Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005153

Physical Location & Seq

Genomic Coordinates Forward (+)

29633634 .. 29634840

Gene Structure 1207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G301400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 477 bp

ATGATGGCCGCGCTCGGCTCCGATCAGCTGAAGCAGCTGAAAGACATCTTCATGCGCTTCGATATGGACTCCGACGGCAGCCTCACCCAGCTCGAGCTCGCCGCCCTGCTCCGGTCCCTGGGCGTCAAGCCCACCGGTGACCAGCTCCACGTCCTCCTCGCCAACATGGACGCCAACGGAAACGGCACCGTCGAGTTCGACGAGCTCGTCACCGCCATCTTGCCCGACATGAACGCGGAGATCCTCATCAACCAGGAGCAGCTCACGGAGGTCTTCCGGTCGTTCGATCGCGACGGAAACGGCTACATCACCGCCGCCGAGCTCGCCGGATCCATGGCCAAAATGGGTCACCCGTTGACGTACAGAGAGCTCTCCGATATGATGCAAGAGGCCGACACGAACGGCGATGGCGTGATTAGCTTCAGCGAATTCGCGACGATCATGTCTCGGTCCGCCGCCGATTTTCTTGGGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7

Protein Analysis

159

Amino Acids

17.19

Weight (kDa)

4.18

Isoelectric Point (pI)

