Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001010

Physical Location & Seq

Genomic Coordinates Forward (+)

33749607 .. 33751040

Gene Structure 1434 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G369600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 411 bp

ATGGCTCGTACCAAACAGACTGCTCGCAAATCAACCGGTGGTAAGGCTCCGAGGAAACAACTCGCCACCAAGGCTGCTAGGAAATCAGCACCAACAACTGGTGGAGTCAAGAAGCCTCACCGTTACCGCCCTGGAACCGTTGCTCTTCGTGAAATTCGCAAGTACCAGAAGAGTACTGAGCTTCTGATCCGCAAGCTGCCTTTCCAACGCCTGGTTCGTGAAATCGCTCAAGACTTCAAGACCGACCTCAGGTTTCAGAGTCATGCTGTGCTTGCGCTTCAGGAAGCTGCAGAGGCCTACTTGGTGGGTCTGTTCGAGGACACCAACCTGTGCGCCATCCATGCCAAGAGGGTGACAATCATGCCCAAGGACATTCAGCTTGCTAGGCGCATCCGTGGCGAACGTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0031490 GO:0031491 GO:0031492 GO:0031497 GO:0032991 GO:0032993 GO:0034622 GO:0034728 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044815 GO:0044877 GO:0051276 GO:0065003 GO:0065004 GO:0071103 GO:0071824 GO:0071840 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko05034 ko05202 ko05322 map05034 map05202 map05322

Pfam Domains

Protein Families

Histone

Protein Analysis

137

Amino Acids

15.41

Weight (kDa)

11.15

Isoelectric Point (pI)

