Prupe.1G324700_v2.0.a1

isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
30967669 .. 30972171
4503 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G324700.1

Sequence Viewer

Length: 1791 bp
ATGTCTGGGGAGATAGAAGAACCCTTTAGTTTTAGCTTTCAGTCAGACTCTTTACACTCTGGTTCCATATCATTTGGGAGGTTCGAAGATGAAGCGTTATCTTGGGAAAAGAGATCATCTTTCTCACATAACAGATATGTTGAAGAGGTTGAAAAATGCTTGAAACCAGGTTCAGTTATTAAGAAGAAAGCTTACTTTGAAGCTCATTTCAAAAAGAAGGGTCTTCCCAAACCAAATTTACCCGAGTGTCATCATGGTACAGATTATCAAGTCTGTGAAAATGATGTCTTGGAGAGTGGTGCTTACAGGGAAGAATTTGAACATGGAAATGAAGGCAGCAGTTATGCTCAATTTGATGAGAGCCCGGATGGTTCAGAGTATCATGGAGACTGTAGTGTTGTGACCGAATGTGAAAAAGAAGATCCTGAAGTTTTATTGTCTAGTCCTCAGAAGGTATCTTCCTTAAAGGATGATGATATTTTGGTCGATGGTGCTGTTGAAGATGCAAATTCTGAGGAAACACATCAACCTGGAAAGGATTGTGACGAATTTTCTTCAACTATTGATGAACCAGAGACTGATGTAAATAAGAATCATAATGGTGATGCAGCGAATGCTTATGAATCTTCTAACCCTGTTAATATATGCCCCAAGACTGAAGCAGCTAAGAAAATTGATAGCACTATTGTAGAAACTTGGCAAAGTGCTTCTCCAAAGTTGAAGGATGCAAAAGAATCCAAAACTTCCAAGCCCAGAGTCAATTCTAAGGCCAGCATTTCTCAGGTCCAGAGAAGCATTTCTTCTGAGGCATCTAAAGATCCTACAAAGAATTCTAATACAAGAGAAAGAGAGGGCACACGGAGGAGAACGGAAAAAGAAAAGCTGTCATCAAAAACTGCCATTCCATCAACACATTCTGGACGCAGAACTTCAAAATTAGAGGAATCTAGAGATCTGAAGGGAAAATCTGTTCATGAGAGTACAAGTGATAAAGAGTCACGAGGCAAGAAACTTGATGAACCTCAACCTCCGGCATTCAAGCCTGACCCGAGAAGATACCAAACAACAAACAGGCTTAACCACAGAGTCAATTTGACCAAGTCTGATACGAGATCAAGTGTTGCAACTTTCAATTTCAAAAGTTCTGAACGAGCAGAAAGGAGGAAAGAGGCAAGCCAGCATTTTTCCATGAAGTTGGAAGAAAAAATGCACGCTAAGGAAGATGAGATCAGTAAGATCCAAGCAAGAAAGCAGGTTGCTGTTATGCGGCAGGAAAAGACAGAAGCTGAGATTAAACAATTCCGGAAAAGCCTCAACTTCAAAGCAGCACCAATGCCTTCTTTCTACAATGTAGCTATGACTTCAGGGCCTGATGGAAACAAGGCTGCATCTACCAAATTCTCTAAAGTACAAGGCAAGTCAACAAGTCCAGGGAGTGGAGCTGCTGCAGGATTGGCCTCATATTCAGAGGTAGGAAAGGATGAAGATCCCACTGCTAGTGCTCCTGTAAGCACAACTGAATCACATGATGCCTCAGGAGAAACCAACTTATCCCAAGATACGAAAACAAAAAGTGAAGGCAGCAGGATGAAAGAAAAAGAGAAGGATGCTAGTGTGCAGAAACAGCGGTTGTTAGAAAGTGGTAAGGTGGCAAAAGGTCGGAAAAGTGAGGGGAAGCAGAAAGTGGGAGGCGAAAGAAATAACAGAGAGATGTCAAGGAAGGGTATGAAAGGCATCGGTTTCAGAAGCAGTTCCAGAATGGGTCATCTAACAGTTGGTGTTGCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

597

Amino Acids

65.94

Weight (kDa)

8.2

Isoelectric Point (pI)

