Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0004762

Physical Location & Seq

Genomic Coordinates Reverse (-)

62333557 .. 62337712

Gene Structure 4156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G035540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGAGTAAATTTGGAGATCTCAATAGAAATGCTCTTAATGAATTGACACCCACATTCACTAAAAAAAAAAAAAAAAAAACTTTGCTTATCAAGAAGAGCTTTCCCATAAACACCTCAAGAAGTTTATTGAAAGAAGTGTCCTCCAAGGACTTGAGTAAAACCGTAAAAAGCTTTCGTCTTGAACTCTTGATTTACAAGCACCAAAAACACCCAGAAACAAAAACCGAAGCCAAAATAATGGCGCCAAGGGCAACCAGAAACCAAAGTCCACCGTGCGATCCTGACGGAATGTTCGCCGGCATGGTCGTCTTTTTAGTCCACAATGGAGTCCAGAACCGTCGATTGCAGATTTGGAAGCAGAAACTGGTCCAAATGGGAGCCACTATAGAATTGCGAGTAACCAAAAATGTCACACACATATTGGCTATGAACCCAGAAGCCCTCTTGCAAGAAGTGGGCAGTGAGCGATTGGGTTTGTTTAAAGGAAGAGTTGTACTATATCAATGGCTACAGGATAGCTTGAGCTCAGGTGAAAAGGTACCTGAAGAATTGTACCTTGTGAATTTGGATGCTGACAAGTCTTCCAGTGATTACAATTCCACTGAAAATGAAACCCCAAATCCCAAAAAGACTAAACTCTCTCCTGAGAATTCACCTCACACTCCAAGCCCTAAAACCCCCAAAGCTCTAAATGAGGATCAGGTCACACCATTGCAGTCATCCTCACCGTACAGCCCACCTGATTTGAACAGCAACATAACTCAGATATTTGGAAAGCTTATCAATATTTATAGAGCCTTGGGCGATGACCGGAGATCTTTTAGCTATTACAAGGCTATACCTGTTATAGAGAGGTTGCCGTTCAAGATACAGAGTCAGGACCAAGTTAAAGGCTTACCTAACATTGGAAAGTCAATGCAAGACCATATTCAGGAAATAGTGACTACCGGGAAGTTATCCAAGTTGGAGCATTTTGAAACAGATGAAAAGGTACGAACTATCAGCTTATTTGGGGAAGTTTGGGGCGTTGGTCCAGCTACTGCACAAAAATTGTATGAGAAAGGACACCGCACATTAGATGATCTGAAGAATGAAGCATCATTAACAAATTCACAGAAGTTAGGGTTAAAATATTTTGATGATATCAAACAGAGAATTCCACGCAATGAGGCTCAGGAGATGGAACGTCTACTACAGAAAGCTGGAGAAGATGTTTTGCCTGGGGTGGACATTGTATGTGGAGGATCATATAGACGCGGGAAAGCTTCTTGTGGGGATCTGGACATTATAATTACACATCCTGATGGAAAAAGTCATAGAGGCTTTTTACCAAAATACGTAAAGCATTTAAAGGATATGAAGTTTCTAAGGGAGGATCTGGTTTTCAGTACACACAGTGAGGAGGGTACTGATTCTGGTGTCGACACATATTTTGGGCTTTGCACATATCCTGGACGAGAACTGCGCCACCGCATAGATATCAAGGTCTACCCACGGGAAATATATGCATTTGCGCTAATACATTGGACAGGCAATGATGTATTGAATAGGAGGTTGAGAGTTCTAGCCGAATCTAAAGGATTCCTACTTGATGATGATGGGCTATTTCCAGCTACACGGGGCTCTCTCGGTCAACGGGGCATGAGAGGTAGCGCAAGCTTGAAATTTGACACAGAAAAGGAGGTCTTTGAGTTTCTCGGGTTTCCTTGGCTTGAACCACAAGAGAGAAATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006287 GO:0006289 GO:0006302 GO:0006303 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0016740 GO:0016772 GO:0016779 GO:0016829 GO:0016835 GO:0018130 GO:0019438 GO:0030145 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051575 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097510 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko03450 map03410 map03450

Pfam Domains

Protein Families

BRCT DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 LIM

Protein Analysis

578

Amino Acids

65.56

Weight (kDa)