26.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005153)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25600
fragaria_vesca	FvH4_4g28451
malus_domestica	MD06G1209000.v1.1 MD13G1050700.v1.1 MD14G1219400.v1.1 MD16G1051200.v1.1
prunus_persica	Prupe.1G301400_v2.0.a1 Prupe.5G214100_v2.0.a1
pyrus_communis	pycom13g04480 pycom14g18180 pycom16g04500
rosa_chinensis	RchiOBHm_Chr4g0436421 RchiOBHm_Chr7g0184291
rosa_laevigata	RLG00000004989 RLG00000006520
rosa_multiflora	Rmu_co8043624.1_g000001 Rmu_co8189102.1_g000001 Rmu_sc0013812.1_g000006
rosa_roxburghii	Rroxscaffold_3G00269760 Rroxscaffold_5G00377580
rosa_rugosa	Rorug04G0293700
rosa_samantha	Rh4AG348200 Rh4BG356800 Rh4DG350600 Rh7AG081400 Rh7BG065900 Rh7CG066200 Rh7DG066000
rosa_wichuraiana	Rw4G030430 Rw7G005400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	206, 442
AccB1I	GGYRCC	1 cut(s)	185
AccII	CGCG	4 cut(s)	11, 236, 291, 434
AciI	CCGC	8 cut(s)	9, 102, 213, 236, 312, 315, 453, 456
AclWI	GGATC	3 cut(s)	235, 324, 337
AcoI	YGGCCR	2 cut(s)	6, 336
AcsI	RAATTY	1 cut(s)	428
AcuI	CTGAAG	2 cut(s)	50, 406
AcyI	GRCGYC	2 cut(s)	123, 171
AfaI	GTAC	1 cut(s)	362
AfiI	CCNNNNNNNGG	2 cut(s)	111, 118
AgeI	ACCGGT	1 cut(s)	134
AjiI	CACGTC	1 cut(s)	151
AjnI	CCWGG	2 cut(s)	117, 252
Alw21I	GWGCWC	4 cut(s)	99, 207, 324, 372
Alw26I	GTCTC	1 cut(s)	450
AlwI	GGATC	3 cut(s)	235, 324, 337
Ama87I	CYCGRG	1 cut(s)	92
AoxI	GGCC	3 cut(s)	6, 336, 390
ApeKI	GCWGC	3 cut(s)	34, 78, 259
ApoI	RAATTY	1 cut(s)	428
AsiGI	ACCGGT	1 cut(s)	134
AspLEI	GCGC	2 cut(s)	13, 57
AspS9I	GGNCC	2 cut(s)	114, 450
AsuHPI	GGTGA	5 cut(s)	76, 149, 202, 301, 341
AvaI	CYCGRG	1 cut(s)	92
AvaII	GGWCC	2 cut(s)	114, 450
BalI	TGGCCA	1 cut(s)	338
BamHI	GGATCC	1 cut(s)	329
BanI	GGYRCC	1 cut(s)	185
BanII	GRGCYC	4 cut(s)	99, 207, 324, 372
BbsI	GAAGAC	1 cut(s)	265
Bbv12I	GWGCWC	4 cut(s)	99, 207, 324, 372
BbvI	GCAGC	3 cut(s)	46, 90, 271
BccI	CCATC	2 cut(s)	224, 401
BceAI	ACGGC	4 cut(s)	91, 199, 316, 418
BciT130I	CCWGG	2 cut(s)	119, 254
BcoDI	GTCTC	1 cut(s)	450
BisI	GCNGC	7 cut(s)	9, 35, 79, 102, 260, 315, 456
BlsI	GCNGC	7 cut(s)	10, 36, 80, 103, 261, 316, 457
Bme1390I	CCNGG	2 cut(s)	119, 254
Bme18I	GGWCC	2 cut(s)	114, 450
BmeT110I	CYCGRG	1 cut(s)	92
BmgBI	CACGTC	1 cut(s)	151
BmgT120I	GGNCC	2 cut(s)	114, 450
BmiI	GGNNCC	4 cut(s)	19, 116, 187, 331
BmrFI	CCNGG	2 cut(s)	119, 254
BmsI	GCATC	1 cut(s)	372
BpiI	GAAGAC	1 cut(s)	265
BsaBI	GATNNNNATC	1 cut(s)	245
BsaHI	GRCGYC	2 cut(s)	123, 171
BsaJI	CCNNGG	3 cut(s)	117, 118, 333
BsaWI	WCCGGW	3 cut(s)	111, 134, 276
