Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004762

Physical Location & Seq

Genomic Coordinates Forward (+)

2159240 .. 2163165

Gene Structure 3926 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005822

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGCGCCAAAAAAGGCAACCAGAGGTGAAAGTCCTCCACCGTCCGATCCTCACGGAATCTTCGCCGGAATGGTCGTCTTCTTAGTCGAAGACGGAGTTCAGAACCGTCGCTTACAGATTTGGAAGCAAAAACTGCTTCAAATGGGAGCTACTATAGAAGACCATCTATCCAAAAGGGTCACACACATGTTTGCGATGAACCCAGAAGCCCTCTTGCAAAAAGTGGGCAGTGATCAGTGGGGTCTCTTTAGAGGAAGAGTTGTACTCTATCAGTGGCTAGAGGACAGCTTGAGCTCAGGGAAGAGAGTAGCAGAAGATTTGTACCATCTGAAATTGGAGTCAGACAAGTCTTCTAGTGATTACATTTCCAGTGATGAAGAAACCCCAAAACCGAAAAGGCAAAGATCCTCATCTCCTGATGAGTTGCCTTATACTCCGAGCCCCAAAACCCCTAAAGCCCCAAATAAGGATCAGGTCACAGCATTGCAGTCATCCACGCCCTACAGCCCACCTGATTTAAACAAAGACATAACCCAGACATTTGGGAAGCTTATCAACATATATAGAGCATTGGGCGATGACCGAAGATCTTTTAGCTATTACAAGGCTATAACAGTTATAGAGAAGTTGCCTTTCAAGATTCAAAGTCCAGAACAAGTTAAGGGCCTCCCGGGCATTGGAAAGTCAATGCAAGATCATATTCAAGAGATAGTGACTACCGGAAAGCTATCCAAGTTGGAGCACTTTGAAACAGATGAAAAGTTTGAATGGCAGAACTCAATATCTGAGCTAACTATGAGTAAAAACAACAGCTTATTCGAGGAAATTTGGGGTGTAGGTCCAGCTACTGCACTAAAATTATTTGAAAAAGGACATCGCACATTAGATGATTTGAAGAATGAAGATTCGTTGACACATTCACAGAAGTTGGGGTTAAGATATTATGAGGATATCAAACAGAGGATCCCACGGCATGAGGCTCAAGAGATGGAACTTCTTCTACAAAAAGCCGCAGAGGATGTTTTGCCTGGGGTGGTTGTTGTATGTGGAGGGTCATATAGACGCGGGAAATCATCTTGTGGGGATCTGGACATTGTAATTACTCATCCAGATGGGAACAGTCATAAAGGTTTTTTACCAAAGTATGTAAAGCATCTAAAGGATATGAAGTTCCTAAGGGAGGATTTGGTTTTCGTTACACACAGCGAGGAGGGTACTGATTCTGGTGTCGACACATATTTTGGGCTTTGTACATATCCTGGACGAGAGCTGCGGCACCGCATAGATTTCAAGGTCTACCCGCGGGACATATATGCATTTGGACTGATAGCTTGGACAGGGAATGATGTGCTGAATAGGAGGTTGAGGTTACTAGCTGAATCTAAAGGATTCCGACTTGACGATACGGGGCTGTTTCCAGCCACTCATGGATCTGGCGGAAAACGGGGGGCAAAAGCTGGCGCAAGTTTGAAATTTGACACAGAAAAGGAGGTCTTTGACTTTCTCGGGTTTCCTTGGCTTGAACCACATGAGAGAAATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006287 GO:0006289 GO:0006302 GO:0006303 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0016740 GO:0016772 GO:0016779 GO:0016829 GO:0016835 GO:0018130 GO:0019438 GO:0030145 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051575 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097510 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko03450 map03410 map03450

Pfam Domains

Protein Families

BRCT DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 LIM

Protein Analysis

515

Amino Acids

58.2

Weight (kDa)

7.28

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HHH_8	PF14716	174 - 243	7.9e-16	Helix-hairpin-helix domain
DNA_pol_lambd_f	PF10391	272 - 318	1.3e-19	Fingers domain of DNA polymerase lambda
DNA_pol_B_palm	PF14792	321 - 435	9.3e-30	DNA polymerase beta palm
DNA_pol_B_thumb	PF14791	442 - 513	8e-20	DNA polymerase beta thumb

