MD17G1204400.v1.1

Lys-63-specific deubiquitinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0007344
Physical Location & Seq
Forward (+)
24749858 .. 24757814
7957 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1204400.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGTCTTTGGCGTCTGTGAAAATGTCGGAGGACGTGTGGCTGACGTGCCTCACTCACGCATTGTCCACCGAGACGGAGGAGATCATGGGCCTCCTGCTTGGTGACATTGAGTGTGAAATTGGGGTACTGGGAATTGGTAATTGTGTGACAGCACTAATTTGGGGAGCATCACCTCAGACACGATCTGATCGGAGGAAGGATCGTGTGGAGACTAATCCTGAGCAGTTGGCTGCTGCATCAGCCCAGGCCGAGATATCCTTTATGTGTTTAAAAATGACACTGTCAACTGGAAGAACAACTAGAGTGATTGGGTGGTACCATTCACATCCTCATATTACAGTTCTCCCATCTCATGTTGTTGCTTTTTCTGTTGTGTTTCAAGGTGGAAGAAGGTGCAGAGAGAATGATAATGGTCCAAGGGAGAGACATAAGTTGATAGAGGAGACTTTACAAATAAGTAGAGAGATTAAAAGGCTAACCTTGTCCATAATGCAGCAAGCTAATTTTTCTAATAAATCAATAAAGGATTGCCTTCTTCTTTTTGCCATATGGCCACCATTAGATATGTCAAAATATGACGTGCGGACGCAGGCAATGTATCAACTTCTAGATTCTGGGTTTATTGGGCTCATATTTTCCTGTTTTAGTGAAGATATAAACAAGGTTGGGCGAATCCAAGTCATTGCATTTCAGTCCTCAGATGGGAAGCAGCATCACATGTCAAGACCCATATCTTTATCTCCTATACATAAAAGTCCGGTTATAGAAGTTGAATCGTCTTTAAGTACCTCAGAAAATGTACCAGCGAGATCCACCTTAACTAGAGCAGGGAGTCCTGAACAAGACACAGCTGATTCAAGAACTTCTGGAACTATAAAGGGTGGGGGAAGGTCCTCAGACCTAGGGCTTCTCTTTGCTAATGCAGATGCAAGTCATCTAGGAAGAGTTGGAGGAAACTACCAGACTGACACATCAAGCAACATCATTGGCGATATAGATCCCATGGATATGTCAGAGAGTATGCAAGAAGCAATGCACCGTTCTAACTTGGATATGAGTGGTGCCGAGTATGTCAGGAAAGAAGTTCCTCTTCATGTTTTACCGACCTCATCTCTTGTTAAGCTCGATTCACCTTTAATGTCATTCACAGAATTGCAACGAGTACTGTATGAAGAGGAGCAAGCGGCTTATAACCAAGCAATCTTGCAAAATATGAGGGATGGGAAAGTGCATCCACTTACTTTCATACACCATACATCAATGTACCAGTCTTCCATGTGCAAATTAATCGAATATTGTTTGAGTCCTGCCATAAGTGCACTGCAATGTCGGTTAAGAGAGAATGAAACTCGGTTAGCAGTGCTCACCGATGAAGTGAAGAATTTGGAAACCGAGATGCATAGAACAAGCGAGTCAAACTCAGGATCTCCTCGTCCAGTTTCATCGCCTGTACTCCGTGGAAGTGCTCCGTTGGGGCACAGGGACTTGTTTCATCCAACTGAATCTGTCAGTGCAAGGAGTCTGGCTGGTTCTGGCAGTCGGAGCCGAAAAGGTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0003674 GO:0003824 GO:0004843 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006282 GO:0006302 GO:0006325 GO:0006464 GO:0006508 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0008237 GO:0009314 GO:0009628 GO:0009893 GO:0009987 GO:0010212 GO:0010564 GO:0010604 GO:0010948 GO:0016043 GO:0016569 GO:0016570 GO:0016578 GO:0016579 GO:0016787 GO:0019219 GO:0019222 GO:0019538 GO:0019783 GO:0023052 GO:0031323 GO:0031325 GO:0031570 GO:0031572 GO:0031593 GO:0032991 