Prupe.1G372600_v2.0.a1

LON peptidase N-terminal domain and RING finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0008497
Physical Location & Seq
Reverse (-)
33916075 .. 33917540
1466 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G372600.1

Sequence Viewer

Length: 855 bp
ATGGCTCTTCCCCAGCTCATTCCCTCATCTTCTTCTTCTCTACACCATAAACCCATCTTCAACCCCAATCCCATCCCCTCCCCCTTAAACCCTAACCCTAATTTCCTCTCTCCCCGTCTTCGCCGCAGCCACCACCACCGCCGCCAAAGACCGGGTTCTCTGAAATGCTCGGCCTCGTCCTTCTCTGAGAGGCACCCCACCAATCAGCCCAAGTCAGACGATGTCGTCGAGCTCCCGCTCTTTCCTCTGCCTCTGGTGCTCTTCCCCGGCGCAATCTTGCCCCTGCAGATCTTCGAGTTCCGGTACCGTATGATGATGCACTCTCTCCTCCAGACCGATCTCCGCTTCGGCGTCATCTACAGCGACGCCGTTTCGGGCACCTCCGACGTCGGCTGCGTCGGCGAGATCGTCAAGCACGAGCGCCTCGTGGACGACCGCTTCTTCCTCATCTGCAAAGGCCAAGAACGTTTCCGAGTCACCGACCTCGTGCGCACCAAACCCTACCTGGTGGCGGAGGTGAAGTGGCTCGAAGACCGCCCGTCGAACGACGGCGATGAAGACCTGGAGGCATTGGCGAACGAGGTGGAGTCGTACATGAAGGACGTGATTCGGTTGTCGAACCGGTTGGGAGGGAAGCCGGAGAAGGATGTGCAGGACCTGAGGAGGAACCTGTTTCCGACACCGTTTTCGTTCTTCGTCGGGAGCACGTTCGAAGGGGCGCCGAGAGAGCAGCAGGCCTTGCTGGAATTGGAGGACACGGCGGCAAGGTTGAAGAGAGAGAAGGAGACTCTGAGGAACACGCTTAATTACTTGACGGCGGCTTCGGCCGTCAAAGACGTCTTCCCGTCGACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LON_substr_bdg

Protein Analysis

285

Amino Acids

32.29

Weight (kDa)

7.78

Isoelectric Point (pI)

