Prupe.1G269400_v2.0.a1

SNF1-related protein kinase regulatory subunit gamma-1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
27668615 .. 27670882
2268 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G269400.1

Sequence Viewer

Length: 1326 bp
ATGGCACATCCACAACCCCAAGAACAAGAGGTCGAGAGTCCTAAAATCTCGGCCTACGACGCCTACTTCGAAACAGTCCAGTCCAGGAAGAAATTACCAGGTCCCCTACAAGAGAATTTGACATTTGCATTTTCAAAAGTTCCAGTTTCAGCTTTCCAAGGAGTTCCTGGAGGCAAAGTGATTGAGATTGGAGCAGATACATGTATTGCTGATGCAGTGAAGGTTCTGTCTCGACACCACATTTTGTCAGCTCCTGTGAGGAACCCAGAAGCAGAGGCAAATTCAGATTGGAGTGACAAGTACCTTGGGATCGTAGATTACTCAGCCATTCTTCTTTGGGTGCTGGAGACTTGTAGACTTTCTCCATCATTTTGTTCAGCAACTGCTGCTGGAGTTGGTGGTGCAGGAGCTATGGGCGCCATTGGAGCTGTTGCATTGGGTGTCACTGGTCCTGCTGCAGTTGCAGGCCTAACTGCTGCTGCAGTTTGTTCTGCTGTGGCTGGTGCGGCTGTAGAGAAAGGGGAGGCCAAAGATTCTCCCACAGGTGCCAATAATTTGAGCGAAGATTTCGACAGCATTATACTACAAGATGAACACTTCAAGTCAACCACAGTGAGGTCAATACTTAAATCGTTCCGATGGGCGCCATTCCTTCCAGTTGGGACAGACAGTTCTATGTTGAGTGTCTTGCTGCTACTCTCAAAATATAGGATGAGAAATGTACCTGTAATAGAACCAGGCCAACCCAACATCAAGAACTTCATTACTCAATCAGCAGTTGTTCATGGTCTTGAGGGGTGCAAAGGAATGGAATGGTTTGACTGCATTGCTGCAAAGCCCATCTCTGATTTGGGGCTTCCTTTTATGGTCTCTAATGAGGTTATTAGTGCAAATATCAATGATCCAATACTAGAAGCTTTCATGAAAATGAGAGAGAACGAAGTTGGTGGTCTTCCAGTTGTGGAGGGGACAAAGAAGAAGATAGTTGGTAATGTCAGCATAAGCGATATCAGATACTCTTTGCTCAAACCAGAGCTCTTCTCCAATTTCAGAAATCTGAGTGTTAAGGACTTCATGAGCGCCATATCAAAAAACCAGGGGAAAGCAATGTCACCAATTACATGCAATCACCAGTCAAGTCTTGGTTATGTGATTGAAACCCTAGCTTCCAAATCGGTGCATAGGATCTATGTGGTGGATGGGGAGGAATGCCAAGTTGTTGGTGTCATTACACTCAGAGATGTGATTTCTTGCTTCATTTCTGAGCCCCACAACCACTTTGATGCTTACCTGGGCTTTGCCGTGAAGCAGATAATGAAGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

442

Amino Acids

47.35

Weight (kDa)