Bsc4I	CCNNNNNNNGG	2 cut(s)	111, 118
Bse118I	RCCGGY	1 cut(s)	134
Bse8I	GATNNNNATC	1 cut(s)	245
BseBI	CCWGG	2 cut(s)	119, 254
BseDI	CCNNGG	3 cut(s)	117, 118, 333
BseJI	GATNNNNATC	1 cut(s)	245
BseLI	CCNNNNNNNGG	2 cut(s)	111, 118
BseRI	GAGGAG	1 cut(s)	146
BseXI	GCAGC	3 cut(s)	46, 90, 271
BseYI	CCCAGC	1 cut(s)	87
Bsh1236I	CGCG	4 cut(s)	11, 236, 291, 434
Bsh1285I	CGRYCG	2 cut(s)	281, 289
BshFI	GGCC	3 cut(s)	8, 338, 392
BshNI	GGYRCC	1 cut(s)	185
BshTI	ACCGGT	1 cut(s)	134
BsiEI	CGRYCG	2 cut(s)	281, 289
BsiHKAI	GWGCWC	4 cut(s)	99, 207, 324, 372
BsiHKCI	CYCGRG	1 cut(s)	92
BsiSI	CCGG	4 cut(s)	112, 135, 277, 327
BslFI	GGGAC	1 cut(s)	100
BslI	CCNNNNNNNGG	2 cut(s)	111, 118
BsmAI	GTCTC	1 cut(s)	450
BsmFI	GGGAC	1 cut(s)	100
BsnI	GGCC	3 cut(s)	8, 338, 392
BsoBI	CYCGRG	1 cut(s)	92
Bsp1286I	GDGCHC	4 cut(s)	99, 207, 324, 372
Bsp143I	GATC	5 cut(s)	22, 240, 286, 329, 438
Bsp19I	CCATGG	1 cut(s)	333
Bsp68I	TCGCGA	2 cut(s)	291, 434
BspACI	CCGC	8 cut(s)	9, 102, 213, 236, 312, 315, 453, 456
BspANI	GGCC	3 cut(s)	8, 338, 392
BspFNI	CGCG	4 cut(s)	11, 236, 291, 434
BspLI	GGNNCC	4 cut(s)	19, 116, 187, 331
BspPI	GGATC	3 cut(s)	235, 324, 337
BspT107I	GGYRCC	1 cut(s)	185
BsrFI	RCCGGY	1 cut(s)	134
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	3 cut(s)	117, 118, 333
BssMI	GATC	5 cut(s)	22, 240, 286, 329, 438
BssNI	GRCGYC	2 cut(s)	123, 171
BssT1I	CCWWGG	1 cut(s)	333
Bst2UI	CCWGG	2 cut(s)	119, 254
Bst4CI	ACNGT	1 cut(s)	190
BstACI	GRCGYC	2 cut(s)	123, 171
BstC8I	GCNNGC	2 cut(s)	99, 324
BstDSI	CCRYGG	1 cut(s)	333
BstEII	GGTNACC	2 cut(s)	137, 347
BstFNI	CGCG	4 cut(s)	11, 236, 291, 434
BstHHI	GCGC	2 cut(s)	13, 57
BstKTI	GATC	5 cut(s)	25, 243, 289, 332, 441
BstMAI	GTCTC	1 cut(s)	450
BstMBI	GATC	5 cut(s)	22, 240, 286, 329, 438
BstMCI	CGRYCG	2 cut(s)	281, 289
BstMWI	GCNNNNNNNGC	3 cut(s)	34, 323, 417
BstNI	CCWGG	2 cut(s)	119, 254
BstPI	GGTNACC	2 cut(s)	137, 347
BstSCI	CCNGG	2 cut(s)	117, 252
BstUI	CGCG	4 cut(s)	11, 236, 291, 434
BstV1I	GCAGC	3 cut(s)	46, 90, 271
BstV2I	GAAGAC	1 cut(s)	265
BstX2I	RGATCY	2 cut(s)	240, 329
BstYI	RGATCY	2 cut(s)	240, 329
BsuRI	GGCC	3 cut(s)	8, 338, 392
BtgI	CCRYGG	1 cut(s)	333
BtgZI	GCGATG	1 cut(s)	420
BtrI	CACGTC	1 cut(s)	151
BtuMI	TCGCGA	2 cut(s)	291, 434
Cac8I	GCNNGC	2 cut(s)	99, 324
CfoI	GCGC	2 cut(s)	13, 57
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	2 cut(s)	114, 450
CpoI	CGGWCCG	1 cut(s)	450
CseI	GACGC	2 cut(s)	112, 179
Csp6I	GTAC	1 cut(s)	361
CspAI	ACCGGT	1 cut(s)	134
CspI	CGGWCCG	1 cut(s)	450
CviAII	CATG	5 cut(s)	52, 166, 229, 334, 442
CviQI	GTAC	1 cut(s)	361