9.25

Isoelectric Point (pI)

43.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HHH_8	PF14716	250 - 319	7.6e-14	Helix-hairpin-helix domain
DNA_pol_lambd_f	PF10391	336 - 382	2.9e-20	Fingers domain of DNA polymerase lambda
DNA_pol_B_palm	PF14792	385 - 499	5.8e-30	DNA polymerase beta palm
DNA_pol_B_thumb	PF14791	505 - 577	7.7e-19	DNA polymerase beta thumb

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10520 AT1G10520
fragaria_vesca	FvH4_4g35010 FvH4_4g35030
malus_domestica	MD16G1086600.v1.1 MD16G1086700.v1.1
prunus_persica	Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1
pyrus_communis	pycom16g07470
rosa_chinensis	RchiOBHm_Chr4g0444541 RchiOBHm_Chr4g0444551
rosa_laevigata	RLG00000005822 RLG00000005825
rosa_multiflora	Rmu_sc0003839.1_g000005 Rmu_sc0012648.1_g000007
rosa_roxburghii	Rroxscaffold_5G00385000 Rroxscaffold_5G00385010
rosa_rugosa	Rorug04G0353500 Rorug04G0353600 Rorug04G0353700 Rorug04G0353800
rosa_samantha	Rh4AG413800 Rh4BG425500 Rh4CG439900 Rh4CG440200 Rh4DG420800 Rh4DG421100
rosa_wichuraiana	Rw4G035540 Rw4G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1289
Acc65I	GGTACC	1 cut(s)	538
AccB1I	GGYRCC	2 cut(s)	241, 538
AccI	GTMKAC	3 cut(s)	1189, 1422, 1488
AccII	CGCG	1 cut(s)	1257
AciI	CCGC	3 cut(s)	1069, 1257, 1471
AclWI	GGATC	5 cut(s)	272, 705, 1252, 1284, 1383
AcsI	RAATTY	6 cut(s)	8, 562, 649, 1108, 1155, 1664
AcuI	CTGAAG	2 cut(s)	564, 1106
AcyI	GRCGYC	1 cut(s)	242
AdeI	CACNNNGTG	1 cut(s)	1397
AfaI	GTAC	7 cut(s)	495, 540, 554, 731, 993, 1390, 1408
AfiI	CCNNNNNNNGG	2 cut(s)	905, 931
AgsI	TTSAA	8 cut(s)	130, 182, 748, 865, 977, 1546, 1663, 1715
AjnI	CCWGG	2 cut(s)	1219, 1450
Alw21I	GWGCWC	1 cut(s)	527
AlwI	GGATC	5 cut(s)	272, 705, 1252, 1284, 1383
AlwNI	CAGNNNCTG	2 cut(s)	364, 1040
Ama87I	CYCGRG	1 cut(s)	1697
ApoI	RAATTY	6 cut(s)	8, 562, 649, 1108, 1155, 1664
ArsI	GACNNNNNNTTYG	4 cut(s)	275, 307, 1415, 1447
Asp718I	GGTACC	1 cut(s)	538
AspLEI	GCGC	4 cut(s)	244, 1467, 1516, 1655
AspS9I	GGNCC	3 cut(s)	367, 880, 1031
AsuC2I	CCSGG	1 cut(s)	949
AsuHPI	GGTGA	3 cut(s)	542, 645, 717
AvaI	CYCGRG	1 cut(s)	1697
AvaII	GGWCC	3 cut(s)	367, 880, 1031
BanI	GGYRCC	2 cut(s)	241, 538
BanII	GRGCYC	2 cut(s)	527, 1625
BbsI	GAAGAC	1 cut(s)	573
Bbv12I	GWGCWC	1 cut(s)	527
BccI	CCATC	3 cut(s)	1174, 1298, 1592
BceAI	ACGGC	1 cut(s)	844
BciT130I	CCWGG	2 cut(s)	1221, 1452