5.96

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 416, 545, 643
AccI GTMKAC 1 cut(s) 355
AciI CCGC 1 cut(s) 506
AclWI GGATC 3 cut(s) 317, 896, 1193
AcsI RAATTY 2 cut(s) 115, 280
AcyI GRCGYC 3 cut(s) 60, 417, 644
AfaI GTAC 2 cut(s) 302, 723
AfiI CCNNNNNNNGG 1 cut(s) 615
AflIII ACRYGT 1 cut(s) 200
AgsI TTSAA 3 cut(s) 135, 601, 1157
AjnI CCWGG 6 cut(s) 83, 97, 166, 736, 1095, 1290
AloI GAACNNNNNNTCC 2 cut(s) 655, 687
AluBI AGCT 7 cut(s) 152, 251, 410, 428, 917, 1036, 1166
AluI AGCT 7 cut(s) 152, 251, 410, 428, 917, 1036, 1166
Alw21I GWGCWC 1 cut(s) 1038
Alw26I GTCTC 3 cut(s) 234, 341, 874
AlwI GGATC 3 cut(s) 317, 896, 1193
AlwNI CAGNNNCTG 2 cut(s) 254, 383
AoxI GGCC 4 cut(s) 51, 466, 525, 739
ApeKI GCWGC 6 cut(s) 386, 455, 476, 479, 691, 830
ApoI RAATTY 2 cut(s) 115, 280
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
AspLEI GCGC 3 cut(s) 419, 646, 1082
AspS9I GGNCC 2 cut(s) 101, 449
AsuHPI GGTGA 2 cut(s) 1104, 1121
AsuII TTCGAA 1 cut(s) 69
AvaII GGWCC 2 cut(s) 101, 449
BanI GGYRCC 3 cut(s) 416, 545, 643
BanII GRGCYC 2 cut(s) 1038, 1269
BbsI GAAGAC 1 cut(s) 944
Bbv12I GWGCWC 1 cut(s) 1038
BbvI GCAGC 6 cut(s) 373, 442, 463, 466, 678, 817
BccI CCATC 4 cut(s) 373, 633, 848, 1193
BceAI ACGGC 1 cut(s) 1286
BciT130I CCWGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
BcoDI GTCTC 3 cut(s) 234, 341, 874
BfaI CTAG 2 cut(s) 911, 1163
BfmI CTRYAG 3 cut(s) 456, 480, 510
BfoI RGCGCY 3 cut(s) 420, 647, 1083
BisI GCNGC 7 cut(s) 387, 456, 477, 480, 507, 692, 831
BlsI GCNGC 7 cut(s) 388, 457, 478, 481, 508, 693, 832
Bme1390I CCNGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
Bme18I GGWCC 2 cut(s) 101, 449
BmgT120I GGNCC 2 cut(s) 101, 449
BmiI GGNNCC 5 cut(s) 103, 263, 418, 547, 645
BmrFI CCNGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
BmsI GCATC 2 cut(s) 202, 1273
BpiI GAAGAC 1 cut(s) 944
BplI GAGNNNNNCTC 2 cut(s) 1025, 1057
BpmI CTGGAG 3 cut(s) 189, 365, 411
Bpu14I TTCGAA 1 cut(s) 69
BpuEI CTTGAG 1 cut(s) 812
BsaHI GRCGYC 3 cut(s) 60, 417, 644
BsaI GGTCTC 1 cut(s) 874
BsaJI CCNNGG 4 cut(s) 157, 304, 1096, 1291
BsaXI ACNNNNNCTCC 2 cut(s) 162, 192
Bsc4I CCNNNNNNNGG 1 cut(s) 615
Bse1I ACTGG 6 cut(s) 79, 143, 451, 656, 956, 1132
Bse3DI GCAATG 2 cut(s) 825, 1113
BseBI CCWGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
BseDI CCNNGG 4 cut(s) 157, 304, 1096, 1291
BseGI GGATG 3 cut(s) 7, 717, 1204
BseLI CCNNNNNNNGG 1 cut(s) 615
BseMI GCAATG 2 cut(s) 825, 1113
BseMII CTCAG 4 cut(s) 336, 1049, 1249, 1254
BseNI ACTGG 6 cut(s) 79, 143, 451, 656, 956, 1132
BseXI GCAGC 6 cut(s) 373, 442, 463, 466, 678, 817
BsgI GTGCAG 1 cut(s) 423
BshFI GGCC 4 cut(s) 53, 468, 527, 741
BshNI GGYRCC 3 cut(s) 416, 545, 643
BsiHKAI GWGCWC 1 cut(s) 1038
