Lys-63-specific deubiquitinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80210 AT1G80210 AT3G06820 AT3G06820 AT3G06820 |
| fragaria_vesca | FvH4_6g30340 FvH4_6g30340 FvH4_6g30340 |
| malus_domestica | MD09G1221000.v1.1 MD17G1204400.v1.1 |
| prunus_persica | Prupe.3G079900_v2.0.a1 Prupe.3G079900_v2.0.a1 Prupe.3G079900_v2.0.a1 |
| pyrus_communis | pycom1094g00120 pycom17g20830 |
| rosa_chinensis | RchiOBHm_Chr2g0136621 |
| rosa_laevigata | RLG00000019542 |
| rosa_multiflora | Rmu_sc0006440.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00108160 |
| rosa_rugosa | Rorug02G0332100 |
| rosa_samantha | Rh2AG382900 Rh2BG389500 Rh2CG369200 Rh2DG406300 |
| rosa_wichuraiana | Rw2G031300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 597 |
| AccBSI | CCGCTC | 1 cut(s) | 590 |
| AciI | CCGC | 1 cut(s) | 590 |
| AclWI | GGATC | 2 cut(s) | 398, 838 |
| AcsI | RAATTY | 1 cut(s) | 823 |
| AcuI | CTGAAG | 1 cut(s) | 285 |
| AfaI | GTAC | 5 cut(s) | 153, 193, 570, 671, 858 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 108 |
| AflIII | ACRYGT | 1 cut(s) | 123 |
| AgsI | TTSAA | 3 cut(s) | 179, 264, 381 |
| AjnI | CCWGG | 2 cut(s) | 306, 479 |
| AluBI | AGCT | 4 cut(s) | 257, 529, 905, 932 |
| AluI | AGCT | 4 cut(s) | 257, 529, 905, 932 |
| Alw21I | GWGCWC | 3 cut(s) | 727, 771, 874 |
| Alw26I | GTCTC | 2 cut(s) | 794, 812 |
| Alw44I | GTGCAC | 1 cut(s) | 723 |
| AlwI | GGATC | 2 cut(s) | 398, 838 |
| ApaLI | GTGCAC | 1 cut(s) | 723 |
| ApoI | RAATTY | 1 cut(s) | 823 |
| AseI | ATTAAT | 1 cut(s) | 692 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 958 |
| AsuHPI | GGTGA | 3 cut(s) | 528, 544, 763 |
| BaeGI | GKGCMC | 1 cut(s) | 727 |
| BanII | GRGCYC | 1 cut(s) | 36 |
| BauI | CACGAG | 1 cut(s) | 521 |
| BbsI | GAAGAC | 2 cut(s) | 291, 669 |
| Bbv12I | GWGCWC | 3 cut(s) | 727, 771, 874 |
| BccI | CCATC | 2 cut(s) | 101, 620 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 676, 710 |
| BciT130I | CCWGG | 2 cut(s) | 308, 481 |
| BcoDI | GTCTC | 2 cut(s) | 794, 812 |
| BfaI | CTAG | 3 cut(s) | 14, 228, 344 |
| BisI | GCNGC | 1 cut(s) | 591 |
| BlsI | GCNGC | 1 cut(s) | 592 |
| BmcAI | AGTACT | 1 cut(s) | 570 |
| Bme1390I | CCNGG | 2 cut(s) | 308, 481 |
| BmiI | GGNNCC | 1 cut(s) | 950 |
| BmrFI | CCNGG | 2 cut(s) | 308, 481 |
| BmsI | GCATC | 3 cut(s) | 127, 322, 646 |
| BpiI | GAAGAC | 2 cut(s) | 291, 669 |
| Bsa29I | ATCGAT | 1 cut(s) | 218 |
| BsaBI | GATNNNNATC | 1 cut(s) | 402 |
| BsaJI | CCNNGG | 4 cut(s) | 102, 307, 408, 862 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 108 |
| Bse1I | ACTGG | 3 cut(s) | 164, 673, 842 |
| Bse3DI | GCAATG | 3 cut(s) | 87, 444, 737 |
| Bse8I | GATNNNNATC | 1 cut(s) | 402 |