GO:0033554 GO:0034641 GO:0035556 GO:0036211 GO:0036459 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045739 GO:0045786 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0070011 GO:0070531 GO:0070536 GO:0070537 GO:0070552 GO:0070646 GO:0070647 GO:0071704 GO:0071840 GO:0072395 GO:0072401 GO:0072422 GO:0072425 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0101005 GO:0140030 GO:0140096 GO:1901360 GO:1901564 GO:1901987 GO:1901988 GO:1902749 GO:1902750 GO:2001020 GO:2001022
KEGG Pathways
Metabolic & Signaling
ko03440 ko04621 map03440 map04621
Pfam Domains
Protein Families
JAB

Protein Analysis

520

Amino Acids

57.28

Weight (kDa)

6.32

Isoelectric Point (pI)

69.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JAB PF01398 3 - 119 6.5e-12 JAB1/Mov34/MPN/PAD-1 ubiquitin protease
BRCC36_C PF18110 379 - 462 2.1e-22 BRCC36 C-terminal helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
Acc65I GGTACC 1 cut(s) 315
AccB1I GGYRCC 2 cut(s) 315, 1061
AciI CCGC 2 cut(s) 583, 1184
AclWI GGATC 4 cut(s) 207, 804, 992, 1432
AcoI YGGCCR 1 cut(s) 551
AcsI RAATTY 1 cut(s) 1381
AcyI GRCGYC 1 cut(s) 11
AfaI GTAC 7 cut(s) 126, 317, 787, 801, 1164, 1265, 1452
AfiI CCNNNNNNNGG 1 cut(s) 702
AflIII ACRYGT 2 cut(s) 33, 717
AgsI TTSAA 3 cut(s) 380, 773, 858
AjiI CACGTC 3 cut(s) 34, 45, 580
AjnI CCWGG 1 cut(s) 243
AluBI AGCT 3 cut(s) 500, 851, 1123
AluI AGCT 3 cut(s) 500, 851, 1123
Alw21I GWGCWC 3 cut(s) 1321, 1365, 1468
Alw26I GTCTC 4 cut(s) 65, 203, 418, 437
Alw44I GTGCAC 1 cut(s) 1317
AlwI GGATC 4 cut(s) 207, 804, 992, 1432
AoxI GGCC 3 cut(s) 88, 246, 551
ApaLI GTGCAC 1 cut(s) 1317
ApeKI GCWGC 4 cut(s) 230, 233, 493, 709
ApoI RAATTY 1 cut(s) 1381
AseI ATTAAT 1 cut(s) 1286
Asp700I GAANNNNTTC 1 cut(s) 1552
Asp718I GGTACC 1 cut(s) 315
AspA2I CCTAGG 1 cut(s) 901
AspS9I GGNCC 3 cut(s) 88, 413, 891
AsuHPI GGTGA 4 cut(s) 113, 162, 1122, 1357
AvaII GGWCC 2 cut(s) 413, 891
AvrII CCTAGG 1 cut(s) 901
BaeGI GKGCMC 2 cut(s) 1321, 1479
BalI TGGCCA 1 cut(s) 553
BanI GGYRCC 2 cut(s) 315, 1061
BanII GRGCYC 1 cut(s) 630
BbsI GAAGAC 1 cut(s) 1263
Bbv12I GWGCWC 3 cut(s) 1321, 1365, 1468
BbvI GCAGC 4 cut(s) 217, 220, 505, 721
BccI CCATC 3 cut(s) 355, 695, 1214
BcgI CGANNNNNNTGC 2 cut(s) 1270, 1304
BciT130I CCWGG 1 cut(s) 245
BcoDI GTCTC 4 cut(s) 65, 203, 418, 437
BfaI CTAG 5 cut(s) 300, 608, 822, 902, 938
BisI GCNGC 5 cut(s) 231, 234, 494, 710, 1185