49.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1243
AccB7I CCANNNNNTGG 1 cut(s) 1436
AccIII TCCGGA 1 cut(s) 1302
AciI CCGC 2 cut(s) 1267, 1627
AclWI GGATC 4 cut(s) 416, 812, 1231, 1481
AcsI RAATTY 6 cut(s) 235, 314, 508, 548, 829, 1397
AcuI CTGAAG 4 cut(s) 447, 678, 977, 1347
AfaI GTAC 3 cut(s) 259, 982, 1410
AfiI CCNNNNNNNGG 1 cut(s) 1436
AjnI CCWGG 3 cut(s) 166, 529, 1429
AloI GAACNNNNNNTCC 2 cut(s) 954, 986
AluBI AGCT 8 cut(s) 36, 191, 203, 665, 883, 1286, 1355, 1442
AluI AGCT 8 cut(s) 36, 191, 203, 665, 883, 1286, 1355, 1442
Alw21I GWGCWC 1 cut(s) 1504
Alw26I GTCTC 2 cut(s) 381, 569
AlwI GGATC 4 cut(s) 416, 812, 1231, 1481
AlwNI CAGNNNCTG 3 cut(s) 578, 1286, 1370
Ama87I CYCGRG 2 cut(s) 242, 1048
Aor13HI TCCGGA 1 cut(s) 1302
AoxI GGCC 3 cut(s) 768, 1367, 1455
ApeKI GCWGC 8 cut(s) 336, 608, 662, 1325, 1385, 1442, 1445, 1581
ApoI RAATTY 6 cut(s) 235, 314, 508, 548, 829, 1397
Asp700I GAANNNNTTC 2 cut(s) 796, 1750
AspS9I GGNCC 2 cut(s) 784, 1367
AsuC2I CCSGG 1 cut(s) 365
AsuHPI GGTGA 1 cut(s) 614
AsuII TTCGAA 1 cut(s) 84
AvaI CYCGRG 2 cut(s) 242, 1048
AvaII GGWCC 1 cut(s) 784
AxyI CCTNAGG 1 cut(s) 1534
BaeGI GKGCMC 1 cut(s) 857
BanII GRGCYC 1 cut(s) 365
BarI GAAGNNNNNNTAC 2 cut(s) 176, 208
BauI CACGAG 1 cut(s) 999
BbsI GAAGAC 1 cut(s) 215
Bbv12I GWGCWC 1 cut(s) 1504
BbvI GCAGC 8 cut(s) 348, 620, 674, 1337, 1372, 1429, 1432, 1593
BccI CCATC 4 cut(s) 362, 482, 913, 1367
BciT130I CCWGG 3 cut(s) 168, 531, 1431
BcnI CCSGG 1 cut(s) 365
BcoDI GTCTC 2 cut(s) 381, 569
BfaI CTAG 4 cut(s) 441, 948, 1497, 1611
BfmI CTRYAG 2 cut(s) 391, 1446
BfuAI ACCTGC 1 cut(s) 1243
BglII AGATCT 1 cut(s) 952
BisI GCNGC 9 cut(s) 337, 609, 663, 1268, 1326, 1386, 1443, 1446, 1582
BlsI GCNGC 9 cut(s) 338, 610, 664, 1269, 1327, 1387, 1444, 1447, 1583
Bme1390I CCNGG 4 cut(s) 168, 365, 531, 1431
Bme18I GGWCC 1 cut(s) 784
BmeT110I CYCGRG 2 cut(s) 242, 1048
BmgT120I GGNCC 2 cut(s) 784, 1367
BmiI GGNNCC 1 cut(s) 64
BmrFI CCNGG 4 cut(s) 168, 365, 531, 1431
BmsI GCATC 8 cut(s) 493, 595, 715, 818, 1397, 1519, 1597, 1743
BpiI GAAGAC 1 cut(s) 215
Bpu10I CCTNAGC 1 cut(s) 1215
Bpu14I TTCGAA 1 cut(s) 84
BpuMI CCSGG 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 1485
BsaJI CCNNGG 1 cut(s) 1430
BsaWI WCCGGW 1 cut(s) 1302
Bsc4I CCNNNNNNNGG 1 cut(s) 1436
Bse21I CCTNAGG 1 cut(s) 1534
Bse8I GATNNNNATC 1 cut(s) 1485
BseAI TCCGGA 1 cut(s) 1302
BseBI CCWGG 3 cut(s) 168, 531, 1431
BseDI CCNNGG 1 cut(s) 1430
BseGI GGATG 6 cut(s) 373, 475, 730, 1486, 1593, 1612
BseJI GATNNNNATC 1 cut(s) 1485
BseLI CCNNNNNNNGG 1 cut(s) 1436
