BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G15820 |
| fragaria_vesca | FvH4_4g18220 |
| malus_domestica | MD13G1168100.v1.1 |
| prunus_persica | Prupe.1G135700_v2.0.a1 Prupe.1G135700_v2.0.a1 Prupe.1G135700_v2.0.a1 |
| pyrus_communis | pycom13g14390 |
| rosa_chinensis | RchiOBHm_Chr4g0422351 |
| rosa_laevigata | RLG00000007617 |
| rosa_multiflora | Rmu_sc0013245.1_g000011 |
| rosa_roxburghii | Rroxscaffold_5G00364460 Rroxscaffold_5G00364470 |
| rosa_rugosa | Rorug04G0179300 |
| rosa_samantha | Rh4AG238700 Rh4BG242300 Rh4CG253800 Rh4DG237700 |
| rosa_wichuraiana | Rw4G020640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 294 |
| Acc16I | TGCGCA | 1 cut(s) | 12 |
| Acc65I | GGTACC | 1 cut(s) | 1103 |
| AccB1I | GGYRCC | 1 cut(s) | 1103 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1100 |
| AccBSI | CCGCTC | 1 cut(s) | 742 |
| AccII | CGCG | 1 cut(s) | 631 |
| AciI | CCGC | 7 cut(s) | 5, 54, 57, 170, 742, 1363, 1625 |
| AclWI | GGATC | 2 cut(s) | 1313, 1341 |
| AcoI | YGGCCR | 1 cut(s) | 953 |
| AcsI | RAATTY | 5 cut(s) | 323, 395, 769, 841, 887 |
| AcuI | CTGAAG | 1 cut(s) | 1158 |
| AcyI | GRCGYC | 1 cut(s) | 291 |
| AfaI | GTAC | 1 cut(s) | 1105 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 117, 1100, 1113 |
| AflII | CTTAAG | 1 cut(s) | 749 |
| AluBI | AGCT | 6 cut(s) | 158, 276, 580, 883, 1262, 1621 |
| AluI | AGCT | 6 cut(s) | 158, 276, 580, 883, 1262, 1621 |
| Alw21I | GWGCWC | 1 cut(s) | 582 |
| Alw26I | GTCTC | 4 cut(s) | 332, 980, 1188, 1509 |
| AlwI | GGATC | 2 cut(s) | 1313, 1341 |
| Ama87I | CYCGRG | 1 cut(s) | 266 |
| AoxI | GGCC | 1 cut(s) | 953 |
| ApeKI | GCWGC | 1 cut(s) | 1618 |
| ApoI | RAATTY | 5 cut(s) | 323, 395, 769, 841, 887 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 530, 562 |
| Asp718I | GGTACC | 1 cut(s) | 1103 |
| AspLEI | GCGC | 5 cut(s) | 13, 20, 135, 631, 1671 |
| AspS9I | GGNCC | 2 cut(s) | 794, 1465 |
| AsuC2I | CCSGG | 1 cut(s) | 1636 |
| AsuHPI | GGTGA | 3 cut(s) | 680, 1238, 1535 |
| AsuII | TTCGAA | 1 cut(s) | 969 |
| AvaI | CYCGRG | 1 cut(s) | 266 |
| AvaII | GGWCC | 2 cut(s) | 794, 1465 |
| BanI | GGYRCC | 1 cut(s) | 1103 |
| BanII | GRGCYC | 1 cut(s) | 582 |
| Bbv12I | GWGCWC | 1 cut(s) | 582 |
| BbvCI | CCTCAGC | 1 cut(s) | 897 |
| BbvI | GCAGC | 1 cut(s) | 1630 |
| BccI | CCATC | 3 cut(s) | 83, 1016, 1654 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 278, 312, 1451, 1485 |
