Lys-63-specific deubiquitinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80210 AT1G80210 AT3G06820 AT3G06820 AT3G06820 |
| fragaria_vesca | FvH4_6g30340 FvH4_6g30340 FvH4_6g30340 |
| malus_domestica | MD09G1221000.v1.1 MD17G1204400.v1.1 |
| prunus_persica | Prupe.3G079900_v2.0.a1 Prupe.3G079900_v2.0.a1 Prupe.3G079900_v2.0.a1 |
| pyrus_communis | pycom1094g00120 pycom17g20830 |
| rosa_chinensis | RchiOBHm_Chr2g0136621 |
| rosa_laevigata | RLG00000019542 |
| rosa_multiflora | Rmu_sc0006440.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00108160 |
| rosa_rugosa | Rorug02G0332100 |
| rosa_samantha | Rh2AG382900 Rh2BG389500 Rh2CG369200 Rh2DG406300 |
| rosa_wichuraiana | Rw2G031300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 279 |
| AccB1I | GGYRCC | 1 cut(s) | 279 |
| AccBSI | CCGCTC | 1 cut(s) | 935 |
| AciI | CCGC | 2 cut(s) | 630, 935 |
| AclWI | GGATC | 7 cut(s) | 105, 108, 121, 133, 743, 1183, 1294 |
| AcsI | RAATTY | 3 cut(s) | 106, 796, 1098 |
| AcuI | CTGAAG | 2 cut(s) | 624, 708 |
| AfaI | GTAC | 4 cut(s) | 281, 327, 532, 915 |
| AfeI | AGCGCT | 1 cut(s) | 1216 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 447 |
| AflII | CTTAAG | 1 cut(s) | 1051 |
| AflIII | ACRYGT | 2 cut(s) | 462, 1148 |
| AgsI | TTSAA | 3 cut(s) | 504, 603, 1043 |
| AjnI | CCWGG | 1 cut(s) | 1264 |
| AleI | CACNNNNGTG | 1 cut(s) | 1075 |
| AluBI | AGCT | 7 cut(s) | 32, 53, 161, 479, 578, 596, 874 |
| AluI | AGCT | 7 cut(s) | 32, 53, 161, 479, 578, 596, 874 |
| AlwI | GGATC | 7 cut(s) | 105, 108, 121, 133, 743, 1183, 1294 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 578, 1265 |
| Aor51HI | AGCGCT | 1 cut(s) | 1216 |
| AoxI | GGCC | 1 cut(s) | 1225 |
| ApeKI | GCWGC | 2 cut(s) | 454, 578 |
| ApoI | RAATTY | 3 cut(s) | 106, 796, 1098 |
| AseI | ATTAAT | 1 cut(s) | 1037 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 637 |
| Asp718I | GGTACC | 1 cut(s) | 279 |
| AspLEI | GCGC | 1 cut(s) | 1217 |
| AspS9I | GGNCC | 1 cut(s) | 1262 |
| AsuHPI | GGTGA | 1 cut(s) | 873 |
| AsuII | TTCGAA | 1 cut(s) | 794 |
| AvaII | GGWCC | 1 cut(s) | 1262 |
| BamHI | GGATCC | 1 cut(s) | 113 |
| BanI | GGYRCC | 1 cut(s) | 279 |
| BbvCI | CCTCAGC | 1 cut(s) | 669 |
| BbvI | GCAGC | 2 cut(s) | 466, 565 |
| BccI | CCATC | 2 cut(s) | 237, 440 |
| BciT130I | CCWGG | 1 cut(s) | 1266 |
| BfaI | CTAG | 5 cut(s) | 162, 264, 353, 567, 663 |
| BfmI | CTRYAG | 3 cut(s) | 120, 474, 1073 |
| BfoI | RGCGCY | 1 cut(s) | 1218 |
| BfrI | CTTAAG | 1 cut(s) | 1051 |
| BglII | AGATCT | 2 cut(s) | 554, 635 |
| BisI | GCNGC | 3 cut(s) | 455, 579, 936 |
| BlsI | GCNGC | 3 cut(s) | 456, 580, 937 |
| BmcAI | AGTACT | 1 cut(s) | 915 |
| Bme1390I | CCNGG | 1 cut(s) | 1266 |
