Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000407.1

Orthogroup ID

OG0008497

Physical Location & Seq

Genomic Coordinates Reverse (-)

15583 .. 24500

Gene Structure 8918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000407.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

atgaaagttaaggcaaagcttgtcactagctattgtcataacttcatggcttctcttgctacccttatgaagccatggtgtagagatggtggcctacataccggagatatgtgtgcctcctccttgtgcaagccaatatgtgaagaatgggggatgaagaagagaagaagaggtgtcctggcgctaggataccactacatgattgtaattttagcaggcataccgattggtcccgaaaccgatcaattcggtacagttcggcgtcaatcagtttcaacagtcgcagatggagatgaagagctgtttttcgctttgcttctagagttggatctgaccacgcgcaggacaccaccaccccgccgtctctgtcaacccatacccatggctcaccacgaatcccagcaactcaatccgagacagaaccgccacgggaactgccgtcatgatctggttccagctcggtttcatcaattcagtatgcttttcatccataccggtgccgacccgtttgcagaagtttcgccactgaaacctagaggagtactctatgacggacctcagctctcaaaacccgaaatttcactgagaaaggaggaaaacccccagaacaagaatggtgctgaagaaagaaagcgggttattaaaacagtatgctcaatacatgctcctcgtccgaggctgcgatttacgtgggactccagtattaaaaaggccccgaagaagaagtcaagaacaccatcagctccgaaatctaggtcaagctcaccggtttctgggagaaagctcaagcatgccgaggaacctataattgcttctgctgaagtaaggaacgctgctctcgaatccgatcatgccgaggaacctataattgcttctgctgaagtagggaacgctgctctcgaatccgatgttgagaaaagcagtaataaggaaccaactgcaccggaggtgaagacaacatcacctctacctccaaaaacgaagtcagcggcaccatcaactccaaaaatcaattcaacaccacctatgtctgggagaaaacgtggaaacgcaatagtcagggaggaaccaagagatgcttctattgaagcaaggagtattgctcgtgaagctgcgagagctcatcaaatgagtttagcttctggaactccgtcggtcgtcatatcaatgaaccttccgagaagattttgtgatggtaatctcccggaaactaaatcgcaactgacgttagaggatgaggaaggcaacgaattcacggttgtctttattccggagcgatatgggctgagtggagggtgggtgagctttgcgcgggaaaaaaagttgcacgacggcgacgccgtagtgcttgaacaaattgaaaaaactagactcaaaaaccttccgagaagattttgtgatggtaatctcccggaaactaaatcgcaactgacgttagaggatgaggaaggcaacgaattcacggttgtctttattccggagcgatatgggctgagtggagggtgggtgagctttgcgcgggaaaaaaagttgcacgacggcgacgccgtagtgcttgaacaaattgaaaaaactagactcaaagttcttcagaatctcaattcaccaatggctctccctcagctcattccatccccttcttcttcttcttcctccctccaccataaaccctccttcaatcccaatccactcccctatcccctatccccaaaccctaatttcttctctccccgcctccgccgccagcgacgccgctcttcctccctcacatgctccgcctcctccttctccgagcgccaccacaccaactccaagtccgacgacgtcgtcgagctcccgctctttcccttgccgctcgtcctcttccccggcgcgattctgccgctgcagatcttcgagttccggtaccggatgatgatgcactcgctcctccagaccgatctccgcttcggcgtcatctacagcgacgccgtctccggcactgccgacgtcggctgcgtcggcgaggtcgtcaagcacgagcggctcgtcgacgaccgcttcttcctgatttgtaaaggtcaggagcgttttagggttacggacctggtccggaccaagccctacctggtggcggaggtcaagtggctggaggaccggccgtccggcgacggcgaggaggacctggacacattggccaccgaggttgagtcctacatgaaggacgtgattcggctctccaaccggctcggcggcaagccggagaaggaggtgcaggacctgaggcggaacctatttccgacgccgttctcgttcttcgtcggaagcactttcgaaggcgcgccaagggagcagcaggccttgctggagttggaggacacggcggcgaggctgaagagggagaaggagacgctgaggaacacgctcaattacttgacggcggcgtccgccgttaaagacgtctttccgtcgtcgtcgtcttcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg

Protein Analysis

821

Amino Acids

91.8

Weight (kDa)

8.99

Isoelectric Point (pI)

54.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19740 AT1G75460
fragaria_vesca	FvH4_2g39180
malus_domestica	MD08G1023400.v1.1 MD15G1020800.v1.1
prunus_persica	Prupe.1G372600_v2.0.a1
pyrus_communis	pycom05g12090 pycom05g12660 pycom08g01820 pycom15g01710
rosa_chinensis	RchiOBHm_Chr5g0055761 RchiOBHm_Chr6g0301881
rosa_laevigata	RLG00000011213
rosa_multiflora	Rmu_sc0000407.1_g000004
rosa_roxburghii	Rroxscaffold_1G00024570 Rroxscaffold_3G00237460 Rroxscaffold_7G00166310
rosa_rugosa	Rorug06G0310500
rosa_samantha	Rh6AG422500 Rh6BG429300 Rh6CG435800 Rh6DG422800
rosa_wichuraiana	Rw6G036600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1826, 2422
AatII	GACGTC	3 cut(s)	1827, 1992, 2442
Acc65I	GGTACC	1 cut(s)	1905
AccB1I	GGYRCC	3 cut(s)	497, 991, 1905
AccBSI	CCGCTC	4 cut(s)	1755, 1840, 1855, 2023
AccI	GTMKAC	1 cut(s)	2031
AccII	CGCG	5 cut(s)	340, 1312, 1519, 1874, 2321
AccIII	TCCGGA	3 cut(s)	1270, 1477, 2091
AclWI	GGATC	1 cut(s)	336
AcoI	YGGCCR	2 cut(s)	2138, 2175
AcsI	RAATTY	3 cut(s)	576, 1250, 1457
AcuI	CTGAAG	5 cut(s)	642, 840, 900, 1574, 2393
AfaI	GTAC	3 cut(s)	253, 543, 1907
AfiI	CCNNNNNNNGG	4 cut(s)	342, 773, 1031, 2113
AgeI	ACCGGT	2 cut(s)	494, 766
AgsI	TTSAA	8 cut(s)	276, 1017, 1088, 1352, 1361, 1559, 1568, 1678
AhdI	GACNNNNNGTC	1 cut(s)	2140
AjiI	CACGTC	1 cut(s)	2206
AjnI	CCWGG	4 cut(s)	177, 2085, 2106, 2163
AjuI	GAANNNNNNNTTGG	4 cut(s)	997, 1029, 1063, 1095
Alw21I	GWGCWC	2 cut(s)	1123, 1836
Alw26I	GTCTC	4 cut(s)	368, 409, 1978, 2381
AlwI	GGATC	1 cut(s)	336
AlwNI	CAGNNNCTG	1 cut(s)	2260
Aor13HI	TCCGGA	3 cut(s)	1270, 1477, 2091
AoxI	GGCC	5 cut(s)	91, 711, 2138, 2175, 2337
ApeKI	GCWGC	7 cut(s)	679, 833, 893, 1112, 1885, 1995, 2332
ApoI	RAATTY	3 cut(s)	576, 1250, 1457
ArsI	GACNNNNNNTTYG	6 cut(s)	710, 740, 742, 772, 968, 1000
AscI	GGCGCGCC	1 cut(s)	2319
AsiGI	ACCGGT	2 cut(s)	494, 766
Asp718I	GGTACC	1 cut(s)	1905
AspLEI	GCGC	8 cut(s)	184, 342, 1312, 1519, 1797, 1874, 2321, 2323
AspS9I	GGNCC	9 cut(s)	230, 554, 712, 2083, 2089, 2094, 2134, 2161, 2257
AsuC2I	CCSGG	3 cut(s)	1205, 1412, 1869
AsuHPI	GGTGA	7 cut(s)	380, 756, 954, 961, 1312, 1519, 1596
AsuII	TTCGAA	1 cut(s)	2313