BlnI CCTAGG 1 cut(s) 901
BlsI GCNGC 5 cut(s) 232, 235, 495, 711, 1186
BmcAI AGTACT 1 cut(s) 1164
Bme1390I CCNGG 1 cut(s) 245
Bme18I GGWCC 2 cut(s) 413, 891
BmgBI CACGTC 3 cut(s) 34, 45, 580
BmgT120I GGNCC 3 cut(s) 88, 413, 891
BmiI GGNNCC 3 cut(s) 317, 1063, 1544
BmrFI CCNGG 1 cut(s) 245
BmrI ACTGGG 1 cut(s) 137
BmsI GCATC 6 cut(s) 176, 245, 721, 916, 1240, 1386
BmuI ACTGGG 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 1263
BplI GAGNNNNNCTC 2 cut(s) 1403, 1435
Bpu10I CCTNAGC 1 cut(s) 219
BsaBI GATNNNNATC 1 cut(s) 996
BsaHI GRCGYC 1 cut(s) 11
BsaJI CCNNGG 5 cut(s) 243, 416, 901, 1002, 1456
BsaWI WCCGGW 1 cut(s) 757
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 1 cut(s) 702
Bse1I ACTGG 4 cut(s) 132, 292, 1267, 1436
Bse3DI GCAATG 4 cut(s) 600, 681, 1038, 1331
Bse8I GATNNNNATC 1 cut(s) 996
BseBI CCWGG 1 cut(s) 245
BseDI CCNNGG 5 cut(s) 243, 416, 901, 1002, 1456
BseGI GGATG 4 cut(s) 325, 1225, 1231, 1492
BseJI GATNNNNATC 1 cut(s) 996
BseLI CCNNNNNNNGG 1 cut(s) 702
BseMI GCAATG 4 cut(s) 600, 681, 1038, 1331
BseMII CTCAG 6 cut(s) 188, 210, 711, 804, 909, 1434
BseNI ACTGG 4 cut(s) 132, 292, 1267, 1436
BseRI GAGGAG 4 cut(s) 92, 455, 1190, 1419
BseSI GKGCMC 2 cut(s) 1321, 1479
BseXI GCAGC 4 cut(s) 217, 220, 505, 721
BsgI GTGCAG 1 cut(s) 415
BshFI GGCC 3 cut(s) 90, 248, 553
BshNI GGYRCC 2 cut(s) 315, 1061
BsiHKAI GWGCWC 3 cut(s) 1321, 1365, 1468
BsiSI CCGG 1 cut(s) 758
BslFI GGGAC 1 cut(s) 1496
BslI CCNNNNNNNGG 1 cut(s) 702
BsmAI GTCTC 4 cut(s) 65, 203, 418, 437
BsmBI CGTCTC 1 cut(s) 65
BsmFI GGGAC 1 cut(s) 1496
BsnI GGCC 3 cut(s) 90, 248, 553
Bsp1286I GDGCHC 5 cut(s) 630, 1321, 1365, 1468, 1479
Bsp143I GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
Bsp19I CCATGG 1 cut(s) 1002
BspACI CCGC 2 cut(s) 583, 1184
BspANI GGCC 3 cut(s) 90, 248, 553
BspCNI CTCAG 6 cut(s) 187, 211, 710, 803, 908, 1433
BspLI GGNNCC 3 cut(s) 317, 1063, 1544
BspPI GGATC 4 cut(s) 207, 804, 992, 1432
BspT107I GGYRCC 2 cut(s) 315, 1061
BsrDI GCAATG 4 cut(s) 600, 681, 1038, 1331
BsrI ACTGG 4 cut(s) 132, 292, 1267, 1436
BssECI CCNNGG 5 cut(s) 243, 416, 901, 1002, 1456
BssMI GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
BssNI GRCGYC 1 cut(s) 11
BssT1I CCWWGG 3 cut(s) 416, 901, 1002
Bst2UI CCWGG 1 cut(s) 245
Bst4CI ACNGT 4 cut(s) 282, 340, 1040, 1167
Bst6I CTCTTC 3 cut(s) 937, 1095, 1167
BstACI GRCGYC 1 cut(s) 11