48.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
AatII GACGTC 2 cut(s) 390, 840
Acc16I TGCGCA 1 cut(s) 491
Acc65I GGTACC 1 cut(s) 303
AccB1I GGYRCC 4 cut(s) 192, 303, 377, 718
AccBSI CCGCTC 1 cut(s) 238
AccI GTMKAC 1 cut(s) 848
AclI AACGTT 1 cut(s) 466
AcoI YGGCCR 1 cut(s) 825
AcyI GRCGYC 5 cut(s) 351, 366, 387, 719, 837
AfaI GTAC 2 cut(s) 305, 593
AfiI CCNNNNNNNGG 2 cut(s) 151, 511
AgeI ACCGGT 1 cut(s) 621
AgsI TTSAA 2 cut(s) 61, 772
AhdI GACNNNNNGTC 1 cut(s) 538
AjiI CACGTC 2 cut(s) 604, 852
AjnI CCWGG 2 cut(s) 504, 561
AluBI AGCT 2 cut(s) 16, 232
AluI AGCT 2 cut(s) 16, 232
Alw21I GWGCWC 3 cut(s) 234, 261, 707
Alw26I GTCTC 1 cut(s) 779
AlwNI CAGNNNCTG 1 cut(s) 658
AoxI GGCC 4 cut(s) 171, 457, 735, 825
ApeKI GCWGC 3 cut(s) 126, 393, 730
ArsI GACNNNNNNTTYG 4 cut(s) 670, 702, 805, 837
AsiGI ACCGGT 1 cut(s) 621
Asp718I GGTACC 1 cut(s) 303
AspLEI GCGC 4 cut(s) 272, 423, 492, 721
AspS9I GGNCC 1 cut(s) 655
AsuC2I CCSGG 2 cut(s) 153, 267
AsuHPI GGTGA 2 cut(s) 469, 529
AsuII TTCGAA 1 cut(s) 711
AvaII GGWCC 1 cut(s) 655
AxyI CCTNAGG 1 cut(s) 659
BaeGI GKGCMC 1 cut(s) 380
BanI GGYRCC 4 cut(s) 192, 303, 377, 718
BanII GRGCYC 1 cut(s) 234
BauI CACGAG 3 cut(s) 416, 425, 485
BbsI GAAGAC 4 cut(s) 110, 537, 564, 832
Bbv12I GWGCWC 3 cut(s) 234, 261, 707
BbvI GCAGC 3 cut(s) 138, 380, 742
BccI CCATC 2 cut(s) 62, 80
BceAI ACGGC 5 cut(s) 353, 565, 774, 812, 831
BciT130I CCWGG 2 cut(s) 506, 563
BcnI CCSGG 2 cut(s) 153, 267
BcoDI GTCTC 1 cut(s) 779
BfmI CTRYAG 2 cut(s) 284, 358
BfoI RGCGCY 2 cut(s) 424, 722
BglII AGATCT 1 cut(s) 288
BisI GCNGC 7 cut(s) 124, 127, 142, 394, 731, 762, 819
BlsI GCNGC 7 cut(s) 125, 128, 143, 395, 732, 763, 820
Bme1390I CCNGG 4 cut(s) 153, 267, 506, 563
Bme18I GGWCC 1 cut(s) 655
BmeRI GACNNNNNGTC 1 cut(s) 538
BmgBI CACGTC 2 cut(s) 604, 852
BmgT120I GGNCC 1 cut(s) 655
BmiI GGNNCC 5 cut(s) 194, 305, 379, 668, 720
BmrFI CCNGG 4 cut(s) 153, 267, 506, 563
BmsI GCATC 1 cut(s) 306
BpiI GAAGAC 4 cut(s) 110, 537, 564, 832
BpmI CTGGAG 2 cut(s) 314, 584
Bpu14I TTCGAA 1 cut(s) 711
BpuMI CCSGG 2 cut(s) 153, 267
BsaHI GRCGYC 5 cut(s) 351, 366, 387, 719, 837
BsaJI CCNNGG 1 cut(s) 265
BsaWI WCCGGW 2 cut(s) 300, 621
BsaXI ACNNNNNCTCC 2 cut(s) 506, 536
Bsc4I CCNNNNNNNGG 2 cut(s) 151, 511
Bse118I RCCGGY 1 cut(s) 621
Bse21I CCTNAGG 1 cut(s) 659
BseBI CCWGG 2 cut(s) 506, 563
BseDI CCNNGG 1 cut(s) 265
BseGI GGATG 2 cut(s) 72, 652
BseLI CCNNNNNNNGG 2 cut(s) 151, 511
BseMII CTCAG 3 cut(s) 177, 650, 782
BseRI GAGGAG 2 cut(s) 317, 676
BseSI GKGCMC 1 cut(s) 380
BseX3I CGGCCG 1 cut(s) 825
BseXI GCAGC 3 cut(s) 138, 380, 742
BseYI CCCAGC 1 cut(s) 12
BsgI GTGCAG 1 cut(s) 671