BslFI GGGAC 3 cut(s) 87, 676, 982
BslI CCNNNNNNNGG 1 cut(s) 615
BsmAI GTCTC 3 cut(s) 234, 341, 874
BsmFI GGGAC 3 cut(s) 87, 676, 982
BsmI GAATGC 1 cut(s) 1214
BsnI GGCC 4 cut(s) 53, 468, 527, 741
Bso31I GGTCTC 1 cut(s) 874
Bsp119I TTCGAA 1 cut(s) 69
Bsp1286I GDGCHC 2 cut(s) 1038, 1269
Bsp143I GATC 3 cut(s) 309, 901, 1185
BspACI CCGC 1 cut(s) 506
BspANI GGCC 4 cut(s) 53, 468, 527, 741
BspCNI CTCAG 4 cut(s) 335, 1050, 1248, 1255
BspHI TCATGA 2 cut(s) 921, 1074
BspLI GGNNCC 5 cut(s) 103, 263, 418, 547, 645
BspMAI CTGCAG 2 cut(s) 460, 484
BspPI GGATC 3 cut(s) 317, 896, 1193
BspQI GCTCTTC 1 cut(s) 1043
BspT104I TTCGAA 1 cut(s) 69
BspT107I GGYRCC 3 cut(s) 416, 545, 643
BspTNI GGTCTC 1 cut(s) 874
BsrDI GCAATG 2 cut(s) 825, 1113
BsrI ACTGG 6 cut(s) 79, 143, 451, 656, 956, 1132
BssECI CCNNGG 4 cut(s) 157, 304, 1096, 1291
BssMI GATC 3 cut(s) 309, 901, 1185
BssNI GRCGYC 3 cut(s) 60, 417, 644
BssT1I CCWWGG 2 cut(s) 157, 304
Bst2UI CCWGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
Bst4CI ACNGT 3 cut(s) 76, 613, 671
Bst6I CTCTTC 1 cut(s) 1043
BstACI GRCGYC 3 cut(s) 60, 417, 644
BstAPI GCANNNNNTGC 1 cut(s) 386
BstBI TTCGAA 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 466
BstDEI CTNAG 4 cut(s) 322, 1058, 1235, 1263
BstF5I GGATG 3 cut(s) 7, 717, 1204
BstH2I RGCGCY 3 cut(s) 420, 647, 1083
BstHHI GCGC 3 cut(s) 419, 646, 1082
BstKTI GATC 3 cut(s) 312, 904, 1188
BstMAI GTCTC 3 cut(s) 234, 341, 874
BstMBI GATC 3 cut(s) 309, 901, 1185
BstMWI GCNNNNNNNGC 6 cut(s) 59, 386, 416, 425, 461, 506
BstNI CCWGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
BstNSI RCATGY 2 cut(s) 204, 1125
BstSCI CCNGG 6 cut(s) 83, 97, 166, 736, 1095, 1290
BstSFI CTRYAG 3 cut(s) 456, 480, 510
BstV1I GCAGC 6 cut(s) 373, 442, 463, 466, 678, 817
BstV2I GAAGAC 1 cut(s) 944
BstX2I RGATCY 1 cut(s) 1185
BstXI CCANNNNNNTGG 1 cut(s) 1220
BstYI RGATCY 1 cut(s) 1185
BsuRI GGCC 4 cut(s) 53, 468, 527, 741
BtsCI GGATG 3 cut(s) 7, 717, 1204
BtsI GCAGTG 1 cut(s) 222
BtsIMutI CAGTG 3 cut(s) 222, 444, 618
Cac8I GCNNGC 1 cut(s) 466
CaiI CAGNNNCTG 2 cut(s) 254, 383
CciI TCATGA 2 cut(s) 921, 1074
CfoI GCGC 3 cut(s) 419, 646, 1082
Cfr13I GGNCC 2 cut(s) 101, 449
CseI GACGC 1 cut(s) 68
CsiI ACCWGGT 1 cut(s) 97
Csp6I GTAC 2 cut(s) 301, 722
CviAII CATG 5 cut(s) 201, 785, 922, 1075, 1122
CviQI GTAC 2 cut(s) 301, 722
DdeI CTNAG 4 cut(s) 322, 1058, 1235, 1263
DinI GGCGCC 2 cut(s) 418, 645
DpnI GATC 3 cut(s) 311, 903, 1187
DpnII GATC 3 cut(s) 309, 901, 1185
Eam1104I CTCTTC 1 cut(s) 1043
EarI CTCTTC 1 cut(s) 1043
Ecl136II GAGCTC 1 cut(s) 1036
Eco130I CCWWGG 2 cut(s) 157, 304
Eco147I AGGCCT 1 cut(s) 468
Eco24I GRGCYC 2 cut(s) 1038, 1269
Eco31I GGTCTC 1 cut(s) 874
Eco32I GATATC 1 cut(s) 1009
Eco47I GGWCC 2 cut(s) 101, 449