BstC8I GCNNGC 3 cut(s) 498, 591, 1182
BstDEI CTNAG 6 cut(s) 174, 219, 697, 790, 895, 1420
BstDSI CCRYGG 2 cut(s) 1002, 1456
BstF5I GGATG 4 cut(s) 325, 1225, 1231, 1492
BstKTI GATC 7 cut(s) 84, 185, 190, 202, 812, 1000, 1427
BstMAI GTCTC 4 cut(s) 65, 203, 418, 437
BstMBI GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
BstMWI GCNNNNNNNGC 3 cut(s) 239, 1316, 1542
BstNI CCWGG 1 cut(s) 245
BstNSI RCATGY 1 cut(s) 721
BstSCI CCNGG 1 cut(s) 243
BstSLI GKGCMC 2 cut(s) 1321, 1479
BstV1I GCAGC 4 cut(s) 217, 220, 505, 721
BstV2I GAAGAC 1 cut(s) 1263
BstX2I RGATCY 3 cut(s) 809, 997, 1424
BstYI RGATCY 3 cut(s) 809, 997, 1424
BsuRI GGCC 3 cut(s) 90, 248, 553
BtgI CCRYGG 2 cut(s) 1002, 1456
BtgZI GCGATG 1 cut(s) 1428
BtrI CACGTC 3 cut(s) 34, 45, 580
BtsCI GGATG 4 cut(s) 325, 1225, 1231, 1492
BtsI GCAGTG 2 cut(s) 1319, 1365
BtsIMutI CAGTG 4 cut(s) 278, 1319, 1365, 1516
Cac8I GCNNGC 3 cut(s) 498, 591, 1182
Cfr13I GGNCC 3 cut(s) 88, 413, 891
CseI GACGC 1 cut(s) 595
Csp6I GTAC 7 cut(s) 125, 316, 786, 800, 1163, 1264, 1451
CviAII CATG 6 cut(s) 85, 353, 718, 1003, 1094, 1276
CviQI GTAC 7 cut(s) 125, 316, 786, 800, 1163, 1264, 1451
DdeI CTNAG 6 cut(s) 174, 219, 697, 790, 895, 1420
DpnI GATC 7 cut(s) 83, 184, 189, 201, 811, 999, 1426
DpnII GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
DraI TTTAAA 1 cut(s) 270
EaeI YGGCCR 1 cut(s) 551
Eam1104I CTCTTC 3 cut(s) 937, 1095, 1167
EarI CTCTTC 3 cut(s) 937, 1095, 1167
Eco130I CCWWGG 3 cut(s) 416, 901, 1002
Eco24I GRGCYC 1 cut(s) 630
Eco32I GATATC 1 cut(s) 255
Eco47I GGWCC 2 cut(s) 413, 891
EcoO109I RGGNCCY 1 cut(s) 891
EcoRII CCWGG 1 cut(s) 243
EcoRV GATATC 1 cut(s) 255
EcoT14I CCWWGG 3 cut(s) 416, 901, 1002
EcoT22I ATGCAT 1 cut(s) 1401
EcoT38I GRGCYC 1 cut(s) 630
ErhI CCWWGG 3 cut(s) 416, 901, 1002
Esp3I CGTCTC 1 cut(s) 65
FaeI CATG 6 cut(s) 88, 356, 721, 1006, 1097, 1279
FalI AAGNNNNNCTT 2 cut(s) 1074, 1106
FaqI GGGAC 1 cut(s) 1496
FatI CATG 6 cut(s) 84, 352, 717, 1002, 1093, 1275
FauNDI CATATG 1 cut(s) 548
Fnu4HI GCNGC 5 cut(s) 231, 234, 494, 710, 1185
FokI GGATG 4 cut(s) 312, 1218, 1232, 1479
FriOI GRGCYC 1 cut(s) 630
Fsp4HI GCNGC 5 cut(s) 231, 234, 494, 710, 1185
FspBI CTAG 5 cut(s) 300, 608, 822, 902, 938
GluI GCNGC 5 cut(s) 231, 234, 494, 710, 1185
HaeIII GGCC 3 cut(s) 90, 248, 553
HapII CCGG 1 cut(s) 758
HgaI GACGC 1 cut(s) 595
Hin1I GRCGYC 1 cut(s) 11
Hin1II CATG 6 cut(s) 88, 356, 721, 1006, 1097, 1279