Bsh1285I CGRYCG 2 cut(s) 436, 828
BshFI GGCC 4 cut(s) 173, 459, 737, 827
BshNI GGYRCC 4 cut(s) 192, 303, 377, 718
BshTI ACCGGT 1 cut(s) 621
BsiEI CGRYCG 2 cut(s) 436, 828
BsiHKAI GWGCWC 3 cut(s) 234, 261, 707
BsiSI CCGG 5 cut(s) 152, 267, 301, 622, 638
BslI CCNNNNNNNGG 2 cut(s) 151, 511
BsmAI GTCTC 1 cut(s) 779
BsnI GGCC 4 cut(s) 173, 459, 737, 827
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 4 cut(s) 234, 261, 380, 707
Bsp143I GATC 3 cut(s) 288, 337, 405
BspANI GGCC 4 cut(s) 173, 459, 737, 827
BspCNI CTCAG 3 cut(s) 178, 651, 783
BspLI GGNNCC 5 cut(s) 194, 305, 379, 668, 720
BspMAI CTGCAG 1 cut(s) 288
BspQI GCTCTTC 2 cut(s) 12, 266
BspT104I TTCGAA 1 cut(s) 711
BspT107I GGYRCC 4 cut(s) 192, 303, 377, 718
BsrBI CCGCTC 1 cut(s) 238
BsrFI RCCGGY 1 cut(s) 621
BssAI RCCGGY 1 cut(s) 621
BssECI CCNNGG 1 cut(s) 265
BssMI GATC 3 cut(s) 288, 337, 405
BssNI GRCGYC 5 cut(s) 351, 366, 387, 719, 837
BssSI CACGAG 3 cut(s) 416, 425, 485
Bst2BI CACGAG 3 cut(s) 416, 425, 485
Bst2UI CCWGG 2 cut(s) 506, 563
Bst4CI ACNGT 2 cut(s) 308, 684
Bst6I CTCTTC 3 cut(s) 12, 266, 767
BstACI GRCGYC 5 cut(s) 351, 366, 387, 719, 837
BstAPI GCANNNNNTGC 1 cut(s) 739
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 1 cut(s) 735
BstDEI CTNAG 3 cut(s) 186, 659, 791
BstF5I GGATG 2 cut(s) 72, 652
BstH2I RGCGCY 2 cut(s) 424, 722
BstHHI GCGC 4 cut(s) 272, 423, 492, 721
BstKTI GATC 3 cut(s) 291, 340, 408
BstMAI GTCTC 1 cut(s) 779
BstMBI GATC 3 cut(s) 288, 337, 405
BstMCI CGRYCG 2 cut(s) 436, 828
BstMWI GCNNNNNNNGC 5 cut(s) 256, 399, 727, 739, 824
BstNI CCWGG 2 cut(s) 506, 563
BstSCI CCNGG 4 cut(s) 151, 265, 504, 561
BstSFI CTRYAG 2 cut(s) 284, 358
BstSLI GKGCMC 1 cut(s) 380
BstV1I GCAGC 3 cut(s) 138, 380, 742
BstV2I GAAGAC 4 cut(s) 110, 537, 564, 832
BstX2I RGATCY 1 cut(s) 288
BstYI RGATCY 1 cut(s) 288
BstZI CGGCCG 1 cut(s) 825
Bsu36I CCTNAGG 1 cut(s) 659
BsuRI GGCC 4 cut(s) 173, 459, 737, 827
BtgZI GCGATG 1 cut(s) 567
BtrI CACGTC 2 cut(s) 604, 852
BtsCI GGATG 2 cut(s) 72, 652
Cac8I GCNNGC 1 cut(s) 735
CaiI CAGNNNCTG 1 cut(s) 658
CfoI GCGC 4 cut(s) 272, 423, 492, 721
Cfr10I RCCGGY 1 cut(s) 621
Cfr13I GGNCC 1 cut(s) 655
CseI GACGC 3 cut(s) 340, 374, 385
CsiI ACCWGGT 1 cut(s) 504
Csp6I GTAC 2 cut(s) 304, 592
CspAI ACCGGT 1 cut(s) 621
CviAII CATG 1 cut(s) 595
CviQI GTAC 2 cut(s) 304, 592
DdeI CTNAG 3 cut(s) 186, 659, 791
DinI GGCGCC 1 cut(s) 720
DpnI GATC 3 cut(s) 290, 339, 407
DpnII GATC 3 cut(s) 288, 337, 405
DrdI GACNNNNNNGTC 1 cut(s) 224
DriI GACNNNNNGTC 1 cut(s) 538
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 1 cut(s) 825
EagI CGGCCG 1 cut(s) 825
Eam1104I CTCTTC 3 cut(s) 12, 266, 767