Eco53kI GAGCTC 1 cut(s) 1036
EcoICRI GAGCTC 1 cut(s) 1036
EcoO109I RGGNCCY 1 cut(s) 101
EcoRII CCWGG 6 cut(s) 83, 97, 166, 736, 1095, 1290
EcoRV GATATC 1 cut(s) 1009
EcoT14I CCWWGG 2 cut(s) 157, 304
EcoT38I GRGCYC 2 cut(s) 1038, 1269
EgeI GGCGCC 2 cut(s) 418, 645
EheI GGCGCC 2 cut(s) 418, 645
ErhI CCWWGG 2 cut(s) 157, 304
FaeI CATG 5 cut(s) 204, 788, 925, 1078, 1125
FaqI GGGAC 3 cut(s) 87, 676, 982
FatI CATG 5 cut(s) 200, 784, 921, 1074, 1121
FblI GTMKAC 1 cut(s) 355
Fnu4HI GCNGC 7 cut(s) 387, 456, 477, 480, 507, 692, 831
FokI GGATG 2 cut(s) 724, 1211
FriOI GRGCYC 2 cut(s) 1038, 1269
Fsp4HI GCNGC 7 cut(s) 387, 456, 477, 480, 507, 692, 831
FspBI CTAG 2 cut(s) 911, 1163
GlaI GCGC 3 cut(s) 418, 645, 1081
GluI GCNGC 7 cut(s) 387, 456, 477, 480, 507, 692, 831
GsuI CTGGAG 3 cut(s) 189, 365, 411
HaeII RGCGCY 3 cut(s) 420, 647, 1083
HaeIII GGCC 4 cut(s) 53, 468, 527, 741
HgaI GACGC 1 cut(s) 68
HhaI GCGC 3 cut(s) 419, 646, 1082
Hin1I GRCGYC 3 cut(s) 60, 417, 644
Hin1II CATG 5 cut(s) 204, 788, 925, 1078, 1125
Hin6I GCGC 3 cut(s) 417, 644, 1080
HinP1I GCGC 3 cut(s) 417, 644, 1080
HincII GTYRAC 1 cut(s) 606
HindII GTYRAC 1 cut(s) 606
HindIII AAGCTT 1 cut(s) 915
HinfI GANTC 2 cut(s) 37, 533
HphI GGTGA 2 cut(s) 1104, 1121
Hpy166II GTNNAC 2 cut(s) 356, 606
Hpy188I TCNGA 8 cut(s) 286, 638, 847, 1013, 1052, 1059, 1238, 1264
Hpy188III TCNNGA 6 cut(s) 34, 231, 754, 791, 922, 1075
Hpy8I GTNNAC 2 cut(s) 356, 606
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 2 cut(s) 214, 662
HpyCH4III ACNGT 3 cut(s) 76, 613, 671
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 386, 416, 425, 461, 506
HpyF3I CTNAG 4 cut(s) 322, 1058, 1235, 1263
Hsp92I GRCGYC 3 cut(s) 60, 417, 644
Hsp92II CATG 5 cut(s) 204, 788, 925, 1078, 1125
HspAI GCGC 3 cut(s) 417, 644, 1080
KasI GGCGCC 2 cut(s) 416, 643
Kzo9I GATC 3 cut(s) 309, 901, 1185
LguI GCTCTTC 1 cut(s) 1043
LmnI GCTCC 4 cut(s) 191, 256, 407, 425
Lsp1109I GCAGC 6 cut(s) 373, 442, 463, 466, 678, 817
LweI GCATC 2 cut(s) 202, 1273
MabI ACCWGGT 1 cut(s) 97
MaeI CTAG 2 cut(s) 911, 1163
MaeIII GTNAC 3 cut(s) 293, 442, 1110
MalI GATC 3 cut(s) 311, 903, 1187
MboI GATC 3 cut(s) 309, 901, 1185
MboII GAAGA 7 cut(s) 100, 323, 575, 944, 988, 991, 1030
MflI RGATCY 1 cut(s) 1185
MhlI GDGCHC 2 cut(s) 1038, 1269
MluCI AATT 6 cut(s) 92, 115, 280, 553, 1045, 1116
Mly113I GGCGCC 2 cut(s) 417, 644
MlyI GAGTC 1 cut(s) 46
MseI TTAA 3 cut(s) 627, 1065, 1324
MslI CAYNNNNRTG 2 cut(s) 926, 1281
MspR9I CCNGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
Mva1269I GAATGC 1 cut(s) 1214
MvaI CCWGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
MwoI GCNNNNNNNGC 6 cut(s) 59, 386, 416, 425, 461, 506
NarI GGCGCC 2 cut(s) 417, 644
