Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011558

Physical Location & Seq

Genomic Coordinates Forward (+)

32630626 .. 32632682

Gene Structure 2057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G350400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1155 bp

ATGGAGGAGGAGGGCTTGACTTATGATAATGTTGTGCTGAGAAGTTGTGACTTGGATCTGCTTAGAGGTCCACATTTCTTAAATGACAGCCTCATTGAATTCTACTTCAGCTATCTTTTTAATTCCCAATTACCAGACGGACATGATGATGATGATGATGATACCCAAATCCACTCGAAATCCAAAGATGACATCCTTCTGGTTCCACCTACACTCTCATATTGGCTAGCAAATTCCCTCGATTCTCAGAGTTTGAAAGGGTTTGAGGAGTCTCATAAGGTAGCCGAAAAGCAACTTGTTATTTTCACGGTCAATAATAATAAAAATGTGAGCCAAATTGATGGGGGAACACATTGGAGCTTGCTGGTGTTTTACAGAAAATCAAATACATTTGTGCATTATGACAGCTTCGGGGGGTTGAATCATTGGGATGCCAGAAAGCTTTATGGAGCAGTTAAACATGTGGGAGGAAGAATTAATATTACCACCTCTTCTTCTATTTCTAAAGCTACTGATACTACTACTACTACTACTACAACATCATCATCTTCTTCTTCTTCGACAATTCGATTTAGAGGTAATCATCACAAAAAATATATGAAAAGGGCAAGGAATATCAGAAGGGTTGGGATGATGTGCAGGGCGCCGCATTGGTTTCTCTATAACTTGATGGTCAAGGGAGTTCATGATGATGATGATGATGATGATGATGATGAAAGGAAAGCAGCAGCCCTTTGGGTGCCTCAGTGTCATCATGGTTACTTGAATACTCCACGTACTAGTAGTTACTATGTTGATGATAACAATGAGCCTTGTTTTAGAGAATTACCGACACCGCGGCAGACAAATCTTTATGATTGTGGTTTATATGTGATGGCCATTGCTAGAGTCATATGTCAATGGTACTGCGCGGGGGCCTCTAGTGCTACTGCTACTGCTACCCACGTGGATGACGAAGACGAAGGCCATGATGCTCGGTTTCCAAACATCATGAAGCATGTTGATAATTCTTTGGAATCGACAATGCGTTCTGAGTTGTTGGTCCTCGTTGAACAACTCAAATCTCATTCTACTGGCCTTGATGATCAGCCGCAGCCGCAGCCCCAACAAACTAGTATTCTATTATGTCATGATGCACTGTGCACAAGCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48 WRKY

Protein Analysis

385

Amino Acids

43.5

Weight (kDa)

5.48

Isoelectric Point (pI)