HincII GTYRAC 1 cut(s) 285
HindII GTYRAC 1 cut(s) 285
HpaII CCGG 1 cut(s) 758
HphI GGTGA 4 cut(s) 113, 162, 1122, 1357
Hpy166II GTNNAC 3 cut(s) 66, 285, 1319
Hpy188I TCNGA 9 cut(s) 28, 177, 187, 192, 700, 793, 898, 1015, 1542
Hpy188III TCNNGA 8 cut(s) 218, 608, 723, 836, 858, 867, 1075, 1422
Hpy8I GTNNAC 3 cut(s) 66, 285, 1319
HpyAV CCTTC 4 cut(s) 190, 384, 542, 882
HpyCH4III ACNGT 4 cut(s) 282, 340, 1040, 1167
HpyCH4IV ACGT 3 cut(s) 33, 44, 579
HpyF10VI GCNNNNNNNGC 3 cut(s) 239, 1316, 1542
HpyF3I CTNAG 6 cut(s) 174, 219, 697, 790, 895, 1420
HpySE526I ACGT 3 cut(s) 33, 44, 579
Hsp92I GRCGYC 1 cut(s) 11
Hsp92II CATG 6 cut(s) 88, 356, 721, 1006, 1097, 1279
KpnI GGTACC 1 cut(s) 319
Kzo9I GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
LmnI GCTCC 4 cut(s) 164, 1177, 1471, 1542
Lsp1109I GCAGC 4 cut(s) 217, 220, 505, 721
LweI GCATC 6 cut(s) 176, 245, 721, 916, 1240, 1386
MaeI CTAG 5 cut(s) 300, 608, 822, 902, 938
MaeII ACGT 3 cut(s) 33, 44, 579
MaeIII GTNAC 2 cut(s) 101, 145
MalI GATC 7 cut(s) 83, 184, 189, 201, 811, 999, 1426
MboI GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
MboII GAAGA 9 cut(s) 303, 399, 527, 662, 954, 1082, 1184, 1263, 1390
MflI RGATCY 3 cut(s) 809, 997, 1424
MhlI GDGCHC 5 cut(s) 630, 1321, 1365, 1468, 1479
MlsI TGGCCA 1 cut(s) 553
MluCI AATT 8 cut(s) 117, 132, 139, 156, 502, 1151, 1283, 1381
MluNI TGGCCA 1 cut(s) 553
MlyI GAGTC 4 cut(s) 841, 1312, 1421, 1528
MmeI TCCRAC 4 cut(s) 6, 928, 1520, 1520
Mox20I TGGCCA 1 cut(s) 553
Mph1103I ATGCAT 1 cut(s) 1401
MroXI GAANNNNTTC 1 cut(s) 1552
MscI TGGCCA 1 cut(s) 553
MseI TTAA 8 cut(s) 269, 468, 782, 818, 1119, 1136, 1286, 1334
MslI CAYNNNNRTG 2 cut(s) 1007, 1324
Msp20I TGGCCA 1 cut(s) 553
MspA1I CMGCKG 1 cut(s) 851
MspI CCGG 1 cut(s) 758
MspR9I CCNGG 1 cut(s) 245
MvaI CCWGG 1 cut(s) 245
MwoI GCNNNNNNNGC 3 cut(s) 239, 1316, 1542
NcoI CCATGG 1 cut(s) 1002
NdeI CATATG 1 cut(s) 548
NdeII GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
NlaIII CATG 6 cut(s) 88, 356, 721, 1006, 1097, 1279
NlaIV GGNNCC 3 cut(s) 317, 1063, 1544
NmeAIII GCCGAG 2 cut(s) 274, 1090
NmuCI GTSAC 2 cut(s) 101, 145
NsiI ATGCAT 1 cut(s) 1401
NspI RCATGY 1 cut(s) 721
PciI ACATGT 1 cut(s) 717
PdmI GAANNNNTTC 1 cut(s) 1552
PfeI GAWTC 6 cut(s) 611, 672, 773, 854, 1127, 1502
PflFI GACNNNGTC 1 cut(s) 280
PkrI GCNGC 5 cut(s) 232, 235, 495, 711, 1186