NdeII GATC 3 cut(s) 309, 901, 1185
NlaIII CATG 5 cut(s) 204, 788, 925, 1078, 1125
NlaIV GGNNCC 5 cut(s) 103, 263, 418, 547, 645
NmeAIII GCCGAG 1 cut(s) 29
NmuCI GTSAC 3 cut(s) 293, 442, 1110
NspI RCATGY 2 cut(s) 204, 1125
NspV TTCGAA 1 cut(s) 69
PagI TCATGA 2 cut(s) 921, 1074
PceI AGGCCT 1 cut(s) 468
PciI ACATGT 1 cut(s) 200
PciSI GCTCTTC 1 cut(s) 1043
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PctI GAATGC 1 cut(s) 1214
PfeI GAWTC 1 cut(s) 533
PfoI TCCNGGA 2 cut(s) 83, 166
PkrI GCNGC 7 cut(s) 388, 457, 478, 481, 508, 693, 832
PleI GAGTC 1 cut(s) 45
PluTI GGCGCC 2 cut(s) 420, 647
PpsI GAGTC 1 cut(s) 45
PpuMI RGGWCCY 1 cut(s) 101
PscI ACATGT 1 cut(s) 200
Psp124BI GAGCTC 1 cut(s) 1038
Psp5II RGGWCCY 1 cut(s) 101
Psp6I CCWGG 6 cut(s) 83, 97, 166, 736, 1095, 1290
PspGI CCWGG 6 cut(s) 83, 97, 166, 736, 1095, 1290
PspN4I GGNNCC 5 cut(s) 103, 263, 418, 547, 645
PspPI GGNCC 2 cut(s) 101, 449
PspPPI RGGWCCY 1 cut(s) 101
PstI CTGCAG 2 cut(s) 460, 484
PstNI CAGNNNCTG 2 cut(s) 254, 383
PsuI RGATCY 1 cut(s) 1185
RsaI GTAC 2 cut(s) 302, 723
RsaNI GTAC 2 cut(s) 301, 722
RseI CAYNNNNRTG 2 cut(s) 926, 1281
SacI GAGCTC 1 cut(s) 1038
SapI GCTCTTC 1 cut(s) 1043
SaqAI TTAA 3 cut(s) 627, 1065, 1324
SatI GCNGC 7 cut(s) 387, 456, 477, 480, 507, 692, 831
Sau3AI GATC 3 cut(s) 309, 901, 1185
Sau96I GGNCC 2 cut(s) 101, 449
SchI GAGTC 1 cut(s) 46
ScrFI CCNGG 6 cut(s) 85, 99, 168, 738, 1097, 1292
SduI GDGCHC 2 cut(s) 1038, 1269
SexAI ACCWGGT 1 cut(s) 97
SfaNI GCATC 2 cut(s) 202, 1273
SfcI CTRYAG 3 cut(s) 456, 480, 510
SfoI GGCGCC 2 cut(s) 418, 645
SfuI TTCGAA 1 cut(s) 69
SinI GGWCC 2 cut(s) 101, 449
SmiMI CAYNNNNRTG 2 cut(s) 926, 1281
SmlI CTYRAG 1 cut(s) 791
SmoI CTYRAG 1 cut(s) 791
Sse9I AATT 6 cut(s) 92, 115, 280, 553, 1045, 1116
SseBI AGGCCT 1 cut(s) 468
SsiI CCGC 1 cut(s) 506
SspDI GGCGCC 2 cut(s) 416, 643
SspMI CTAG 2 cut(s) 911, 1163
SstI GAGCTC 1 cut(s) 1038
StuI AGGCCT 1 cut(s) 468
StyD4I CCNGG 6 cut(s) 83, 97, 166, 736, 1095, 1290
StyI CCWWGG 2 cut(s) 157, 304
TaaI ACNGT 3 cut(s) 76, 613, 671
TaqI TCGA 4 cut(s) 33, 69, 232, 570
TasI AATT 6 cut(s) 92, 115, 280, 553, 1045, 1116
TauI GCSGC 1 cut(s) 509
TfiI GAWTC 1 cut(s) 533
Tru1I TTAA 3 cut(s) 627, 1065, 1324
Tru9I TTAA 3 cut(s) 627, 1065, 1324
TscAI CASTG 3 cut(s) 222, 451, 618
TseFI GTSAC 3 cut(s) 293, 442, 1110
TseI GCWGC 6 cut(s) 386, 455, 476, 479, 691, 830
Tsp45I GTSAC 3 cut(s) 293, 442, 1110
TspDTI ATGAA 7 cut(s) 606, 751, 773, 910, 938, 1063, 1246
TspRI CASTG 3 cut(s) 222, 451, 618
VpaK11BI GGWCC 2 cut(s) 101, 449
XapI RAATTY 2 cut(s) 115, 280
XceI RCATGY 2 cut(s) 204, 1125
XcmI CCANNNNNNNNNTGG 3 cut(s) 164, 847, 1139
XmiI GTMKAC 1 cut(s) 355
XspI CTAG 2 cut(s) 911, 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.