AvaII	GGWCC	8 cut(s)	230, 554, 2083, 2089, 2094, 2134, 2161, 2257
AxyI	CCTNAGG	1 cut(s)	2261
BalI	TGGCCA	1 cut(s)	2177
BanI	GGYRCC	3 cut(s)	497, 991, 1905
BanII	GRGCYC	2 cut(s)	1123, 1836
BauI	CACGAG	2 cut(s)	1104, 2018
BbsI	GAAGAC	2 cut(s)	959, 2451
Bbv12I	GWGCWC	2 cut(s)	1123, 1836
BbvCI	CCTCAGC	3 cut(s)	558, 1620, 2393
BbvI	GCAGC	7 cut(s)	666, 820, 880, 1099, 1872, 1982, 2344
BccI	CCATC	7 cut(s)	80, 281, 745, 1003, 1187, 1394, 1639
BcgI	CGANNNNNNTGC	4 cut(s)	491, 501, 525, 535
BciT130I	CCWGG	4 cut(s)	179, 2087, 2108, 2165
BciVI	GTATCC	1 cut(s)	182
BcnI	CCSGG	3 cut(s)	1205, 1412, 1869
BcoDI	GTCTC	4 cut(s)	368, 409, 1978, 2381
BfaI	CTAG	7 cut(s)	27, 185, 320, 534, 753, 1368, 1575
BfmI	CTRYAG	2 cut(s)	1886, 1960
BfoI	RGCGCY	2 cut(s)	185, 1798
BfuI	GTATCC	1 cut(s)	182
BglII	AGATCT	1 cut(s)	1890
BmcAI	AGTACT	1 cut(s)	543
Bme1390I	CCNGG	7 cut(s)	179, 1205, 1412, 1869, 2087, 2108, 2165
Bme18I	GGWCC	8 cut(s)	230, 554, 2083, 2089, 2094, 2134, 2161, 2257
BmeRI	GACNNNNNGTC	1 cut(s)	2140
BmgBI	CACGTC	1 cut(s)	2206
BmgT120I	GGNCC	9 cut(s)	230, 554, 712, 2083, 2089, 2094, 2134, 2161, 2257
BmrFI	CCNGG	7 cut(s)	179, 1205, 1412, 1869, 2087, 2108, 2165
BmsI	GCATC	2 cut(s)	1066, 1908
BpiI	GAAGAC	2 cut(s)	959, 2451
BplI	GAGNNNNNCTC	4 cut(s)	528, 560, 1087, 1119
BpmI	CTGGAG	4 cut(s)	682, 1916, 2150, 2366
Bpu10I	CCTNAGC	3 cut(s)	558, 1620, 2393
Bpu14I	TTCGAA	1 cut(s)	2313
BpuEI	CTTGAG	1 cut(s)	770
BpuMI	CCSGG	3 cut(s)	1205, 1412, 1869
BsaAI	YACGTR	1 cut(s)	690
BsaBI	GATNNNNATC	2 cut(s)	1197, 1404
BsaJI	CCNNGG	9 cut(s)	74, 381, 427, 674, 795, 855, 1867, 2181, 2324
BsaWI	WCCGGW	9 cut(s)	101, 494, 766, 943, 1270, 1477, 1902, 1908, 2091
Bsc4I	CCNNNNNNNGG	4 cut(s)	342, 773, 1031, 2113
Bse118I	RCCGGY	4 cut(s)	494, 766, 2136, 2223
Bse1I	ACTGG	1 cut(s)	699
Bse21I	CCTNAGG	1 cut(s)	2261
Bse8I	GATNNNNATC	2 cut(s)	1197, 1404
BseAI	TCCGGA	3 cut(s)	1270, 1477, 2091
BseBI	CCWGG	4 cut(s)	179, 2087, 2108, 2165
BseDI	CCNNGG	9 cut(s)	74, 381, 427, 674, 795, 855, 1867, 2181, 2324
BseGI	GGATG	6 cut(s)	159, 486, 1240, 1447, 1631, 1917
BseJI	GATNNNNATC	2 cut(s)	1197, 1404
BseLI	CCNNNNNNNGG	4 cut(s)	342, 773, 1031, 2113
BseMII	CTCAG	7 cut(s)	572, 575, 1277, 1484, 1634, 2252, 2384