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10520 AT1G10520
fragaria_vesca	FvH4_4g35010 FvH4_4g35030
malus_domestica	MD16G1086600.v1.1 MD16G1086700.v1.1
prunus_persica	Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1
pyrus_communis	pycom16g07470
rosa_chinensis	RchiOBHm_Chr4g0444541 RchiOBHm_Chr4g0444551
rosa_laevigata	RLG00000005822 RLG00000005825
rosa_multiflora	Rmu_sc0003839.1_g000005 Rmu_sc0012648.1_g000007
rosa_roxburghii	Rroxscaffold_5G00385000 Rroxscaffold_5G00385010
rosa_rugosa	Rorug04G0353500 Rorug04G0353600 Rorug04G0353700 Rorug04G0353800
rosa_samantha	Rh4AG413800 Rh4BG425500 Rh4CG439900 Rh4CG440200 Rh4DG420800 Rh4DG421100
rosa_wichuraiana	Rw4G035540 Rw4G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	4, 1275
AccI	GTMKAC	2 cut(s)	1230, 1296
AccII	CGCG	2 cut(s)	1065, 1303
AciI	CCGC	7 cut(s)	1011, 1065, 1273, 1279, 1301, 1303, 1437
AclWI	GGATC	7 cut(s)	41, 399, 477, 958, 971, 1092, 1438
AcsI	RAATTY	2 cut(s)	825, 1472
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	4 cut(s)	264, 323, 1216, 1252
AfiI	CCNNNNNNNGG	3 cut(s)	466, 677, 1180
AflIII	ACRYGT	1 cut(s)	186
AjnI	CCWGG	2 cut(s)	1027, 1258
AloI	GAACNNNNNNTCC	2 cut(s)	1154, 1186
Alw21I	GWGCWC	2 cut(s)	296, 744
Alw26I	GTCTC	1 cut(s)	248
AlwI	GGATC	7 cut(s)	41, 399, 477, 958, 971, 1092, 1438
AlwNI	CAGNNNCTG	1 cut(s)	848
Ama87I	CYCGRG	2 cut(s)	670, 1505
AoxI	GGCC	1 cut(s)	664
ApeKI	GCWGC	1 cut(s)	1270
ApoI	RAATTY	2 cut(s)	825, 1472
ArsI	GACNNNNNNTTYG	2 cut(s)	1223, 1255
Asp700I	GAANNNNTTC	1 cut(s)	996
AspLEI	GCGC	2 cut(s)	7, 1463
AspS9I	GGNCC	2 cut(s)	664, 839
AsuC2I	CCSGG	2 cut(s)	671, 672
AsuHPI	GGTGA	1 cut(s)	38
AvaI	CYCGRG	2 cut(s)	670, 1505
AvaII	GGWCC	1 cut(s)	839
AxyI	CCTNAGG	1 cut(s)	1175
BamHI	GGATCC	1 cut(s)	963
BanI	GGYRCC	2 cut(s)	4, 1275
BanII	GRGCYC	2 cut(s)	296, 443
BbsI	GAAGAC	4 cut(s)	70, 96, 165, 342
Bbv12I	GWGCWC	2 cut(s)	296, 744
BbvI	GCAGC	1 cut(s)	1257
BccI	CCATC	4 cut(s)	171, 333, 982, 1106
BceAI	ACGGC	1 cut(s)	986
BciT130I	CCWGG	2 cut(s)	1029, 1260
BclI	TGATCA	1 cut(s)	232
BcnI	CCSGG	2 cut(s)	671, 672
BcoDI	GTCTC	1 cut(s)	248
BfaI	CTAG	3 cut(s)	278, 354, 1373
BfmI	CTRYAG	2 cut(s)	153, 502
BfoI	RGCGCY	1 cut(s)	8
BglI	GCCNNNNNGGC	1 cut(s)	672
BglII	AGATCT	1 cut(s)	587
BisI	GCNGC	3 cut(s)	1011, 1271, 1274
BlsI	GCNGC	3 cut(s)	1012, 1272, 1275
Bme1390I	CCNGG	4 cut(s)	671, 672, 1029, 1260
Bme18I	GGWCC	1 cut(s)	839
BmeT110I	CYCGRG	2 cut(s)	670, 1505
BmgT120I	GGNCC	2 cut(s)	664, 839
