Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004762

Physical Location & Seq

Genomic Coordinates Reverse (-)

65242654 .. 65247013

Gene Structure 4360 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41219

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGCTCTGGTGTGTTCCTAAGACACGCGTCCTCCACCGATCAGGATTGCTGATCAGAAGTAAAACAGTAAAAATGACTTCGCCTTTGTTGCACAACCGAAACCAAGTAATGGCGCCAAAAAAGGCAACCAGAGATGAAAGTCCTCCACCGTCCGATCCTCACGGAATCTTCGCCGGAATGGTCGTCTTCTTAGTCGAAGACGGAGTTCAGAACCGTCGCTTACAGGTTTGGAAGCAAAAACTGGTTCAAATGGGAGCTACTATAGAAGACCATCTATCCAAAAGGGTCACACACATATTTGCTATGAACCCAGAAGCCCTTTTGCAAAAAGTGGGCAGTGATCAACGGGGTCTCTTTAAAGGAAGAGTTGTACTCTATCAGTGGCTAGAGGACAGCTTGAGCTCAGGGAAGAGAGTACCAGAAGATTTGTACCATCTGAAATTGGAGTCAGATAAGTCTTCTAGTGATTACATTTCCAGTGATGAAGAAACCCCAAAACTGAAAAGGCGAAGATCCTCATCTCCTGATGAGTTGCCTCATACTCCCAGCCCCAAAACCCCTAAAGCCCCAAATAAGGATCAGGTCACAGCATTGCAGTCATCCACGCCCTACAACCCACCTGATTTAAACAAAGACATAACCCAGATATTTGGGAAGCTTATCAACATATATAGAGCATTGGGCGATGACCGAAGATCTTTTAGCTACTACAAGGCTATAACAGTTATTGAGAAGTTGCCTTTCAAGATTCAAAGTGCAGAACAAGTTAAGGGCCTCCCGGGCATTGGAAAGTCAATGCAAGATCATATTCAAGAGATAGTGACTACCGGAAAGCTATCCAAGTTGGAGCACTTTGAAACAGATGAAAAGGTAAAAACAATCAGCTTATTCGAGGAAATATGGGGTGTAGGTCCAGCTACTGCACTAAAATTATTTGAGAAAGGACATCACACATTAGATGATTTGAAGAATGAAGATTCGTTGACACATTCACAGAAGTTGGGGTTAAGATATTATGAGGATATCAAACAGAGGATCCCACGGCATGAGGCTCAAGAGATGGAACTTCTTCTACAAAAAGCGGCAGAGGATGTTTTGCCTGGGGTGGTTGTTGTATGTGGAGGGTCATATAGACGCGGGAAATCTTCTTGTGGGGATCTGGACATTGTAATTACTCATCCAGATGGGAACAGGCATAAAGGTTTTTTACTGAAGTATGTAAAGCATCTAAAGGATATGAAGTTCCTAAGGGAGGATTTGGTTTTCGTTACACACAGCGAGGAGGGTACTGATTCTGGTGTCGACACATATTATGGGCTTTGTACATATCCTGGACGAGAGCTGCGGCACCGCATAGATTTCAAGGTCTACCCGCGGGACATATATGCATTTGGACTAATAGCTTGGACAGGGAATGATGTGCTGAATAGGAGGTTGAGGTTACTAGCTGAATCTAAAGGATTCCGGCTTGACGATACAGGGCTGTTTCCGGCCACTCATGGATCTGGCGGAAAACGGGGGGCAAAAGCTGGCGCAAGCTTGAAATTTGACACAGAAAAGGAGGTCTTTGACTTTCTCGGGTTTCCTTGGCTTGAACCACACGAGAGAAATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006287 GO:0006289 GO:0006302 GO:0006303 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0016740 GO:0016772 GO:0016779 GO:0016829 GO:0016835 GO:0018130 GO:0019438 GO:0030145 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051575 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097510 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko03450 map03410 map03450