BseNI	ACTGG	1 cut(s)	699
BsePI	GCGCGC	1 cut(s)	2319
BseRI	GAGGAG	6 cut(s)	109, 552, 657, 1771, 1919, 2171
BseX3I	CGGCCG	1 cut(s)	2138
BseXI	GCAGC	7 cut(s)	666, 820, 880, 1099, 1872, 1982, 2344
BseYI	CCCAGC	1 cut(s)	399
BsgI	GTGCAG	2 cut(s)	924, 2273
Bsh1236I	CGCG	5 cut(s)	340, 1312, 1519, 1874, 2321
Bsh1285I	CGRYCG	3 cut(s)	1158, 2038, 2141
BshFI	GGCC	5 cut(s)	93, 713, 2140, 2177, 2339
BshNI	GGYRCC	3 cut(s)	497, 991, 1905
BshTI	ACCGGT	2 cut(s)	494, 766
BsiEI	CGRYCG	3 cut(s)	1158, 2038, 2141
BsiHKAI	GWGCWC	2 cut(s)	1123, 1836
BslFI	GGGAC	2 cut(s)	216, 707
BslI	CCNNNNNNNGG	4 cut(s)	342, 773, 1031, 2113
BsmAI	GTCTC	4 cut(s)	368, 409, 1978, 2381
BsmBI	CGTCTC	3 cut(s)	368, 1978, 2381
BsmFI	GGGAC	2 cut(s)	216, 707
BsnI	GGCC	5 cut(s)	93, 713, 2140, 2177, 2339
Bsp119I	TTCGAA	1 cut(s)	2313
Bsp1286I	GDGCHC	2 cut(s)	1123, 1836
Bsp13I	TCCGGA	3 cut(s)	1270, 1477, 2091
Bsp143I	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
Bsp19I	CCATGG	2 cut(s)	74, 381
BspANI	GGCC	5 cut(s)	93, 713, 2140, 2177, 2339
BspCNI	CTCAG	7 cut(s)	571, 576, 1278, 1485, 1633, 2253, 2385
BspEI	TCCGGA	3 cut(s)	1270, 1477, 2091
BspFNI	CGCG	5 cut(s)	340, 1312, 1519, 1874, 2321
BspHI	TCATGA	1 cut(s)	442
BspMAI	CTGCAG	1 cut(s)	1890
BspPI	GGATC	1 cut(s)	336
BspQI	GCTCTTC	2 cut(s)	291, 1762
BspT104I	TTCGAA	1 cut(s)	2313
BspT107I	GGYRCC	3 cut(s)	497, 991, 1905
BsrBI	CCGCTC	4 cut(s)	1755, 1840, 1855, 2023
BsrFI	RCCGGY	4 cut(s)	494, 766, 2136, 2223
BsrI	ACTGG	1 cut(s)	699
BssAI	RCCGGY	4 cut(s)	494, 766, 2136, 2223
BssECI	CCNNGG	9 cut(s)	74, 381, 427, 674, 795, 855, 1867, 2181, 2324
BssHII	GCGCGC	1 cut(s)	2319
BssMI	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
BssSI	CACGAG	2 cut(s)	1104, 2018
BssT1I	CCWWGG	3 cut(s)	74, 381, 2324
Bst2BI	CACGAG	2 cut(s)	1104, 2018
Bst2UI	CCWGG	4 cut(s)	179, 2087, 2108, 2165
Bst4CI	ACNGT	5 cut(s)	256, 280, 649, 1258, 1465
Bst6I	CTCTTC	6 cut(s)	155, 163, 291, 1762, 1868, 2369
BstAPI	GCANNNNNTGC	1 cut(s)	2341
BstBAI	YACGTR	1 cut(s)	690
BstBI	TTCGAA	1 cut(s)	2313
BstC8I	GCNNGC	7 cut(s)	131, 217, 792, 1745, 2237, 2321, 2337
BstDEI	CTNAG	7 cut(s)	558, 584, 1286, 1493, 1620, 2261, 2393
BstDSI	CCRYGG	3 cut(s)	74, 381, 427
BstF5I	GGATG	6 cut(s)	159, 486, 1240, 1447, 1631, 1917