| BseBI | CCWGG | 2 cut(s) | 308, 481 |
| BseCI | ATCGAT | 1 cut(s) | 218 |
| BseDI | CCNNGG | 4 cut(s) | 102, 307, 408, 862 |
| BseGI | GGATG | 3 cut(s) | 112, 631, 637 |
| BseJI | GATNNNNATC | 1 cut(s) | 402 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 108 |
| BseMI | GCAATG | 3 cut(s) | 87, 444, 737 |
| BseMII | CTCAG | 4 cut(s) | 210, 462, 789, 807 |
| BseNI | ACTGG | 3 cut(s) | 164, 673, 842 |
| BseRI | GAGGAG | 2 cut(s) | 596, 825 |
| BseSI | GKGCMC | 1 cut(s) | 727 |
| BshVI | ATCGAT | 1 cut(s) | 218 |
| BsiHKAI | GWGCWC | 3 cut(s) | 727, 771, 874 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 108 |
| BsmAI | GTCTC | 2 cut(s) | 794, 812 |
| BsmBI | CGTCTC | 1 cut(s) | 794 |
| Bsp1286I | GDGCHC | 4 cut(s) | 36, 727, 771, 874 |
| Bsp1407I | TGTACA | 1 cut(s) | 151 |
| Bsp143I | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| Bsp19I | CCATGG | 1 cut(s) | 408 |
| BspACI | CCGC | 1 cut(s) | 590 |
| BspCNI | CTCAG | 4 cut(s) | 209, 463, 790, 808 |
| BspDI | ATCGAT | 1 cut(s) | 218 |
| BspLI | GGNNCC | 1 cut(s) | 950 |
| BspPI | GGATC | 2 cut(s) | 398, 838 |
| BsrBI | CCGCTC | 1 cut(s) | 590 |
| BsrDI | GCAATG | 3 cut(s) | 87, 444, 737 |
| BsrGI | TGTACA | 1 cut(s) | 151 |
| BsrI | ACTGG | 3 cut(s) | 164, 673, 842 |
| BssECI | CCNNGG | 4 cut(s) | 102, 307, 408, 862 |
| BssMI | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| BssSI | CACGAG | 1 cut(s) | 521 |
| BssT1I | CCWWGG | 1 cut(s) | 408 |
| Bst2BI | CACGAG | 1 cut(s) | 521 |
| Bst2UI | CCWGG | 2 cut(s) | 308, 481 |
| Bst4CI | ACNGT | 2 cut(s) | 446, 573 |
| Bst6I | CTCTTC | 3 cut(s) | 343, 501, 573 |
| BstAUI | TGTACA | 1 cut(s) | 151 |
| BstC8I | GCNNGC | 1 cut(s) | 588 |
| BstDEI | CTNAG | 4 cut(s) | 196, 471, 798, 816 |
| BstDSI | CCRYGG | 2 cut(s) | 408, 862 |
| BstF5I | GGATG | 3 cut(s) | 112, 631, 637 |
| BstKTI | GATC | 5 cut(s) | 218, 222, 406, 778, 833 |
| BstMAI | GTCTC | 2 cut(s) | 794, 812 |
| BstMBI | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 476, 722, 948 |
| BstNI | CCWGG | 2 cut(s) | 308, 481 |
| BstNSI | RCATGY | 1 cut(s) | 127 |
| BstSCI | CCNGG | 2 cut(s) | 306, 479 |
| BstSLI | GKGCMC | 1 cut(s) | 727 |
| BstV2I | GAAGAC | 2 cut(s) | 291, 669 |
| BstX2I | RGATCY | 2 cut(s) | 403, 830 |
| BstYI | RGATCY | 2 cut(s) | 403, 830 |
| Bsu15I | ATCGAT | 1 cut(s) | 218 |
| BsuTUI | ATCGAT | 1 cut(s) | 218 |
| BtgI | CCRYGG | 2 cut(s) | 408, 862 |
| BtsCI | GGATG | 3 cut(s) | 112, 631, 637 |
| BtsI | GCAGTG | 2 cut(s) | 725, 771 |
| BtsIMutI | CAGTG | 3 cut(s) | 725, 771, 922 |
| Cac8I | GCNNGC | 1 cut(s) | 588 |
| ClaI | ATCGAT | 1 cut(s) | 218 |
| CseI | GACGC | 1 cut(s) | 811 |
| Csp6I | GTAC | 5 cut(s) | 152, 192, 569, 670, 857 |
| CviAII | CATG | 3 cut(s) | 124, 409, 682 |
