Prupe.1G135700_v2.0.a1

BEST Arabidopsis thaliana protein match is

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
10684175 .. 10687059
2885 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G135700.1

Sequence Viewer

Length: 1692 bp
ATGGCGGGTGCGCATTGCGCCACCTTCCCTTTCCTCACGCCTCCAATCTGCTCCGCCGCCAAACCAACCAAACCCATCCTATCAGCCTCTATTGCCCTAGCATCAAAGCCCACACGACGGAAAAACTATCTGCGCCCGAAAATCCTCAAAACCCTAGCTGAACCCGACCCGCCACCCAGAACCCCTCTCCTTCCCGAACAACCCCTAACAAGCCCCGTAATTCCCATTGAGTCCCCCGTAACCCAATATGAAAACGACTCTAATCTCGAGCGTAGCTCCGACCAAGGCGACGTCGTTGCCGGAGAAGTCAATAAGGTCGAGGAATTCAGCGTATCTGAGACGACACCGGAGTATAATGGCATTGTTGGTAAATTATCTGCGAAGTCTGTCCTTAAATTTGGGGCGTATTTGGTTGGGGCTTATTTGTTTCAGGCGTTTTTTACTGTTTGGCTACTGGGAAATGACAATCCTGATGAGGAAAATAGGAAATCCAAGAGTTCAGGTTTAAGTTTATCCAAAGGGAAAGTTTTGAATACAAATGTTGGGTCTGGATTGAGCAATGTGGTTTATTTGGATGAGCTCCAGTTGGATGAGAAAATAGAAGAAATTAGAGCAATGGCAAGGGAAGCGCGAAAGCAAGAGAAAAAGGAAGGGAAGGGAAATGTTGGTGACGAAGATGATGTTATTGATGAAAGTTCGATGCCAAGGAATAGAATCGGTATTGAAAAAGAAGTCGGGGAGCGGTTGCTTAAGTTGCAGAATAGGTTGAATTCTAAAAGGGAGAAGTTACAGGGTCCATATGTGAAAGACTTTGGAAAGCATGAGAATAGTGAAGATGAGAATTTGAAAGAGGGGGAAGGGGGATTGATGTTTAAGAAAAAGCTTAAATTTAAGGCTGAGGCGAAAAGAAGTCCCAAGGGATTTGGAGGTTTGGAAGAGCATGATGAAAACCGGCCAGAGTTGGATTTCGAACAAAGTGTTTCTGAGACTTTGGAGGAAGAACCCAAATTGTTGCAAGATGATGGGAACCATTTGGACAAAGGAACTGGAAAAATGGATAGTGGAAAGGACATAGGAGTTGGAACTATTGAACCAAAGAATGGTACCGTCCAGAGGACAAGACGAGGGAGGTCATCTGAAGGAGTAAAGTCAAAAAAATCAAGAGAGTTGGGGAAGAAAAAGTCTCGCTTGAAGAAAGAAGTCCACGAAACTACCATAAAATCTGGTGATCATGTAAATGGCAGTTCAAGACACAAAGAAGCTGGAAAGGAACGAGTGCCTAACAAAGTCAGTGGCAATAGATCGAAGAATGAGATTGATCCATGGTGGTTGGATCTTCCTTATGTTTTGGTTATTCTGATGCGGAGAGGTTCTGGTAGTGAGGGGCAAGGAGGACTTTATACTTTAAAGTTCAGTTCTCAGCCCCAAAACCAGAGAGATTCTTCATATACTGTTGCTTTCGAGGACCGTGCTGATGCCAATAACTTCTGTTTCCTATTGGAGTCTCTTTTTGAAGATCTGGGTGATTTCAGTGCTGATATTGCTCCTTTGCCAAACAAAGAACTTCGTGAAGCAATAAAATCAGATAACATGAAGGTAATATTTGTGAAAAAGGGGCAGCTTCCGCTGTATGCCGGGCAACCTTTTGAAGAAGTTGAGATGGCTTTGCGCTCTTTGGTTGAACATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

564

Amino Acids

62.61

Weight (kDa)

6.54

Isoelectric Point (pI)