DpnI	GATC	5 cut(s)	24, 242, 288, 331, 440
DpnII	GATC	5 cut(s)	22, 240, 286, 329, 438
DrdI	GACNNNNNNGTC	2 cut(s)	206, 442
DseDI	GACNNNNNNGTC	2 cut(s)	206, 442
EaeI	YGGCCR	2 cut(s)	6, 336
EciI	GGCGGA	1 cut(s)	442
Ecl136II	GAGCTC	4 cut(s)	97, 205, 322, 370
Eco130I	CCWWGG	1 cut(s)	333
Eco24I	GRGCYC	4 cut(s)	99, 207, 324, 372
Eco47I	GGWCC	2 cut(s)	114, 450
Eco53kI	GAGCTC	4 cut(s)	97, 205, 322, 370
Eco57I	CTGAAG	2 cut(s)	50, 406
Eco88I	CYCGRG	1 cut(s)	92
Eco91I	GGTNACC	2 cut(s)	137, 347
EcoICRI	GAGCTC	4 cut(s)	97, 205, 322, 370
EcoO65I	GGTNACC	2 cut(s)	137, 347
EcoRI	GAATTC	1 cut(s)	428
EcoRII	CCWGG	2 cut(s)	117, 252
EcoT14I	CCWWGG	1 cut(s)	333
EcoT38I	GRGCYC	4 cut(s)	99, 207, 324, 372
ErhI	CCWWGG	1 cut(s)	333
FaeI	CATG	5 cut(s)	55, 169, 232, 337, 445
FaiI	YATR	7 cut(s)	53, 65, 167, 230, 335, 380, 443
FaqI	GGGAC	1 cut(s)	100
FatI	CATG	5 cut(s)	51, 165, 228, 333, 441
Fnu4HI	GCNGC	7 cut(s)	9, 35, 79, 102, 260, 315, 456
FriOI	GRGCYC	4 cut(s)	99, 207, 324, 372
Fsp4HI	GCNGC	7 cut(s)	9, 35, 79, 102, 260, 315, 456
GlaI	GCGC	2 cut(s)	12, 56
GluI	GCNGC	7 cut(s)	9, 35, 79, 102, 260, 315, 456
GsaI	CCCAGC	1 cut(s)	91
HaeIII	GGCC	3 cut(s)	8, 338, 392
HapII	CCGG	4 cut(s)	112, 135, 277, 327
HgaI	GACGC	2 cut(s)	112, 179
HhaI	GCGC	2 cut(s)	13, 57
Hin1I	GRCGYC	2 cut(s)	123, 171
Hin1II	CATG	5 cut(s)	55, 169, 232, 337, 445
Hin6I	GCGC	2 cut(s)	11, 55
HinP1I	GCGC	2 cut(s)	11, 55
HincII	GTYRAC	1 cut(s)	357
HindII	GTYRAC	1 cut(s)	357
HinfI	GANTC	1 cut(s)	68
HpaII	CCGG	4 cut(s)	112, 135, 277, 327
HphI	GGTGA	5 cut(s)	76, 149, 202, 301, 341
Hpy166II	GTNNAC	1 cut(s)	357
Hpy188I	TCNGA	4 cut(s)	22, 73, 376, 476
Hpy188III	TCNNGA	2 cut(s)	290, 433
Hpy8I	GTNNAC	1 cut(s)	357
Hpy99I	CGWCG	5 cut(s)	77, 194, 203, 296, 439
HpyCH4III	ACNGT	1 cut(s)	190
HpyCH4IV	ACGT	2 cut(s)	150, 359
HpyCH4V	TGCA	1 cut(s)	385
HpyF10VI	GCNNNNNNNGC	3 cut(s)	34, 323, 417
HpySE526I	ACGT	2 cut(s)	150, 359
Hsp92I	GRCGYC	2 cut(s)	123, 171
Hsp92II	CATG	5 cut(s)	55, 169, 232, 337, 445
HspAI	GCGC	2 cut(s)	11, 55
Kzo9I	GATC	5 cut(s)	22, 240, 286, 329, 438
LmnI	GCTCC	4 cut(s)	23, 114, 150, 256
Lsp1109I	GCAGC	3 cut(s)	46, 90, 271
LweI	GCATC	1 cut(s)	372
MaeII	ACGT	2 cut(s)	150, 359
MaeIII	GTNAC	3 cut(s)	137, 208, 347
MalI	GATC	5 cut(s)	24, 242, 288, 331, 440
MboI	GATC	5 cut(s)	22, 240, 286, 329, 438
MboII	GAAGA	2 cut(s)	40, 265
MflI	RGATCY	2 cut(s)	240, 329
MhlI	GDGCHC	4 cut(s)	99, 207, 324, 372
MlsI	TGGCCA	1 cut(s)	338
MluCI	AATT	1 cut(s)	428
MluNI	TGGCCA	1 cut(s)	338
MlyI	GAGTC	1 cut(s)	62
MmeI	TCCRAC	1 cut(s)	96