Pfam Domains

Protein Families

BRCT DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 LIM

Protein Analysis

538

Amino Acids

61.02

Weight (kDa)

9.08

Isoelectric Point (pI)

49.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HHH_8	PF14716	210 - 279	6.1e-16	Helix-hairpin-helix domain
DNA_pol_lambd_f	PF10391	296 - 342	8.8e-19	Fingers domain of DNA polymerase lambda
DNA_pol_B_palm	PF14792	345 - 459	3.2e-29	DNA polymerase beta palm
DNA_pol_B_thumb	PF14791	466 - 537	8.6e-20	DNA polymerase beta thumb

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10520 AT1G10520
fragaria_vesca	FvH4_4g35010 FvH4_4g35030
malus_domestica	MD16G1086600.v1.1 MD16G1086700.v1.1
prunus_persica	Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1 Prupe.1G259900_v2.0.a1
pyrus_communis	pycom16g07470
rosa_chinensis	RchiOBHm_Chr4g0444541 RchiOBHm_Chr4g0444551
rosa_laevigata	RLG00000005822 RLG00000005825
rosa_multiflora	Rmu_sc0003839.1_g000005 Rmu_sc0012648.1_g000007
rosa_roxburghii	Rroxscaffold_5G00385000 Rroxscaffold_5G00385010
rosa_rugosa	Rorug04G0353500 Rorug04G0353600 Rorug04G0353700 Rorug04G0353800
rosa_samantha	Rh4AG413800 Rh4BG425500 Rh4CG439900 Rh4CG440200 Rh4DG420800 Rh4DG421100
rosa_wichuraiana	Rw4G035540 Rw4G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	112, 1347
AccB7I	CCANNNNNTGG	1 cut(s)	109
AccI	GTMKAC	2 cut(s)	1302, 1368
AccII	CGCG	3 cut(s)	27, 1137, 1375
AciI	CCGC	7 cut(s)	1082, 1137, 1345, 1351, 1373, 1375, 1509
AclWI	GGATC	7 cut(s)	149, 507, 585, 1030, 1043, 1164, 1510
AcoI	YGGCCR	1 cut(s)	1491
AcsI	RAATTY	1 cut(s)	1544
AcuI	CTGAAG	1 cut(s)	1232
AcyI	GRCGYC	1 cut(s)	113
AfaI	GTAC	5 cut(s)	372, 417, 431, 1288, 1324
AfiI	CCNNNNNNNGG	4 cut(s)	109, 574, 785, 1252
AflIII	ACRYGT	1 cut(s)	25
AgsI	TTSAA	9 cut(s)	248, 745, 752, 812, 857, 967, 1363, 1543, 1595
AjnI	CCWGG	2 cut(s)	1099, 1330
AloI	GAACNNNNNNTCC	2 cut(s)	1226, 1258
Alw21I	GWGCWC	2 cut(s)	404, 852
Alw26I	GTCTC	1 cut(s)	356
AlwI	GGATC	7 cut(s)	149, 507, 585, 1030, 1043, 1164, 1510
AlwNI	CAGNNNCTG	1 cut(s)	920
Ama87I	CYCGRG	2 cut(s)	778, 1577