44.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013202)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 294
Acc16I TGCGCA 1 cut(s) 12
Acc65I GGTACC 1 cut(s) 1103
AccB1I GGYRCC 1 cut(s) 1103
AccB7I CCANNNNNTGG 1 cut(s) 1100
AccBSI CCGCTC 1 cut(s) 742
AccII CGCG 1 cut(s) 631
AciI CCGC 7 cut(s) 5, 54, 57, 170, 742, 1363, 1625
AclWI GGATC 2 cut(s) 1313, 1341
AcoI YGGCCR 1 cut(s) 953
AcsI RAATTY 5 cut(s) 323, 395, 769, 841, 887
AcuI CTGAAG 1 cut(s) 1158
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 1 cut(s) 1105
AfiI CCNNNNNNNGG 3 cut(s) 117, 1100, 1113
AflII CTTAAG 1 cut(s) 749
AluBI AGCT 6 cut(s) 158, 276, 580, 883, 1262, 1621
AluI AGCT 6 cut(s) 158, 276, 580, 883, 1262, 1621
Alw21I GWGCWC 1 cut(s) 582
Alw26I GTCTC 4 cut(s) 332, 980, 1188, 1509
AlwI GGATC 2 cut(s) 1313, 1341
Ama87I CYCGRG 1 cut(s) 266
AoxI GGCC 1 cut(s) 953
ApeKI GCWGC 1 cut(s) 1618
ApoI RAATTY 5 cut(s) 323, 395, 769, 841, 887
ArsI GACNNNNNNTTYG 2 cut(s) 530, 562
Asp718I GGTACC 1 cut(s) 1103
AspLEI GCGC 5 cut(s) 13, 20, 135, 631, 1671
AspS9I GGNCC 2 cut(s) 794, 1465
AsuC2I CCSGG 1 cut(s) 1636
AsuHPI GGTGA 3 cut(s) 680, 1238, 1535
AsuII TTCGAA 1 cut(s) 969
AvaI CYCGRG 1 cut(s) 266
AvaII GGWCC 2 cut(s) 794, 1465
BanI GGYRCC 1 cut(s) 1103
BanII GRGCYC 1 cut(s) 582
Bbv12I GWGCWC 1 cut(s) 582
BbvCI CCTCAGC 1 cut(s) 897
BbvI GCAGC 1 cut(s) 1630
BccI CCATC 3 cut(s) 83, 1016, 1654
BcgI CGANNNNNNTGC 4 cut(s) 278, 312, 1451, 1485
BclI TGATCA 1 cut(s) 1228
BcnI CCSGG 1 cut(s) 1636
BcoDI GTCTC 4 cut(s) 332, 980, 1188, 1509
BfaI CTAG 2 cut(s) 98, 155
BfrI CTTAAG 1 cut(s) 749
BglII AGATCT 1 cut(s) 1516
BisI GCNGC 2 cut(s) 57, 1619
BlsI GCNGC 2 cut(s) 58, 1620
Bme1390I CCNGG 1 cut(s) 1636
Bme18I GGWCC 2 cut(s) 794, 1465
BmeT110I CYCGRG 1 cut(s) 266
BmgT120I GGNCC 2 cut(s) 794, 1465
BmiI GGNNCC 3 cut(s) 795, 1028, 1105
BmrFI CCNGG 1 cut(s) 1636
BmrI ACTGGG 1 cut(s) 464
BmsI GCATC 4 cut(s) 110, 690, 1350, 1465
BmuI ACTGGG 1 cut(s) 464
BplI GAGNNNNNCTC 2 cut(s) 260, 292
BpmI CTGGAG 1 cut(s) 566
Bpu10I CCTNAGC 1 cut(s) 897
Bpu14I TTCGAA 1 cut(s) 969
BpuMI CCSGG 1 cut(s) 1636
BsaHI GRCGYC 1 cut(s) 291
BsaJI CCNNGG 4 cut(s) 283, 704, 915, 1322
BsaWI WCCGGW 1 cut(s) 346
Bsc4I CCNNNNNNNGG 3 cut(s) 117, 1100, 1113
Bse118I RCCGGY 1 cut(s) 951
Bse1I ACTGG 3 cut(s) 459, 583, 1051
Bse3DI GCAATG 3 cut(s) 13, 565, 621
BseDI CCNNGG 4 cut(s) 283, 704, 915, 1322
BseGI GGATG 3 cut(s) 75, 580, 595
BseLI CCNNNNNNNGG 3 cut(s) 117, 1100, 1113
BseMI GCAATG 3 cut(s) 13, 565, 621
BseMII CTCAG 4 cut(s) 327, 888, 975, 1433
BseNI ACTGG 3 cut(s) 459, 583, 1051
BseXI GCAGC 1 cut(s) 1630
Bsh1236I CGCG 1 cut(s) 631
BshFI GGCC 1 cut(s) 955