BstFNI	CGCG	5 cut(s)	340, 1312, 1519, 1874, 2321
BstH2I	RGCGCY	2 cut(s)	185, 1798
BstHHI	GCGC	8 cut(s)	184, 342, 1312, 1519, 1797, 1874, 2321, 2323
BstKTI	GATC	6 cut(s)	244, 331, 448, 850, 1893, 1942
BstMAI	GTCTC	4 cut(s)	368, 409, 1978, 2381
BstMBI	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
BstMCI	CGRYCG	3 cut(s)	1158, 2038, 2141
BstNI	CCWGG	4 cut(s)	179, 2087, 2108, 2165
BstNSI	RCATGY	3 cut(s)	665, 794, 1773
BstSCI	CCNGG	7 cut(s)	177, 1203, 1410, 1867, 2085, 2106, 2163
BstSFI	CTRYAG	2 cut(s)	1886, 1960
BstUI	CGCG	5 cut(s)	340, 1312, 1519, 1874, 2321
BstV1I	GCAGC	7 cut(s)	666, 820, 880, 1099, 1872, 1982, 2344
BstV2I	GAAGAC	2 cut(s)	959, 2451
BstX2I	RGATCY	2 cut(s)	328, 1890
BstXI	CCANNNNNNTGG	1 cut(s)	382
BstYI	RGATCY	2 cut(s)	328, 1890
BstZI	CGGCCG	1 cut(s)	2138
Bsu36I	CCTNAGG	1 cut(s)	2261
BsuI	GTATCC	1 cut(s)	182
BsuRI	GGCC	5 cut(s)	93, 713, 2140, 2177, 2339
BtgI	CCRYGG	3 cut(s)	74, 381, 427
BtrI	CACGTC	1 cut(s)	2206
BtsCI	GGATG	6 cut(s)	159, 486, 1240, 1447, 1631, 1917
BtsI	GCAGTG	1 cut(s)	1980
BtsIMutI	CAGTG	3 cut(s)	524, 581, 1980
Cac8I	GCNNGC	7 cut(s)	131, 217, 792, 1745, 2237, 2321, 2337
CaiI	CAGNNNCTG	1 cut(s)	2260
CciI	TCATGA	1 cut(s)	442
CfoI	GCGC	8 cut(s)	184, 342, 1312, 1519, 1797, 1874, 2321, 2323
Cfr10I	RCCGGY	4 cut(s)	494, 766, 2136, 2223
Cfr13I	GGNCC	9 cut(s)	230, 554, 712, 2083, 2089, 2094, 2134, 2161, 2257
CsiI	ACCWGGT	2 cut(s)	2085, 2106
Csp6I	GTAC	3 cut(s)	252, 542, 1906
CspAI	ACCGGT	2 cut(s)	494, 766
CspCI	CAANNNNNGTGG	2 cut(s)	2167, 2202
CviQI	GTAC	3 cut(s)	252, 542, 1906
DdeI	CTNAG	7 cut(s)	558, 584, 1286, 1493, 1620, 2261, 2393
DpnI	GATC	6 cut(s)	243, 330, 447, 849, 1892, 1941
DpnII	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
DrdI	GACNNNNNNGTC	2 cut(s)	1826, 2422
DriI	GACNNNNNGTC	1 cut(s)	2140
DseDI	GACNNNNNNGTC	2 cut(s)	1826, 2422
EaeI	YGGCCR	2 cut(s)	2138, 2175
EagI	CGGCCG	1 cut(s)	2138
Eam1104I	CTCTTC	6 cut(s)	155, 163, 291, 1762, 1868, 2369
Eam1105I	GACNNNNNGTC	1 cut(s)	2140
EarI	CTCTTC	6 cut(s)	155, 163, 291, 1762, 1868, 2369
EciI	GGCGGA	5 cut(s)	1727, 1765, 2129, 2281, 2416
Ecl136II	GAGCTC	2 cut(s)	1121, 1834
EclXI	CGGCCG	1 cut(s)	2138
Eco130I	CCWWGG	3 cut(s)	74, 381, 2324
