | 1 cut(s) | 1417 |
| BsuRI | GGCC | 1 cut(s) | 900 |
| BsuTUI | ATCGAT | 1 cut(s) | 1417 |
| BtgZI | GCGATG | 1 cut(s) | 438 |
| BtsCI | GGATG | 8 cut(s) | 313, 340, 688, 822, 916, 1032, 1624, 1645 |
| BveI | ACCTGC | 1 cut(s) | 1114 |
| Cac8I | GCNNGC | 4 cut(s) | 852, 931, 1434, 1834 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1568 |
| CfoI | GCGC | 4 cut(s) | 822, 1138, 1206, 1610 |
| Cfr13I | GGNCC | 2 cut(s) | 1737, 1937 |
| ClaI | ATCGAT | 1 cut(s) | 1417 |
| CseI | GACGC | 1 cut(s) | 1397 |
| Csp6I | GTAC | 5 cut(s) | 624, 923, 1232, 1556, 1867 |
| CviAII | CATG | 7 cut(s) | 91, 317, 619, 802, 1142, 1240, 1544 |
| CviQI | GTAC | 5 cut(s) | 624, 923, 1232, 1556, 1867 |
| DdeI | CTNAG | 6 cut(s) | 159, 458, 1086, 1489, 1509, 1722 |
| DpnI | GATC | 5 cut(s) | 345, 768, 915, 944, 1847 |
| DpnII | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| Eam1104I | CTCTTC | 3 cut(s) | 147, 324, 438 |
| EarI | CTCTTC | 3 cut(s) | 147, 324, 438 |
| EciI | GGCGGA | 1 cut(s) | 1549 |
| Ecl136II | GAGCTC | 1 cut(s) | 1549 |
| Eco130I | CCWWGG | 1 cut(s) | 1479 |
| Eco24I | GRGCYC | 1 cut(s) | 1551 |
| Eco31I | GGTCTC | 1 cut(s) | 1946 |
| Eco47I | GGWCC | 2 cut(s) | 1737, 1937 |
| Eco53kI | GAGCTC | 1 cut(s) | 1549 |
| Eco57I | CTGAAG | 3 cut(s) | 1196, 1282, 1422 |
| EcoICRI | GAGCTC | 1 cut(s) | 1549 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1737 |
| EcoRI | GAATTC | 1 cut(s) | 655 |
| EcoT14I | CCWWGG | 1 cut(s) | 1479 |
| EcoT22I | ATGCAT | 2 cut(s) | 112, 318 |
| EcoT38I | GRGCYC | 1 cut(s) | 1551 |
| ErhI | CCWWGG | 1 cut(s) | 1479 |
| FaeI | CATG | 7 cut(s) | 94, 320, 622, 805, 1145, 1243, 1547 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 635, 667, 1280, 1312 |
| FaqI | GGGAC | 1 cut(s) | 1923 |
| FatI | CATG | 7 cut(s) | 90, 316, 618, 801, 1141, 1239, 1543 |
| FauI | CCCGC | 1 cut(s) | 1940 |
| FauNDI | CATATG | 1 cut(s) | 1369 |
| FbaI | TGATCA | 2 cut(s) | 913, 1845 |
| FokI | GGATG | 8 cut(s) | 320, 347, 695, 829, 903, 1039, 1631, 1652 |
| FriOI | GRGCYC | 1 cut(s) | 1551 |
| GlaI | GCGC | 4 cut(s) | 821, 1137, 1205, 1609 |
| GsuI | CTGGAG | 3 cut(s) | 687, 1614, 1674 |
| HaeII | RGCGCY | 1 cut(s) | 1611 |
| HaeIII | GGCC | 1 cut(s) | 900 |
| HapII | CCGG | 2 cut(s) | 1330, 1981 |
| HgaI | GACGC | 1 cut(s) | 1397 |
| HhaI | GCGC | 4 cut(s) | 822, 1138, 1206, 1610 |