BshNI GGYRCC 1 cut(s) 1103
BsiHKAI GWGCWC 1 cut(s) 582
BsiHKCI CYCGRG 1 cut(s) 266
BsiSI CCGG 4 cut(s) 300, 347, 952, 1635
BslFI GGGAC 2 cut(s) 217, 897
BslI CCNNNNNNNGG 3 cut(s) 117, 1100, 1113
BsmAI GTCTC 4 cut(s) 332, 980, 1188, 1509
BsmBI CGTCTC 1 cut(s) 332
BsmFI GGGAC 2 cut(s) 217, 897
BsnI GGCC 1 cut(s) 955
BsoBI CYCGRG 1 cut(s) 266
Bsp119I TTCGAA 1 cut(s) 969
Bsp1286I GDGCHC 1 cut(s) 582
Bsp143I GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
Bsp19I CCATGG 1 cut(s) 1322
BspACI CCGC 7 cut(s) 5, 54, 57, 170, 742, 1363, 1625
BspANI GGCC 1 cut(s) 955
BspCNI CTCAG 4 cut(s) 328, 889, 976, 1432
BspFNI CGCG 1 cut(s) 631
BspLI GGNNCC 3 cut(s) 795, 1028, 1105
BspPI GGATC 2 cut(s) 1313, 1341
BspQI GCTCTTC 1 cut(s) 930
BspT104I TTCGAA 1 cut(s) 969
BspT107I GGYRCC 1 cut(s) 1103
BspTI CTTAAG 1 cut(s) 749
BsrBI CCGCTC 1 cut(s) 742
BsrDI GCAATG 3 cut(s) 13, 565, 621
BsrFI RCCGGY 1 cut(s) 951
BsrI ACTGG 3 cut(s) 459, 583, 1051
BssAI RCCGGY 1 cut(s) 951
BssECI CCNNGG 4 cut(s) 283, 704, 915, 1322
BssMI GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 4 cut(s) 283, 704, 915, 1322
Bst4CI ACNGT 4 cut(s) 445, 1108, 1453, 1469
Bst6I CTCTTC 1 cut(s) 930
BstACI GRCGYC 1 cut(s) 291
BstAFI CTTAAG 1 cut(s) 749
BstBI TTCGAA 1 cut(s) 969
BstDEI CTNAG 4 cut(s) 336, 897, 984, 1419
BstDSI CCRYGG 1 cut(s) 1322
BstF5I GGATG 3 cut(s) 75, 580, 595
BstFNI CGCG 1 cut(s) 631
BstHHI GCGC 5 cut(s) 13, 20, 135, 631, 1671
BstKTI GATC 5 cut(s) 1231, 1304, 1321, 1336, 1519
BstMAI GTCTC 4 cut(s) 332, 980, 1188, 1509
BstMBI GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
BstMWI GCNNNNNNNGC 6 cut(s) 17, 92, 626, 754, 1541, 1624
BstSCI CCNGG 1 cut(s) 1634
BstUI CGCG 1 cut(s) 631
BstV1I GCAGC 1 cut(s) 1630
BstX2I RGATCY 2 cut(s) 1333, 1516
BstYI RGATCY 2 cut(s) 1333, 1516
BsuRI GGCC 1 cut(s) 955
BtgI CCRYGG 1 cut(s) 1322
BtsCI GGATG 3 cut(s) 75, 580, 595
BtsIMutI CAGTG 2 cut(s) 1297, 1537
CfoI GCGC 5 cut(s) 13, 20, 135, 631, 1671
Cfr10I RCCGGY 1 cut(s) 951
Cfr13I GGNCC 2 cut(s) 794, 1465
Csp6I GTAC 1 cut(s) 1104
CspCI CAANNNNNGTGG 2 cut(s) 1273, 1308
CviAII CATG 6 cut(s) 821, 941, 1232, 1323, 1591, 1685
CviQI GTAC 1 cut(s) 1104
DdeI CTNAG 4 cut(s) 336, 897, 984, 1419
DpnI GATC 5 cut(s) 1230, 1303, 1320, 1335, 1518
DpnII GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
DraI TTTAAA 1 cut(s) 1407
EaeI YGGCCR 1 cut(s) 953
Eam1104I CTCTTC 1 cut(s) 930
EarI CTCTTC 1 cut(s) 930
EciI GGCGGA 1 cut(s) 43
Ecl136II GAGCTC 1 cut(s) 580
Eco130I CCWWGG 4 cut(s) 283, 704, 915, 1322
Eco24I GRGCYC 1 cut(s) 582
Eco47I GGWCC 2 cut(s) 794, 1465
Eco53kI GAGCTC 1 cut(s) 580
Eco57I CTGAAG 1 cut(s) 1158