Eam1105I GACNNNNNGTC 1 cut(s) 538
EarI CTCTTC 3 cut(s) 12, 266, 767
EciI GGCGGA 1 cut(s) 527
Ecl136II GAGCTC 1 cut(s) 232
EclXI CGGCCG 1 cut(s) 825
Eco147I AGGCCT 1 cut(s) 737
Eco24I GRGCYC 1 cut(s) 234
Eco47I GGWCC 1 cut(s) 655
Eco52I CGGCCG 1 cut(s) 825
Eco53kI GAGCTC 1 cut(s) 232
Eco81I CCTNAGG 1 cut(s) 659
EcoICRI GAGCTC 1 cut(s) 232
EcoO109I RGGNCCY 1 cut(s) 655
EcoRII CCWGG 2 cut(s) 504, 561
EcoT38I GRGCYC 1 cut(s) 234
EgeI GGCGCC 1 cut(s) 720
EheI GGCGCC 1 cut(s) 720
FaeI CATG 1 cut(s) 598
FaiI YATR 3 cut(s) 48, 311, 596
FatI CATG 1 cut(s) 594
FauI CCCGC 1 cut(s) 243
FblI GTMKAC 1 cut(s) 848
Fnu4HI GCNGC 7 cut(s) 124, 127, 142, 394, 731, 762, 819
FokI GGATG 2 cut(s) 59, 659
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 7 cut(s) 124, 127, 142, 394, 731, 762, 819
FspAI RTGCGCAY 1 cut(s) 491
FspI TGCGCA 1 cut(s) 491
GlaI GCGC 4 cut(s) 271, 422, 491, 720
GluI GCNGC 7 cut(s) 124, 127, 142, 394, 731, 762, 819
GsaI CCCAGC 1 cut(s) 16
GsuI CTGGAG 2 cut(s) 314, 584
HaeII RGCGCY 2 cut(s) 424, 722
HaeIII GGCC 4 cut(s) 173, 459, 737, 827
HapII CCGG 5 cut(s) 152, 267, 301, 622, 638
HgaI GACGC 3 cut(s) 340, 374, 385
HhaI GCGC 4 cut(s) 272, 423, 492, 721
Hin1I GRCGYC 5 cut(s) 351, 366, 387, 719, 837
Hin1II CATG 1 cut(s) 598
Hin6I GCGC 4 cut(s) 270, 421, 490, 719
HinP1I GCGC 4 cut(s) 270, 421, 490, 719
HincII GTYRAC 1 cut(s) 849
HindII GTYRAC 1 cut(s) 849
HinfI GANTC 4 cut(s) 474, 587, 607, 787
HpaII CCGG 5 cut(s) 152, 267, 301, 622, 638
HphI GGTGA 2 cut(s) 469, 529
Hpy166II GTNNAC 2 cut(s) 430, 849
Hpy188I TCNGA 7 cut(s) 162, 187, 217, 385, 473, 678, 792
Hpy188III TCNNGA 2 cut(s) 331, 700
Hpy8I GTNNAC 2 cut(s) 430, 849
HpyAV CCTTC 5 cut(s) 190, 592, 637, 707, 775
HpyCH4III ACNGT 2 cut(s) 308, 684
HpyCH4IV ACGT 6 cut(s) 387, 466, 603, 707, 837, 851
HpyCH4V TGCA 4 cut(s) 286, 319, 453, 652
HpyF10VI GCNNNNNNNGC 5 cut(s) 256, 399, 727, 739, 824
HpyF3I CTNAG 3 cut(s) 186, 659, 791
HpySE526I ACGT 6 cut(s) 387, 466, 603, 707, 837, 851
Hsp92I GRCGYC 5 cut(s) 351, 366, 387, 719, 837
Hsp92II CATG 1 cut(s) 598
HspAI GCGC 4 cut(s) 270, 421, 490, 719
KasI GGCGCC 1 cut(s) 718
KpnI GGTACC 1 cut(s) 307
Kzo9I GATC 3 cut(s) 288, 337, 405
LguI GCTCTTC 2 cut(s) 12, 266
LmnI GCTCC 2 cut(s) 237, 702
Lsp1109I GCAGC 3 cut(s) 138, 380, 742
LweI GCATC 1 cut(s) 306
MabI ACCWGGT 1 cut(s) 504
MaeII ACGT 6 cut(s) 387, 466, 603, 707, 837, 851
MaeIII GTNAC 1 cut(s) 475
MalI GATC 3 cut(s) 290, 339, 407
MbiI CCGCTC 1 cut(s) 238
MboI GATC 3 cut(s) 288, 337, 405
MflI RGATCY 1 cut(s) 288
MhlI GDGCHC 4 cut(s) 234, 261, 380, 707
MluCI AATT 3 cut(s) 100, 746, 805
Mly113I GGCGCC 1 cut(s) 719
MlyI GAGTC 3 cut(s) 483, 596, 781
