Prupe.1G394600_v2.0.a1

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35070239 .. 35074469
4231 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G394600.2

Sequence Viewer

Length: 3342 bp
ATGGCATTGTTGATAGTATGCTCAGCAAGCATGTGCTGTAGTAGTCTCAATTACAGTCTTGCTTTTACTGACAATAGGATATTTGCAATAAGCCATATTGGTTCGTTAAAAGAAAGAAACTGCGGAAAGTTAAAGGCTTGGCCATGTGGGTCTTTGGTGAACTTGACAAAAAAGAGGAAAAAACGGATGGGTTTTTGTGGGTTTGTGATAAAAAGGTCACAGGAGGTAGTGGTGGCGAAGAAAAAGCCAAAAATTTCAGTGTCTTCTGAGGAAGTTGTGAGGGTTCTGAAGTCGATTGCAGACCCAAAATCTGCTTTTTCATTCTTTAAGTCCTTTGCTGAGTTGCCTAGTGTTGTTCACACCACTGAAACTTGCAATTACATGCTTGAAATCTTGAGGGTTCATAGGAGGGTGGAGGATATGGCTTATGTGTTTGATGTAATGCAAAAACAGATCATAAAGAGGAATTTGGACACTTACCTTACTATCTTTAAGGGTCTTGATATAAGAGGTGGAATTCGACAAGCGCCATCTGCTCTTGAAGAGATGCGAAAATCTGGGTTTATCTTGAATGCGTATTCATACAATGGGTTGATATATAATCTTATTCAGTCTGGCTATTGTAGGGAGGCTTTGGAGGTTTATGAAAGAGTGGTGTCAGAAGGGATTAAGCCTAGCCTGAAGACTTACTCAGCACTTATGGTGTCATTGGGAAAGAGAAGGGATGTTAAAACTGTTATGGGCTTGCTAAAGGAGATGGAAAGTTTAGGACTGAGACCTAATGTTTATACTTTTACTATATGCATTAGAGCACTTGGGAGGGCTGGGAAAATTGATGAGGCATATGAAATTTTCAAGAGAATGGATGAGGAGGGATGTGGCCCCGATGTTATCACTTATACTGTTCTCATTGATGCTCTTTGTACTGCAGGTAAACTTGATAATGCCAAGGAATTGTTTGCAAAAATGAAATCCAGTGGTCATAAACCTGACCGGGTAACCTACATTACTTTGCTGGACAAGTTTAGTGATGGGAAAGACTTGGACACAGTGAAAGAGTTTTGGCGTGAAATGGAAGCTGATGGTTATGCTCCTGATGTGGTTTCTTTCACCATACTTGTCAATGCTTTATGCAAAGCTGGAAATGTTGATGAAGCATTTAGTATGTTGGATATCATGAGGAAACAAGGGGTCTCGCCAAATCTTCATACTTACAACACATTACTTTGTGGACTTCTGCGGTTATGCAGGTTGGACGAGGCATTGAATCTTTTCAACAGCATGGAATGTCTGGGTGTTCCACCTACTGTTTACACATACATCCTTTTCATTGACTACTATGGAAAGTGTGGCAAATCTGGCAAAGCTATTGAGGCCTTTGAGAAGATGAAAGCTAGAGGCATTGTTCCAAATATTGTTGCTTGTAATGCATCTTTGTACAGTCTTGCTGAAGAGGGTAGACTTCAAGAAGCACAACATGTTTATAATGAGCTAAAATATAGTGGGCTTTCTCCAGATTCAGTAACTTACAACATGATGATGAAGTGCTATAGTAAGGTGGGGCAAATAGATGAAGCCATCAAGTTTCTTTCAGAGATGGAAAGAAATGGGTGCAAAGCAGACGTAATTATTGTTAACTCTTTGATTGACATTCTTTACAAGGCTGACCGAGTAGATGAAGCATGGCAAATGTTTTACAGAATGAAGGAAATGAAGCTCACTCCAACAGTTGTGACCTACAACACATTACTTGCTGCACTAGGGAAAGAGGGCCAAGTCCGAAAAGCCATTGAAATGTTTGGGTATATGACCGAACAAGGGTGTCCTCCAAACACAATAACTTTCAACACACTCTTGAACTGTCTATGCAAGAACGATGAGGTTAATTTGGCATTGAAAATGCTTTGCAAAATGACCACAATGAATTGCAGACCTGATGTTTTGACCTATAATACTATAATTTATGGCCTAATCAGAGAAAGCAGAATTGATTACGCATTCTGGTTCTTCCATCAGATGAAGAAATCACTATTTCCTGACCATATAACAGTGTGCACTCTCCTGCCTGGTGTAGTAAAGGACGGGCGCATTGAGGATGCTTTAAAAATTGCTGAGGACTTCATGTATCAGGTTGGGGTTAAAGCAGACAGGCCTTTTTGGGAAGATTTAATGGGAAGGATTTTGATTGAAGCTGAAATAGACATAGTCGTTTTATTTGCTGAAAGGTTGATCTCTGATAGGATTTGCTGGGATGACTCTCTACTGATTCCTCTACTTAGGTTTTTGTGTACGCGTAGGAAAGCTTTTGATGCTCACCATATATTTGAGAAATTTACTAAAACTCTCGGAATTAAGCCAACACTAGAAGCATATAACTGTTTGATTGAATGGCTTCTGAAAGACCATGTCACTGAAAGAGCTTGGGATCTATTTATGGAGATGAAAAATTCTGGTTGTGCCCCTGATGTATTCACCTACAACTTGTTACTTGATGCTCATGGGAAGTCTGGGAACATCACTGAACTCTTTGAATTGTACGAGGAGATGAATTGTAGGGGATGCAAACCTAACACCATAACCCACAATATAGTCATCTCCAGTCTTGTGAAATCTGACAGTATTGAGAGGGCTATAGATTTATATTATGATCTTGTAAGTGGTGATTTCTCTCCCTCTCCTTGTACATATGGCCCTCTCATAGATGGACTTTTCAAGTCGGGAAGACTAGAGGAAGCAATGCATTTCTTTGAGGAGATGGCAGACTATGGATGCAAGCCTAATTCTGCTATTTTTAATATTCTCATAAATGGTTTTGCGAAAACAGGTGATGTGGAAGCTGCTTGCGAGTTGTTTAAAAGGATGACTAGAGAAGGAATAAGACCAGACCTGAAGTCTTACACCATTCTTGTGGATTGCCTGTGCCAGGCAGGGAGAGTGGATGACGCTCTGCAATTTTTTGAGGAGATAAAACAAAGTGGCCTTGATCCTGACTCTGTTTCTTACAACCTTATGATAAATGGACTTGGAAGATCGCGGAGGGTAGAGGAAGCTCTCACTGTTTATGATGAAATGCGGACTAGAGGAATTGCTCCTGATCTTTTCACGTACAATTCATTAATATTCAATCTTGGACTTGTTGGAATGGTGGAGCAAGCAGCGAGGATTTATGAAGAACTACAGCTTGTAGGTCTTGAACCTGATGTGTTTACCTACAATGCTCTCATTCGACTGTATAGCACATCTGGAAATCCAGATCATGCTTATGCAGTTTACAAGAACATGATGGTCGGGGGCTGCTGCCCCAATGTAGGAACATTTGCACAGCTTCCCAATCAAACTTGA