Eco147I	AGGCCT	1 cut(s)	2339
Eco24I	GRGCYC	2 cut(s)	1123, 1836
Eco47I	GGWCC	8 cut(s)	230, 554, 2083, 2089, 2094, 2134, 2161, 2257
Eco52I	CGGCCG	1 cut(s)	2138
Eco53kI	GAGCTC	2 cut(s)	1121, 1834
Eco57I	CTGAAG	5 cut(s)	642, 840, 900, 1574, 2393
Eco81I	CCTNAGG	1 cut(s)	2261
EcoICRI	GAGCTC	2 cut(s)	1121, 1834
EcoO109I	RGGNCCY	3 cut(s)	712, 2161, 2257
EcoRI	GAATTC	2 cut(s)	1250, 1457
EcoRII	CCWGG	4 cut(s)	177, 2085, 2106, 2163
EcoT14I	CCWWGG	3 cut(s)	74, 381, 2324
EcoT38I	GRGCYC	2 cut(s)	1123, 1836
ErhI	CCWWGG	3 cut(s)	74, 381, 2324
Esp3I	CGTCTC	3 cut(s)	368, 1978, 2381
FalI	AAGNNNNNCTT	2 cut(s)	1063, 1095
FaqI	GGGAC	2 cut(s)	216, 707
FauI	CCCGC	6 cut(s)	365, 627, 1305, 1512, 1739, 1845
FblI	GTMKAC	1 cut(s)	2031
FokI	GGATG	6 cut(s)	166, 473, 1247, 1454, 1618, 1924
FriOI	GRGCYC	2 cut(s)	1123, 1836
FspBI	CTAG	7 cut(s)	27, 185, 320, 534, 753, 1368, 1575
GlaI	GCGC	8 cut(s)	183, 341, 1311, 1518, 1796, 1873, 2320, 2322
GsaI	CCCAGC	1 cut(s)	403
GsuI	CTGGAG	4 cut(s)	682, 1916, 2150, 2366
HaeII	RGCGCY	2 cut(s)	185, 1798
HaeIII	GGCC	5 cut(s)	93, 713, 2140, 2177, 2339
HhaI	GCGC	8 cut(s)	184, 342, 1312, 1519, 1797, 1874, 2321, 2323
Hin6I	GCGC	8 cut(s)	182, 340, 1310, 1517, 1795, 1872, 2319, 2321
HinP1I	GCGC	8 cut(s)	182, 340, 1310, 1517, 1795, 1872, 2319, 2321
HincII	GTYRAC	2 cut(s)	371, 2032
HindII	GTYRAC	2 cut(s)	371, 2032
HindIII	AAGCTT	1 cut(s)	17
HphI	GGTGA	7 cut(s)	380, 756, 954, 961, 1312, 1519, 1596
Hpy166II	GTNNAC	2 cut(s)	371, 2032
Hpy8I	GTNNAC	2 cut(s)	371, 2032
HpyCH4III	ACNGT	5 cut(s)	256, 280, 649, 1258, 1465
HpyCH4IV	ACGT	8 cut(s)	689, 1042, 1226, 1433, 1824, 1989, 2205, 2439
HpyCH4V	TGCA	8 cut(s)	129, 512, 941, 1327, 1534, 1888, 1921, 2254
HpyF3I	CTNAG	7 cut(s)	558, 584, 1286, 1493, 1620, 2261, 2393
HpySE526I	ACGT	8 cut(s)	689, 1042, 1226, 1433, 1824, 1989, 2205, 2439
HspAI	GCGC	8 cut(s)	182, 340, 1310, 1517, 1795, 1872, 2319, 2321
Kpn2I	TCCGGA	3 cut(s)	1270, 1477, 2091
KpnI	GGTACC	1 cut(s)	1909
Kzo9I	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
LguI	GCTCTTC	2 cut(s)	291, 1762
LmnI	GCTCC	9 cut(s)	670, 748, 1273, 1480, 1778, 1839, 1932, 2065, 2329
Lsp1109I	GCAGC	7 cut(s)	666, 820, 880, 1099, 1872, 1982, 2344
LweI	GCATC	2 cut(s)	1066, 1908