BseMII CTCAG 6 cut(s) 461, 504, 794, 795, 1278, 1548
BseRI GAGGAG 1 cut(s) 877
BseSI GKGCMC 1 cut(s) 857
BseXI GCAGC 8 cut(s) 348, 620, 674, 1337, 1372, 1429, 1432, 1593
BsgI GTGCAG 1 cut(s) 1637
BshFI GGCC 3 cut(s) 770, 1369, 1457
BsiHKAI GWGCWC 1 cut(s) 1504
BsiHKCI CYCGRG 2 cut(s) 242, 1048
BsiSI CCGG 3 cut(s) 365, 1031, 1303
BslI CCNNNNNNNGG 1 cut(s) 1436
BsmAI GTCTC 2 cut(s) 381, 569
BsmI GAATGC 2 cut(s) 619, 1034
BsnI GGCC 3 cut(s) 770, 1369, 1457
BsoBI CYCGRG 2 cut(s) 242, 1048
Bsp119I TTCGAA 1 cut(s) 84
Bsp1286I GDGCHC 3 cut(s) 365, 857, 1504
Bsp13I TCCGGA 1 cut(s) 1302
Bsp143I GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
BspACI CCGC 2 cut(s) 1267, 1627
BspANI GGCC 3 cut(s) 770, 1369, 1457
BspCNI CTCAG 6 cut(s) 460, 505, 793, 796, 1279, 1547
BspEI TCCGGA 1 cut(s) 1302
BspHI TCATGA 2 cut(s) 973, 1787
BspLI GGNNCC 1 cut(s) 64
BspMAI CTGCAG 1 cut(s) 1450
BspMI ACCTGC 1 cut(s) 1243
BspPI GGATC 4 cut(s) 416, 812, 1231, 1481
BspT104I TTCGAA 1 cut(s) 84
BssECI CCNNGG 1 cut(s) 1430
BssMI GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
BssSI CACGAG 1 cut(s) 999
Bst2BI CACGAG 1 cut(s) 999
Bst2UI CCWGG 3 cut(s) 168, 531, 1431
Bst4CI ACNGT 2 cut(s) 392, 1774
Bst6I CTCTTC 1 cut(s) 138
BstAPI GCANNNNNTGC 1 cut(s) 614
BstBI TTCGAA 1 cut(s) 84
BstC8I GCNNGC 4 cut(s) 772, 1174, 1178, 1212
BstDEI CTNAG 9 cut(s) 447, 513, 666, 765, 780, 804, 1215, 1287, 1534
BstF5I GGATG 6 cut(s) 373, 475, 730, 1486, 1593, 1612
BstKTI GATC 8 cut(s) 116, 424, 820, 955, 1115, 1230, 1239, 1489
BstMAI GTCTC 2 cut(s) 381, 569
BstMBI GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
BstMWI GCNNNNNNNGC 3 cut(s) 614, 1454, 1624
BstNI CCWGG 3 cut(s) 168, 531, 1431
BstSCI CCNGG 4 cut(s) 166, 363, 529, 1429
BstSFI CTRYAG 2 cut(s) 391, 1446
BstSLI GKGCMC 1 cut(s) 857
BstV1I GCAGC 8 cut(s) 348, 620, 674, 1337, 1372, 1429, 1432, 1593
BstV2I GAAGAC 1 cut(s) 215
BstX2I RGATCY 5 cut(s) 421, 817, 952, 1236, 1486
BstXI CCANNNNNNTGG 1 cut(s) 1195
BstYI RGATCY 5 cut(s) 421, 817, 952, 1236, 1486
Bsu36I CCTNAGG 1 cut(s) 1534
BsuRI GGCC 3 cut(s) 770, 1369, 1457
BtsCI GGATG 6 cut(s) 373, 475, 730, 1486, 1593, 1612
BtsI GCAGTG 1 cut(s) 1491
BtsIMutI CAGTG 1 cut(s) 1491
BveI ACCTGC 1 cut(s) 1243
Cac8I GCNNGC 4 cut(s) 772, 1174, 1178, 1212
CaiI CAGNNNCTG 3 cut(s) 578, 1286, 1370
CciI TCATGA 2 cut(s) 973, 1787
Cfr13I GGNCC 2 cut(s) 784, 1367
CseI GACGC 1 cut(s) 930
CsiI ACCWGGT 1 cut(s) 166
Csp6I GTAC 3 cut(s) 258, 981, 1409
CviAII CATG 7 cut(s) 254, 323, 383, 974, 1189, 1526, 1788
CviQI GTAC 3 cut(s) 258, 981, 1409
DdeI CTNAG 9 cut(s) 447, 513, 666, 765, 780, 804, 1215, 1287, 1534