Eco88I CYCGRG 1 cut(s) 266
EcoICRI GAGCTC 1 cut(s) 580
EcoRI GAATTC 2 cut(s) 323, 769
EcoT14I CCWWGG 4 cut(s) 283, 704, 915, 1322
EcoT38I GRGCYC 1 cut(s) 582
ErhI CCWWGG 4 cut(s) 283, 704, 915, 1322
Esp3I CGTCTC 1 cut(s) 332
FaeI CATG 6 cut(s) 824, 944, 1235, 1326, 1594, 1688
FalI AAGNNNNNCTT 4 cut(s) 1172, 1204, 1380, 1412
FaqI GGGAC 2 cut(s) 217, 897
FatI CATG 6 cut(s) 820, 940, 1231, 1322, 1590, 1684
FauI CCCGC 1 cut(s) 177
FauNDI CATATG 1 cut(s) 799
FbaI TGATCA 1 cut(s) 1228
Fnu4HI GCNGC 2 cut(s) 57, 1619
FokI GGATG 3 cut(s) 62, 587, 602
FriOI GRGCYC 1 cut(s) 582
Fsp4HI GCNGC 2 cut(s) 57, 1619
FspAI RTGCGCAY 1 cut(s) 12
FspBI CTAG 2 cut(s) 98, 155
FspI TGCGCA 1 cut(s) 12
GlaI GCGC 5 cut(s) 12, 19, 134, 630, 1670
GluI GCNGC 2 cut(s) 57, 1619
GsuI CTGGAG 1 cut(s) 566
HaeIII GGCC 1 cut(s) 955
HapII CCGG 4 cut(s) 300, 347, 952, 1635
HhaI GCGC 5 cut(s) 13, 20, 135, 631, 1671
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 6 cut(s) 824, 944, 1235, 1326, 1594, 1688
Hin6I GCGC 5 cut(s) 11, 18, 133, 629, 1669
HinP1I GCGC 5 cut(s) 11, 18, 133, 629, 1669
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 5 cut(s) 230, 257, 714, 1439, 1502
HpaII CCGG 4 cut(s) 300, 347, 952, 1635
HphI GGTGA 3 cut(s) 680, 1238, 1535
Hpy166II GTNNAC 1 cut(s) 1204
Hpy188I TCNGA 6 cut(s) 280, 337, 985, 1138, 1359, 1585
Hpy188III TCNNGA 8 cut(s) 194, 266, 470, 549, 1111, 1161, 1248, 1568
Hpy8I GTNNAC 1 cut(s) 1204
Hpy99I CGWCG 3 cut(s) 120, 293, 296
HpyAV CCTTC 7 cut(s) 34, 200, 644, 649, 851, 1133, 1588
HpyCH4III ACNGT 4 cut(s) 445, 1108, 1453, 1469
HpyCH4IV ACGT 1 cut(s) 291
HpyCH4V TGCA 2 cut(s) 757, 1015
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 92, 626, 754, 1541, 1624
HpyF3I CTNAG 4 cut(s) 336, 897, 984, 1419
HpySE526I ACGT 1 cut(s) 291
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 6 cut(s) 824, 944, 1235, 1326, 1594, 1688
HspAI GCGC 5 cut(s) 11, 18, 133, 629, 1669
KpnI GGTACC 1 cut(s) 1107
Ksp22I TGATCA 1 cut(s) 1228
Kzo9I GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
LguI GCTCTTC 1 cut(s) 930
LmnI GCTCC 5 cut(s) 56, 281, 585, 739, 1549
Lsp1109I GCAGC 1 cut(s) 1630
LweI GCATC 4 cut(s) 110, 690, 1350, 1465
MaeI CTAG 2 cut(s) 98, 155
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 3 cut(s) 238, 668, 786
MalI GATC 5 cut(s) 1230, 1303, 1320, 1335, 1518
MbiI CCGCTC 1 cut(s) 742
MboI GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
MflI RGATCY 2 cut(s) 1333, 1516
MhlI GDGCHC 1 cut(s) 582
MluCI AATT 9 cut(s) 219, 323, 371, 395, 606, 769, 841, 887, 1007
MlyI GAGTC 3 cut(s) 239, 251, 1511
MmeI TCCRAC 5 cut(s) 303, 567, 942, 1060, 1311
MseI TTAA 7 cut(s) 393, 506, 750, 873, 885, 891, 1406