| Bme18I | GGWCC | 1 cut(s) | 1262 |
| BmgT120I | GGNCC | 1 cut(s) | 1262 |
| BmiI | GGNNCC | 2 cut(s) | 115, 281 |
| BmrFI | CCNGG | 1 cut(s) | 1266 |
| BmsI | GCATC | 3 cut(s) | 160, 466, 991 |
| BpmI | CTGGAG | 1 cut(s) | 471 |
| Bpu10I | CCTNAGC | 1 cut(s) | 669 |
| Bpu14I | TTCGAA | 1 cut(s) | 794 |
| BsaAI | YACGTR | 1 cut(s) | 1151 |
| BsaBI | GATNNNNATC | 1 cut(s) | 747 |
| BsaJI | CCNNGG | 3 cut(s) | 140, 753, 1247 |
| BsaWI | WCCGGW | 1 cut(s) | 698 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 447 |
| Bse1I | ACTGG | 2 cut(s) | 488, 548 |
| Bse3DI | GCAATG | 2 cut(s) | 789, 1109 |
| Bse8I | GATNNNNATC | 1 cut(s) | 747 |
| BseBI | CCWGG | 1 cut(s) | 1266 |
| BseDI | CCNNGG | 3 cut(s) | 140, 753, 1247 |
| BseGI | GGATG | 2 cut(s) | 289, 982 |
| BseJI | GATNNNNATC | 1 cut(s) | 747 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 447 |
| BseMI | GCAATG | 2 cut(s) | 789, 1109 |
| BseMII | CTCAG | 6 cut(s) | 347, 456, 549, 660, 756, 807 |
| BseNI | ACTGG | 2 cut(s) | 488, 548 |
| BseRI | GAGGAG | 4 cut(s) | 63, 938, 941, 1170 |
| BseXI | GCAGC | 2 cut(s) | 466, 565 |
| BshFI | GGCC | 1 cut(s) | 1227 |
| BshNI | GGYRCC | 1 cut(s) | 279 |
| BsiSI | CCGG | 1 cut(s) | 699 |
| BslFI | GGGAC | 3 cut(s) | 211, 983, 1247 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 447 |
| BsmFI | GGGAC | 3 cut(s) | 211, 983, 1247 |
| BsnI | GGCC | 1 cut(s) | 1227 |
| Bsp119I | TTCGAA | 1 cut(s) | 794 |
| Bsp143I | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| Bsp19I | CCATGG | 1 cut(s) | 753 |
| BspACI | CCGC | 2 cut(s) | 630, 935 |
| BspANI | GGCC | 1 cut(s) | 1227 |
| BspCNI | CTCAG | 6 cut(s) | 346, 455, 548, 661, 757, 808 |
| BspLI | GGNNCC | 2 cut(s) | 115, 281 |
| BspMAI | CTGCAG | 1 cut(s) | 1077 |
| BspPI | GGATC | 7 cut(s) | 105, 108, 121, 133, 743, 1183, 1294 |
| BspT104I | TTCGAA | 1 cut(s) | 794 |
| BspT107I | GGYRCC | 1 cut(s) | 279 |
| BspTI | CTTAAG | 1 cut(s) | 1051 |
| BsrBI | CCGCTC | 1 cut(s) | 935 |
| BsrDI | GCAATG | 2 cut(s) | 789, 1109 |
| BsrI | ACTGG | 2 cut(s) | 488, 548 |
| BssECI | CCNNGG | 3 cut(s) | 140, 753, 1247 |
| BssMI | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| BssT1I | CCWWGG | 3 cut(s) | 140, 753, 1247 |
| Bst2UI | CCWGG | 1 cut(s) | 1266 |
| Bst4CI | ACNGT | 3 cut(s) | 304, 791, 918 |
| BstAFI | CTTAAG | 1 cut(s) | 1051 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 578 |
| BstBAI | YACGTR | 1 cut(s) | 1151 |
| BstBI | TTCGAA | 1 cut(s) | 794 |
| BstC8I | GCNNGC | 2 cut(s) | 628, 933 |
| BstDEI | CTNAG | 6 cut(s) | 333, 442, 535, 669, 765, 816 |
| BstDSI | CCRYGG | 1 cut(s) | 753 |
| BstF5I | GGATG | 2 cut(s) | 289, 982 |
| BstH2I | RGCGCY | 1 cut(s) | 1218 |