| BclI | TGATCA | 1 cut(s) | 1228 |
| BcnI | CCSGG | 1 cut(s) | 1636 |
| BcoDI | GTCTC | 4 cut(s) | 332, 980, 1188, 1509 |
| BfaI | CTAG | 2 cut(s) | 98, 155 |
| BfrI | CTTAAG | 1 cut(s) | 749 |
| BglII | AGATCT | 1 cut(s) | 1516 |
| BisI | GCNGC | 2 cut(s) | 57, 1619 |
| BlsI | GCNGC | 2 cut(s) | 58, 1620 |
| Bme1390I | CCNGG | 1 cut(s) | 1636 |
| Bme18I | GGWCC | 2 cut(s) | 794, 1465 |
| BmeT110I | CYCGRG | 1 cut(s) | 266 |
| BmgT120I | GGNCC | 2 cut(s) | 794, 1465 |
| BmiI | GGNNCC | 3 cut(s) | 795, 1028, 1105 |
| BmrFI | CCNGG | 1 cut(s) | 1636 |
| BmrI | ACTGGG | 1 cut(s) | 464 |
| BmsI | GCATC | 4 cut(s) | 110, 690, 1350, 1465 |
| BmuI | ACTGGG | 1 cut(s) | 464 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 260, 292 |
| BpmI | CTGGAG | 1 cut(s) | 566 |
| Bpu10I | CCTNAGC | 1 cut(s) | 897 |
| Bpu14I | TTCGAA | 1 cut(s) | 969 |
| BpuMI | CCSGG | 1 cut(s) | 1636 |
| BsaHI | GRCGYC | 1 cut(s) | 291 |
| BsaJI | CCNNGG | 4 cut(s) | 283, 704, 915, 1322 |
| BsaWI | WCCGGW | 1 cut(s) | 346 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 117, 1100, 1113 |
| Bse118I | RCCGGY | 1 cut(s) | 951 |
| Bse1I | ACTGG | 3 cut(s) | 459, 583, 1051 |
| Bse3DI | GCAATG | 3 cut(s) | 13, 565, 621 |
| BseDI | CCNNGG | 4 cut(s) | 283, 704, 915, 1322 |
| BseGI | GGATG | 3 cut(s) | 75, 580, 595 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 117, 1100, 1113 |
| BseMI | GCAATG | 3 cut(s) | 13, 565, 621 |
| BseMII | CTCAG | 4 cut(s) | 327, 888, 975, 1433 |
| BseNI | ACTGG | 3 cut(s) | 459, 583, 1051 |
| BseXI | GCAGC | 1 cut(s) | 1630 |
| Bsh1236I | CGCG | 1 cut(s) | 631 |
| BshFI | GGCC | 1 cut(s) | 955 |
| BshNI | GGYRCC | 1 cut(s) | 1103 |
| BsiHKAI | GWGCWC | 1 cut(s) | 582 |
| BsiHKCI | CYCGRG | 1 cut(s) | 266 |
| BsiSI | CCGG | 4 cut(s) | 300, 347, 952, 1635 |
| BslFI | GGGAC | 2 cut(s) | 217, 897 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 117, 1100, 1113 |
| BsmAI | GTCTC | 4 cut(s) | 332, 980, 1188, 1509 |
| BsmBI | CGTCTC | 1 cut(s) | 332 |
| BsmFI | GGGAC | 2 cut(s) | 217, 897 |
| BsnI | GGCC | 1 cut(s) | 955 |
| BsoBI | CYCGRG | 1 cut(s) | 266 |
| Bsp119I | TTCGAA | 1 cut(s) | 969 |
| Bsp1286I | GDGCHC | 1 cut(s) | 582 |
| Bsp143I | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| Bsp19I | CCATGG | 1 cut(s) | 1322 |