MabI	ACCWGGT	2 cut(s)	2085, 2106
MaeI	CTAG	7 cut(s)	27, 185, 320, 534, 753, 1368, 1575
MaeII	ACGT	8 cut(s)	689, 1042, 1226, 1433, 1824, 1989, 2205, 2439
MaeIII	GTNAC	2 cut(s)	22, 2077
MalI	GATC	6 cut(s)	243, 330, 447, 849, 1892, 1941
MbiI	CCGCTC	4 cut(s)	1755, 1840, 1855, 2023
MboI	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
MflI	RGATCY	2 cut(s)	328, 1890
MhlI	GDGCHC	2 cut(s)	1123, 1836
MlsI	TGGCCA	1 cut(s)	2177
MluNI	TGGCCA	1 cut(s)	2177
MlyI	GAGTC	4 cut(s)	689, 1365, 1572, 2198
MmeI	TCCRAC	6 cut(s)	306, 1842, 2244, 2281, 2303, 2331
Mox20I	TGGCCA	1 cut(s)	2177
MroI	TCCGGA	3 cut(s)	1270, 1477, 2091
MscI	TGGCCA	1 cut(s)	2177
MseI	TTAA	4 cut(s)	9, 642, 705, 2433
MslI	CAYNNNNRTG	3 cut(s)	380, 495, 1166
Msp20I	TGGCCA	1 cut(s)	2177
MspA1I	CMGCKG	2 cut(s)	989, 1885
MspR9I	CCNGG	7 cut(s)	179, 1205, 1412, 1869, 2087, 2108, 2165
MvaI	CCWGG	4 cut(s)	179, 2087, 2108, 2165
MvnI	CGCG	5 cut(s)	340, 1312, 1519, 1874, 2321
NciI	CCSGG	3 cut(s)	1205, 1412, 1869
NcoI	CCATGG	2 cut(s)	74, 381
NdeII	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
NmeAIII	GCCGAG	3 cut(s)	820, 880, 2208
NmuCI	GTSAC	1 cut(s)	22
NspI	RCATGY	3 cut(s)	665, 794, 1773
NspV	TTCGAA	1 cut(s)	2313
PaeI	GCATGC	1 cut(s)	794
PagI	TCATGA	1 cut(s)	442
PalAI	GGCGCGCC	1 cut(s)	2319
PauI	GCGCGC	1 cut(s)	2319
PceI	AGGCCT	1 cut(s)	2339
PciSI	GCTCTTC	2 cut(s)	291, 1762
PfeI	GAWTC	6 cut(s)	395, 842, 902, 1594, 1876, 2209
PflFI	GACNNNGTC	4 cut(s)	1823, 1826, 1970, 2087
PfoI	TCCNGGA	2 cut(s)	1203, 1410
PinAI	ACCGGT	2 cut(s)	494, 766
PleI	GAGTC	4 cut(s)	689, 1365, 1572, 2197
PpsI	GAGTC	4 cut(s)	689, 1365, 1572, 2197
Ppu21I	YACGTR	1 cut(s)	690
PpuMI	RGGWCCY	2 cut(s)	2161, 2257
Psp124BI	GAGCTC	2 cut(s)	1123, 1836
Psp5II	RGGWCCY	2 cut(s)	2161, 2257
Psp6I	CCWGG	4 cut(s)	177, 2085, 2106, 2163
PspFI	CCCAGC	1 cut(s)	399
PspGI	CCWGG	4 cut(s)	177, 2085, 2106, 2163
PspPI	GGNCC	9 cut(s)	230, 554, 712, 2083, 2089, 2094, 2134, 2161, 2257
PspPPI	RGGWCCY	2 cut(s)	2161, 2257
PstI	CTGCAG	1 cut(s)	1890
PstNI	CAGNNNCTG	1 cut(s)	2260
PsuI	RGATCY	2 cut(s)	328, 1890
PsyI	GACNNNGTC	4 cut(s)	1823, 1826, 1970, 2087
PteI	GCGCGC	1 cut(s)	2319
RsaI	GTAC	3 cut(s)	253, 543, 1907
RsaNI	GTAC	3 cut(s)	252, 542, 1906
RseI	CAYNNNNRTG	3 cut(s)	380, 495, 1166