AoxI	GGCC	2 cut(s)	772, 1491
ApeKI	GCWGC	1 cut(s)	1342
ApoI	RAATTY	1 cut(s)	1544
ArsI	GACNNNNNNTTYG	2 cut(s)	67, 99
Asp700I	GAANNNNTTC	1 cut(s)	1068
AspLEI	GCGC	2 cut(s)	115, 1535
AspS9I	GGNCC	2 cut(s)	772, 911
AsuC2I	CCSGG	2 cut(s)	779, 780
AvaI	CYCGRG	2 cut(s)	778, 1577
AvaII	GGWCC	1 cut(s)	911
AxyI	CCTNAGG	1 cut(s)	1247
BamHI	GGATCC	1 cut(s)	1035
BanI	GGYRCC	2 cut(s)	112, 1347
BanII	GRGCYC	1 cut(s)	404
BauI	CACGAG	1 cut(s)	1601
BbsI	GAAGAC	4 cut(s)	178, 204, 273, 450
Bbv12I	GWGCWC	2 cut(s)	404, 852
BbvI	GCAGC	1 cut(s)	1329
BccI	CCATC	4 cut(s)	279, 441, 1054, 1178
BceAI	ACGGC	1 cut(s)	1058
BciT130I	CCWGG	2 cut(s)	1101, 1332
BclI	TGATCA	2 cut(s)	51, 340
BcnI	CCSGG	2 cut(s)	779, 780
BcoDI	GTCTC	1 cut(s)	356
BfaI	CTAG	3 cut(s)	386, 462, 1445
BfmI	CTRYAG	1 cut(s)	261
BfoI	RGCGCY	1 cut(s)	116
BglI	GCCNNNNNGGC	1 cut(s)	780
BglII	AGATCT	1 cut(s)	695
BisI	GCNGC	3 cut(s)	1083, 1343, 1346
BlsI	GCNGC	3 cut(s)	1084, 1344, 1347
Bme1390I	CCNGG	4 cut(s)	779, 780, 1101, 1332
Bme18I	GGWCC	1 cut(s)	911
BmeT110I	CYCGRG	2 cut(s)	778, 1577
BmgT120I	GGNCC	2 cut(s)	772, 911
BmiI	GGNNCC	3 cut(s)	114, 1037, 1349
BmrFI	CCNGG	4 cut(s)	779, 780, 1101, 1332
BmsI	GCATC	1 cut(s)	1234
BoxI	GACNNNNGTC	1 cut(s)	26
BpiI	GAAGAC	4 cut(s)	178, 204, 273, 450
BplI	GAGNNNNNCTC	2 cut(s)	357, 389
Bpu10I	CCTNAGC	1 cut(s)	403
BpuEI	CTTGAG	2 cut(s)	418, 1038
BpuMI	CCSGG	2 cut(s)	779, 780
BsaBI	GATNNNNATC	1 cut(s)	517
BsaHI	GRCGYC	1 cut(s)	113
BsaI	GGTCTC	1 cut(s)	356
BsaJI	CCNNGG	5 cut(s)	778, 1040, 1100, 1373, 1586
BsaWI	WCCGGW	1 cut(s)	827
BsaXI	ACNNNNNCTCC	2 cut(s)	15, 45
Bsc4I	CCNNNNNNNGG	4 cut(s)	109, 574, 785, 1252
Bse1I	ACTGG	2 cut(s)	246, 477
Bse21I	CCTNAGG	1 cut(s)	1247
Bse3DI	GCAATG	1 cut(s)	590
Bse8I	GATNNNNATC	1 cut(s)	517
BseBI	CCWGG	2 cut(s)	1101, 1332
BseDI	CCNNGG	5 cut(s)	778, 1040, 1100, 1373, 1586
BseGI	GGATG	3 cut(s)	599, 1096, 1177
BseJI	GATNNNNATC	1 cut(s)	517
BseLI	CCNNNNNNNGG	4 cut(s)	109, 574, 785, 1252
BseMI	GCAATG	1 cut(s)	590
BseMII	CTCAG	1 cut(s)	417
BseNI	ACTGG	2 cut(s)	246, 477
BseRI	GAGGAG	1 cut(s)	1295
BseXI	GCAGC	1 cut(s)	1329