Protein Analysis

1114

Amino Acids

125.94

Weight (kDa)

6.3

Isoelectric Point (pI)

35.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014408)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31850
fragaria_vesca FvH4_2g41180 FvH4_2g41180
malus_domestica MD08G1055800.v1.1
prunus_persica Prupe.1G394600_v2.0.a1 Prupe.1G394600_v2.0.a1
pyrus_communis pycom08g04580
rosa_chinensis RchiOBHm_Chr6g0299351
rosa_laevigata RLG00000011440
rosa_multiflora Rmu_ssc0000374.1_g000003
rosa_roxburghii Rroxscaffold_7G00168770
rosa_rugosa Rorug06G0287500
rosa_samantha Rh6AG399000 Rh6BG407400 Rh6CG413300 Rh6DG400200
rosa_wichuraiana Rw6G034930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1485
Acc36I ACCTGC 2 cut(s) 920, 1239
AccI GTMKAC 1 cut(s) 1459
AccII CGCG 2 cut(s) 2293, 3034
AciI CCGC 4 cut(s) 123, 1240, 3034, 3073
AclWI GGATC 2 cut(s) 2433, 2978
AcoI YGGCCR 1 cut(s) 140
AcsI RAATTY 6 cut(s) 252, 466, 516, 849, 2330, 2446
AcuI CTGAAG 4 cut(s) 308, 701, 1470, 2909
AfaI GTAC 6 cut(s) 925, 1439, 2290, 2537, 2683, 3107
AfiI CCNNNNNNNGG 3 cut(s) 1818, 2923, 3308
AflIII ACRYGT 2 cut(s) 1477, 2291
AhdI GACNNNNNGTC 1 cut(s) 2890
AjnI CCWGG 2 cut(s) 2065, 2922
Alw21I GWGCWC 2 cut(s) 814, 2057
Alw26I GTCTC 3 cut(s) 50, 769, 1198
Alw44I GTGCAC 1 cut(s) 2053
AlwI GGATC 2 cut(s) 2433, 2978
AoxI GGCC 8 cut(s) 140, 880, 1374, 1771, 1966, 2150, 2689, 2977
ApaLI GTGCAC 1 cut(s) 2053
ApeKI GCWGC 5 cut(s) 1754, 2837, 3155, 3294, 3297
ApoI RAATTY 6 cut(s) 252, 466, 516, 849, 2330, 2446
AseI ATTAAT 1 cut(s) 3116
Asp700I GAANNNNTTC 2 cut(s) 1271, 2391
AspLEI GCGC 2 cut(s) 529, 2088
AspS9I GGNCC 3 cut(s) 881, 1771, 2690
AsuC2I CCSGG 1 cut(s) 995
AsuHPI GGTGA 6 cut(s) 169, 1102, 2306, 2464, 2672, 2837
BaeGI GKGCMC 2 cut(s) 2057, 2461
BalI TGGCCA 1 cut(s) 142
BbsI GAAGAC 3 cut(s) 255, 689, 2728
Bbv12I GWGCWC 2 cut(s) 814, 2057
BbvCI CCTCAGC 1 cut(s) 2112
BbvI GCAGC 5 cut(s) 1741, 2824, 3167, 3281, 3284
BciT130I CCWGG 2 cut(s) 2067, 2924
BcnI CCSGG 1 cut(s) 995
BcoDI GTCTC 3 cut(s) 50, 769, 1198
BfaI CTAG 8 cut(s) 348, 675, 1395, 1760, 2363, 2726, 2865, 3078
BfmI CTRYAG 5 cut(s) 37, 927, 1549, 2631, 3176
BfoI RGCGCY 1 cut(s) 530
BfuAI ACCTGC 2 cut(s) 920, 1239
BisI GCNGC 5 cut(s) 1755, 2838, 3156, 3295, 3298
BlpI GCTNAGC 1 cut(s) 22
BlsI GCNGC 5 cut(s) 1756, 2839, 3157, 3296, 3299
Bme1390I CCNGG 3 cut(s) 995, 2067, 2924
BmeRI GACNNNNNGTC 1 cut(s) 2890
BmgT120I GGNCC 3 cut(s) 881, 1771, 2690
BmiI GGNNCC 1 cut(s) 883
BmrFI CCNGG 3 cut(s) 995, 2067, 2924
BmsI GCATC 8 cut(s) 537, 904, 1439, 2086, 2299, 2482, 2549, 2759
BpiI GAAGAC 3 cut(s) 255, 689, 2728
BpmI CTGGAG 2 cut(s) 1497, 2581
Bpu10I CCTNAGC 1 cut(s) 2112
Bpu1102I GCTNAGC 1 cut(s) 22
BpuEI CTTGAG 1 cut(s) 415
BpuMI CCSGG 1 cut(s) 995