| Hin1II | CATG | 7 cut(s) | 94, 320, 622, 805, 1145, 1243, 1547 |
| Hin6I | GCGC | 4 cut(s) | 820, 1136, 1204, 1608 |
| HinP1I | GCGC | 4 cut(s) | 820, 1136, 1204, 1608 |
| HpaII | CCGG | 2 cut(s) | 1330, 1981 |
| HphI | GGTGA | 3 cut(s) | 652, 1505, 1598 |
| Hpy166II | GTNNAC | 1 cut(s) | 1232 |
| Hpy188III | TCNNGA | 9 cut(s) | 140, 398, 704, 911, 946, 1849, 1924, 1959, 1996 |
| Hpy8I | GTNNAC | 1 cut(s) | 1232 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 224 |
| HpyAV | CCTTC | 7 cut(s) | 360, 803, 890, 890, 1171, 1282, 1397 |
| HpyCH4III | ACNGT | 4 cut(s) | 1066, 1097, 1411, 1747 |
| HpyCH4IV | ACGT | 2 cut(s) | 565, 872 |
| HpyCH4V | TGCA | 7 cut(s) | 110, 254, 316, 466, 740, 1436, 1703 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 463, 485, 847, 1067, 1127, 1397, 1540, 1709, 1718 |
| HpyF3I | CTNAG | 6 cut(s) | 159, 458, 1086, 1489, 1509, 1722 |
| HpySE526I | ACGT | 2 cut(s) | 565, 872 |
| Hsp92II | CATG | 7 cut(s) | 94, 320, 622, 805, 1145, 1243, 1547 |
| HspAI | GCGC | 4 cut(s) | 820, 1136, 1204, 1608 |
| Ksp22I | TGATCA | 2 cut(s) | 913, 1845 |
| Kzo9I | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| LmnI | GCTCC | 5 cut(s) | 63, 706, 1554, 1565, 1983 |
| LweI | GCATC | 8 cut(s) | 97, 376, 526, 727, 807, 1079, 1579, 1995 |
| MaeII | ACGT | 2 cut(s) | 565, 872 |
| MaeIII | GTNAC | 1 cut(s) | 1091 |
| MalI | GATC | 5 cut(s) | 345, 768, 915, 944, 1847 |
| MbiI | CCGCTC | 1 cut(s) | 701 |
| MboI | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| MhlI | GDGCHC | 2 cut(s) | 1551, 1834 |
| MlyI | GAGTC | 3 cut(s) | 28, 437, 1178 |
| MmeI | TCCRAC | 3 cut(s) | 786, 936, 1137 |
| Mph1103I | ATGCAT | 2 cut(s) | 112, 318 |
| MroXI | GAANNNNTTC | 1 cut(s) | 750 |
| MseI | TTAA | 7 cut(s) | 147, 210, 281, 545, 710, 776, 786 |
| MslI | CAYNNNNRTG | 3 cut(s) | 321, 1151, 1244 |
| MspA1I | CMGCKG | 1 cut(s) | 1133 |
| MspI | CCGG | 2 cut(s) | 1330, 1981 |
| MspR9I | CCNGG | 1 cut(s) | 1330 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 463, 485, 847, 1067, 1127, 1397, 1540, 1709, 1718 |
| NciI | CCSGG | 1 cut(s) | 1330 |
| NdeI | CATATG | 1 cut(s) | 1369 |
| NdeII | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| NlaIII | CATG | 7 cut(s) | 94, 320, 622, 805, 1145, 1243, 1547 |
| NlaIV | GGNNCC | 2 cut(s) | 1408, 1939 |
| NsiI | ATGCAT | 2 cut(s) | 112, 318 |
| PaqCI | CACCTGC | 1 cut(s) | 1114 |
