DNA polymerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10520 AT1G10520 |
| fragaria_vesca | FvH4_4g35010 FvH4_4g35030 |
| malus_domestica | MD16G1086600.v1.1 MD16G1086700.v1.1 |
| prunus_persica | Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 |
| pyrus_communis | pycom16g07470 |
| rosa_chinensis | RchiOBHm_Chr4g0444541 RchiOBHm_Chr4g0444551 |
| rosa_laevigata | RLG00000005822 RLG00000005825 |
| rosa_multiflora | Rmu_sc0003839.1_g000005 Rmu_sc0012648.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00385000 Rroxscaffold_5G00385010 |
| rosa_rugosa | Rorug04G0353500 Rorug04G0353600 Rorug04G0353700 Rorug04G0353800 |
| rosa_samantha | Rh4AG413800 Rh4BG425500 Rh4CG439900 Rh4CG440200 Rh4DG420800 Rh4DG421100 |
| rosa_wichuraiana | Rw4G035540 Rw4G035550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccII | CGCG | 1 cut(s) | 1023 |
| AciI | CCGC | 3 cut(s) | 377, 835, 1023 |
| AclWI | GGATC | 6 cut(s) | 35, 471, 916, 929, 1018, 1050 |
| AcsI | RAATTY | 3 cut(s) | 783, 874, 1433 |
| AcuI | CTGAAG | 1 cut(s) | 960 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 5 cut(s) | 317, 606, 759, 1156, 1174 |
| AfeI | AGCGCT | 1 cut(s) | 230 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 139, 671, 1138 |
| AflII | CTTAAG | 1 cut(s) | 1247 |
| AgsI | TTSAA | 9 cut(s) | 432, 514, 631, 638, 743, 853, 1312, 1432, 1484 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1112, 1144 |
| Alw21I | GWGCWC | 2 cut(s) | 290, 738 |
| AlwI | GGATC | 6 cut(s) | 35, 471, 916, 929, 1018, 1050 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 806 |
| Ama87I | CYCGRG | 1 cut(s) | 986 |
| Aor51HI | AGCGCT | 1 cut(s) | 230 |
| ApoI | RAATTY | 3 cut(s) | 783, 874, 1433 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1181, 1213 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 954 |
| AspLEI | GCGC | 4 cut(s) | 7, 231, 238, 1424 |
| AspS9I | GGNCC | 4 cut(s) | 130, 193, 646, 797 |
| AsuC2I | CCSGG | 2 cut(s) | 987, 988 |
| AsuHPI | GGTGA | 2 cut(s) | 581, 1423 |
| AsuNHI | GCTAGC | 1 cut(s) | 1418 |
| AvaI | CYCGRG | 1 cut(s) | 986 |
| AvaII | GGWCC | 4 cut(s) | 130, 193, 646, 797 |
| AxyI | CCTNAGG | 1 cut(s) | 45 |
| BaeGI | GKGCMC | 1 cut(s) | 495 |
| BamHI | GGATCC | 1 cut(s) | 921 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 290 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 192, 224 |
| BbsI | GAAGAC | 2 cut(s) | 159, 336 |
| Bbv12I | GWGCWC | 2 cut(s) | 290, 738 |
| BccI | CCATC | 3 cut(s) | 327, 940, 1064 |
| BceAI | ACGGC | 1 cut(s) | 84 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 465, 499 |
| BcnI | CCSGG | 2 cut(s) | 987, 988 |
| BfaI | CTAG | 6 cut(s) | 272, 363, 1046, 1217, 1331, 1419 |