BmiI	GGNNCC	3 cut(s)	6, 965, 1277
BmrFI	CCNGG	4 cut(s)	671, 672, 1029, 1260
BmsI	GCATC	1 cut(s)	1162
BpiI	GAAGAC	4 cut(s)	70, 96, 165, 342
BplI	GAGNNNNNCTC	2 cut(s)	249, 281
Bpu10I	CCTNAGC	1 cut(s)	295
BpuEI	CTTGAG	2 cut(s)	310, 966
BpuMI	CCSGG	2 cut(s)	671, 672
BsaBI	GATNNNNATC	1 cut(s)	409
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	248
BsaJI	CCNNGG	5 cut(s)	670, 968, 1028, 1301, 1514
BsaWI	WCCGGW	1 cut(s)	719
Bsc4I	CCNNNNNNNGG	3 cut(s)	466, 677, 1180
Bse1I	ACTGG	1 cut(s)	369
Bse21I	CCTNAGG	1 cut(s)	1175
Bse3DI	GCAATG	1 cut(s)	482
Bse8I	GATNNNNATC	1 cut(s)	409
BseBI	CCWGG	2 cut(s)	1029, 1260
BseDI	CCNNGG	5 cut(s)	670, 968, 1028, 1301, 1514
BseGI	GGATG	3 cut(s)	491, 1024, 1105
BseJI	GATNNNNATC	1 cut(s)	409
BseLI	CCNNNNNNNGG	3 cut(s)	466, 677, 1180
BseMI	GCAATG	1 cut(s)	482
BseMII	CTCAG	2 cut(s)	309, 777
BseNI	ACTGG	1 cut(s)	369
BseRI	GAGGAG	1 cut(s)	1223
BseXI	GCAGC	1 cut(s)	1257
BsgI	GTGCAG	1 cut(s)	834
Bsh1236I	CGCG	2 cut(s)	1065, 1303
BshFI	GGCC	1 cut(s)	666
BshNI	GGYRCC	2 cut(s)	4, 1275
BsiHKAI	GWGCWC	2 cut(s)	296, 744
BsiHKCI	CYCGRG	2 cut(s)	670, 1505
BsiSI	CCGG	3 cut(s)	66, 671, 720
BslFI	GGGAC	1 cut(s)	1319
BslI	CCNNNNNNNGG	3 cut(s)	466, 677, 1180
BsmAI	GTCTC	1 cut(s)	248
BsmFI	GGGAC	1 cut(s)	1319
BsnI	GGCC	1 cut(s)	666
Bso31I	GGTCTC	1 cut(s)	248
BsoBI	CYCGRG	2 cut(s)	670, 1505
Bsp1286I	GDGCHC	3 cut(s)	296, 443, 744
Bsp1407I	TGTACA	1 cut(s)	1250
Bsp143I	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
BspACI	CCGC	7 cut(s)	1011, 1065, 1273, 1279, 1301, 1303, 1437
BspANI	GGCC	1 cut(s)	666
BspCNI	CTCAG	2 cut(s)	308, 778
BspFNI	CGCG	2 cut(s)	1065, 1303
BspLI	GGNNCC	3 cut(s)	6, 965, 1277
BspPI	GGATC	7 cut(s)	41, 399, 477, 958, 971, 1092, 1438
BspT107I	GGYRCC	2 cut(s)	4, 1275
BspTNI	GGTCTC	1 cut(s)	248
BsrDI	GCAATG	1 cut(s)	482
BsrGI	TGTACA	1 cut(s)	1250
BsrI	ACTGG	1 cut(s)	369
BssECI	CCNNGG	5 cut(s)	670, 968, 1028, 1301, 1514
BssMI	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	1514
Bst2UI	CCWGG	2 cut(s)	1029, 1260
Bst4CI	ACNGT	4 cut(s)	42, 107, 616, 1121
Bst6I	CTCTTC	2 cut(s)	250, 296
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	133
BstAUI	TGTACA	1 cut(s)	1250
BstC8I	GCNNGC	1 cut(s)	1459
BstDEI	CTNAG	4 cut(s)	82, 295, 786, 1175
BstDSI	CCRYGG	2 cut(s)	968, 1301
BstENI	CCTNNNNNAGG	1 cut(s)	1178
BstF5I	GGATG	3 cut(s)	491, 1024, 1105
BstFNI	CGCG	2 cut(s)	1065, 1303
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 1463