38.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G40030 AT4G40030 AT4G40030 AT4G40040 AT4G40040 AT4G40040 AT5G10980
fragaria_vesca	FvH4_1g20270 FvH4_1g28601 FvH4_1g29790 FvH4_5g36680
malus_domestica	MD01G1035300.v1.1 MD15G1320600.v1.1 MD15G1373700.v1.1
prunus_persica	Prupe.1G369600_v2.0.a1 Prupe.1G522300_v2.0.a1 Prupe.1G522300_v2.0.a1 Prupe.6G192700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0112411 RchiOBHm_Chr3g0495821 RchiOBHm_Chr6g0302291 RchiOBHm_Chr6g0302361 RchiOBHm_Chr7g0242651
rosa_laevigata	RLG00000011180 RLG00000017978 RLG00000022586 RLG00000022760 RLG00000022761
rosa_multiflora	Rmu_sc0003633.1_g000017 Rmu_ssc0000254.1_g000002
rosa_roxburghii	Rroxscaffold_2G00131460 Rroxscaffold_3G00222610 Rroxscaffold_6G00392220
rosa_rugosa	Rorug03G0254300 Rorug03G0276700 Rorug06G0313800 Rorug07G0315900 Rorug07G0316000
rosa_samantha	Rh2AG233800 Rh2BG247000 Rh2CG238100 Rh2DG241300 Rh3AG304900 Rh3AG324000 Rh3BG340700 Rh3BG340800 Rh3BG360000 Rh3DG339900 Rh3DG359400 Rh6AG426500 Rh6BG476000 Rh6BG476100 Rh6DG425900 Rh6DG426000 Rh7AG471000 Rh7BG441300
rosa_wichuraiana	Rw0G005470 Rw2G018090 Rw3G026860 Rw3G028330 Rw7G039260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	98, 211
AciI	CCGC	2 cut(s)	127, 190
AclWI	GGATC	1 cut(s)	181
AcsI	RAATTY	1 cut(s)	153
AcuI	CTGAAG	1 cut(s)	263
AfaI	GTAC	3 cut(s)	10, 164, 175
AfiI	CCNNNNNNNGG	3 cut(s)	98, 211, 249
AgeI	ACCGGT	1 cut(s)	35
AgsI	TTSAA	1 cut(s)	238
AjnI	CCWGG	2 cut(s)	130, 210
AjuI	GAANNNNNNNTTGG	2 cut(s)	198, 230
AluBI	AGCT	4 cut(s)	181, 196, 287, 379
AluI	AGCT	4 cut(s)	181, 196, 287, 379
AlwI	GGATC	1 cut(s)	181
AoxI	GGCC	1 cut(s)	294
ApeKI	GCWGC	3 cut(s)	74, 196, 287
ApoI	RAATTY	1 cut(s)	153
AsiGI	ACCGGT	1 cut(s)	35
AspLEI	GCGC	3 cut(s)	277, 335, 390
AsuHPI	GGTGA	2 cut(s)	110, 364
AxyI	CCTNAGG	1 cut(s)	248
BbvI	GCAGC	3 cut(s)	61, 183, 274
BccI	CCATC	1 cut(s)	344
BciT130I	CCWGG	2 cut(s)	132, 212
BfaI	CTAG	2 cut(s)	78, 384
BfmI	CTRYAG	1 cut(s)	288
BglI	GCCNNNNNGGC	1 cut(s)	71
BisI	GCNGC	3 cut(s)	75, 197, 288
BlsI	GCNGC	3 cut(s)	76, 198, 289
BmcAI	AGTACT	1 cut(s)	175
Bme1390I	CCNGG	2 cut(s)	132, 212
BmiI	GGNNCC	2 cut(s)	48, 136
BmrFI	CCNGG	2 cut(s)	132, 212
BmsI	GCATC	1 cut(s)	399
BpuEI	CTTGAG	1 cut(s)	213
BsaJI	CCNNGG	5 cut(s)	50, 69, 130, 366, 394
BsaWI	WCCGGW	1 cut(s)	35
Bsc4I	CCNNNNNNNGG	3 cut(s)	98, 211, 249
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	1 cut(s)	103
Bse21I	CCTNAGG	1 cut(s)	248
BseBI	CCWGG	2 cut(s)	132, 212
BseDI	CCNNGG	5 cut(s)	50, 69, 130, 366, 394
BseGI	GGATG	2 cut(s)	336, 390