MnlI	CCTC	6 cut(s)	92, 164, 167, 254, 262, 382
Mox20I	TGGCCA	1 cut(s)	338
MscI	TGGCCA	1 cut(s)	338
MslI	CAYNNNNRTG	1 cut(s)	50
Msp20I	TGGCCA	1 cut(s)	338
MspA1I	CMGCKG	2 cut(s)	28, 37
MspI	CCGG	4 cut(s)	112, 135, 277, 327
MspR9I	CCNGG	2 cut(s)	119, 254
MvaI	CCWGG	2 cut(s)	119, 254
MvnI	CGCG	4 cut(s)	11, 236, 291, 434
MwoI	GCNNNNNNNGC	3 cut(s)	34, 323, 417
NcoI	CCATGG	1 cut(s)	333
NdeII	GATC	5 cut(s)	22, 240, 286, 329, 438
NlaIII	CATG	5 cut(s)	55, 169, 232, 337, 445
NlaIV	GGNNCC	4 cut(s)	19, 116, 187, 331
NmeAIII	GCCGAG	1 cut(s)	343
NmuCI	GTSAC	3 cut(s)	137, 208, 347
NruI	TCGCGA	2 cut(s)	291, 434
PaeR7I	CTCGAG	1 cut(s)	92
PasI	CCCWGGG	1 cut(s)	118
PcsI	WCGNNNNNNNCGW	4 cut(s)	189, 198, 204, 408
PinAI	ACCGGT	1 cut(s)	134
PkrI	GCNGC	7 cut(s)	10, 36, 80, 103, 261, 316, 457
Ple19I	CGATCG	1 cut(s)	289
PleI	GAGTC	1 cut(s)	62
PpsI	GAGTC	1 cut(s)	62
Psp124BI	GAGCTC	4 cut(s)	99, 207, 324, 372
Psp6I	CCWGG	2 cut(s)	117, 252
PspEI	GGTNACC	2 cut(s)	137, 347
PspFI	CCCAGC	1 cut(s)	87
PspGI	CCWGG	2 cut(s)	117, 252
PspN4I	GGNNCC	4 cut(s)	19, 116, 187, 331
PspPI	GGNCC	2 cut(s)	114, 450
PspXI	VCTCGAGB	1 cut(s)	92
PsuI	RGATCY	2 cut(s)	240, 329
PvuI	CGATCG	1 cut(s)	289
PvuII	CAGCTG	2 cut(s)	28, 37
RruI	TCGCGA	2 cut(s)	291, 434
RsaI	GTAC	1 cut(s)	362
RsaNI	GTAC	1 cut(s)	361
RseI	CAYNNNNRTG	1 cut(s)	50
Rsr2I	CGGWCCG	1 cut(s)	450
RsrII	CGGWCCG	1 cut(s)	450
SacI	GAGCTC	4 cut(s)	99, 207, 324, 372
SatI	GCNGC	7 cut(s)	9, 35, 79, 102, 260, 315, 456
Sau3AI	GATC	5 cut(s)	22, 240, 286, 329, 438
Sau96I	GGNCC	2 cut(s)	114, 450
SchI	GAGTC	1 cut(s)	62
ScrFI	CCNGG	2 cut(s)	119, 254
SduI	GDGCHC	4 cut(s)	99, 207, 324, 372
SfaNI	GCATC	1 cut(s)	372
Sfr274I	CTCGAG	1 cut(s)	92
SgrAI	CRCCGGYG	1 cut(s)	134
SinI	GGWCC	2 cut(s)	114, 450
SlaI	CTCGAG	1 cut(s)	92
SmiMI	CAYNNNNRTG	1 cut(s)	50
SmlI	CTYRAG	1 cut(s)	92
SmoI	CTYRAG	1 cut(s)	92
Sse9I	AATT	1 cut(s)	428
SsiI	CCGC	8 cut(s)	9, 102, 213, 236, 312, 315, 453, 456
SstI	GAGCTC	4 cut(s)	99, 207, 324, 372
StyD4I	CCNGG	2 cut(s)	117, 252
StyI	CCWWGG	1 cut(s)	333
TaaI	ACNGT	1 cut(s)	190
TaiI	ACGT	2 cut(s)	153, 362
TaqI	TCGA	5 cut(s)	60, 93, 192, 198, 285
TaqII	GACCGA	1 cut(s)	438
TasI	AATT	1 cut(s)	428
TauI	GCSGC	4 cut(s)	11, 104, 317, 458
TseFI	GTSAC	3 cut(s)	137, 208, 347
TseI	GCWGC	3 cut(s)	34, 78, 259
Tsp45I	GTSAC	3 cut(s)	137, 208, 347
TspDTI	ATGAA	2 cut(s)	40, 245
TspGWI	ACGGA	3 cut(s)	192, 281, 309
VpaK11BI	GGWCC	2 cut(s)	114, 450
XapI	RAATTY	1 cut(s)	428
XcmI	CCANNNNNNNNNTGG	1 cut(s)	340
XhoI	CTCGAG	1 cut(s)	92

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.