BseYI	CCCAGC	1 cut(s)	545
BsgI	GTGCAG	2 cut(s)	777, 906
Bsh1236I	CGCG	3 cut(s)	27, 1137, 1375
BshFI	GGCC	2 cut(s)	774, 1493
BshNI	GGYRCC	2 cut(s)	112, 1347
BsiHKAI	GWGCWC	2 cut(s)	404, 852
BsiHKCI	CYCGRG	2 cut(s)	778, 1577
BsiSI	CCGG	5 cut(s)	174, 779, 828, 1465, 1490
BslFI	GGGAC	1 cut(s)	1391
BslI	CCNNNNNNNGG	4 cut(s)	109, 574, 785, 1252
BsmAI	GTCTC	1 cut(s)	356
BsmFI	GGGAC	1 cut(s)	1391
BsnI	GGCC	2 cut(s)	774, 1493
Bso31I	GGTCTC	1 cut(s)	356
BsoBI	CYCGRG	2 cut(s)	778, 1577
Bsp1286I	GDGCHC	2 cut(s)	404, 852
Bsp1407I	TGTACA	1 cut(s)	1322
BspACI	CCGC	7 cut(s)	1082, 1137, 1345, 1351, 1373, 1375, 1509
BspANI	GGCC	2 cut(s)	774, 1493
BspCNI	CTCAG	1 cut(s)	416
BspFNI	CGCG	3 cut(s)	27, 1137, 1375
BspLI	GGNNCC	3 cut(s)	114, 1037, 1349
BspPI	GGATC	7 cut(s)	149, 507, 585, 1030, 1043, 1164, 1510
BspT107I	GGYRCC	2 cut(s)	112, 1347
BspTNI	GGTCTC	1 cut(s)	356
BsrDI	GCAATG	1 cut(s)	590
BsrGI	TGTACA	1 cut(s)	1322
BsrI	ACTGG	2 cut(s)	246, 477
BssECI	CCNNGG	5 cut(s)	778, 1040, 1100, 1373, 1586
BssNI	GRCGYC	1 cut(s)	113
BssSI	CACGAG	1 cut(s)	1601
BssT1I	CCWWGG	1 cut(s)	1586
Bst2BI	CACGAG	1 cut(s)	1601
Bst2UI	CCWGG	2 cut(s)	1101, 1332
Bst4CI	ACNGT	4 cut(s)	67, 150, 215, 724
Bst6I	CTCTTC	2 cut(s)	358, 404
BstACI	GRCGYC	1 cut(s)	113
BstAUI	TGTACA	1 cut(s)	1322
BstC8I	GCNNGC	2 cut(s)	1531, 1537
BstDEI	CTNAG	4 cut(s)	18, 190, 403, 1247
BstDSI	CCRYGG	2 cut(s)	1040, 1373
BstENI	CCTNNNNNAGG	1 cut(s)	1250
BstF5I	GGATG	3 cut(s)	599, 1096, 1177
BstFNI	CGCG	3 cut(s)	27, 1137, 1375
BstH2I	RGCGCY	1 cut(s)	116
BstHHI	GCGC	2 cut(s)	115, 1535
BstMAI	GTCTC	1 cut(s)	356
BstMWI	GCNNNNNNNGC	2 cut(s)	88, 780
BstNI	CCWGG	2 cut(s)	1101, 1332
BstPAI	GACNNNNGTC	1 cut(s)	26
BstSCI	CCNGG	4 cut(s)	777, 778, 1099, 1330
BstSFI	CTRYAG	1 cut(s)	261
BstUI	CGCG	3 cut(s)	27, 1137, 1375
BstV1I	GCAGC	1 cut(s)	1329
BstV2I	GAAGAC	4 cut(s)	178, 204, 273, 450
BstX2I	RGATCY	5 cut(s)	512, 695, 1035, 1156, 1502
BstXI	CCANNNNNNTGG	1 cut(s)	650
BstYI	RGATCY	5 cut(s)	512, 695, 1035, 1156, 1502
Bsu36I	CCTNAGG	1 cut(s)	1247
BsuRI	GGCC	2 cut(s)	774, 1493
BtgI	CCRYGG	2 cut(s)	1040, 1373