BcnI	CCSGG	1 cut(s)	949
BfaI	CTAG	1 cut(s)	1565
BfmI	CTRYAG	3 cut(s)	384, 509, 1193
BfoI	RGCGCY	1 cut(s)	245
BglII	AGATCT	2 cut(s)	16, 815
Bme1390I	CCNGG	3 cut(s)	949, 1221, 1452
Bme18I	GGWCC	3 cut(s)	367, 880, 1031
BmeT110I	CYCGRG	1 cut(s)	1697
BmgT120I	GGNCC	3 cut(s)	367, 880, 1031
BmiI	GGNNCC	3 cut(s)	243, 379, 540
BmrFI	CCNGG	3 cut(s)	949, 1221, 1452
BmsI	GCATC	2 cut(s)	559, 1106
BpiI	GAAGAC	1 cut(s)	573
BpmI	CTGGAG	1 cut(s)	1224
Bpu10I	CCTNAGC	2 cut(s)	526, 1173
BpuEI	CTTGAG	3 cut(s)	100, 172, 541
BpuMI	CCSGG	1 cut(s)	949
BsaAI	YACGTR	1 cut(s)	1339
BsaHI	GRCGYC	1 cut(s)	242
BsaJI	CCNNGG	6 cut(s)	144, 245, 798, 1220, 1493, 1706
BsaWI	WCCGGW	1 cut(s)	810
BsaXI	ACNNNNNCTCC	2 cut(s)	1197, 1227
Bsc4I	CCNNNNNNNGG	2 cut(s)	905, 931
Bse118I	RCCGGY	1 cut(s)	296
Bse1I	ACTGG	2 cut(s)	369, 585
Bse3DI	GCAATG	3 cut(s)	710, 1171, 1540
BseBI	CCWGG	2 cut(s)	1221, 1452
BseDI	CCNNGG	6 cut(s)	144, 245, 798, 1220, 1493, 1706
BseGI	GGATG	3 cut(s)	574, 719, 1297
BseLI	CCNNNNNNNGG	2 cut(s)	905, 931
BseMI	GCAATG	3 cut(s)	710, 1171, 1540
BseMII	CTCAG	4 cut(s)	540, 636, 776, 1187
BseNI	ACTGG	2 cut(s)	369, 585
BseRI	GAGGAG	1 cut(s)	1415
BsgI	GTGCAG	1 cut(s)	1026
Bsh1236I	CGCG	1 cut(s)	1257
BshNI	GGYRCC	2 cut(s)	241, 538
BsiHKAI	GWGCWC	1 cut(s)	527
BsiHKCI	CYCGRG	1 cut(s)	1697
BsiSI	CCGG	3 cut(s)	297, 811, 948
BslI	CCNNNNNNNGG	2 cut(s)	905, 931
BsoBI	CYCGRG	1 cut(s)	1697
Bsp1286I	GDGCHC	2 cut(s)	527, 1625
Bsp143I	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
BspACI	CCGC	3 cut(s)	1069, 1257, 1471
BspCNI	CTCAG	4 cut(s)	539, 637, 775, 1186
BspFNI	CGCG	1 cut(s)	1257
BspLI	GGNNCC	3 cut(s)	243, 379, 540
BspPI	GGATC	5 cut(s)	272, 705, 1252, 1284, 1383
BspQI	GCTCTTC	1 cut(s)	89
BspT107I	GGYRCC	2 cut(s)	241, 538
BsrDI	GCAATG	3 cut(s)	710, 1171, 1540
BsrFI	RCCGGY	1 cut(s)	296
BsrI	ACTGG	2 cut(s)	369, 585
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	6 cut(s)	144, 245, 798, 1220, 1493, 1706
BssMI	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
BssNI	GRCGYC	1 cut(s)	242
BssT1I	CCWWGG	4 cut(s)	144, 245, 798, 1706
Bst2UI	CCWGG	2 cut(s)	1221, 1452
Bst4CI	ACNGT	5 cut(s)	163, 273, 338, 729, 1397
Bst6I	CTCTTC	2 cut(s)	89, 481
BstACI	GRCGYC	1 cut(s)	242
BstBAI	YACGTR	1 cut(s)	1339
BstC8I	GCNNGC	2 cut(s)	298, 1657
BstDEI	CTNAG	5 cut(s)	526, 645, 762, 1173, 1367
BstDSI	CCRYGG	1 cut(s)	1493