49.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011558)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g37251 FvH4_6g48790
malus_domestica	MD00G1127100.v1.1
prunus_persica	Prupe.1G350400_v2.0.a1 Prupe.1G350400_v2.0.a1
pyrus_communis	pycom16g00110
rosa_chinensis	RchiOBHm_Chr4g0447061
rosa_laevigata	RLG00000005608 RLG00000021798
rosa_multiflora	Rmu_co8291115.1_g000001 Rmu_co8439157.1_g000001 Rmu_sc0014071.1_g000004
rosa_roxburghii	Rroxscaffold_2G00082780 Rroxscaffold_5G00387380
rosa_rugosa	Rorug02G0534400
rosa_samantha	Rh2AG605300 Rh4BG448000 Rh4CG465100 Rh4DG446500
rosa_wichuraiana	Rw4G037550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	643, 739
AccII	CGCG	2 cut(s)	838, 911
AciI	CCGC	6 cut(s)	647, 836, 838, 911, 1091, 1097
AclWI	GGATC	1 cut(s)	63
AcoI	YGGCCR	1 cut(s)	876
AcsI	RAATTY	2 cut(s)	98, 232
AcuI	CTGAAG	1 cut(s)	91
AcvI	CACGTG	1 cut(s)	946
AcyI	GRCGYC	1 cut(s)	644
AfaI	GTAC	2 cut(s)	778, 905
AflIII	ACRYGT	1 cut(s)	460
AgsI	TTSAA	5 cut(s)	98, 256, 421, 766, 1052
AhlI	ACTAGT	2 cut(s)	779, 1112
AluBI	AGCT	5 cut(s)	111, 360, 408, 442, 509
AluI	AGCT	5 cut(s)	111, 360, 408, 442, 509
Alw21I	GWGCWC	1 cut(s)	1145
Alw26I	GTCTC	1 cut(s)	276
Alw44I	GTGCAC	1 cut(s)	1141
AlwI	GGATC	1 cut(s)	63
AoxI	GGCC	4 cut(s)	876, 915, 964, 1075
ApaLI	GTGCAC	1 cut(s)	1141
ApeKI	GCWGC	4 cut(s)	725, 728, 1093, 1099
ApoI	RAATTY	2 cut(s)	98, 232
AseI	ATTAAT	1 cut(s)	477
AspLEI	GCGC	2 cut(s)	646, 911
AspS9I	GGNCC	3 cut(s)	68, 915, 1042
AsuNHI	GCTAGC	1 cut(s)	226
AvaII	GGWCC	2 cut(s)	68, 1042
BaeGI	GKGCMC	1 cut(s)	1145
BalI	TGGCCA	1 cut(s)	878
BanI	GGYRCC	2 cut(s)	643, 739
BbrPI	CACGTG	1 cut(s)	946
BbsI	GAAGAC	1 cut(s)	963
Bbv12I	GWGCWC	1 cut(s)	1145
BbvI	GCAGC	4 cut(s)	737, 740, 1105, 1111
BccI	CCATC	3 cut(s)	335, 664, 868
BclI	TGATCA	1 cut(s)	1084
BcoDI	GTCTC	1 cut(s)	276
BcuI	ACTAGT	2 cut(s)	779, 1112
BfaI	CTAG	5 cut(s)	227, 780, 885, 921, 1113
BfoI	RGCGCY	1 cut(s)	647
BisI	GCNGC	8 cut(s)	647, 726, 729, 839, 1091, 1094, 1097, 1100
BlsI	GCNGC	8 cut(s)	648, 727, 730, 840, 1092, 1095, 1098, 1101
Bme18I	GGWCC	2 cut(s)	68, 1042
BmgT120I	GGNCC	3 cut(s)	68, 915, 1042
BmiI	GGNNCC	4 cut(s)	204, 645, 741, 916
BmsI	GCATC	3 cut(s)	421, 961, 1123
BmtI	GCTAGC	1 cut(s)	230
BpiI	GAAGAC	1 cut(s)	963
BsaAI	YACGTR	2 cut(s)	776, 946
BsaHI	GRCGYC	1 cut(s)	644
BsaJI	CCNNGG	1 cut(s)	836
Bse1I	ACTGG	1 cut(s)	1078
Bse3DI	GCAATG	1 cut(s)	879
BseDI	CCNNGG	1 cut(s)	836