DpnI GATC 8 cut(s) 115, 423, 819, 954, 1114, 1229, 1238, 1488
DpnII GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
Eam1104I CTCTTC 1 cut(s) 138
EarI CTCTTC 1 cut(s) 138
Eco24I GRGCYC 1 cut(s) 365
Eco47I GGWCC 1 cut(s) 784
Eco57I CTGAAG 4 cut(s) 447, 678, 977, 1347
Eco81I CCTNAGG 1 cut(s) 1534
Eco88I CYCGRG 2 cut(s) 242, 1048
EcoO109I RGGNCCY 1 cut(s) 1367
EcoRI GAATTC 1 cut(s) 829
EcoRII CCWGG 3 cut(s) 166, 529, 1429
EcoT38I GRGCYC 1 cut(s) 365
FaeI CATG 7 cut(s) 257, 326, 386, 977, 1192, 1529, 1791
FalI AAGNNNNNCTT 2 cut(s) 784, 816
FatI CATG 7 cut(s) 253, 322, 382, 973, 1188, 1525, 1787
Fnu4HI GCNGC 9 cut(s) 337, 609, 663, 1268, 1326, 1386, 1443, 1446, 1582
FokI GGATG 6 cut(s) 380, 482, 737, 1493, 1600, 1619
FriOI GRGCYC 1 cut(s) 365
Fsp4HI GCNGC 9 cut(s) 337, 609, 663, 1268, 1326, 1386, 1443, 1446, 1582
FspBI CTAG 4 cut(s) 441, 948, 1497, 1611
GluI GCNGC 9 cut(s) 337, 609, 663, 1268, 1326, 1386, 1443, 1446, 1582
HaeIII GGCC 3 cut(s) 770, 1369, 1457
HapII CCGG 3 cut(s) 365, 1031, 1303
HgaI GACGC 1 cut(s) 930
Hin1II CATG 7 cut(s) 257, 326, 386, 977, 1192, 1529, 1791
HincII GTYRAC 1 cut(s) 1422
HindII GTYRAC 1 cut(s) 1422
HindIII AAGCTT 1 cut(s) 189
HinfI GANTC 9 cut(s) 47, 592, 623, 734, 756, 944, 995, 1086, 1520
HpaII CCGG 3 cut(s) 365, 1031, 1303
HphI GGTGA 1 cut(s) 614
Hpy166II GTNNAC 1 cut(s) 1422
Hpy8I GTNNAC 1 cut(s) 1422
HpyAV CCTTC 9 cut(s) 211, 326, 445, 715, 952, 1347, 1571, 1597, 1714
HpyCH4III ACNGT 2 cut(s) 392, 1774
HpyCH4V TGCA 8 cut(s) 506, 608, 728, 1124, 1210, 1388, 1448, 1618
HpyF10VI GCNNNNNNNGC 3 cut(s) 614, 1454, 1624
HpyF3I CTNAG 9 cut(s) 447, 513, 666, 765, 780, 804, 1215, 1287, 1534
Hsp92II CATG 7 cut(s) 257, 326, 386, 977, 1192, 1529, 1791
Kpn2I TCCGGA 1 cut(s) 1302
Kzo9I GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
LmnI GCTCC 2 cut(s) 1439, 1507
Lsp1109I GCAGC 8 cut(s) 348, 620, 674, 1337, 1372, 1429, 1432, 1593
LweI GCATC 8 cut(s) 493, 595, 715, 818, 1397, 1519, 1597, 1743
MabI ACCWGGT 1 cut(s) 166
MaeI CTAG 4 cut(s) 441, 948, 1497, 1611
MaeIII GTNAC 3 cut(s) 400, 542, 996
MalI GATC 8 cut(s) 115, 423, 819, 954, 1114, 1229, 1238, 1488
MboI GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
MflI RGATCY 5 cut(s) 421, 817, 952, 1236, 1486
MhlI GDGCHC 3 cut(s) 365, 857, 1504
MlyI GAGTC 4 cut(s) 41, 765, 1004, 1095
MmeI TCCRAC 2 cut(s) 1176, 1640
MroI TCCGGA 1 cut(s) 1302
MroXI GAANNNNTTC 2 cut(s) 796, 1750
MseI TTAA 5 cut(s) 180, 464, 639, 1077, 1293
MslI CAYNNNNRTG 2 cut(s) 327, 600
MspA1I CMGCKG 1 cut(s) 1627
MspI CCGG 3 cut(s) 365, 1031, 1303