BstF5I	GGATG	3 cut(s)	574, 719, 1297
BstFNI	CGCG	1 cut(s)	1257
BstH2I	RGCGCY	1 cut(s)	245
BstHHI	GCGC	4 cut(s)	244, 1467, 1516, 1655
BstKTI	GATC	8 cut(s)	19, 280, 700, 818, 1084, 1247, 1279, 1378
BstMBI	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
BstMWI	GCNNNNNNNGC	1 cut(s)	248
BstNI	CCWGG	2 cut(s)	1221, 1452
BstSCI	CCNGG	3 cut(s)	947, 1219, 1450
BstSFI	CTRYAG	3 cut(s)	384, 509, 1193
BstSNI	TACGTA	1 cut(s)	1339
BstUI	CGCG	1 cut(s)	1257
BstV2I	GAAGAC	1 cut(s)	573
BstX2I	RGATCY	4 cut(s)	16, 815, 1276, 1375
BstXI	CCANNNNNNTGG	1 cut(s)	238
BstYI	RGATCY	4 cut(s)	16, 815, 1276, 1375
BtgI	CCRYGG	1 cut(s)	1493
BtgZI	GCGATG	1 cut(s)	819
BtsCI	GGATG	3 cut(s)	574, 719, 1297
BtsI	GCAGTG	1 cut(s)	466
BtsIMutI	CAGTG	4 cut(s)	466, 592, 600, 1402
Cac8I	GCNNGC	2 cut(s)	298, 1657
CaiI	CAGNNNCTG	2 cut(s)	364, 1040
CfoI	GCGC	4 cut(s)	244, 1467, 1516, 1655
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	3 cut(s)	367, 880, 1031
CseI	GACGC	1 cut(s)	1263
Csp6I	GTAC	7 cut(s)	494, 539, 553, 730, 992, 1389, 1407
CspCI	CAANNNNNGTGG	2 cut(s)	726, 761
CviAII	CATG	2 cut(s)	301, 1642
CviQI	GTAC	7 cut(s)	494, 539, 553, 730, 992, 1389, 1407
DdeI	CTNAG	5 cut(s)	526, 645, 762, 1173, 1367
DinI	GGCGCC	1 cut(s)	243
DpnI	GATC	8 cut(s)	18, 279, 699, 817, 1083, 1246, 1278, 1377
DpnII	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
DraI	TTTAAA	2 cut(s)	481, 1350
DraIII	CACNNNGTG	1 cut(s)	1397
Eam1104I	CTCTTC	2 cut(s)	89, 481
EarI	CTCTTC	2 cut(s)	89, 481
Ecl136II	GAGCTC	1 cut(s)	525
Eco105I	TACGTA	1 cut(s)	1339
Eco130I	CCWWGG	4 cut(s)	144, 245, 798, 1706
Eco24I	GRGCYC	2 cut(s)	527, 1625
Eco32I	GATATC	2 cut(s)	1144, 1480
Eco47I	GGWCC	3 cut(s)	367, 880, 1031
Eco53kI	GAGCTC	1 cut(s)	525
Eco57I	CTGAAG	2 cut(s)	564, 1106
Eco88I	CYCGRG	1 cut(s)	1697
EcoICRI	GAGCTC	1 cut(s)	525
EcoRI	GAATTC	2 cut(s)	649, 1155
EcoRII	CCWGG	2 cut(s)	1219, 1450
EcoRV	GATATC	2 cut(s)	1144, 1480
EcoT14I	CCWWGG	4 cut(s)	144, 245, 798, 1706
EcoT22I	ATGCAT	1 cut(s)	1510
EcoT38I	GRGCYC	2 cut(s)	527, 1625
EgeI	GGCGCC	1 cut(s)	243
EheI	GGCGCC	1 cut(s)	243
ErhI	CCWWGG	4 cut(s)	144, 245, 798, 1706
FaeI	CATG	2 cut(s)	304, 1645
FalI	AAGNNNNNCTT	4 cut(s)	83, 115, 1670, 1702
FatI	CATG	2 cut(s)	300, 1641
FauI	CCCGC	1 cut(s)	1250
FblI	GTMKAC	3 cut(s)	1189, 1422, 1488
FokI	GGATG	3 cut(s)	581, 706, 1284
FriOI	GRGCYC	2 cut(s)	527, 1625