BseGI	GGATG	4 cut(s)	192, 436, 636, 955
BseMI	GCAATG	1 cut(s)	879
BseMII	CTCAG	4 cut(s)	29, 260, 758, 1023
BseNI	ACTGG	1 cut(s)	1078
BseRI	GAGGAG	3 cut(s)	20, 23, 281
BseSI	GKGCMC	1 cut(s)	1145
BseXI	GCAGC	4 cut(s)	737, 740, 1105, 1111
BsgI	GTGCAG	1 cut(s)	658
Bsh1236I	CGCG	2 cut(s)	838, 911
BshFI	GGCC	4 cut(s)	878, 917, 966, 1077
BshNI	GGYRCC	2 cut(s)	643, 739
BsiHKAI	GWGCWC	1 cut(s)	1145
BsmAI	GTCTC	1 cut(s)	276
BsnI	GGCC	4 cut(s)	878, 917, 966, 1077
Bsp1286I	GDGCHC	1 cut(s)	1145
Bsp143I	GATC	2 cut(s)	55, 1084
BspACI	CCGC	6 cut(s)	647, 836, 838, 911, 1091, 1097
BspANI	GGCC	4 cut(s)	878, 917, 966, 1077
BspCNI	CTCAG	4 cut(s)	30, 259, 757, 1024
BspFNI	CGCG	2 cut(s)	838, 911
BspHI	TCATGA	3 cut(s)	685, 990, 1129
BspLI	GGNNCC	4 cut(s)	204, 645, 741, 916
BspOI	GCTAGC	1 cut(s)	230
BspPI	GGATC	1 cut(s)	63
BspT107I	GGYRCC	2 cut(s)	643, 739
BsrDI	GCAATG	1 cut(s)	879
BsrI	ACTGG	1 cut(s)	1078
BssECI	CCNNGG	1 cut(s)	836
BssMI	GATC	2 cut(s)	55, 1084
BssNI	GRCGYC	1 cut(s)	644
Bst4CI	ACNGT	2 cut(s)	310, 1140
Bst6I	CTCTTC	1 cut(s)	496
BstACI	GRCGYC	1 cut(s)	644
BstBAI	YACGTR	2 cut(s)	776, 946
BstC8I	GCNNGC	2 cut(s)	228, 362
BstDEI	CTNAG	5 cut(s)	38, 62, 246, 744, 1032
BstDSI	CCRYGG	1 cut(s)	836
BstF5I	GGATG	4 cut(s)	192, 436, 636, 955
BstFNI	CGCG	2 cut(s)	838, 911
BstH2I	RGCGCY	1 cut(s)	647
BstHHI	GCGC	2 cut(s)	646, 911
BstKTI	GATC	2 cut(s)	58, 1087
BstMAI	GTCTC	1 cut(s)	276
BstMBI	GATC	2 cut(s)	55, 1084
BstMWI	GCNNNNNNNGC	3 cut(s)	923, 1096, 1099
BstNSI	RCATGY	2 cut(s)	464, 1001
BstSLI	GKGCMC	1 cut(s)	1145
BstUI	CGCG	2 cut(s)	838, 911
BstV1I	GCAGC	4 cut(s)	737, 740, 1105, 1111
BstV2I	GAAGAC	1 cut(s)	963
BstX2I	RGATCY	1 cut(s)	55
BstXI	CCANNNNNNTGG	1 cut(s)	341
BstYI	RGATCY	1 cut(s)	55
BsuRI	GGCC	4 cut(s)	878, 917, 966, 1077
BtgI	CCRYGG	1 cut(s)	836
BtsCI	GGATG	4 cut(s)	192, 436, 636, 955
BtsIMutI	CAGTG	2 cut(s)	752, 1136
Cac8I	GCNNGC	2 cut(s)	228, 362
CciI	TCATGA	3 cut(s)	685, 990, 1129
CfoI	GCGC	2 cut(s)	646, 911
Cfr13I	GGNCC	3 cut(s)	68, 915, 1042
Cfr42I	CCGCGG	1 cut(s)	839
Csp6I	GTAC	2 cut(s)	777, 904
CviAII	CATG	8 cut(s)	143, 461, 686, 755, 968, 991, 998, 1130
CviQI	GTAC	2 cut(s)	777, 904
DdeI	CTNAG	5 cut(s)	38, 62, 246, 744, 1032
DinI	GGCGCC	1 cut(s)	645
DpnI	GATC	2 cut(s)	57, 1086
DpnII	GATC	2 cut(s)	55, 1084
EaeI	YGGCCR	1 cut(s)	876
Eam1104I	CTCTTC	1 cut(s)	496
EarI	CTCTTC	1 cut(s)	496
Eco47I	GGWCC	2 cut(s)	68, 1042
Eco57I	CTGAAG	1 cut(s)	91
Eco72I	CACGTG	1 cut(s)	946