MmeI TCCRAC 2 cut(s) 408, 701
MseI TTAA 2 cut(s) 86, 804
MspI CCGG 5 cut(s) 152, 267, 301, 622, 638
MspR9I CCNGG 4 cut(s) 153, 267, 506, 563
MvaI CCWGG 2 cut(s) 506, 563
MwoI GCNNNNNNNGC 5 cut(s) 256, 399, 727, 739, 824
NarI GGCGCC 1 cut(s) 719
NciI CCSGG 2 cut(s) 153, 267
NdeII GATC 3 cut(s) 288, 337, 405
NlaIII CATG 1 cut(s) 598
NlaIV GGNNCC 5 cut(s) 194, 305, 379, 668, 720
NmeAIII GCCGAG 2 cut(s) 149, 747
NmuCI GTSAC 1 cut(s) 475
NsbI TGCGCA 1 cut(s) 491
NspV TTCGAA 1 cut(s) 711
PceI AGGCCT 1 cut(s) 737
PciSI GCTCTTC 2 cut(s) 12, 266
PcsI WCGNNNNNNNCGW 5 cut(s) 225, 393, 405, 414, 423
PfeI GAWTC 1 cut(s) 607
PflFI GACNNNGTC 1 cut(s) 221
PinAI ACCGGT 1 cut(s) 621
PkrI GCNGC 7 cut(s) 125, 128, 143, 395, 732, 763, 820
PleI GAGTC 3 cut(s) 482, 595, 781
PluTI GGCGCC 1 cut(s) 722
PpsI GAGTC 3 cut(s) 482, 595, 781
PpuMI RGGWCCY 1 cut(s) 655
Psp124BI GAGCTC 1 cut(s) 234
Psp1406I AACGTT 1 cut(s) 466
Psp5II RGGWCCY 1 cut(s) 655
Psp6I CCWGG 2 cut(s) 504, 561
PspFI CCCAGC 1 cut(s) 12
PspGI CCWGG 2 cut(s) 504, 561
PspN4I GGNNCC 5 cut(s) 194, 305, 379, 668, 720
PspPI GGNCC 1 cut(s) 655
PspPPI RGGWCCY 1 cut(s) 655
PstI CTGCAG 1 cut(s) 288
PstNI CAGNNNCTG 1 cut(s) 658
PsuI RGATCY 1 cut(s) 288
PsyI GACNNNGTC 1 cut(s) 221
RsaI GTAC 2 cut(s) 305, 593
RsaNI GTAC 2 cut(s) 304, 592
SacI GAGCTC 1 cut(s) 234
SalI GTCGAC 1 cut(s) 847
SapI GCTCTTC 2 cut(s) 12, 266
SaqAI TTAA 2 cut(s) 86, 804
SatI GCNGC 7 cut(s) 124, 127, 142, 394, 731, 762, 819
Sau3AI GATC 3 cut(s) 288, 337, 405
Sau96I GGNCC 1 cut(s) 655
SchI GAGTC 3 cut(s) 483, 596, 781
ScrFI CCNGG 4 cut(s) 153, 267, 506, 563
SduI GDGCHC 4 cut(s) 234, 261, 380, 707
SexAI ACCWGGT 1 cut(s) 504
SfaNI GCATC 1 cut(s) 306
SfcI CTRYAG 2 cut(s) 284, 358
SfoI GGCGCC 1 cut(s) 720
SfuI TTCGAA 1 cut(s) 711
SgrDI CGTCGACG 1 cut(s) 847
SinI GGWCC 1 cut(s) 655
Sse9I AATT 3 cut(s) 100, 746, 805
SseBI AGGCCT 1 cut(s) 737
SspDI GGCGCC 1 cut(s) 718
SstI GAGCTC 1 cut(s) 234
StuI AGGCCT 1 cut(s) 737
StyD4I CCNGG 4 cut(s) 151, 265, 504, 561
TaaI ACNGT 2 cut(s) 308, 684
TaiI ACGT 6 cut(s) 390, 469, 606, 710, 840, 854
TaqI TCGA 7 cut(s) 228, 294, 528, 542, 617, 711, 848
TaqII GACCGA 1 cut(s) 350
TasI AATT 3 cut(s) 100, 746, 805
TauI GCSGC 4 cut(s) 126, 144, 764, 821
TfiI GAWTC 1 cut(s) 607
Tru1I TTAA 2 cut(s) 86, 804
Tru9I TTAA 2 cut(s) 86, 804
TseFI GTSAC 1 cut(s) 475
TseI GCWGC 3 cut(s) 126, 393, 730
Tsp45I GTSAC 1 cut(s) 475
TspDTI ATGAA 2 cut(s) 570, 611
Tth111I GACNNNGTC 1 cut(s) 221
VpaK11BI GGWCC 1 cut(s) 655
XcmI CCANNNNNNNNNTGG 1 cut(s) 502
XmiI GTMKAC 1 cut(s) 848
ZraI GACGTC 2 cut(s) 388, 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.