| BfmI | CTRYAG | 1 cut(s) | 959 |
| BfoI | RGCGCY | 2 cut(s) | 8, 232 |
| BfrI | CTTAAG | 1 cut(s) | 1247 |
| BglII | AGATCT | 1 cut(s) | 1243 |
| Bme1390I | CCNGG | 2 cut(s) | 987, 988 |
| Bme18I | GGWCC | 4 cut(s) | 130, 193, 646, 797 |
| BmeT110I | CYCGRG | 1 cut(s) | 986 |
| BmgT120I | GGNCC | 4 cut(s) | 130, 193, 646, 797 |
| BmiI | GGNNCC | 3 cut(s) | 6, 195, 923 |
| BmrFI | CCNGG | 2 cut(s) | 987, 988 |
| BmrI | ACTGGG | 2 cut(s) | 227, 723 |
| BmtI | GCTAGC | 1 cut(s) | 1422 |
| BmuI | ACTGGG | 2 cut(s) | 227, 723 |
| BpiI | GAAGAC | 2 cut(s) | 159, 336 |
| Bpu10I | CCTNAGC | 1 cut(s) | 289 |
| BpuMI | CCSGG | 2 cut(s) | 987, 988 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 5 cut(s) | 564, 986, 987, 1465, 1475 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 285, 315, 963, 993 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 139, 671, 1138 |
| Bse1I | ACTGG | 3 cut(s) | 222, 608, 718 |
| Bse21I | CCTNAGG | 1 cut(s) | 45 |
| Bse3DI | GCAATG | 1 cut(s) | 476 |
| BseDI | CCNNGG | 5 cut(s) | 564, 986, 987, 1465, 1475 |
| BseGI | GGATG | 1 cut(s) | 1063 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 139, 671, 1138 |
| BseMI | GCAATG | 1 cut(s) | 476 |
| BseMII | CTCAG | 3 cut(s) | 59, 297, 303 |
| BseNI | ACTGG | 3 cut(s) | 222, 608, 718 |
| BseRI | GAGGAG | 1 cut(s) | 1181 |
| BseSI | GKGCMC | 1 cut(s) | 495 |
| BsgI | GTGCAG | 1 cut(s) | 792 |
| Bsh1236I | CGCG | 1 cut(s) | 1023 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 2 cut(s) | 290, 738 |
| BsiHKCI | CYCGRG | 1 cut(s) | 986 |
| BsiSI | CCGG | 3 cut(s) | 987, 1351, 1395 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 139, 671, 1138 |
| BsoBI | CYCGRG | 1 cut(s) | 986 |
| Bsp1286I | GDGCHC | 3 cut(s) | 290, 495, 738 |
| BspACI | CCGC | 3 cut(s) | 377, 835, 1023 |
| BspCNI | CTCAG | 3 cut(s) | 58, 298, 302 |
| BspFNI | CGCG | 1 cut(s) | 1023 |
| BspLI | GGNNCC | 3 cut(s) | 6, 195, 923 |
| BspOI | GCTAGC | 1 cut(s) | 1422 |
| BspPI | GGATC | 6 cut(s) | 35, 471, 916, 929, 1018, 1050 |
| BspQI | GCTCTTC | 1 cut(s) | 1396 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTI | CTTAAG | 1 cut(s) | 1247 |
| BsrDI | GCAATG | 1 cut(s) | 476 |
| BsrI | ACTGG | 3 cut(s) | 222, 608, 718 |
| BssECI | CCNNGG | 5 cut(s) | 564, 986, 987, 1465, 1475 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 3 cut(s) | 564, 1465, 1475 |
| Bst4CI | ACNGT | 2 cut(s) | 36, 253 |
| Bst6I | CTCTTC | 3 cut(s) | 936, 1216, 1396 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 1247 |
| BstC8I | GCNNGC | 2 cut(s) | 1420, 1426 |
| BstDEI | CTNAG | 5 cut(s) | 45, 76, 289, 306, 395 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1136 |