BstKTI	GATC	9 cut(s)	49, 235, 407, 472, 590, 697, 966, 1087, 1433
BstMAI	GTCTC	1 cut(s)	248
BstMBI	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
BstMWI	GCNNNNNNNGC	2 cut(s)	133, 672
BstNI	CCWGG	2 cut(s)	1029, 1260
BstNSI	RCATGY	1 cut(s)	190
BstSCI	CCNGG	4 cut(s)	669, 670, 1027, 1258
BstSFI	CTRYAG	2 cut(s)	153, 502
BstUI	CGCG	2 cut(s)	1065, 1303
BstV1I	GCAGC	1 cut(s)	1257
BstV2I	GAAGAC	4 cut(s)	70, 96, 165, 342
BstX2I	RGATCY	5 cut(s)	404, 587, 963, 1084, 1430
BstXI	CCANNNNNNTGG	1 cut(s)	542
BstYI	RGATCY	5 cut(s)	404, 587, 963, 1084, 1430
Bsu36I	CCTNAGG	1 cut(s)	1175
BsuRI	GGCC	1 cut(s)	666
BtgI	CCRYGG	2 cut(s)	968, 1301
BtgZI	GCGATG	3 cut(s)	209, 591, 860
BtsCI	GGATG	3 cut(s)	491, 1024, 1105
BtsI	GCAGTG	1 cut(s)	235
BtsIMutI	CAGTG	4 cut(s)	235, 242, 278, 376
Cac8I	GCNNGC	1 cut(s)	1459
CaiI	CAGNNNCTG	1 cut(s)	848
CfoI	GCGC	2 cut(s)	7, 1463
Cfr13I	GGNCC	2 cut(s)	664, 839
Cfr42I	CCGCGG	1 cut(s)	1304
Cfr9I	CCCGGG	1 cut(s)	670
CseI	GACGC	1 cut(s)	1071
Csp6I	GTAC	4 cut(s)	263, 322, 1215, 1251
CviAII	CATG	4 cut(s)	187, 974, 1427, 1529
CviQI	GTAC	4 cut(s)	263, 322, 1215, 1251
DdeI	CTNAG	4 cut(s)	82, 295, 786, 1175
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	9 cut(s)	48, 234, 406, 471, 589, 696, 965, 1086, 1432
DpnII	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
DraI	TTTAAA	1 cut(s)	519
Eam1104I	CTCTTC	2 cut(s)	250, 296
EarI	CTCTTC	2 cut(s)	250, 296
EciI	GGCGGA	1 cut(s)	1452
Ecl136II	GAGCTC	1 cut(s)	294
Eco130I	CCWWGG	1 cut(s)	1514
Eco24I	GRGCYC	2 cut(s)	296, 443
Eco31I	GGTCTC	1 cut(s)	248
Eco32I	GATATC	1 cut(s)	952
Eco47I	GGWCC	1 cut(s)	839
Eco53kI	GAGCTC	1 cut(s)	294
Eco81I	CCTNAGG	1 cut(s)	1175
Eco88I	CYCGRG	2 cut(s)	670, 1505
EcoICRI	GAGCTC	1 cut(s)	294
EcoNI	CCTNNNNNAGG	1 cut(s)	1178
EcoO109I	RGGNCCY	1 cut(s)	664
EcoRII	CCWGG	2 cut(s)	1027, 1258
EcoRV	GATATC	1 cut(s)	952
EcoT14I	CCWWGG	1 cut(s)	1514
EcoT22I	ATGCAT	1 cut(s)	1318
EcoT38I	GRGCYC	2 cut(s)	296, 443
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	1514
FaeI	CATG	4 cut(s)	190, 977, 1430, 1532
FalI	AAGNNNNNCTT	2 cut(s)	1478, 1510
FaqI	GGGAC	1 cut(s)	1319
FatI	CATG	4 cut(s)	186, 973, 1426, 1528
FauI	CCCGC	3 cut(s)	1058, 1296, 1308
FbaI	TGATCA	1 cut(s)	232
FblI	GTMKAC	2 cut(s)	1230, 1296
Fnu4HI	GCNGC	3 cut(s)	1011, 1271, 1274
FokI	GGATG	3 cut(s)	478, 1031, 1092
FriOI	GRGCYC	2 cut(s)	296, 443
Fsp4HI	GCNGC	3 cut(s)	1011, 1271, 1274
FspBI	CTAG	3 cut(s)	278, 354, 1373
GlaI	GCGC	2 cut(s)	6, 1462