MslI CAYNNNNRTG 1 cut(s) 1236
MspA1I CMGCKG 1 cut(s) 1627
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 4 cut(s) 300, 347, 952, 1635
MspR9I CCNGG 1 cut(s) 1636
MvnI CGCG 1 cut(s) 631
MwoI GCNNNNNNNGC 6 cut(s) 17, 92, 626, 754, 1541, 1624
NciI CCSGG 1 cut(s) 1636
NcoI CCATGG 1 cut(s) 1322
NdeI CATATG 1 cut(s) 799
NdeII GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
NlaIII CATG 6 cut(s) 824, 944, 1235, 1326, 1594, 1688
NlaIV GGNNCC 3 cut(s) 795, 1028, 1105
NmuCI GTSAC 1 cut(s) 668
NsbI TGCGCA 1 cut(s) 12
NspV TTCGAA 1 cut(s) 969
PaeR7I CTCGAG 1 cut(s) 266
PciSI GCTCTTC 1 cut(s) 930
PfeI GAWTC 2 cut(s) 714, 1439
PflMI CCANNNNNTGG 1 cut(s) 1100
PkrI GCNGC 2 cut(s) 58, 1620
PleI GAGTC 3 cut(s) 238, 251, 1510
PpsI GAGTC 3 cut(s) 238, 251, 1510
Psp124BI GAGCTC 1 cut(s) 582
PspN4I GGNNCC 3 cut(s) 795, 1028, 1105
PspPI GGNCC 2 cut(s) 794, 1465
PsuI RGATCY 2 cut(s) 1333, 1516
RsaI GTAC 1 cut(s) 1105
RsaNI GTAC 1 cut(s) 1104
RseI CAYNNNNRTG 1 cut(s) 1236
SacI GAGCTC 1 cut(s) 582
SapI GCTCTTC 1 cut(s) 930
SaqAI TTAA 7 cut(s) 393, 506, 750, 873, 885, 891, 1406
SatI GCNGC 2 cut(s) 57, 1619
Sau3AI GATC 5 cut(s) 1228, 1301, 1318, 1333, 1516
Sau96I GGNCC 2 cut(s) 794, 1465
SchI GAGTC 3 cut(s) 239, 251, 1511
ScrFI CCNGG 1 cut(s) 1636
SduI GDGCHC 1 cut(s) 582
SfaNI GCATC 4 cut(s) 110, 690, 1350, 1465
Sfr274I CTCGAG 1 cut(s) 266
SfuI TTCGAA 1 cut(s) 969
SinI GGWCC 2 cut(s) 794, 1465
SlaI CTCGAG 1 cut(s) 266
SmiMI CAYNNNNRTG 1 cut(s) 1236
SmlI CTYRAG 2 cut(s) 266, 749
SmoI CTYRAG 2 cut(s) 266, 749
Sse9I AATT 9 cut(s) 219, 323, 371, 395, 606, 769, 841, 887, 1007
SsiI CCGC 7 cut(s) 5, 54, 57, 170, 742, 1363, 1625
SspI AATATT 1 cut(s) 1602
SspMI CTAG 2 cut(s) 98, 155
SstI GAGCTC 1 cut(s) 582
StyD4I CCNGG 1 cut(s) 1634
StyI CCWWGG 4 cut(s) 283, 704, 915, 1322
TaaI ACNGT 4 cut(s) 445, 1108, 1453, 1469
TaiI ACGT 1 cut(s) 294
TaqI TCGA 6 cut(s) 267, 318, 698, 969, 1304, 1461
TasI AATT 9 cut(s) 219, 323, 371, 395, 606, 769, 841, 887, 1007
TauI GCSGC 1 cut(s) 59
TfiI GAWTC 2 cut(s) 714, 1439
Tru1I TTAA 7 cut(s) 393, 506, 750, 873, 885, 891, 1406
Tru9I TTAA 7 cut(s) 393, 506, 750, 873, 885, 891, 1406
TscAI CASTG 2 cut(s) 1297, 1537
TseFI GTSAC 1 cut(s) 668
TseI GCWGC 1 cut(s) 1618
Tsp45I GTSAC 1 cut(s) 668
TspDTI ATGAA 5 cut(s) 264, 705, 960, 1434, 1607
TspGWI ACGGA 1 cut(s) 133
TspRI CASTG 2 cut(s) 1297, 1537
Van91I CCANNNNNTGG 1 cut(s) 1100
Vha464I CTTAAG 1 cut(s) 749
VpaK11BI GGWCC 2 cut(s) 794, 1465
XapI RAATTY 5 cut(s) 323, 395, 769, 841, 887
XhoI CTCGAG 1 cut(s) 266
XspI CTAG 2 cut(s) 98, 155
ZraI GACGTC 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.