FspBI	CTAG	1 cut(s)	1565
GlaI	GCGC	4 cut(s)	243, 1466, 1515, 1654
GsuI	CTGGAG	1 cut(s)	1224
HaeII	RGCGCY	1 cut(s)	245
HapII	CCGG	3 cut(s)	297, 811, 948
HgaI	GACGC	1 cut(s)	1263
HhaI	GCGC	4 cut(s)	244, 1467, 1516, 1655
Hin1I	GRCGYC	1 cut(s)	242
Hin1II	CATG	2 cut(s)	304, 1645
Hin6I	GCGC	4 cut(s)	242, 1465, 1514, 1653
HinP1I	GCGC	4 cut(s)	242, 1465, 1514, 1653
HincII	GTYRAC	2 cut(s)	1423, 1634
HindII	GTYRAC	2 cut(s)	1423, 1634
HindIII	AAGCTT	4 cut(s)	169, 776, 1263, 1657
HinfI	GANTC	5 cut(s)	327, 874, 1412, 1571, 1581
HpaII	CCGG	3 cut(s)	297, 811, 948
HphI	GGTGA	3 cut(s)	542, 645, 717
Hpy166II	GTNNAC	8 cut(s)	269, 319, 1190, 1228, 1391, 1423, 1489, 1634
Hpy188I	TCNGA	2 cut(s)	765, 1086
Hpy8I	GTNNAC	8 cut(s)	269, 319, 1190, 1228, 1391, 1423, 1489, 1634
Hpy99I	CGWCG	1 cut(s)	342
HpyCH4III	ACNGT	5 cut(s)	163, 273, 338, 729, 1397
HpyCH4IV	ACGT	2 cut(s)	1186, 1338
HpyCH4V	TGCA	7 cut(s)	346, 448, 715, 919, 1043, 1443, 1508
HpyF10VI	GCNNNNNNNGC	1 cut(s)	248
HpyF3I	CTNAG	5 cut(s)	526, 645, 762, 1173, 1367
HpySE526I	ACGT	2 cut(s)	1186, 1338
Hsp92I	GRCGYC	1 cut(s)	242
Hsp92II	CATG	2 cut(s)	304, 1645
HspAI	GCGC	4 cut(s)	242, 1465, 1514, 1653
KasI	GGCGCC	1 cut(s)	241
KpnI	GGTACC	1 cut(s)	542
KroI	GCCGGC	1 cut(s)	296
KroNI	GCCGGC	1 cut(s)	298
Kzo9I	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
LguI	GCTCTTC	1 cut(s)	89
LmnI	GCTCC	2 cut(s)	377, 967
LweI	GCATC	2 cut(s)	559, 1106
MaeI	CTAG	1 cut(s)	1565
MaeII	ACGT	2 cut(s)	1186, 1338
MaeIII	GTNAC	4 cut(s)	397, 409, 703, 940
MalI	GATC	8 cut(s)	18, 279, 699, 817, 1083, 1246, 1278, 1377
MboI	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
MboII	GAAGA	6 cut(s)	106, 498, 557, 573, 1099, 1220
MflI	RGATCY	4 cut(s)	16, 815, 1276, 1375
MhlI	GDGCHC	2 cut(s)	527, 1625
Mly113I	GGCGCC	1 cut(s)	242
MlyI	GAGTC	2 cut(s)	336, 883
MmeI	TCCRAC	1 cut(s)	945
Mph1103I	ATGCAT	1 cut(s)	1510
MroNI	GCCGGC	1 cut(s)	296
MseI	TTAA	6 cut(s)	36, 480, 888, 1103, 1127, 1349
MslI	CAYNNNNRTG	1 cut(s)	1302
MspI	CCGG	3 cut(s)	297, 811, 948
MspR9I	CCNGG	3 cut(s)	949, 1221, 1452
MvaI	CCWGG	2 cut(s)	1221, 1452
MvnI	CGCG	1 cut(s)	1257
MwoI	GCNNNNNNNGC	1 cut(s)	248
NaeI	GCCGGC	1 cut(s)	298
NarI	GGCGCC	1 cut(s)	242
NciI	CCSGG	1 cut(s)	949
NdeII	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
NgoMIV	GCCGGC	1 cut(s)	296
NlaIII	CATG	2 cut(s)	304, 1645
NlaIV	GGNNCC	3 cut(s)	243, 379, 540