| BstF5I | GGATG | 1 cut(s) | 1063 |
| BstFNI | CGCG | 1 cut(s) | 1023 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 232 |
| BstHHI | GCGC | 4 cut(s) | 7, 231, 238, 1424 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 235, 1395 |
| BstSCI | CCNGG | 2 cut(s) | 985, 986 |
| BstSFI | CTRYAG | 1 cut(s) | 959 |
| BstSLI | GKGCMC | 1 cut(s) | 495 |
| BstUI | CGCG | 1 cut(s) | 1023 |
| BstV2I | GAAGAC | 2 cut(s) | 159, 336 |
| BstX2I | RGATCY | 3 cut(s) | 921, 1042, 1243 |
| BstYI | RGATCY | 3 cut(s) | 921, 1042, 1243 |
| Bsu36I | CCTNAGG | 1 cut(s) | 45 |
| BtgZI | GCGATG | 2 cut(s) | 381, 1220 |
| BtsCI | GGATG | 1 cut(s) | 1063 |
| BtsI | GCAGTG | 1 cut(s) | 471 |
| BtsIMutI | CAGTG | 3 cut(s) | 272, 471, 809 |
| Cac8I | GCNNGC | 2 cut(s) | 1420, 1426 |
| CaiI | CAGNNNCTG | 1 cut(s) | 806 |
| CfoI | GCGC | 4 cut(s) | 7, 231, 238, 1424 |
| Cfr13I | GGNCC | 4 cut(s) | 130, 193, 646, 797 |
| Cfr9I | CCCGGG | 1 cut(s) | 986 |
| CseI | GACGC | 1 cut(s) | 1029 |
| Csp6I | GTAC | 5 cut(s) | 316, 605, 758, 1155, 1173 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 492, 527 |
| CviAII | CATG | 3 cut(s) | 932, 1385, 1490 |
| CviQI | GTAC | 5 cut(s) | 316, 605, 758, 1155, 1173 |
| DdeI | CTNAG | 5 cut(s) | 45, 76, 289, 306, 395 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DraI | TTTAAA | 1 cut(s) | 244 |
| Eam1104I | CTCTTC | 3 cut(s) | 936, 1216, 1396 |
| EarI | CTCTTC | 3 cut(s) | 936, 1216, 1396 |
| Ecl136II | GAGCTC | 1 cut(s) | 288 |
| Eco130I | CCWWGG | 3 cut(s) | 564, 1465, 1475 |
| Eco24I | GRGCYC | 1 cut(s) | 290 |
| Eco32I | GATATC | 1 cut(s) | 910 |
| Eco47I | GGWCC | 4 cut(s) | 130, 193, 646, 797 |
| Eco47III | AGCGCT | 1 cut(s) | 230 |
| Eco53kI | GAGCTC | 1 cut(s) | 288 |
| Eco57I | CTGAAG | 1 cut(s) | 960 |
| Eco81I | CCTNAGG | 1 cut(s) | 45 |
| Eco88I | CYCGRG | 1 cut(s) | 986 |
| EcoICRI | GAGCTC | 1 cut(s) | 288 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1136 |
| EcoRV | GATATC | 1 cut(s) | 910 |
| EcoT14I | CCWWGG | 3 cut(s) | 564, 1465, 1475 |
| EcoT22I | ATGCAT | 1 cut(s) | 1276 |
| EcoT38I | GRGCYC | 1 cut(s) | 290 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 3 cut(s) | 564, 1465, 1475 |
| FaeI | CATG | 3 cut(s) | 935, 1388, 1493 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 388, 420 |
| FatI | CATG | 3 cut(s) | 931, 1384, 1489 |
| FauI | CCCGC | 1 cut(s) | 1016 |
| FokI | GGATG | 1 cut(s) | 1050 |
| FriOI | GRGCYC | 1 cut(s) | 290 |
| FspBI | CTAG | 6 cut(s) | 272, 363, 1046, 1217, 1331, 1419 |
| GlaI | GCGC | 4 cut(s) | 6, 230, 237, 1423 |
| HaeII | RGCGCY | 2 cut(s) | 8, 232 |
| HapII | CCGG | 3 cut(s) | 987, 1351, 1395 |