EcoO109I	RGGNCCY	1 cut(s)	915
EcoRI	GAATTC	1 cut(s)	98
EgeI	GGCGCC	1 cut(s)	645
EheI	GGCGCC	1 cut(s)	645
FaeI	CATG	8 cut(s)	146, 464, 689, 758, 971, 994, 1001, 1133
FatI	CATG	8 cut(s)	142, 460, 685, 754, 967, 990, 997, 1129
FauI	CCCGC	1 cut(s)	904
FauNDI	CATATG	1 cut(s)	893
FbaI	TGATCA	1 cut(s)	1084
Fnu4HI	GCNGC	8 cut(s)	647, 726, 729, 839, 1091, 1094, 1097, 1100
FokI	GGATG	4 cut(s)	179, 443, 643, 962
Fsp4HI	GCNGC	8 cut(s)	647, 726, 729, 839, 1091, 1094, 1097, 1100
FspBI	CTAG	5 cut(s)	227, 780, 885, 921, 1113
GlaI	GCGC	2 cut(s)	645, 910
GluI	GCNGC	8 cut(s)	647, 726, 729, 839, 1091, 1094, 1097, 1100
HaeII	RGCGCY	1 cut(s)	647
HaeIII	GGCC	4 cut(s)	878, 917, 966, 1077
HhaI	GCGC	2 cut(s)	646, 911
Hin1I	GRCGYC	1 cut(s)	644
Hin1II	CATG	8 cut(s)	146, 464, 689, 758, 971, 994, 1001, 1133
Hin6I	GCGC	2 cut(s)	644, 909
HinP1I	GCGC	2 cut(s)	644, 909
HindIII	AAGCTT	1 cut(s)	440
HinfI	GANTC	5 cut(s)	242, 269, 421, 888, 1016
Hpy166II	GTNNAC	2 cut(s)	71, 1143
Hpy188I	TCNGA	3 cut(s)	249, 620, 1033
Hpy188III	TCNNGA	3 cut(s)	686, 991, 1130
Hpy8I	GTNNAC	2 cut(s)	71, 1143
HpyAV	CCTTC	3 cut(s)	206, 615, 956
HpyCH4III	ACNGT	2 cut(s)	310, 1140
HpyCH4IV	ACGT	2 cut(s)	775, 945
HpyCH4V	TGCA	4 cut(s)	397, 639, 1136, 1143
HpyF10VI	GCNNNNNNNGC	3 cut(s)	923, 1096, 1099
HpyF3I	CTNAG	5 cut(s)	38, 62, 246, 744, 1032
HpySE526I	ACGT	2 cut(s)	775, 945
Hsp92I	GRCGYC	1 cut(s)	644
Hsp92II	CATG	8 cut(s)	146, 464, 689, 758, 971, 994, 1001, 1133
HspAI	GCGC	2 cut(s)	644, 909
KasI	GGCGCC	1 cut(s)	643
Ksp22I	TGATCA	1 cut(s)	1084
KspI	CCGCGG	1 cut(s)	839
Kzo9I	GATC	2 cut(s)	55, 1084
LmnI	GCTCC	2 cut(s)	357, 449
LpnPI	CCDG	6 cut(s)	147, 185, 350, 448, 625, 1059
Lsp1109I	GCAGC	4 cut(s)	737, 740, 1105, 1111
LweI	GCATC	3 cut(s)	421, 961, 1123
MaeI	CTAG	5 cut(s)	227, 780, 885, 921, 1113
MaeII	ACGT	2 cut(s)	775, 945
MaeIII	GTNAC	3 cut(s)	47, 758, 785
MalI	GATC	2 cut(s)	57, 1086
MboI	GATC	2 cut(s)	55, 1084
MboII	GAAGA	8 cut(s)	483, 483, 486, 540, 543, 546, 549, 968
MflI	RGATCY	1 cut(s)	55
MhlI	GDGCHC	1 cut(s)	1145
MlsI	TGGCCA	1 cut(s)	878
MluCI	AATT	9 cut(s)	98, 121, 128, 232, 336, 474, 564, 824, 1006
MluNI	TGGCCA	1 cut(s)	878
Mly113I	GGCGCC	1 cut(s)	644
MlyI	GAGTC	2 cut(s)	278, 897
Mox20I	TGGCCA	1 cut(s)	878
MscI	TGGCCA	1 cut(s)	878
MseI	TTAA	4 cut(s)	80, 120, 456, 477
MslI	CAYNNNNRTG	4 cut(s)	147, 429, 690, 948
Msp20I	TGGCCA	1 cut(s)	878
MspA1I	CMGCKG	1 cut(s)	838
MvnI	CGCG	2 cut(s)	838, 911