| CviJI | RGCY | 9 cut(s) | 34, 257, 313, 529, 593, 815, 905, 932, 951 |
| CviKI_1 | RGCY | 9 cut(s) | 34, 257, 313, 529, 593, 815, 905, 932, 951 |
| CviQI | GTAC | 5 cut(s) | 152, 192, 569, 670, 857 |
| DdeI | CTNAG | 4 cut(s) | 196, 471, 798, 816 |
| DpnI | GATC | 5 cut(s) | 217, 221, 405, 777, 832 |
| DpnII | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| Eam1104I | CTCTTC | 3 cut(s) | 343, 501, 573 |
| EarI | CTCTTC | 3 cut(s) | 343, 501, 573 |
| Eco130I | CCWWGG | 1 cut(s) | 408 |
| Eco24I | GRGCYC | 1 cut(s) | 36 |
| Eco57I | CTGAAG | 1 cut(s) | 285 |
| EcoRII | CCWGG | 2 cut(s) | 306, 479 |
| EcoT14I | CCWWGG | 1 cut(s) | 408 |
| EcoT38I | GRGCYC | 1 cut(s) | 36 |
| ErhI | CCWWGG | 1 cut(s) | 408 |
| Esp3I | CGTCTC | 1 cut(s) | 794 |
| FaeI | CATG | 3 cut(s) | 127, 412, 685 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 480, 512 |
| FatI | CATG | 3 cut(s) | 123, 408, 681 |
| Fnu4HI | GCNGC | 1 cut(s) | 591 |
| FokI | GGATG | 3 cut(s) | 119, 624, 638 |
| FriOI | GRGCYC | 1 cut(s) | 36 |
| Fsp4HI | GCNGC | 1 cut(s) | 591 |
| FspBI | CTAG | 3 cut(s) | 14, 228, 344 |
| GluI | GCNGC | 1 cut(s) | 591 |
| HgaI | GACGC | 1 cut(s) | 811 |
| Hin1II | CATG | 3 cut(s) | 127, 412, 685 |
| HinfI | GANTC | 8 cut(s) | 17, 78, 179, 238, 260, 709, 908, 925 |
| HphI | GGTGA | 3 cut(s) | 528, 544, 763 |
| Hpy166II | GTNNAC | 1 cut(s) | 725 |
| Hpy188I | TCNGA | 4 cut(s) | 106, 199, 304, 421 |
| Hpy188III | TCNNGA | 7 cut(s) | 14, 129, 242, 264, 273, 523, 828 |
| Hpy8I | GTNNAC | 1 cut(s) | 725 |
| HpyCH4III | ACNGT | 2 cut(s) | 446, 573 |
| HpyCH4IV | ACGT | 1 cut(s) | 501 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 476, 722, 948 |
| HpyF3I | CTNAG | 4 cut(s) | 196, 471, 798, 816 |
| HpySE526I | ACGT | 1 cut(s) | 501 |
| Hsp92II | CATG | 3 cut(s) | 127, 412, 685 |
| Kzo9I | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| LmnI | GCTCC | 3 cut(s) | 583, 877, 948 |
| LweI | GCATC | 3 cut(s) | 127, 322, 646 |
| MaeI | CTAG | 3 cut(s) | 14, 228, 344 |
| MaeII | ACGT | 1 cut(s) | 501 |
| MaeIII | GTNAC | 1 cut(s) | 881 |
| MalI | GATC | 5 cut(s) | 217, 221, 405, 777, 832 |
| MbiI | CCGCTC | 1 cut(s) | 590 |
| MboI | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| MboII | GAAGA | 7 cut(s) | 68, 291, 360, 488, 590, 669, 796 |
| MflI | RGATCY | 2 cut(s) | 403, 830 |
| MhlI | GDGCHC | 4 cut(s) | 36, 727, 771, 874 |
| MluCI | AATT | 4 cut(s) | 532, 557, 689, 823 |
| MlyI | GAGTC | 3 cut(s) | 247, 718, 934 |
| MmeI | TCCRAC | 1 cut(s) | 334 |
| MroXI | GAANNNNTTC | 1 cut(s) | 958 |
| MseI | TTAA | 5 cut(s) | 188, 224, 542, 692, 740 |
| MslI | CAYNNNNRTG | 3 cut(s) | 413, 665, 730 |
| MspA1I | CMGCKG | 3 cut(s) | 257, 905, 932 |