NmuCI	GTSAC	3 cut(s)	409, 703, 940
NsiI	ATGCAT	1 cut(s)	1510
PciSI	GCTCTTC	1 cut(s)	89
PdiI	GCCGGC	1 cut(s)	298
PfeI	GAWTC	3 cut(s)	1412, 1571, 1581
PfoI	TCCNGGA	1 cut(s)	1450
PleI	GAGTC	2 cut(s)	335, 882
PluTI	GGCGCC	1 cut(s)	245
PpsI	GAGTC	2 cut(s)	335, 882
Ppu21I	YACGTR	1 cut(s)	1339
PsiI	TTATAA	1 cut(s)	1289
Psp124BI	GAGCTC	1 cut(s)	527
Psp6I	CCWGG	2 cut(s)	1219, 1450
PspGI	CCWGG	2 cut(s)	1219, 1450
PspN4I	GGNNCC	3 cut(s)	243, 379, 540
PspPI	GGNCC	3 cut(s)	367, 880, 1031
PsrI	GAACNNNNNNTAC	2 cut(s)	1176, 1208
PstNI	CAGNNNCTG	2 cut(s)	364, 1040
PsuI	RGATCY	4 cut(s)	16, 815, 1276, 1375
RsaI	GTAC	7 cut(s)	495, 540, 554, 731, 993, 1390, 1408
RsaNI	GTAC	7 cut(s)	494, 539, 553, 730, 992, 1389, 1407
RseI	CAYNNNNRTG	1 cut(s)	1302
SacI	GAGCTC	1 cut(s)	527
SalI	GTCGAC	1 cut(s)	1421
SapI	GCTCTTC	1 cut(s)	89
SaqAI	TTAA	6 cut(s)	36, 480, 888, 1103, 1127, 1349
Sau3AI	GATC	8 cut(s)	16, 277, 697, 815, 1081, 1244, 1276, 1375
Sau96I	GGNCC	3 cut(s)	367, 880, 1031
SchI	GAGTC	2 cut(s)	336, 883
ScrFI	CCNGG	3 cut(s)	949, 1221, 1452
SduI	GDGCHC	2 cut(s)	527, 1625
SfaNI	GCATC	2 cut(s)	559, 1106
SfcI	CTRYAG	3 cut(s)	384, 509, 1193
SfoI	GGCGCC	1 cut(s)	243
SinI	GGWCC	3 cut(s)	367, 880, 1031
SmiMI	CAYNNNNRTG	1 cut(s)	1302
SmlI	CTYRAG	3 cut(s)	115, 151, 520
SmoI	CTYRAG	3 cut(s)	115, 151, 520
SnaBI	TACGTA	1 cut(s)	1339
SsiI	CCGC	3 cut(s)	1069, 1257, 1471
SspDI	GGCGCC	1 cut(s)	241
SspI	AATATT	2 cut(s)	787, 1133
SspMI	CTAG	1 cut(s)	1565
SstI	GAGCTC	1 cut(s)	527
StyD4I	CCNGG	3 cut(s)	947, 1219, 1450
StyI	CCWWGG	4 cut(s)	144, 245, 798, 1706
TaaI	ACNGT	5 cut(s)	163, 273, 338, 729, 1397
TaiI	ACGT	2 cut(s)	1189, 1341
TaqI	TCGA	2 cut(s)	340, 1422
TaqII	GACCGA	1 cut(s)	1619
TatI	WGTACW	2 cut(s)	493, 1388
TfiI	GAWTC	3 cut(s)	1412, 1571, 1581
Tru1I	TTAA	6 cut(s)	36, 480, 888, 1103, 1127, 1349
Tru9I	TTAA	6 cut(s)	36, 480, 888, 1103, 1127, 1349
TscAI	CASTG	4 cut(s)	466, 592, 607, 1402
TseFI	GTSAC	3 cut(s)	409, 703, 940
Tsp45I	GTSAC	3 cut(s)	409, 703, 940
TspDTI	ATGAA	6 cut(s)	54, 443, 624, 999, 1107, 1373
TspGWI	ACGGA	1 cut(s)	300
TspRI	CASTG	4 cut(s)	466, 592, 607, 1402
VpaK11BI	GGWCC	3 cut(s)	367, 880, 1031
XapI	RAATTY	6 cut(s)	8, 562, 649, 1108, 1155, 1664
XmiI	GTMKAC	3 cut(s)	1189, 1422, 1488
XspI	CTAG	1 cut(s)	1565
Zsp2I	ATGCAT	1 cut(s)	1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.