BtgZI	GCGATG	1 cut(s)	699
BtsCI	GGATG	3 cut(s)	599, 1096, 1177
BtsI	GCAGTG	1 cut(s)	343
BtsIMutI	CAGTG	3 cut(s)	343, 386, 484
Cac8I	GCNNGC	2 cut(s)	1531, 1537
CaiI	CAGNNNCTG	1 cut(s)	920
CfoI	GCGC	2 cut(s)	115, 1535
Cfr13I	GGNCC	2 cut(s)	772, 911
Cfr42I	CCGCGG	1 cut(s)	1376
Cfr9I	CCCGGG	1 cut(s)	778
CseI	GACGC	2 cut(s)	16, 1143
Csp6I	GTAC	5 cut(s)	371, 416, 430, 1287, 1323
CviAII	CATG	2 cut(s)	1046, 1499
CviQI	GTAC	5 cut(s)	371, 416, 430, 1287, 1323
DdeI	CTNAG	4 cut(s)	18, 190, 403, 1247
DinI	GGCGCC	1 cut(s)	114
DraI	TTTAAA	2 cut(s)	358, 627
EaeI	YGGCCR	1 cut(s)	1491
Eam1104I	CTCTTC	2 cut(s)	358, 404
EarI	CTCTTC	2 cut(s)	358, 404
EciI	GGCGGA	1 cut(s)	1524
Ecl136II	GAGCTC	1 cut(s)	402
Eco130I	CCWWGG	1 cut(s)	1586
Eco24I	GRGCYC	1 cut(s)	404
Eco31I	GGTCTC	1 cut(s)	356
Eco32I	GATATC	1 cut(s)	1024
Eco47I	GGWCC	1 cut(s)	911
Eco53kI	GAGCTC	1 cut(s)	402
Eco57I	CTGAAG	1 cut(s)	1232
Eco81I	CCTNAGG	1 cut(s)	1247
Eco88I	CYCGRG	2 cut(s)	778, 1577
EcoICRI	GAGCTC	1 cut(s)	402
EcoNI	CCTNNNNNAGG	1 cut(s)	1250
EcoO109I	RGGNCCY	1 cut(s)	772
EcoRII	CCWGG	2 cut(s)	1099, 1330
EcoRV	GATATC	1 cut(s)	1024
EcoT14I	CCWWGG	1 cut(s)	1586
EcoT22I	ATGCAT	1 cut(s)	1390
EcoT38I	GRGCYC	1 cut(s)	404
EgeI	GGCGCC	1 cut(s)	114
EheI	GGCGCC	1 cut(s)	114
ErhI	CCWWGG	1 cut(s)	1586
FaeI	CATG	2 cut(s)	1049, 1502
FalI	AAGNNNNNCTT	2 cut(s)	1550, 1582
FaqI	GGGAC	1 cut(s)	1391
FatI	CATG	2 cut(s)	1045, 1498
FauI	CCCGC	3 cut(s)	1130, 1368, 1380
FbaI	TGATCA	2 cut(s)	51, 340
FblI	GTMKAC	2 cut(s)	1302, 1368
Fnu4HI	GCNGC	3 cut(s)	1083, 1343, 1346
FokI	GGATG	3 cut(s)	586, 1103, 1164
FriOI	GRGCYC	1 cut(s)	404
Fsp4HI	GCNGC	3 cut(s)	1083, 1343, 1346
FspBI	CTAG	3 cut(s)	386, 462, 1445
GlaI	GCGC	2 cut(s)	114, 1534
GluI	GCNGC	3 cut(s)	1083, 1343, 1346
GsaI	CCCAGC	1 cut(s)	549
HaeII	RGCGCY	1 cut(s)	116
HaeIII	GGCC	2 cut(s)	774, 1493
HapII	CCGG	5 cut(s)	174, 779, 828, 1465, 1490
HgaI	GACGC	2 cut(s)	16, 1143
HhaI	GCGC	2 cut(s)	115, 1535
Hin1I	GRCGYC	1 cut(s)	113
Hin1II	CATG	2 cut(s)	1049, 1502
Hin6I	GCGC	2 cut(s)	113, 1533
HinP1I	GCGC	2 cut(s)	113, 1533
HincII	GTYRAC	2 cut(s)	984, 1303