BseLI	CCNNNNNNNGG	3 cut(s)	98, 211, 249
BseMII	CTCAG	2 cut(s)	168, 262
BseNI	ACTGG	1 cut(s)	103
BseXI	GCAGC	3 cut(s)	61, 183, 274
BshFI	GGCC	1 cut(s)	296
BshTI	ACCGGT	1 cut(s)	35
BsiSI	CCGG	1 cut(s)	36
BslI	CCNNNNNNNGG	3 cut(s)	98, 211, 249
BsnI	GGCC	1 cut(s)	296
Bsp143I	GATC	1 cut(s)	186
BspACI	CCGC	2 cut(s)	127, 190
BspANI	GGCC	1 cut(s)	296
BspCNI	CTCAG	2 cut(s)	169, 261
BspLI	GGNNCC	2 cut(s)	48, 136
BspMAI	CTGCAG	1 cut(s)	292
BspPI	GGATC	1 cut(s)	181
BspQI	GCTCTTC	1 cut(s)	150
BsrFI	RCCGGY	1 cut(s)	35
BsrI	ACTGG	1 cut(s)	103
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	5 cut(s)	50, 69, 130, 366, 394
BssMI	GATC	1 cut(s)	186
BssT1I	CCWWGG	2 cut(s)	69, 366
Bst2UI	CCWGG	2 cut(s)	132, 212
Bst4CI	ACNGT	2 cut(s)	122, 139
Bst6I	CTCTTC	2 cut(s)	150, 164
BstC8I	GCNNGC	4 cut(s)	25, 194, 273, 381
BstDEI	CTNAG	2 cut(s)	177, 248
BstDSI	CCRYGG	1 cut(s)	394
BstF5I	GGATG	2 cut(s)	336, 390
BstHHI	GCGC	3 cut(s)	277, 335, 390
BstKTI	GATC	1 cut(s)	189
BstMBI	GATC	1 cut(s)	186
BstMWI	GCNNNNNNNGC	6 cut(s)	71, 272, 293, 341, 385, 396
BstNI	CCWGG	2 cut(s)	132, 212
BstSCI	CCNGG	2 cut(s)	130, 210
BstSFI	CTRYAG	1 cut(s)	288
BstV1I	GCAGC	3 cut(s)	61, 183, 274
Bsu36I	CCTNAGG	1 cut(s)	248
BsuRI	GGCC	1 cut(s)	296
BtgI	CCRYGG	1 cut(s)	394
BtsCI	GGATG	2 cut(s)	336, 390
Cac8I	GCNNGC	4 cut(s)	25, 194, 273, 381
CfoI	GCGC	3 cut(s)	277, 335, 390
Cfr10I	RCCGGY	1 cut(s)	35
Csp6I	GTAC	3 cut(s)	9, 163, 174
CspAI	ACCGGT	1 cut(s)	35
CviAII	CATG	3 cut(s)	263, 341, 361
CviJI	RGCY	9 cut(s)	5, 47, 74, 115, 181, 196, 287, 296, 379
CviKI_1	RGCY	9 cut(s)	5, 47, 74, 115, 181, 196, 287, 296, 379
CviQI	GTAC	3 cut(s)	9, 163, 174
DdeI	CTNAG	2 cut(s)	177, 248
DpnI	GATC	1 cut(s)	188
DpnII	GATC	1 cut(s)	186
Eam1104I	CTCTTC	2 cut(s)	150, 164
EarI	CTCTTC	2 cut(s)	150, 164
Eco130I	CCWWGG	2 cut(s)	69, 366
Eco147I	AGGCCT	1 cut(s)	296
Eco57I	CTGAAG	1 cut(s)	263
Eco81I	CCTNAGG	1 cut(s)	248
EcoRII	CCWGG	2 cut(s)	130, 210
EcoT14I	CCWWGG	2 cut(s)	69, 366
ErhI	CCWWGG	2 cut(s)	69, 366
FaeI	CATG	3 cut(s)	266, 344, 364
FaiI	YATR	3 cut(s)	264, 342, 362
FatI	CATG	3 cut(s)	262, 340, 360
Fnu4HI	GCNGC	3 cut(s)	75, 197, 288
FokI	GGATG	2 cut(s)	323, 377
Fsp4HI	GCNGC	3 cut(s)	75, 197, 288
FspBI	CTAG	2 cut(s)	78, 384
GlaI	GCGC	3 cut(s)	276, 334, 389
GluI	GCNGC	3 cut(s)	75, 197, 288
HaeIII	GGCC	1 cut(s)	296
HapII	CCGG	1 cut(s)	36
HhaI	GCGC	3 cut(s)	277, 335, 390
Hin1II	CATG	3 cut(s)	266, 344, 364
Hin6I	GCGC	3 cut(s)	275, 333, 388
HinP1I	GCGC	3 cut(s)	275, 333, 388
HinfI	GANTC	2 cut(s)	105, 259
HpaII	CCGG	1 cut(s)	36