MspR9I CCNGG 4 cut(s) 168, 365, 531, 1431
Mva1269I GAATGC 2 cut(s) 619, 1034
MvaI CCWGG 3 cut(s) 168, 531, 1431
MwoI GCNNNNNNNGC 3 cut(s) 614, 1454, 1624
NciI CCSGG 1 cut(s) 365
NdeII GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
NlaIII CATG 7 cut(s) 257, 326, 386, 977, 1192, 1529, 1791
NlaIV GGNNCC 1 cut(s) 64
NmuCI GTSAC 3 cut(s) 400, 542, 996
NspV TTCGAA 1 cut(s) 84
PagI TCATGA 2 cut(s) 973, 1787
PctI GAATGC 2 cut(s) 619, 1034
PdmI GAANNNNTTC 2 cut(s) 796, 1750
PfeI GAWTC 5 cut(s) 592, 623, 734, 944, 1520
PflFI GACNNNGTC 1 cut(s) 1099
PflMI CCANNNNNTGG 1 cut(s) 1436
PkrI GCNGC 9 cut(s) 338, 610, 664, 1269, 1327, 1387, 1444, 1447, 1583
PleI GAGTC 4 cut(s) 41, 764, 1003, 1094
PpsI GAGTC 4 cut(s) 41, 764, 1003, 1094
Psp6I CCWGG 3 cut(s) 166, 529, 1429
PspGI CCWGG 3 cut(s) 166, 529, 1429
PspN4I GGNNCC 1 cut(s) 64
PspPI GGNCC 2 cut(s) 784, 1367
PstI CTGCAG 1 cut(s) 1450
PstNI CAGNNNCTG 3 cut(s) 578, 1286, 1370
PsuI RGATCY 5 cut(s) 421, 817, 952, 1236, 1486
PsyI GACNNNGTC 1 cut(s) 1099
RsaI GTAC 3 cut(s) 259, 982, 1410
RsaNI GTAC 3 cut(s) 258, 981, 1409
RseI CAYNNNNRTG 2 cut(s) 327, 600
SaqAI TTAA 5 cut(s) 180, 464, 639, 1077, 1293
SatI GCNGC 9 cut(s) 337, 609, 663, 1268, 1326, 1386, 1443, 1446, 1582
Sau3AI GATC 8 cut(s) 113, 421, 817, 952, 1112, 1227, 1236, 1486
Sau96I GGNCC 2 cut(s) 784, 1367
SchI GAGTC 4 cut(s) 41, 765, 1004, 1095
ScrFI CCNGG 4 cut(s) 168, 365, 531, 1431
SduI GDGCHC 3 cut(s) 365, 857, 1504
SexAI ACCWGGT 1 cut(s) 166
SfaNI GCATC 8 cut(s) 493, 595, 715, 818, 1397, 1519, 1597, 1743
SfcI CTRYAG 2 cut(s) 391, 1446
SfuI TTCGAA 1 cut(s) 84
SinI GGWCC 1 cut(s) 784
SmiMI CAYNNNNRTG 2 cut(s) 327, 600
SsiI CCGC 2 cut(s) 1267, 1627
SspMI CTAG 4 cut(s) 441, 948, 1497, 1611
StyD4I CCNGG 4 cut(s) 166, 363, 529, 1429
TaaI ACNGT 2 cut(s) 392, 1774
TaqI TCGA 2 cut(s) 84, 486
TaqII GACCGA 1 cut(s) 419
TatI WGTACW 2 cut(s) 980, 1408
TauI GCSGC 1 cut(s) 1270
TfiI GAWTC 5 cut(s) 592, 623, 734, 944, 1520
Tru1I TTAA 5 cut(s) 180, 464, 639, 1077, 1293
Tru9I TTAA 5 cut(s) 180, 464, 639, 1077, 1293
TscAI CASTG 1 cut(s) 1498
TseFI GTSAC 3 cut(s) 400, 542, 996
TseI GCWGC 8 cut(s) 336, 608, 662, 1325, 1385, 1442, 1445, 1581
Tsp45I GTSAC 3 cut(s) 400, 542, 996
TspGWI ACGGA 2 cut(s) 874, 884
TspRI CASTG 1 cut(s) 1498
Tth111I GACNNNGTC 1 cut(s) 1099
Van91I CCANNNNNTGG 1 cut(s) 1436
VpaK11BI GGWCC 1 cut(s) 784
XapI RAATTY 6 cut(s) 235, 314, 508, 548, 829, 1397
XbaI TCTAGA 1 cut(s) 947
XmnI GAANNNNTTC 2 cut(s) 796, 1750
XspI CTAG 4 cut(s) 441, 948, 1497, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.