HindII	GTYRAC	2 cut(s)	984, 1303
HindIII	AAGCTT	2 cut(s)	656, 1537
HinfI	GANTC	7 cut(s)	165, 446, 748, 977, 1292, 1451, 1461
HpaII	CCGG	5 cut(s)	174, 779, 828, 1465, 1490
Hpy166II	GTNNAC	3 cut(s)	984, 1303, 1369
Hpy188I	TCNGA	5 cut(s)	56, 154, 210, 438, 451
Hpy188III	TCNNGA	7 cut(s)	42, 524, 745, 812, 1055, 1160, 1181
Hpy8I	GTNNAC	3 cut(s)	984, 1303, 1369
Hpy99I	CGWCG	1 cut(s)	219
HpyCH4III	ACNGT	4 cut(s)	67, 150, 215, 724
HpyCH4V	TGCA	7 cut(s)	91, 325, 595, 758, 799, 923, 1388
HpyF10VI	GCNNNNNNNGC	2 cut(s)	88, 780
HpyF3I	CTNAG	4 cut(s)	18, 190, 403, 1247
Hsp92I	GRCGYC	1 cut(s)	113
Hsp92II	CATG	2 cut(s)	1049, 1502
HspAI	GCGC	2 cut(s)	113, 1533
KasI	GGCGCC	1 cut(s)	112
Ksp22I	TGATCA	2 cut(s)	51, 340
KspI	CCGCGG	1 cut(s)	1376
LmnI	GCTCC	2 cut(s)	254, 847
Lsp1109I	GCAGC	1 cut(s)	1329
LweI	GCATC	1 cut(s)	1234
MaeI	CTAG	3 cut(s)	386, 462, 1445
MaeIII	GTNAC	5 cut(s)	286, 583, 820, 1267, 1440
MflI	RGATCY	5 cut(s)	512, 695, 1035, 1156, 1502
MhlI	GDGCHC	2 cut(s)	404, 852
MluCI	AATT	4 cut(s)	440, 929, 1170, 1544
MluI	ACGCGT	1 cut(s)	25
Mly113I	GGCGCC	1 cut(s)	113
MlyI	GAGTC	1 cut(s)	455
MmeI	TCCRAC	1 cut(s)	825
Mph1103I	ATGCAT	1 cut(s)	1390
MroXI	GAANNNNTTC	1 cut(s)	1068
MseI	TTAA	4 cut(s)	357, 626, 768, 1007
MslI	CAYNNNNRTG	1 cut(s)	1182
MspA1I	CMGCKG	1 cut(s)	1375
MspI	CCGG	5 cut(s)	174, 779, 828, 1465, 1490
MspR9I	CCNGG	4 cut(s)	779, 780, 1101, 1332
MvaI	CCWGG	2 cut(s)	1101, 1332
MvnI	CGCG	3 cut(s)	27, 1137, 1375
MwoI	GCNNNNNNNGC	2 cut(s)	88, 780
NarI	GGCGCC	1 cut(s)	113
NciI	CCSGG	2 cut(s)	779, 780
NlaIII	CATG	2 cut(s)	1049, 1502
NlaIV	GGNNCC	3 cut(s)	114, 1037, 1349
NmuCI	GTSAC	3 cut(s)	286, 583, 820
NsiI	ATGCAT	1 cut(s)	1390
PdmI	GAANNNNTTC	1 cut(s)	1068
PfeI	GAWTC	6 cut(s)	165, 748, 977, 1292, 1451, 1461
PflMI	CCANNNNNTGG	1 cut(s)	109
PfoI	TCCNGGA	1 cut(s)	1330
PkrI	GCNGC	3 cut(s)	1084, 1344, 1347
PleI	GAGTC	1 cut(s)	454
PluTI	GGCGCC	1 cut(s)	116
PpsI	GAGTC	1 cut(s)	454
PshAI	GACNNNNGTC	1 cut(s)	26
Psp124BI	GAGCTC	1 cut(s)	404
Psp6I	CCWGG	2 cut(s)	1099, 1330
PspFI	CCCAGC	1 cut(s)	545
PspGI	CCWGG	2 cut(s)	1099, 1330