| BspACI | CCGC | 7 cut(s) | 5, 54, 57, 170, 742, 1363, 1625 |
| BspANI | GGCC | 1 cut(s) | 955 |
| BspCNI | CTCAG | 4 cut(s) | 328, 889, 976, 1432 |
| BspFNI | CGCG | 1 cut(s) | 631 |
| BspLI | GGNNCC | 3 cut(s) | 795, 1028, 1105 |
| BspPI | GGATC | 2 cut(s) | 1313, 1341 |
| BspQI | GCTCTTC | 1 cut(s) | 930 |
| BspT104I | TTCGAA | 1 cut(s) | 969 |
| BspT107I | GGYRCC | 1 cut(s) | 1103 |
| BspTI | CTTAAG | 1 cut(s) | 749 |
| BsrBI | CCGCTC | 1 cut(s) | 742 |
| BsrDI | GCAATG | 3 cut(s) | 13, 565, 621 |
| BsrFI | RCCGGY | 1 cut(s) | 951 |
| BsrI | ACTGG | 3 cut(s) | 459, 583, 1051 |
| BssAI | RCCGGY | 1 cut(s) | 951 |
| BssECI | CCNNGG | 4 cut(s) | 283, 704, 915, 1322 |
| BssMI | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| BssNI | GRCGYC | 1 cut(s) | 291 |
| BssT1I | CCWWGG | 4 cut(s) | 283, 704, 915, 1322 |
| Bst4CI | ACNGT | 4 cut(s) | 445, 1108, 1453, 1469 |
| Bst6I | CTCTTC | 1 cut(s) | 930 |
| BstACI | GRCGYC | 1 cut(s) | 291 |
| BstAFI | CTTAAG | 1 cut(s) | 749 |
| BstBI | TTCGAA | 1 cut(s) | 969 |
| BstDEI | CTNAG | 4 cut(s) | 336, 897, 984, 1419 |
| BstDSI | CCRYGG | 1 cut(s) | 1322 |
| BstF5I | GGATG | 3 cut(s) | 75, 580, 595 |
| BstFNI | CGCG | 1 cut(s) | 631 |
| BstHHI | GCGC | 5 cut(s) | 13, 20, 135, 631, 1671 |
| BstKTI | GATC | 5 cut(s) | 1231, 1304, 1321, 1336, 1519 |
| BstMAI | GTCTC | 4 cut(s) | 332, 980, 1188, 1509 |
| BstMBI | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 17, 92, 626, 754, 1541, 1624 |
| BstSCI | CCNGG | 1 cut(s) | 1634 |
| BstUI | CGCG | 1 cut(s) | 631 |
| BstV1I | GCAGC | 1 cut(s) | 1630 |
| BstX2I | RGATCY | 2 cut(s) | 1333, 1516 |
| BstYI | RGATCY | 2 cut(s) | 1333, 1516 |
| BsuRI | GGCC | 1 cut(s) | 955 |
| BtgI | CCRYGG | 1 cut(s) | 1322 |
| BtsCI | GGATG | 3 cut(s) | 75, 580, 595 |
| BtsIMutI | CAGTG | 2 cut(s) | 1297, 1537 |
| CfoI | GCGC | 5 cut(s) | 13, 20, 135, 631, 1671 |
| Cfr10I | RCCGGY | 1 cut(s) | 951 |
| Cfr13I | GGNCC | 2 cut(s) | 794, 1465 |
| Csp6I | GTAC | 1 cut(s) | 1104 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1273, 1308 |
| CviAII | CATG | 6 cut(s) | 821, 941, 1232, 1323, 1591, 1685 |
| CviQI | GTAC | 1 cut(s) | 1104 |
| DdeI | CTNAG | 4 cut(s) | 336, 897, 984, 1419 |
| DpnI | GATC | 5 cut(s) | 1230, 1303, 1320, 1335, 1518 |
| DpnII | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| DraI | TTTAAA | 1 cut(s) | 1407 |