| HgaI | GACGC | 1 cut(s) | 1029 |
| HhaI | GCGC | 4 cut(s) | 7, 231, 238, 1424 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 935, 1388, 1493 |
| Hin6I | GCGC | 4 cut(s) | 5, 229, 236, 1422 |
| HinP1I | GCGC | 4 cut(s) | 5, 229, 236, 1422 |
| HincII | GTYRAC | 1 cut(s) | 1189 |
| HindII | GTYRAC | 1 cut(s) | 1189 |
| HindIII | AAGCTT | 2 cut(s) | 1029, 1426 |
| HinfI | GANTC | 7 cut(s) | 449, 634, 863, 1078, 1178, 1337, 1347 |
| HpaII | CCGG | 3 cut(s) | 987, 1351, 1395 |
| HphI | GGTGA | 2 cut(s) | 581, 1423 |
| Hpy166II | GTNNAC | 6 cut(s) | 32, 107, 646, 1189, 1255, 1403 |
| Hpy188I | TCNGA | 5 cut(s) | 40, 96, 307, 468, 1202 |
| Hpy188III | TCNNGA | 8 cut(s) | 291, 410, 538, 631, 698, 706, 1046, 1067 |
| Hpy8I | GTNNAC | 6 cut(s) | 32, 107, 646, 1189, 1255, 1403 |
| Hpy99I | CGWCG | 1 cut(s) | 105 |
| HpyAV | CCTTC | 1 cut(s) | 292 |
| HpyCH4III | ACNGT | 2 cut(s) | 36, 253 |
| HpyCH4IV | ACGT | 1 cut(s) | 839 |
| HpyCH4V | TGCA | 6 cut(s) | 476, 481, 685, 809, 1209, 1274 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 235, 1395 |
| HpyF3I | CTNAG | 5 cut(s) | 45, 76, 289, 306, 395 |
| HpySE526I | ACGT | 1 cut(s) | 839 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 3 cut(s) | 935, 1388, 1493 |
| HspAI | GCGC | 4 cut(s) | 5, 229, 236, 1422 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| LguI | GCTCTTC | 1 cut(s) | 1396 |
| LmnI | GCTCC | 1 cut(s) | 733 |
| MaeI | CTAG | 6 cut(s) | 272, 363, 1046, 1217, 1331, 1419 |
| MaeII | ACGT | 1 cut(s) | 839 |
| MaeIII | GTNAC | 2 cut(s) | 172, 706 |
| MflI | RGATCY | 3 cut(s) | 921, 1042, 1243 |
| MhlI | GDGCHC | 3 cut(s) | 290, 495, 738 |
| MluCI | AATT | 7 cut(s) | 125, 326, 783, 815, 874, 1056, 1433 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 1087 |
| MmeI | TCCRAC | 2 cut(s) | 711, 949 |
| Mph1103I | ATGCAT | 1 cut(s) | 1276 |
| MroXI | GAANNNNTTC | 1 cut(s) | 954 |
| MseI | TTAA | 6 cut(s) | 243, 654, 869, 893, 1115, 1248 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1068 |
| MspCI | CTTAAG | 1 cut(s) | 1247 |
| MspI | CCGG | 3 cut(s) | 987, 1351, 1395 |
| MspR9I | CCNGG | 2 cut(s) | 987, 988 |
| MvnI | CGCG | 1 cut(s) | 1023 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 235, 1395 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 2 cut(s) | 987, 988 |
| NheI | GCTAGC | 1 cut(s) | 1418 |
| NlaIII | CATG | 3 cut(s) | 935, 1388, 1493 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 195, 923 |
| NmuCI | GTSAC | 2 cut(s) | 172, 706 |
| NsiI | ATGCAT | 1 cut(s) | 1276 |
| PciSI | GCTCTTC | 1 cut(s) | 1396 |
| PdmI | GAANNNNTTC | 1 cut(s) | 954 |
| PfeI | GAWTC | 6 cut(s) | 449, 634, 863, 1178, 1337, 1347 |