| BstHHI | GCGC | 1 cut(s) | 1217 |
| BstKTI | GATC | 9 cut(s) | 21, 100, 116, 128, 557, 638, 751, 1178, 1289 |
| BstMBI | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 578, 1067, 1204 |
| BstNI | CCWGG | 1 cut(s) | 1266 |
| BstNSI | RCATGY | 1 cut(s) | 466 |
| BstSCI | CCNGG | 1 cut(s) | 1264 |
| BstSFI | CTRYAG | 3 cut(s) | 120, 474, 1073 |
| BstV1I | GCAGC | 2 cut(s) | 466, 565 |
| BstX2I | RGATCY | 5 cut(s) | 113, 125, 554, 635, 1175 |
| BstYI | RGATCY | 5 cut(s) | 113, 125, 554, 635, 1175 |
| BsuRI | GGCC | 1 cut(s) | 1227 |
| BtgI | CCRYGG | 1 cut(s) | 753 |
| BtgZI | GCGATG | 1 cut(s) | 353 |
| BtsCI | GGATG | 2 cut(s) | 289, 982 |
| BtsI | GCAGTG | 3 cut(s) | 1070, 1082, 1202 |
| BtsIMutI | CAGTG | 5 cut(s) | 397, 1070, 1082, 1116, 1202 |
| Cac8I | GCNNGC | 2 cut(s) | 628, 933 |
| CaiI | CAGNNNCTG | 2 cut(s) | 578, 1265 |
| CfoI | GCGC | 1 cut(s) | 1217 |
| Cfr13I | GGNCC | 1 cut(s) | 1262 |
| Csp6I | GTAC | 4 cut(s) | 280, 326, 531, 914 |
| CviAII | CATG | 6 cut(s) | 92, 153, 317, 463, 754, 1027 |
| CviQI | GTAC | 4 cut(s) | 280, 326, 531, 914 |
| DdeI | CTNAG | 6 cut(s) | 333, 442, 535, 669, 765, 816 |
| DpnI | GATC | 9 cut(s) | 20, 99, 115, 127, 556, 637, 750, 1177, 1288 |
| DpnII | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| EciI | GGCGGA | 1 cut(s) | 645 |
| Eco130I | CCWWGG | 3 cut(s) | 140, 753, 1247 |
| Eco47I | GGWCC | 1 cut(s) | 1262 |
| Eco47III | AGCGCT | 1 cut(s) | 1216 |
| Eco57I | CTGAAG | 2 cut(s) | 624, 708 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1262 |
| EcoRII | CCWGG | 1 cut(s) | 1264 |
| EcoT14I | CCWWGG | 3 cut(s) | 140, 753, 1247 |
| EcoT22I | ATGCAT | 1 cut(s) | 984 |
| ErhI | CCWWGG | 3 cut(s) | 140, 753, 1247 |
| FaeI | CATG | 6 cut(s) | 95, 156, 320, 466, 757, 1030 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 37, 69, 825, 857, 1204, 1236 |
| FaqI | GGGAC | 3 cut(s) | 211, 983, 1247 |
| FatI | CATG | 6 cut(s) | 91, 152, 316, 462, 753, 1026 |
| Fnu4HI | GCNGC | 3 cut(s) | 455, 579, 936 |
| FokI | GGATG | 2 cut(s) | 276, 969 |
| Fsp4HI | GCNGC | 3 cut(s) | 455, 579, 936 |
| FspBI | CTAG | 5 cut(s) | 162, 264, 353, 567, 663 |
| GlaI | GCGC | 1 cut(s) | 1216 |
| GluI | GCNGC | 3 cut(s) | 455, 579, 936 |
| GsuI | CTGGAG | 1 cut(s) | 471 |
| HaeII | RGCGCY | 1 cut(s) | 1218 |
| HaeIII | GGCC | 1 cut(s) | 1227 |
| HapII | CCGG | 1 cut(s) | 699 |
| HhaI | GCGC | 1 cut(s) | 1217 |
| Hin1II | CATG | 6 cut(s) | 95, 156, 320, 466, 757, 1030 |
| Hin6I | GCGC | 1 cut(s) | 1215 |
| HinP1I | GCGC | 1 cut(s) | 1215 |
| HincII | GTYRAC | 1 cut(s) | 517 |
| HindII | GTYRAC | 1 cut(s) | 517 |
| HindIII | AAGCTT | 1 cut(s) | 872 |
| HinfI | GANTC | 7 cut(s) | 149, 331, 356, 518, 599, 878, 1163 |