GluI	GCNGC	3 cut(s)	1011, 1271, 1274
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	1 cut(s)	666
HapII	CCGG	3 cut(s)	66, 671, 720
HgaI	GACGC	1 cut(s)	1071
HhaI	GCGC	2 cut(s)	7, 1463
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	4 cut(s)	190, 977, 1430, 1532
Hin6I	GCGC	2 cut(s)	5, 1461
HinP1I	GCGC	2 cut(s)	5, 1461
HincII	GTYRAC	2 cut(s)	912, 1231
HindII	GTYRAC	2 cut(s)	912, 1231
HindIII	AAGCTT	1 cut(s)	548
HinfI	GANTC	7 cut(s)	57, 338, 640, 905, 1220, 1379, 1389
HpaII	CCGG	3 cut(s)	66, 671, 720
HphI	GGTGA	1 cut(s)	38
Hpy166II	GTNNAC	3 cut(s)	912, 1231, 1297
Hpy188I	TCNGA	7 cut(s)	46, 102, 330, 343, 438, 787, 1394
Hpy188III	TCNNGA	7 cut(s)	416, 637, 650, 704, 983, 1088, 1109
Hpy8I	GTNNAC	3 cut(s)	912, 1231, 1297
Hpy99I	CGWCG	1 cut(s)	111
HpyCH4III	ACNGT	4 cut(s)	42, 107, 616, 1121
HpyCH4V	TGCA	5 cut(s)	217, 487, 691, 851, 1316
HpyF10VI	GCNNNNNNNGC	2 cut(s)	133, 672
HpyF3I	CTNAG	4 cut(s)	82, 295, 786, 1175
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	4 cut(s)	190, 977, 1430, 1532
HspAI	GCGC	2 cut(s)	5, 1461
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	232
KspI	CCGCGG	1 cut(s)	1304
Kzo9I	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
LmnI	GCTCC	2 cut(s)	146, 739
Lsp1109I	GCAGC	1 cut(s)	1257
LweI	GCATC	1 cut(s)	1162
MaeI	CTAG	3 cut(s)	278, 354, 1373
MaeIII	GTNAC	5 cut(s)	178, 475, 712, 1195, 1368
MalI	GATC	9 cut(s)	48, 234, 406, 471, 589, 696, 965, 1086, 1432
MboI	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
MflI	RGATCY	5 cut(s)	404, 587, 963, 1084, 1430
MhlI	GDGCHC	3 cut(s)	296, 443, 744
MluCI	AATT	5 cut(s)	332, 825, 857, 1098, 1472
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	347
MmeI	TCCRAC	2 cut(s)	717, 1417
Mph1103I	ATGCAT	1 cut(s)	1318
MroXI	GAANNNNTTC	1 cut(s)	996
MseI	TTAA	3 cut(s)	518, 660, 935
MslI	CAYNNNNRTG	2 cut(s)	185, 1110
MspA1I	CMGCKG	1 cut(s)	1303
MspI	CCGG	3 cut(s)	66, 671, 720
MspR9I	CCNGG	4 cut(s)	671, 672, 1029, 1260
MvaI	CCWGG	2 cut(s)	1029, 1260
MvnI	CGCG	2 cut(s)	1065, 1303
MwoI	GCNNNNNNNGC	2 cut(s)	133, 672
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	2 cut(s)	671, 672
NdeII	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
NlaIII	CATG	4 cut(s)	190, 977, 1430, 1532
NlaIV	GGNNCC	3 cut(s)	6, 965, 1277
NmuCI	GTSAC	3 cut(s)	178, 475, 712
NsiI	ATGCAT	1 cut(s)	1318
NspI	RCATGY	1 cut(s)	190
PciI	ACATGT	1 cut(s)	186
PdmI	GAANNNNTTC	1 cut(s)	996
PfeI	GAWTC	6 cut(s)	57, 640, 905, 1220, 1379, 1389