SacI	GAGCTC	2 cut(s)	1123, 1836
SalI	GTCGAC	1 cut(s)	2030
SapI	GCTCTTC	2 cut(s)	291, 1762
SaqAI	TTAA	4 cut(s)	9, 642, 705, 2433
Sau3AI	GATC	6 cut(s)	241, 328, 445, 847, 1890, 1939
Sau96I	GGNCC	9 cut(s)	230, 554, 712, 2083, 2089, 2094, 2134, 2161, 2257
ScaI	AGTACT	1 cut(s)	543
SchI	GAGTC	4 cut(s)	689, 1365, 1572, 2198
ScrFI	CCNGG	7 cut(s)	179, 1205, 1412, 1869, 2087, 2108, 2165
SduI	GDGCHC	2 cut(s)	1123, 1836
SexAI	ACCWGGT	2 cut(s)	2085, 2106
SfaNI	GCATC	2 cut(s)	1066, 1908
SfcI	CTRYAG	2 cut(s)	1886, 1960
SfuI	TTCGAA	1 cut(s)	2313
SgrDI	CGTCGACG	1 cut(s)	2030
SgsI	GGCGCGCC	1 cut(s)	2319
SinI	GGWCC	8 cut(s)	230, 554, 2083, 2089, 2094, 2134, 2161, 2257
SmiMI	CAYNNNNRTG	3 cut(s)	380, 495, 1166
SmlI	CTYRAG	1 cut(s)	785
SmoI	CTYRAG	1 cut(s)	785
SphI	GCATGC	1 cut(s)	794
SseBI	AGGCCT	1 cut(s)	2339
SspMI	CTAG	7 cut(s)	27, 185, 320, 534, 753, 1368, 1575
SstI	GAGCTC	2 cut(s)	1123, 1836
StuI	AGGCCT	1 cut(s)	2339
StyD4I	CCNGG	7 cut(s)	177, 1203, 1410, 1867, 2085, 2106, 2163
StyI	CCWWGG	3 cut(s)	74, 381, 2324
TaaI	ACNGT	5 cut(s)	256, 280, 649, 1258, 1465
TaiI	ACGT	8 cut(s)	692, 1045, 1229, 1436, 1827, 1992, 2208, 2442
TaqI	TCGA	6 cut(s)	840, 900, 1830, 1896, 2031, 2313
TaqII	GACCGA	2 cut(s)	1144, 1952
TatI	WGTACW	1 cut(s)	541
TauI	GCSGC	9 cut(s)	992, 1743, 1755, 1855, 1885, 2026, 2235, 2366, 2423
TfiI	GAWTC	6 cut(s)	395, 842, 902, 1594, 1876, 2209
Tru1I	TTAA	4 cut(s)	9, 642, 705, 2433
Tru9I	TTAA	4 cut(s)	9, 642, 705, 2433
TscAI	CASTG	3 cut(s)	531, 588, 1987
TseFI	GTSAC	1 cut(s)	22
TseI	GCWGC	7 cut(s)	679, 833, 893, 1112, 1885, 1995, 2332
Tsp45I	GTSAC	1 cut(s)	22
TspDTI	ATGAA	9 cut(s)	17, 34, 83, 170, 309, 455, 475, 1184, 2213
TspGWI	ACGGA	4 cut(s)	567, 1140, 2096, 2436
TspRI	CASTG	3 cut(s)	531, 588, 1987
Tth111I	GACNNNGTC	4 cut(s)	1823, 1826, 1970, 2087
VpaK11BI	GGWCC	8 cut(s)	230, 554, 2083, 2089, 2094, 2134, 2161, 2257
XapI	RAATTY	3 cut(s)	576, 1250, 1457
XbaI	TCTAGA	1 cut(s)	319
XceI	RCATGY	3 cut(s)	665, 794, 1773
XcmI	CCANNNNNNNNNTGG	2 cut(s)	611, 2104
XmiI	GTMKAC	1 cut(s)	2031
XspI	CTAG	7 cut(s)	27, 185, 320, 534, 753, 1368, 1575
ZraI	GACGTC	3 cut(s)	1825, 1990, 2440
ZrmI	AGTACT	1 cut(s)	543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.