| HpaII | CCGG | 1 cut(s) | 699 |
| HphI | GGTGA | 1 cut(s) | 873 |
| Hpy166II | GTNNAC | 1 cut(s) | 517 |
| Hpy188I | TCNGA | 5 cut(s) | 148, 445, 538, 643, 766 |
| Hpy188III | TCNNGA | 8 cut(s) | 111, 252, 353, 468, 603, 612, 683, 1173 |
| Hpy8I | GTNNAC | 1 cut(s) | 517 |
| HpyAV | CCTTC | 2 cut(s) | 321, 1123 |
| HpyCH4III | ACNGT | 3 cut(s) | 304, 791, 918 |
| HpyCH4IV | ACGT | 2 cut(s) | 217, 1150 |
| HpyCH4V | TGCA | 9 cut(s) | 545, 775, 787, 907, 958, 982, 1032, 1070, 1075 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 578, 1067, 1204 |
| HpyF3I | CTNAG | 6 cut(s) | 333, 442, 535, 669, 765, 816 |
| HpySE526I | ACGT | 2 cut(s) | 217, 1150 |
| Hsp92II | CATG | 6 cut(s) | 95, 156, 320, 466, 757, 1030 |
| HspAI | GCGC | 1 cut(s) | 1215 |
| KpnI | GGTACC | 1 cut(s) | 283 |
| Kzo9I | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| LmnI | GCTCC | 3 cut(s) | 50, 928, 1222 |
| Lsp1109I | GCAGC | 2 cut(s) | 466, 565 |
| LweI | GCATC | 3 cut(s) | 160, 466, 991 |
| MaeI | CTAG | 5 cut(s) | 162, 264, 353, 567, 663 |
| MaeII | ACGT | 2 cut(s) | 217, 1150 |
| MaeIII | GTNAC | 3 cut(s) | 187, 204, 1255 |
| MalI | GATC | 9 cut(s) | 20, 99, 115, 127, 556, 637, 750, 1177, 1288 |
| MbiI | CCGCTC | 1 cut(s) | 935 |
| MboI | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| MboII | GAAGA | 6 cut(s) | 267, 299, 407, 630, 645, 1014 |
| MflI | RGATCY | 5 cut(s) | 113, 125, 554, 635, 1175 |
| MluCI | AATT | 8 cut(s) | 106, 196, 504, 796, 902, 1034, 1038, 1098 |
| MlyI | GAGTC | 3 cut(s) | 325, 512, 1172 |
| MmeI | TCCRAC | 1 cut(s) | 391 |
| Mph1103I | ATGCAT | 1 cut(s) | 984 |
| MroXI | GAANNNNTTC | 1 cut(s) | 637 |
| MseI | TTAA | 8 cut(s) | 62, 177, 210, 527, 870, 1037, 1052, 1085 |
| MslI | CAYNNNNRTG | 5 cut(s) | 64, 321, 758, 1010, 1075 |
| MspA1I | CMGCKG | 1 cut(s) | 596 |
| MspCI | CTTAAG | 1 cut(s) | 1051 |
| MspI | CCGG | 1 cut(s) | 699 |
| MspR9I | CCNGG | 1 cut(s) | 1266 |
| MvaI | CCWGG | 1 cut(s) | 1266 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 578, 1067, 1204 |
| NcoI | CCATGG | 1 cut(s) | 753 |
| NdeII | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| NlaIII | CATG | 6 cut(s) | 95, 156, 320, 466, 757, 1030 |
| NlaIV | GGNNCC | 2 cut(s) | 115, 281 |
| NsiI | ATGCAT | 1 cut(s) | 984 |
| NspI | RCATGY | 1 cut(s) | 466 |
| NspV | TTCGAA | 1 cut(s) | 794 |
| OliI | CACNNNNGTG | 1 cut(s) | 1075 |
| PciI | ACATGT | 1 cut(s) | 462 |
| PdmI | GAANNNNTTC | 1 cut(s) | 637 |
| PfeI | GAWTC | 4 cut(s) | 149, 356, 599, 878 |
| PkrI | GCNGC | 3 cut(s) | 456, 580, 937 |
| PleI | GAGTC | 3 cut(s) | 325, 512, 1171 |
| PpsI | GAGTC | 3 cut(s) | 325, 512, 1171 |
| Ppu21I | YACGTR | 1 cut(s) | 1151 |
| PpuMI | RGGWCCY | 1 cut(s) | 1262 |