PfoI	TCCNGGA	1 cut(s)	1258
PkrI	GCNGC	3 cut(s)	1012, 1272, 1275
PleI	GAGTC	1 cut(s)	346
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	1 cut(s)	346
PscI	ACATGT	1 cut(s)	186
Psp124BI	GAGCTC	1 cut(s)	296
Psp6I	CCWGG	2 cut(s)	1027, 1258
PspGI	CCWGG	2 cut(s)	1027, 1258
PspN4I	GGNNCC	3 cut(s)	6, 965, 1277
PspPI	GGNCC	2 cut(s)	664, 839
PsrI	GAACNNNNNNTAC	2 cut(s)	984, 1016
PstNI	CAGNNNCTG	1 cut(s)	848
PsuI	RGATCY	5 cut(s)	404, 587, 963, 1084, 1430
RsaI	GTAC	4 cut(s)	264, 323, 1216, 1252
RsaNI	GTAC	4 cut(s)	263, 322, 1215, 1251
RseI	CAYNNNNRTG	2 cut(s)	185, 1110
SacI	GAGCTC	1 cut(s)	296
SacII	CCGCGG	1 cut(s)	1304
SalI	GTCGAC	1 cut(s)	1229
SaqAI	TTAA	3 cut(s)	518, 660, 935
SatI	GCNGC	3 cut(s)	1011, 1271, 1274
Sau3AI	GATC	9 cut(s)	46, 232, 404, 469, 587, 694, 963, 1084, 1430
Sau96I	GGNCC	2 cut(s)	664, 839
SchI	GAGTC	1 cut(s)	347
ScrFI	CCNGG	4 cut(s)	671, 672, 1029, 1260
SduI	GDGCHC	3 cut(s)	296, 443, 744
SfaNI	GCATC	1 cut(s)	1162
SfcI	CTRYAG	2 cut(s)	153, 502
SfoI	GGCGCC	1 cut(s)	6
Sfr303I	CCGCGG	1 cut(s)	1304
SgrBI	CCGCGG	1 cut(s)	1304
SinI	GGWCC	1 cut(s)	839
SmaI	CCCGGG	1 cut(s)	672
SmiMI	CAYNNNNRTG	2 cut(s)	185, 1110
SmlI	CTYRAG	2 cut(s)	289, 981
SmoI	CTYRAG	2 cut(s)	289, 981
Sse9I	AATT	5 cut(s)	332, 825, 857, 1098, 1472
SsiI	CCGC	7 cut(s)	1011, 1065, 1273, 1279, 1301, 1303, 1437
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	3 cut(s)	278, 354, 1373
SstI	GAGCTC	1 cut(s)	296
StyD4I	CCNGG	4 cut(s)	669, 670, 1027, 1258
StyI	CCWWGG	1 cut(s)	1514
TaaI	ACNGT	4 cut(s)	42, 107, 616, 1121
TaqI	TCGA	3 cut(s)	87, 819, 1230
TaqII	GACCGA	1 cut(s)	597
TasI	AATT	5 cut(s)	332, 825, 857, 1098, 1472
TatI	WGTACW	2 cut(s)	262, 1250
TauI	GCSGC	2 cut(s)	1013, 1276
TfiI	GAWTC	6 cut(s)	57, 640, 905, 1220, 1379, 1389
Tru1I	TTAA	3 cut(s)	518, 660, 935
Tru9I	TTAA	3 cut(s)	518, 660, 935
TscAI	CASTG	4 cut(s)	235, 242, 278, 376
TseFI	GTSAC	3 cut(s)	178, 475, 712
TseI	GCWGC	1 cut(s)	1270
Tsp45I	GTSAC	3 cut(s)	178, 475, 712
TspDTI	ATGAA	5 cut(s)	212, 390, 771, 915, 1181
TspGWI	ACGGA	2 cut(s)	69, 108
TspMI	CCCGGG	1 cut(s)	670
TspRI	CASTG	4 cut(s)	235, 242, 278, 376
VpaK11BI	GGWCC	1 cut(s)	839
XagI	CCTNNNNNAGG	1 cut(s)	1178
XapI	RAATTY	2 cut(s)	825, 1472
XceI	RCATGY	1 cut(s)	190
XmaI	CCCGGG	1 cut(s)	670
XmiI	GTMKAC	2 cut(s)	1230, 1296
XmnI	GAANNNNTTC	1 cut(s)	996
XspI	CTAG	3 cut(s)	278, 354, 1373
Zsp2I	ATGCAT	1 cut(s)	1318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.