| PdmI | GAANNNNTTC | 1 cut(s) | 750 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1352 |
| PleI | GAGTC | 3 cut(s) | 27, 436, 1177 |
| PpsI | GAGTC | 3 cut(s) | 27, 436, 1177 |
| Ppu21I | YACGTR | 1 cut(s) | 566 |
| PpuMI | RGGWCCY | 1 cut(s) | 1737 |
| PshBI | ATTAAT | 3 cut(s) | 147, 210, 710 |
| Psp124BI | GAGCTC | 1 cut(s) | 1551 |
| Psp1406I | AACGTT | 1 cut(s) | 872 |
| Psp5II | RGGWCCY | 1 cut(s) | 1737 |
| PspN4I | GGNNCC | 2 cut(s) | 1408, 1939 |
| PspPI | GGNCC | 2 cut(s) | 1737, 1937 |
| PspPPI | RGGWCCY | 1 cut(s) | 1737 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1568 |
| PvuII | CAGCTG | 1 cut(s) | 1133 |
| RsaI | GTAC | 5 cut(s) | 625, 924, 1233, 1557, 1868 |
| RsaNI | GTAC | 5 cut(s) | 624, 923, 1232, 1556, 1867 |
| RseI | CAYNNNNRTG | 3 cut(s) | 321, 1151, 1244 |
| SacI | GAGCTC | 1 cut(s) | 1551 |
| SaqAI | TTAA | 7 cut(s) | 147, 210, 281, 545, 710, 776, 786 |
| Sau3AI | GATC | 5 cut(s) | 343, 766, 913, 942, 1845 |
| Sau96I | GGNCC | 2 cut(s) | 1737, 1937 |
| ScaI | AGTACT | 1 cut(s) | 1557 |
| SchI | GAGTC | 3 cut(s) | 28, 437, 1178 |
| ScrFI | CCNGG | 1 cut(s) | 1330 |
| SduI | GDGCHC | 2 cut(s) | 1551, 1834 |
| SfaNI | GCATC | 8 cut(s) | 97, 376, 526, 727, 807, 1079, 1579, 1995 |
| SfcI | CTRYAG | 2 cut(s) | 1065, 1743 |
| SinI | GGWCC | 2 cut(s) | 1737, 1937 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 321, 1151, 1244 |
| SmlI | CTYRAG | 3 cut(s) | 509, 887, 1268 |
| SmoI | CTYRAG | 3 cut(s) | 509, 887, 1268 |
| SsiI | CCGC | 3 cut(s) | 699, 1534, 1947 |
| SspI | AATATT | 2 cut(s) | 208, 380 |
| SstI | GAGCTC | 1 cut(s) | 1551 |
| StyD4I | CCNGG | 1 cut(s) | 1328 |
| StyI | CCWWGG | 1 cut(s) | 1479 |
| TaaI | ACNGT | 4 cut(s) | 1066, 1097, 1411, 1747 |
| TaiI | ACGT | 2 cut(s) | 568, 875 |
| TaqI | TCGA | 4 cut(s) | 33, 1417, 1761, 1776 |
| TatI | WGTACW | 4 cut(s) | 922, 1231, 1555, 1866 |
| Tru1I | TTAA | 7 cut(s) | 147, 210, 281, 545, 710, 776, 786 |
| Tru9I | TTAA | 7 cut(s) | 147, 210, 281, 545, 710, 776, 786 |
| TspGWI | ACGGA | 1 cut(s) | 50 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1352 |
| VpaK11BI | GGWCC | 2 cut(s) | 1737, 1937 |
| VspI | ATTAAT | 3 cut(s) | 147, 210, 710 |
| XapI | RAATTY | 4 cut(s) | 558, 655, 1005, 1670 |
| XmnI | GAANNNNTTC | 1 cut(s) | 750 |
| ZrmI | AGTACT | 1 cut(s) | 1557 |
| Zsp2I | ATGCAT | 2 cut(s) | 112, 318 |