BsaAI YACGTR 1 cut(s) 3105
BsaI GGTCTC 2 cut(s) 769, 1198
BsaJI CCNNGG 1 cut(s) 948
Bsc4I CCNNNNNNNGG 3 cut(s) 1818, 2923, 3308
Bse1I ACTGG 2 cut(s) 975, 2598
Bse3DI GCAATG 1 cut(s) 2742
BseBI CCWGG 2 cut(s) 2067, 2924
BseDI CCNNGG 1 cut(s) 948
BseLI CCNNNNNNNGG 3 cut(s) 1818, 2923, 3308
BseMI GCAATG 1 cut(s) 2742
BseMII CTCAG 6 cut(s) 36, 258, 330, 705, 764, 2103
BseNI ACTGG 2 cut(s) 975, 2598
BseRI GAGGAG 4 cut(s) 884, 2555, 2765, 2975
BseSI GKGCMC 2 cut(s) 2057, 2461
BseXI GCAGC 5 cut(s) 1741, 2824, 3167, 3281, 3284
BseYI CCCAGC 2 cut(s) 824, 2247
BsgI GTGCAG 1 cut(s) 1740
Bsh1236I CGCG 2 cut(s) 2293, 3034
BshFI GGCC 8 cut(s) 142, 882, 1376, 1773, 1968, 2152, 2691, 2979
BsiHKAI GWGCWC 2 cut(s) 814, 2057
BsiSI CCGG 1 cut(s) 994
BslI CCNNNNNNNGG 3 cut(s) 1818, 2923, 3308
BsmAI GTCTC 3 cut(s) 50, 769, 1198
BsmI GAATGC 2 cut(s) 577, 1997
BsnI GGCC 8 cut(s) 142, 882, 1376, 1773, 1968, 2152, 2691, 2979
Bso31I GGTCTC 2 cut(s) 769, 1198
Bsp1286I GDGCHC 3 cut(s) 814, 2057, 2461
Bsp1407I TGTACA 2 cut(s) 1437, 2681
Bsp143I GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
Bsp1720I GCTNAGC 1 cut(s) 22
BspACI CCGC 4 cut(s) 123, 1240, 3034, 3073
BspANI GGCC 8 cut(s) 142, 882, 1376, 1773, 1968, 2152, 2691, 2979
BspCNI CTCAG 6 cut(s) 35, 259, 331, 704, 765, 2104
BspFNI CGCG 2 cut(s) 2293, 3034
BspHI TCATGA 1 cut(s) 1176
BspLI GGNNCC 1 cut(s) 883
BspMAI CTGCAG 1 cut(s) 931
BspMI ACCTGC 2 cut(s) 920, 1239
BspPI GGATC 2 cut(s) 2433, 2978
BspTNI GGTCTC 2 cut(s) 769, 1198
BsrDI GCAATG 1 cut(s) 2742
BsrGI TGTACA 2 cut(s) 1437, 2681
BsrI ACTGG 2 cut(s) 975, 2598
BssECI CCNNGG 1 cut(s) 948
BssMI GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
BssT1I CCWWGG 1 cut(s) 948
Bst2UI CCWGG 2 cut(s) 2067, 2924
Bst6I CTCTTC 2 cut(s) 537, 1446
BstAUI TGTACA 2 cut(s) 1437, 2681
BstBAI YACGTR 1 cut(s) 3105
BstC8I GCNNGC 5 cut(s) 28, 746, 2774, 2842, 3153
BstDEI CTNAG 7 cut(s) 22, 267, 339, 691, 773, 2112, 2276
BstEII GGTNACC 1 cut(s) 997
BstENI CCTNNNNNAGG 1 cut(s) 2921
BstFNI CGCG 2 cut(s) 2293, 3034
BstH2I RGCGCY 1 cut(s) 530
BstHHI GCGC 2 cut(s) 529, 2088
BstKTI GATC 8 cut(s) 456, 2232, 2428, 2650, 2986, 3032, 3097, 3256
BstMAI GTCTC 3 cut(s) 50, 769, 1198
BstMBI GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
BstMWI GCNNNNNNNGC 6 cut(s) 27, 533, 1359, 1373, 1427, 2309
BstNI CCWGG 2 cut(s) 2067, 2924
BstNSI RCATGY 3 cut(s) 34, 385, 1481
BstPI GGTNACC 1 cut(s) 997
BstSCI CCNGG 3 cut(s) 993, 2065, 2922
BstSFI CTRYAG 5 cut(s) 37, 927, 1549, 2631, 3176
BstSLI GKGCMC 2 cut(s) 2057, 2461
BstUI CGCG 2 cut(s) 2293, 3034
BstV1I GCAGC 5 cut(s) 1741, 2824, 3167, 3281, 3284
BstV2I GAAGAC 3 cut(s) 255, 689, 2728
BstX2I RGATCY 1 cut(s) 2425
BstXI CCANNNNNNTGG 1 cut(s) 2908