MwoI	GCNNNNNNNGC	3 cut(s)	923, 1096, 1099
NarI	GGCGCC	1 cut(s)	644
NdeI	CATATG	1 cut(s)	893
NdeII	GATC	2 cut(s)	55, 1084
NheI	GCTAGC	1 cut(s)	226
NlaIII	CATG	8 cut(s)	146, 464, 689, 758, 971, 994, 1001, 1133
NlaIV	GGNNCC	4 cut(s)	204, 645, 741, 916
NmuCI	GTSAC	1 cut(s)	47
NspI	RCATGY	2 cut(s)	464, 1001
PagI	TCATGA	3 cut(s)	685, 990, 1129
PciI	ACATGT	1 cut(s)	460
PcsI	WCGNNNNNNNCGW	1 cut(s)	951
PfeI	GAWTC	3 cut(s)	242, 421, 1016
PkrI	GCNGC	8 cut(s)	648, 727, 730, 840, 1092, 1095, 1098, 1101
PleI	GAGTC	2 cut(s)	277, 896
PluTI	GGCGCC	1 cut(s)	647
PmaCI	CACGTG	1 cut(s)	946
PmlI	CACGTG	1 cut(s)	946
PpsI	GAGTC	2 cut(s)	277, 896
Ppu21I	YACGTR	2 cut(s)	776, 946
PscI	ACATGT	1 cut(s)	460
PshBI	ATTAAT	1 cut(s)	477
PspCI	CACGTG	1 cut(s)	946
PspN4I	GGNNCC	4 cut(s)	204, 645, 741, 916
PspPI	GGNCC	3 cut(s)	68, 915, 1042
PsuI	RGATCY	1 cut(s)	55
RsaI	GTAC	2 cut(s)	778, 905
RsaNI	GTAC	2 cut(s)	777, 904
RseI	CAYNNNNRTG	4 cut(s)	147, 429, 690, 948
SacII	CCGCGG	1 cut(s)	839
SaqAI	TTAA	4 cut(s)	80, 120, 456, 477
SatI	GCNGC	8 cut(s)	647, 726, 729, 839, 1091, 1094, 1097, 1100
Sau3AI	GATC	2 cut(s)	55, 1084
Sau96I	GGNCC	3 cut(s)	68, 915, 1042
SchI	GAGTC	2 cut(s)	278, 897
SduI	GDGCHC	1 cut(s)	1145
SfaNI	GCATC	3 cut(s)	421, 961, 1123
SfoI	GGCGCC	1 cut(s)	645
Sfr303I	CCGCGG	1 cut(s)	839
SgrBI	CCGCGG	1 cut(s)	839
SinI	GGWCC	2 cut(s)	68, 1042
SmiMI	CAYNNNNRTG	4 cut(s)	147, 429, 690, 948
SpeI	ACTAGT	2 cut(s)	779, 1112
Sse9I	AATT	9 cut(s)	98, 121, 128, 232, 336, 474, 564, 824, 1006
SsiI	CCGC	6 cut(s)	647, 836, 838, 911, 1091, 1097
SspDI	GGCGCC	1 cut(s)	643
SspI	AATATT	1 cut(s)	481
SspMI	CTAG	5 cut(s)	227, 780, 885, 921, 1113
TaaI	ACNGT	2 cut(s)	310, 1140
TaiI	ACGT	2 cut(s)	778, 948
TaqI	TCGA	5 cut(s)	176, 240, 560, 568, 1019
TasI	AATT	9 cut(s)	98, 121, 128, 232, 336, 474, 564, 824, 1006
TauI	GCSGC	4 cut(s)	649, 841, 1093, 1099
TfiI	GAWTC	3 cut(s)	242, 421, 1016
Tru1I	TTAA	4 cut(s)	80, 120, 456, 477
Tru9I	TTAA	4 cut(s)	80, 120, 456, 477
TscAI	CASTG	2 cut(s)	752, 1143
TseFI	GTSAC	1 cut(s)	47
TseI	GCWGC	4 cut(s)	725, 728, 1093, 1099
Tsp45I	GTSAC	1 cut(s)	47
TspDTI	ATGAA	4 cut(s)	614, 674, 729, 1007
TspGWI	ACGGA	1 cut(s)	153
TspRI	CASTG	2 cut(s)	752, 1143
VneI	GTGCAC	1 cut(s)	1141
VpaK11BI	GGWCC	2 cut(s)	68, 1042
VspI	ATTAAT	1 cut(s)	477
XapI	RAATTY	2 cut(s)	98, 232
XceI	RCATGY	2 cut(s)	464, 1001
XspI	CTAG	5 cut(s)	227, 780, 885, 921, 1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.