| MspR9I | CCNGG | 2 cut(s) | 308, 481 |
| MvaI | CCWGG | 2 cut(s) | 308, 481 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 476, 722, 948 |
| NcoI | CCATGG | 1 cut(s) | 408 |
| NdeII | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| NlaIII | CATG | 3 cut(s) | 127, 412, 685 |
| NlaIV | GGNNCC | 1 cut(s) | 950 |
| NmuCI | GTSAC | 1 cut(s) | 881 |
| NspI | RCATGY | 1 cut(s) | 127 |
| PciI | ACATGT | 1 cut(s) | 123 |
| PdmI | GAANNNNTTC | 1 cut(s) | 958 |
| PfeI | GAWTC | 5 cut(s) | 17, 78, 179, 260, 908 |
| PkrI | GCNGC | 1 cut(s) | 592 |
| PleI | GAGTC | 3 cut(s) | 246, 717, 933 |
| PpsI | GAGTC | 3 cut(s) | 246, 717, 933 |
| PscI | ACATGT | 1 cut(s) | 123 |
| PshBI | ATTAAT | 1 cut(s) | 692 |
| PsiI | TTATAA | 1 cut(s) | 597 |
| Psp6I | CCWGG | 2 cut(s) | 306, 479 |
| PspGI | CCWGG | 2 cut(s) | 306, 479 |
| PspN4I | GGNNCC | 1 cut(s) | 950 |
| PsuI | RGATCY | 2 cut(s) | 403, 830 |
| PvuII | CAGCTG | 3 cut(s) | 257, 905, 932 |
| RsaI | GTAC | 5 cut(s) | 153, 193, 570, 671, 858 |
| RsaNI | GTAC | 5 cut(s) | 152, 192, 569, 670, 857 |
| RseI | CAYNNNNRTG | 3 cut(s) | 413, 665, 730 |
| SaqAI | TTAA | 5 cut(s) | 188, 224, 542, 692, 740 |
| SatI | GCNGC | 1 cut(s) | 591 |
| Sau3AI | GATC | 5 cut(s) | 215, 219, 403, 775, 830 |
| ScaI | AGTACT | 1 cut(s) | 570 |
| SchI | GAGTC | 3 cut(s) | 247, 718, 934 |
| ScrFI | CCNGG | 2 cut(s) | 308, 481 |
| SduI | GDGCHC | 4 cut(s) | 36, 727, 771, 874 |
| SfaNI | GCATC | 3 cut(s) | 127, 322, 646 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 413, 665, 730 |
| Sse9I | AATT | 4 cut(s) | 532, 557, 689, 823 |
| SsiI | CCGC | 1 cut(s) | 590 |
| SspI | AATATT | 1 cut(s) | 701 |
| SspMI | CTAG | 3 cut(s) | 14, 228, 344 |
| StyD4I | CCNGG | 2 cut(s) | 306, 479 |
| StyI | CCWWGG | 1 cut(s) | 408 |
| TaaI | ACNGT | 2 cut(s) | 446, 573 |
| TaiI | ACGT | 1 cut(s) | 504 |
| TaqI | TCGA | 2 cut(s) | 218, 696 |
| TasI | AATT | 4 cut(s) | 532, 557, 689, 823 |
| TatI | WGTACW | 3 cut(s) | 151, 568, 856 |
| TauI | GCSGC | 1 cut(s) | 593 |
| TfiI | GAWTC | 5 cut(s) | 17, 78, 179, 260, 908 |
| Tru1I | TTAA | 5 cut(s) | 188, 224, 542, 692, 740 |
| Tru9I | TTAA | 5 cut(s) | 188, 224, 542, 692, 740 |
| TscAI | CASTG | 3 cut(s) | 732, 771, 922 |
| TseFI | GTSAC | 1 cut(s) | 881 |
| Tsp45I | GTSAC | 1 cut(s) | 881 |
| TspDTI | ATGAA | 4 cut(s) | 591, 640, 765, 837 |
| TspGWI | ACGGA | 2 cut(s) | 851, 864 |
| TspRI | CASTG | 3 cut(s) | 732, 771, 922 |
| VneI | GTGCAC | 1 cut(s) | 723 |
| VspI | ATTAAT | 1 cut(s) | 692 |
| XapI | RAATTY | 1 cut(s) | 823 |
| XbaI | TCTAGA | 1 cut(s) | 13 |
| XceI | RCATGY | 1 cut(s) | 127 |
| XmnI | GAANNNNTTC | 1 cut(s) | 958 |
| XspI | CTAG | 3 cut(s) | 14, 228, 344 |
| ZrmI | AGTACT | 1 cut(s) | 570 |