| EaeI | YGGCCR | 1 cut(s) | 953 |
| Eam1104I | CTCTTC | 1 cut(s) | 930 |
| EarI | CTCTTC | 1 cut(s) | 930 |
| EciI | GGCGGA | 1 cut(s) | 43 |
| Ecl136II | GAGCTC | 1 cut(s) | 580 |
| Eco130I | CCWWGG | 4 cut(s) | 283, 704, 915, 1322 |
| Eco24I | GRGCYC | 1 cut(s) | 582 |
| Eco47I | GGWCC | 2 cut(s) | 794, 1465 |
| Eco53kI | GAGCTC | 1 cut(s) | 580 |
| Eco57I | CTGAAG | 1 cut(s) | 1158 |
| Eco88I | CYCGRG | 1 cut(s) | 266 |
| EcoICRI | GAGCTC | 1 cut(s) | 580 |
| EcoRI | GAATTC | 2 cut(s) | 323, 769 |
| EcoT14I | CCWWGG | 4 cut(s) | 283, 704, 915, 1322 |
| EcoT38I | GRGCYC | 1 cut(s) | 582 |
| ErhI | CCWWGG | 4 cut(s) | 283, 704, 915, 1322 |
| Esp3I | CGTCTC | 1 cut(s) | 332 |
| FaeI | CATG | 6 cut(s) | 824, 944, 1235, 1326, 1594, 1688 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1172, 1204, 1380, 1412 |
| FaqI | GGGAC | 2 cut(s) | 217, 897 |
| FatI | CATG | 6 cut(s) | 820, 940, 1231, 1322, 1590, 1684 |
| FauI | CCCGC | 1 cut(s) | 177 |
| FauNDI | CATATG | 1 cut(s) | 799 |
| FbaI | TGATCA | 1 cut(s) | 1228 |
| Fnu4HI | GCNGC | 2 cut(s) | 57, 1619 |
| FokI | GGATG | 3 cut(s) | 62, 587, 602 |
| FriOI | GRGCYC | 1 cut(s) | 582 |
| Fsp4HI | GCNGC | 2 cut(s) | 57, 1619 |
| FspAI | RTGCGCAY | 1 cut(s) | 12 |
| FspBI | CTAG | 2 cut(s) | 98, 155 |
| FspI | TGCGCA | 1 cut(s) | 12 |
| GlaI | GCGC | 5 cut(s) | 12, 19, 134, 630, 1670 |
| GluI | GCNGC | 2 cut(s) | 57, 1619 |
| GsuI | CTGGAG | 1 cut(s) | 566 |
| HaeIII | GGCC | 1 cut(s) | 955 |
| HapII | CCGG | 4 cut(s) | 300, 347, 952, 1635 |
| HhaI | GCGC | 5 cut(s) | 13, 20, 135, 631, 1671 |
| Hin1I | GRCGYC | 1 cut(s) | 291 |
| Hin1II | CATG | 6 cut(s) | 824, 944, 1235, 1326, 1594, 1688 |
| Hin6I | GCGC | 5 cut(s) | 11, 18, 133, 629, 1669 |
| HinP1I | GCGC | 5 cut(s) | 11, 18, 133, 629, 1669 |
| HindIII | AAGCTT | 1 cut(s) | 881 |
| HinfI | GANTC | 5 cut(s) | 230, 257, 714, 1439, 1502 |
| HpaII | CCGG | 4 cut(s) | 300, 347, 952, 1635 |
| HphI | GGTGA | 3 cut(s) | 680, 1238, 1535 |
| Hpy166II | GTNNAC | 1 cut(s) | 1204 |
| Hpy188I | TCNGA | 6 cut(s) | 280, 337, 985, 1138, 1359, 1585 |
| Hpy188III | TCNNGA | 8 cut(s) | 194, 266, 470, 549, 1111, 1161, 1248, 1568 |
| Hpy8I | GTNNAC | 1 cut(s) | 1204 |
| Hpy99I | CGWCG | 3 cut(s) | 120, 293, 296 |
| HpyAV | CCTTC | 7 cut(s) | 34, 200, 644, 649, 851, 1133, 1588 |
| HpyCH4III | ACNGT | 4 cut(s) | 445, 1108, 1453, 1469 |