| PleI | GAGTC | 1 cut(s) | 1086 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PpsI | GAGTC | 1 cut(s) | 1086 |
| Psp124BI | GAGCTC | 1 cut(s) | 290 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 195, 923 |
| PspPI | GGNCC | 4 cut(s) | 130, 193, 646, 797 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 942, 974 |
| PstNI | CAGNNNCTG | 1 cut(s) | 806 |
| PsuI | RGATCY | 3 cut(s) | 921, 1042, 1243 |
| RsaI | GTAC | 5 cut(s) | 317, 606, 759, 1156, 1174 |
| RsaNI | GTAC | 5 cut(s) | 316, 605, 758, 1155, 1173 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1068 |
| SacI | GAGCTC | 1 cut(s) | 290 |
| SapI | GCTCTTC | 1 cut(s) | 1396 |
| SaqAI | TTAA | 6 cut(s) | 243, 654, 869, 893, 1115, 1248 |
| Sau96I | GGNCC | 4 cut(s) | 130, 193, 646, 797 |
| SchI | GAGTC | 1 cut(s) | 1087 |
| ScrFI | CCNGG | 2 cut(s) | 987, 988 |
| SduI | GDGCHC | 3 cut(s) | 290, 495, 738 |
| SfcI | CTRYAG | 1 cut(s) | 959 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| SinI | GGWCC | 4 cut(s) | 130, 193, 646, 797 |
| SmaI | CCCGGG | 1 cut(s) | 988 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1068 |
| SmlI | CTYRAG | 1 cut(s) | 1247 |
| SmoI | CTYRAG | 1 cut(s) | 1247 |
| Sse9I | AATT | 7 cut(s) | 125, 326, 783, 815, 874, 1056, 1433 |
| SsiI | CCGC | 3 cut(s) | 377, 835, 1023 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspI | AATATT | 1 cut(s) | 553 |
| SspMI | CTAG | 6 cut(s) | 272, 363, 1046, 1217, 1331, 1419 |
| SstI | GAGCTC | 1 cut(s) | 290 |
| StyD4I | CCNGG | 2 cut(s) | 985, 986 |
| StyI | CCWWGG | 3 cut(s) | 564, 1465, 1475 |
| TaaI | ACNGT | 2 cut(s) | 36, 253 |
| TaiI | ACGT | 1 cut(s) | 842 |
| TaqI | TCGA | 2 cut(s) | 81, 150 |
| TaqII | GACCGA | 1 cut(s) | 591 |
| TasI | AATT | 7 cut(s) | 125, 326, 783, 815, 874, 1056, 1433 |
| TfiI | GAWTC | 6 cut(s) | 449, 634, 863, 1178, 1337, 1347 |
| Tru1I | TTAA | 6 cut(s) | 243, 654, 869, 893, 1115, 1248 |
| Tru9I | TTAA | 6 cut(s) | 243, 654, 869, 893, 1115, 1248 |
| TscAI | CASTG | 3 cut(s) | 272, 478, 816 |
| TseFI | GTSAC | 2 cut(s) | 172, 706 |
| Tsp45I | GTSAC | 2 cut(s) | 172, 706 |
| TspDTI | ATGAA | 5 cut(s) | 387, 765, 855, 873, 1139 |
| TspMI | CCCGGG | 1 cut(s) | 986 |
| TspRI | CASTG | 3 cut(s) | 272, 478, 816 |
| Vha464I | CTTAAG | 1 cut(s) | 1247 |
| VpaK11BI | GGWCC | 4 cut(s) | 130, 193, 646, 797 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1136 |
| XapI | RAATTY | 3 cut(s) | 783, 874, 1433 |
| XbaI | TCTAGA | 1 cut(s) | 1045 |
| XmaI | CCCGGG | 1 cut(s) | 986 |
| XmnI | GAANNNNTTC | 1 cut(s) | 954 |
| XspI | CTAG | 6 cut(s) | 272, 363, 1046, 1217, 1331, 1419 |
| Zsp2I | ATGCAT | 1 cut(s) | 1276 |