PspN4I	GGNNCC	3 cut(s)	114, 1037, 1349
PspPI	GGNCC	2 cut(s)	772, 911
PsrI	GAACNNNNNNTAC	2 cut(s)	1056, 1088
PstNI	CAGNNNCTG	1 cut(s)	920
PsuI	RGATCY	5 cut(s)	512, 695, 1035, 1156, 1502
RsaI	GTAC	5 cut(s)	372, 417, 431, 1288, 1324
RsaNI	GTAC	5 cut(s)	371, 416, 430, 1287, 1323
RseI	CAYNNNNRTG	1 cut(s)	1182
SacI	GAGCTC	1 cut(s)	404
SacII	CCGCGG	1 cut(s)	1376
SalI	GTCGAC	1 cut(s)	1301
SaqAI	TTAA	4 cut(s)	357, 626, 768, 1007
SatI	GCNGC	3 cut(s)	1083, 1343, 1346
Sau96I	GGNCC	2 cut(s)	772, 911
SchI	GAGTC	1 cut(s)	455
ScrFI	CCNGG	4 cut(s)	779, 780, 1101, 1332
SduI	GDGCHC	2 cut(s)	404, 852
SfaNI	GCATC	1 cut(s)	1234
SfcI	CTRYAG	1 cut(s)	261
SfoI	GGCGCC	1 cut(s)	114
Sfr303I	CCGCGG	1 cut(s)	1376
SgrBI	CCGCGG	1 cut(s)	1376
SinI	GGWCC	1 cut(s)	911
SmaI	CCCGGG	1 cut(s)	780
SmiMI	CAYNNNNRTG	1 cut(s)	1182
SmlI	CTYRAG	2 cut(s)	397, 1053
SmoI	CTYRAG	2 cut(s)	397, 1053
Sse9I	AATT	4 cut(s)	440, 929, 1170, 1544
SsiI	CCGC	7 cut(s)	1082, 1137, 1345, 1351, 1373, 1375, 1509
SspDI	GGCGCC	1 cut(s)	112
SspMI	CTAG	3 cut(s)	386, 462, 1445
SstI	GAGCTC	1 cut(s)	404
StyD4I	CCNGG	4 cut(s)	777, 778, 1099, 1330
StyI	CCWWGG	1 cut(s)	1586
TaaI	ACNGT	4 cut(s)	67, 150, 215, 724
TaqI	TCGA	3 cut(s)	195, 891, 1302
TaqII	GACCGA	1 cut(s)	705
TasI	AATT	4 cut(s)	440, 929, 1170, 1544
TatI	WGTACW	2 cut(s)	370, 1322
TauI	GCSGC	2 cut(s)	1085, 1348
TfiI	GAWTC	6 cut(s)	165, 748, 977, 1292, 1451, 1461
Tru1I	TTAA	4 cut(s)	357, 626, 768, 1007
Tru9I	TTAA	4 cut(s)	357, 626, 768, 1007
TscAI	CASTG	3 cut(s)	343, 386, 484
TseFI	GTSAC	3 cut(s)	286, 583, 820
TseI	GCWGC	1 cut(s)	1342
Tsp45I	GTSAC	3 cut(s)	286, 583, 820
TspDTI	ATGAA	6 cut(s)	150, 320, 498, 879, 987, 1253
TspGWI	ACGGA	2 cut(s)	177, 216
TspMI	CCCGGG	1 cut(s)	778
TspRI	CASTG	3 cut(s)	343, 386, 484
Van91I	CCANNNNNTGG	1 cut(s)	109
VpaK11BI	GGWCC	1 cut(s)	911
XagI	CCTNNNNNAGG	1 cut(s)	1250
XapI	RAATTY	1 cut(s)	1544
XmaI	CCCGGG	1 cut(s)	778
XmiI	GTMKAC	2 cut(s)	1302, 1368
XmnI	GAANNNNTTC	1 cut(s)	1068
XspI	CTAG	3 cut(s)	386, 462, 1445
Zsp2I	ATGCAT	1 cut(s)	1390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.