| HpyCH4IV | ACGT | 1 cut(s) | 291 |
| HpyCH4V | TGCA | 2 cut(s) | 757, 1015 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 17, 92, 626, 754, 1541, 1624 |
| HpyF3I | CTNAG | 4 cut(s) | 336, 897, 984, 1419 |
| HpySE526I | ACGT | 1 cut(s) | 291 |
| Hsp92I | GRCGYC | 1 cut(s) | 291 |
| Hsp92II | CATG | 6 cut(s) | 824, 944, 1235, 1326, 1594, 1688 |
| HspAI | GCGC | 5 cut(s) | 11, 18, 133, 629, 1669 |
| KpnI | GGTACC | 1 cut(s) | 1107 |
| Ksp22I | TGATCA | 1 cut(s) | 1228 |
| Kzo9I | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| LguI | GCTCTTC | 1 cut(s) | 930 |
| LmnI | GCTCC | 5 cut(s) | 56, 281, 585, 739, 1549 |
| Lsp1109I | GCAGC | 1 cut(s) | 1630 |
| LweI | GCATC | 4 cut(s) | 110, 690, 1350, 1465 |
| MaeI | CTAG | 2 cut(s) | 98, 155 |
| MaeII | ACGT | 1 cut(s) | 291 |
| MaeIII | GTNAC | 3 cut(s) | 238, 668, 786 |
| MalI | GATC | 5 cut(s) | 1230, 1303, 1320, 1335, 1518 |
| MbiI | CCGCTC | 1 cut(s) | 742 |
| MboI | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| MflI | RGATCY | 2 cut(s) | 1333, 1516 |
| MhlI | GDGCHC | 1 cut(s) | 582 |
| MluCI | AATT | 9 cut(s) | 219, 323, 371, 395, 606, 769, 841, 887, 1007 |
| MlyI | GAGTC | 3 cut(s) | 239, 251, 1511 |
| MmeI | TCCRAC | 5 cut(s) | 303, 567, 942, 1060, 1311 |
| MseI | TTAA | 7 cut(s) | 393, 506, 750, 873, 885, 891, 1406 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1236 |
| MspA1I | CMGCKG | 1 cut(s) | 1627 |
| MspCI | CTTAAG | 1 cut(s) | 749 |
| MspI | CCGG | 4 cut(s) | 300, 347, 952, 1635 |
| MspR9I | CCNGG | 1 cut(s) | 1636 |
| MvnI | CGCG | 1 cut(s) | 631 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 17, 92, 626, 754, 1541, 1624 |
| NciI | CCSGG | 1 cut(s) | 1636 |
| NcoI | CCATGG | 1 cut(s) | 1322 |
| NdeI | CATATG | 1 cut(s) | 799 |
| NdeII | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| NlaIII | CATG | 6 cut(s) | 824, 944, 1235, 1326, 1594, 1688 |
| NlaIV | GGNNCC | 3 cut(s) | 795, 1028, 1105 |
| NmuCI | GTSAC | 1 cut(s) | 668 |
| NsbI | TGCGCA | 1 cut(s) | 12 |
| NspV | TTCGAA | 1 cut(s) | 969 |
| PaeR7I | CTCGAG | 1 cut(s) | 266 |
| PciSI | GCTCTTC | 1 cut(s) | 930 |
| PfeI | GAWTC | 2 cut(s) | 714, 1439 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1100 |
| PkrI | GCNGC | 2 cut(s) | 58, 1620 |
| PleI | GAGTC | 3 cut(s) | 238, 251, 1510 |
| PpsI | GAGTC | 3 cut(s) | 238, 251, 1510 |
| Psp124BI | GAGCTC | 1 cut(s) | 582 |