| PscI | ACATGT | 1 cut(s) | 462 |
| PshBI | ATTAAT | 1 cut(s) | 1037 |
| Psp5II | RGGWCCY | 1 cut(s) | 1262 |
| Psp6I | CCWGG | 1 cut(s) | 1264 |
| PspGI | CCWGG | 1 cut(s) | 1264 |
| PspN4I | GGNNCC | 2 cut(s) | 115, 281 |
| PspPI | GGNCC | 1 cut(s) | 1262 |
| PspPPI | RGGWCCY | 1 cut(s) | 1262 |
| PstI | CTGCAG | 1 cut(s) | 1077 |
| PstNI | CAGNNNCTG | 2 cut(s) | 578, 1265 |
| PsuI | RGATCY | 5 cut(s) | 113, 125, 554, 635, 1175 |
| PvuII | CAGCTG | 1 cut(s) | 596 |
| RsaI | GTAC | 4 cut(s) | 281, 327, 532, 915 |
| RsaNI | GTAC | 4 cut(s) | 280, 326, 531, 914 |
| RseI | CAYNNNNRTG | 5 cut(s) | 64, 321, 758, 1010, 1075 |
| SaqAI | TTAA | 8 cut(s) | 62, 177, 210, 527, 870, 1037, 1052, 1085 |
| SatI | GCNGC | 3 cut(s) | 455, 579, 936 |
| Sau3AI | GATC | 9 cut(s) | 18, 97, 113, 125, 554, 635, 748, 1175, 1286 |
| Sau96I | GGNCC | 1 cut(s) | 1262 |
| ScaI | AGTACT | 1 cut(s) | 915 |
| SchI | GAGTC | 3 cut(s) | 325, 512, 1172 |
| ScrFI | CCNGG | 1 cut(s) | 1266 |
| SfaNI | GCATC | 3 cut(s) | 160, 466, 991 |
| SfcI | CTRYAG | 3 cut(s) | 120, 474, 1073 |
| SfuI | TTCGAA | 1 cut(s) | 794 |
| SinI | GGWCC | 1 cut(s) | 1262 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 64, 321, 758, 1010, 1075 |
| SmlI | CTYRAG | 1 cut(s) | 1051 |
| SmoI | CTYRAG | 1 cut(s) | 1051 |
| Sse9I | AATT | 8 cut(s) | 106, 196, 504, 796, 902, 1034, 1038, 1098 |
| SsiI | CCGC | 2 cut(s) | 630, 935 |
| SspI | AATATT | 2 cut(s) | 736, 1046 |
| SspMI | CTAG | 5 cut(s) | 162, 264, 353, 567, 663 |
| StyD4I | CCNGG | 1 cut(s) | 1264 |
| StyI | CCWWGG | 3 cut(s) | 140, 753, 1247 |
| TaaI | ACNGT | 3 cut(s) | 304, 791, 918 |
| TaiI | ACGT | 2 cut(s) | 220, 1153 |
| TaqI | TCGA | 2 cut(s) | 794, 1273 |
| TasI | AATT | 8 cut(s) | 106, 196, 504, 796, 902, 1034, 1038, 1098 |
| TatI | WGTACW | 1 cut(s) | 913 |
| TauI | GCSGC | 1 cut(s) | 938 |
| TfiI | GAWTC | 4 cut(s) | 149, 356, 599, 878 |
| Tru1I | TTAA | 8 cut(s) | 62, 177, 210, 527, 870, 1037, 1052, 1085 |
| Tru9I | TTAA | 8 cut(s) | 62, 177, 210, 527, 870, 1037, 1052, 1085 |
| TscAI | CASTG | 5 cut(s) | 397, 1077, 1082, 1123, 1209 |
| TseI | GCWGC | 2 cut(s) | 454, 578 |
| TspDTI | ATGAA | 4 cut(s) | 355, 985, 1110, 1137 |
| TspGWI | ACGGA | 3 cut(s) | 211, 343, 914 |
| TspRI | CASTG | 5 cut(s) | 397, 1077, 1082, 1123, 1209 |
| Vha464I | CTTAAG | 1 cut(s) | 1051 |
| VpaK11BI | GGWCC | 1 cut(s) | 1262 |
| VspI | ATTAAT | 1 cut(s) | 1037 |
| XapI | RAATTY | 3 cut(s) | 106, 796, 1098 |
| XbaI | TCTAGA | 1 cut(s) | 352 |
| XceI | RCATGY | 1 cut(s) | 466 |
| XmnI | GAANNNNTTC | 1 cut(s) | 637 |
| XspI | CTAG | 5 cut(s) | 162, 264, 353, 567, 663 |
| ZrmI | AGTACT | 1 cut(s) | 915 |
| Zsp2I | ATGCAT | 1 cut(s) | 984 |