PleI GAGTC 4 cut(s) 840, 1311, 1420, 1527
PpsI GAGTC 4 cut(s) 840, 1311, 1420, 1527
PpuMI RGGWCCY 1 cut(s) 891
PscI ACATGT 1 cut(s) 717
PshBI ATTAAT 1 cut(s) 1286
PsiI TTATAA 1 cut(s) 1191
Psp5II RGGWCCY 1 cut(s) 891
Psp6I CCWGG 1 cut(s) 243
PspGI CCWGG 1 cut(s) 243
PspN4I GGNNCC 3 cut(s) 317, 1063, 1544
PspPI GGNCC 3 cut(s) 88, 413, 891
PspPPI RGGWCCY 1 cut(s) 891
PsuI RGATCY 3 cut(s) 809, 997, 1424
PsyI GACNNNGTC 1 cut(s) 280
PvuII CAGCTG 1 cut(s) 851
RsaI GTAC 7 cut(s) 126, 317, 787, 801, 1164, 1265, 1452
RsaNI GTAC 7 cut(s) 125, 316, 786, 800, 1163, 1264, 1451
RseI CAYNNNNRTG 2 cut(s) 1007, 1324
SaqAI TTAA 8 cut(s) 269, 468, 782, 818, 1119, 1136, 1286, 1334
SatI GCNGC 5 cut(s) 231, 234, 494, 710, 1185
Sau3AI GATC 7 cut(s) 81, 182, 187, 199, 809, 997, 1424
Sau96I GGNCC 3 cut(s) 88, 413, 891
ScaI AGTACT 1 cut(s) 1164
SchI GAGTC 4 cut(s) 841, 1312, 1421, 1528
ScrFI CCNGG 1 cut(s) 245
SduI GDGCHC 5 cut(s) 630, 1321, 1365, 1468, 1479
SfaNI GCATC 6 cut(s) 176, 245, 721, 916, 1240, 1386
SinI GGWCC 2 cut(s) 413, 891
SmiMI CAYNNNNRTG 2 cut(s) 1007, 1324
Sse9I AATT 8 cut(s) 117, 132, 139, 156, 502, 1151, 1283, 1381
SsiI CCGC 2 cut(s) 583, 1184
SspI AATATT 1 cut(s) 1295
SspMI CTAG 5 cut(s) 300, 608, 822, 902, 938
StyD4I CCNGG 1 cut(s) 243
StyI CCWWGG 3 cut(s) 416, 901, 1002
TaaI ACNGT 4 cut(s) 282, 340, 1040, 1167
TaiI ACGT 3 cut(s) 36, 47, 582
TaqI TCGA 2 cut(s) 1125, 1290
TasI AATT 8 cut(s) 117, 132, 139, 156, 502, 1151, 1283, 1381
TatI WGTACW 2 cut(s) 1162, 1450
TauI GCSGC 1 cut(s) 1187
TfiI GAWTC 6 cut(s) 611, 672, 773, 854, 1127, 1502
Tru1I TTAA 8 cut(s) 269, 468, 782, 818, 1119, 1136, 1286, 1334
Tru9I TTAA 8 cut(s) 269, 468, 782, 818, 1119, 1136, 1286, 1334
TscAI CASTG 4 cut(s) 285, 1326, 1365, 1516
TseFI GTSAC 2 cut(s) 101, 145
TseI GCWGC 4 cut(s) 230, 233, 493, 709
Tsp45I GTSAC 2 cut(s) 101, 145
TspDTI ATGAA 8 cut(s) 1082, 1185, 1234, 1359, 1386, 1431, 1481, 1545
TspGWI ACGGA 3 cut(s) 89, 1445, 1458
TspRI CASTG 4 cut(s) 285, 1326, 1365, 1516
Tth111I GACNNNGTC 1 cut(s) 280
VneI GTGCAC 1 cut(s) 1317
VpaK11BI GGWCC 2 cut(s) 413, 891
VspI ATTAAT 1 cut(s) 1286
XapI RAATTY 1 cut(s) 1381
XbaI TCTAGA 1 cut(s) 607
XceI RCATGY 1 cut(s) 721
XmaJI CCTAGG 1 cut(s) 901
XmnI GAANNNNTTC 1 cut(s) 1552
XspI CTAG 5 cut(s) 300, 608, 822, 902, 938
ZrmI AGTACT 1 cut(s) 1164
Zsp2I ATGCAT 1 cut(s) 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.