HphI	GGTGA	2 cut(s)	110, 364
Hpy188I	TCNGA	3 cut(s)	51, 186, 258
Hpy188III	TCNNGA	6 cut(s)	109, 149, 218, 230, 238, 281
HpyCH4III	ACNGT	2 cut(s)	122, 139
HpyCH4IV	ACGT	1 cut(s)	403
HpyCH4V	TGCA	1 cut(s)	290
HpyF10VI	GCNNNNNNNGC	6 cut(s)	71, 272, 293, 341, 385, 396
HpyF3I	CTNAG	2 cut(s)	177, 248
HpySE526I	ACGT	1 cut(s)	403
Hsp92II	CATG	3 cut(s)	266, 344, 364
HspAI	GCGC	3 cut(s)	275, 333, 388
Kzo9I	GATC	1 cut(s)	186
LguI	GCTCTTC	1 cut(s)	150
LmnI	GCTCC	1 cut(s)	52
Lsp1109I	GCAGC	3 cut(s)	61, 183, 274
LweI	GCATC	1 cut(s)	399
MaeI	CTAG	2 cut(s)	78, 384
MaeII	ACGT	1 cut(s)	403
MaeIII	GTNAC	2 cut(s)	122, 352
MalI	GATC	1 cut(s)	188
MboI	GATC	1 cut(s)	186
MboII	GAAGA	2 cut(s)	137, 181
MluCI	AATT	1 cut(s)	153
MlyI	GAGTC	2 cut(s)	114, 268
MmeI	TCCRAC	1 cut(s)	229
MnlI	CCTC	6 cut(s)	45, 126, 257, 286, 310, 342
MseI	TTAA	1 cut(s)	409
MspI	CCGG	1 cut(s)	36
MspR9I	CCNGG	2 cut(s)	132, 212
MvaI	CCWGG	2 cut(s)	132, 212
MwoI	GCNNNNNNNGC	6 cut(s)	71, 272, 293, 341, 385, 396
NdeII	GATC	1 cut(s)	186
NlaIII	CATG	3 cut(s)	266, 344, 364
NlaIV	GGNNCC	2 cut(s)	48, 136
NmuCI	GTSAC	1 cut(s)	352
PceI	AGGCCT	1 cut(s)	296
PciSI	GCTCTTC	1 cut(s)	150
PcsI	WCGNNNNNNNCGW	1 cut(s)	214
PflMI	CCANNNNNTGG	2 cut(s)	98, 211
PinAI	ACCGGT	1 cut(s)	35
PkrI	GCNGC	3 cut(s)	76, 198, 289
PleI	GAGTC	2 cut(s)	113, 267
PpsI	GAGTC	2 cut(s)	113, 267
Psp6I	CCWGG	2 cut(s)	130, 210
PspGI	CCWGG	2 cut(s)	130, 210
PspN4I	GGNNCC	2 cut(s)	48, 136
PstI	CTGCAG	1 cut(s)	292
RsaI	GTAC	3 cut(s)	10, 164, 175
RsaNI	GTAC	3 cut(s)	9, 163, 174
SapI	GCTCTTC	1 cut(s)	150
SaqAI	TTAA	1 cut(s)	409
SatI	GCNGC	3 cut(s)	75, 197, 288
Sau3AI	GATC	1 cut(s)	186
ScaI	AGTACT	1 cut(s)	175
SchI	GAGTC	2 cut(s)	114, 268
ScrFI	CCNGG	2 cut(s)	132, 212
SetI	ASST	8 cut(s)	183, 198, 249, 254, 289, 330, 381, 406
SfaNI	GCATC	1 cut(s)	399
SfcI	CTRYAG	1 cut(s)	288
SmlI	CTYRAG	1 cut(s)	228
SmoI	CTYRAG	1 cut(s)	228
Sse9I	AATT	1 cut(s)	153
SseBI	AGGCCT	1 cut(s)	296
SsiI	CCGC	2 cut(s)	127, 190
SspMI	CTAG	2 cut(s)	78, 384
StuI	AGGCCT	1 cut(s)	296
StyD4I	CCNGG	2 cut(s)	130, 210
StyI	CCWWGG	2 cut(s)	69, 366
TaaI	ACNGT	2 cut(s)	122, 139
TaiI	ACGT	1 cut(s)	406
TaqI	TCGA	1 cut(s)	315
TaqII	GACCGA	1 cut(s)	257
TasI	AATT	1 cut(s)	153
TatI	WGTACW	1 cut(s)	173
Tru1I	TTAA	1 cut(s)	409
Tru9I	TTAA	1 cut(s)	409
TseFI	GTSAC	1 cut(s)	352
TseI	GCWGC	3 cut(s)	74, 196, 287
Tsp45I	GTSAC	1 cut(s)	352
TspGWI	ACGGA	1 cut(s)	383
Van91I	CCANNNNNTGG	2 cut(s)	98, 211
XapI	RAATTY	1 cut(s)	153
XspI	CTAG	2 cut(s)	78, 384
ZrmI	AGTACT	1 cut(s)	175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.