| PspN4I | GGNNCC | 3 cut(s) | 795, 1028, 1105 |
| PspPI | GGNCC | 2 cut(s) | 794, 1465 |
| PsuI | RGATCY | 2 cut(s) | 1333, 1516 |
| RsaI | GTAC | 1 cut(s) | 1105 |
| RsaNI | GTAC | 1 cut(s) | 1104 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1236 |
| SacI | GAGCTC | 1 cut(s) | 582 |
| SapI | GCTCTTC | 1 cut(s) | 930 |
| SaqAI | TTAA | 7 cut(s) | 393, 506, 750, 873, 885, 891, 1406 |
| SatI | GCNGC | 2 cut(s) | 57, 1619 |
| Sau3AI | GATC | 5 cut(s) | 1228, 1301, 1318, 1333, 1516 |
| Sau96I | GGNCC | 2 cut(s) | 794, 1465 |
| SchI | GAGTC | 3 cut(s) | 239, 251, 1511 |
| ScrFI | CCNGG | 1 cut(s) | 1636 |
| SduI | GDGCHC | 1 cut(s) | 582 |
| SfaNI | GCATC | 4 cut(s) | 110, 690, 1350, 1465 |
| Sfr274I | CTCGAG | 1 cut(s) | 266 |
| SfuI | TTCGAA | 1 cut(s) | 969 |
| SinI | GGWCC | 2 cut(s) | 794, 1465 |
| SlaI | CTCGAG | 1 cut(s) | 266 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1236 |
| SmlI | CTYRAG | 2 cut(s) | 266, 749 |
| SmoI | CTYRAG | 2 cut(s) | 266, 749 |
| Sse9I | AATT | 9 cut(s) | 219, 323, 371, 395, 606, 769, 841, 887, 1007 |
| SsiI | CCGC | 7 cut(s) | 5, 54, 57, 170, 742, 1363, 1625 |
| SspI | AATATT | 1 cut(s) | 1602 |
| SspMI | CTAG | 2 cut(s) | 98, 155 |
| SstI | GAGCTC | 1 cut(s) | 582 |
| StyD4I | CCNGG | 1 cut(s) | 1634 |
| StyI | CCWWGG | 4 cut(s) | 283, 704, 915, 1322 |
| TaaI | ACNGT | 4 cut(s) | 445, 1108, 1453, 1469 |
| TaiI | ACGT | 1 cut(s) | 294 |
| TaqI | TCGA | 6 cut(s) | 267, 318, 698, 969, 1304, 1461 |
| TasI | AATT | 9 cut(s) | 219, 323, 371, 395, 606, 769, 841, 887, 1007 |
| TauI | GCSGC | 1 cut(s) | 59 |
| TfiI | GAWTC | 2 cut(s) | 714, 1439 |
| Tru1I | TTAA | 7 cut(s) | 393, 506, 750, 873, 885, 891, 1406 |
| Tru9I | TTAA | 7 cut(s) | 393, 506, 750, 873, 885, 891, 1406 |
| TscAI | CASTG | 2 cut(s) | 1297, 1537 |
| TseFI | GTSAC | 1 cut(s) | 668 |
| TseI | GCWGC | 1 cut(s) | 1618 |
| Tsp45I | GTSAC | 1 cut(s) | 668 |
| TspDTI | ATGAA | 5 cut(s) | 264, 705, 960, 1434, 1607 |
| TspGWI | ACGGA | 1 cut(s) | 133 |
| TspRI | CASTG | 2 cut(s) | 1297, 1537 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1100 |
| Vha464I | CTTAAG | 1 cut(s) | 749 |
| VpaK11BI | GGWCC | 2 cut(s) | 794, 1465 |
| XapI | RAATTY | 5 cut(s) | 323, 395, 769, 841, 887 |
| XhoI | CTCGAG | 1 cut(s) | 266 |
| XspI | CTAG | 2 cut(s) | 98, 155 |
| ZraI | GACGTC | 1 cut(s) | 292 |