BstYI RGATCY 1 cut(s) 2425
BsuRI GGCC 8 cut(s) 142, 882, 1376, 1773, 1968, 2152, 2691, 2979
BtsIMutI CAGTG 8 cut(s) 264, 363, 982, 1056, 2055, 2409, 2517, 3054
BveI ACCTGC 2 cut(s) 920, 1239
Cac8I GCNNGC 5 cut(s) 28, 746, 2774, 2842, 3153
CciI TCATGA 1 cut(s) 1176
CfoI GCGC 2 cut(s) 529, 2088
Cfr13I GGNCC 3 cut(s) 881, 1771, 2690
CseI GACGC 1 cut(s) 2951
Csp6I GTAC 6 cut(s) 924, 1438, 2289, 2536, 2682, 3106
CviQI GTAC 6 cut(s) 924, 1438, 2289, 2536, 2682, 3106
DdeI CTNAG 7 cut(s) 22, 267, 339, 691, 773, 2112, 2276
DpnI GATC 8 cut(s) 455, 2231, 2427, 2649, 2985, 3031, 3096, 3255
DpnII GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
DraI TTTAAA 2 cut(s) 2103, 2854
DriI GACNNNNNGTC 1 cut(s) 2890
EaeI YGGCCR 1 cut(s) 140
Eam1104I CTCTTC 2 cut(s) 537, 1446
Eam1105I GACNNNNNGTC 1 cut(s) 2890
EarI CTCTTC 2 cut(s) 537, 1446
Eco130I CCWWGG 1 cut(s) 948
Eco147I AGGCCT 2 cut(s) 1376, 2152
Eco31I GGTCTC 2 cut(s) 769, 1198
Eco32I GATATC 1 cut(s) 1174
Eco57I CTGAAG 4 cut(s) 308, 701, 1470, 2909
Eco91I GGTNACC 1 cut(s) 997
EcoNI CCTNNNNNAGG 1 cut(s) 2921
EcoO65I GGTNACC 1 cut(s) 997
EcoRI GAATTC 1 cut(s) 516
EcoRII CCWGG 2 cut(s) 2065, 2922
EcoRV GATATC 1 cut(s) 1174
EcoT14I CCWWGG 1 cut(s) 948
EcoT22I ATGCAT 3 cut(s) 806, 1432, 2742
ErhI CCWWGG 1 cut(s) 948
FauNDI CATATG 2 cut(s) 844, 2686
FblI GTMKAC 1 cut(s) 1459
Fnu4HI GCNGC 5 cut(s) 1755, 2838, 3156, 3295, 3298
Fsp4HI GCNGC 5 cut(s) 1755, 2838, 3156, 3295, 3298
FspBI CTAG 8 cut(s) 348, 675, 1395, 1760, 2363, 2726, 2865, 3078
GlaI GCGC 2 cut(s) 528, 2087
GluI GCNGC 5 cut(s) 1755, 2838, 3156, 3295, 3298
GsaI CCCAGC 2 cut(s) 828, 2251
GsuI CTGGAG 2 cut(s) 1497, 2581
HaeII RGCGCY 1 cut(s) 530
HaeIII GGCC 8 cut(s) 142, 882, 1376, 1773, 1968, 2152, 2691, 2979
HapII CCGG 1 cut(s) 994
HgaI GACGC 1 cut(s) 2951
HhaI GCGC 2 cut(s) 529, 2088
Hin6I GCGC 2 cut(s) 527, 2086
HinP1I GCGC 2 cut(s) 527, 2086
HincII GTYRAC 1 cut(s) 1636
HindII GTYRAC 1 cut(s) 1636
HindIII AAGCTT 1 cut(s) 2301
HinfI GANTC 5 cut(s) 1267, 1517, 2255, 2266, 2990
HpaI GTTAAC 1 cut(s) 1636
HpaII CCGG 1 cut(s) 994
HphI GGTGA 6 cut(s) 169, 1102, 2306, 2464, 2672, 2837
HpyAV CCTTC 5 cut(s) 656, 714, 1699, 2169, 2864
HpyCH4IV ACGT 2 cut(s) 1623, 3104
HpyF10VI GCNNNNNNNGC 6 cut(s) 27, 533, 1359, 1373, 1427, 2309
HpyF3I CTNAG 7 cut(s) 22, 267, 339, 691, 773, 2112, 2276
HpySE526I ACGT 2 cut(s) 1623, 3104
HspAI GCGC 2 cut(s) 527, 2086
KspAI GTTAAC 1 cut(s) 1636
Kzo9I GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
LmnI GCTCC 3 cut(s) 1096, 3094, 3148
Lsp1109I GCAGC 5 cut(s) 1741, 2824, 3167, 3281, 3284
LweI GCATC 8 cut(s) 537, 904, 1439, 2086, 2299, 2482, 2549, 2759
MaeI CTAG 8 cut(s) 348, 675, 1395, 1760, 2363, 2726, 2865, 3078
MaeII ACGT 2 cut(s) 1623, 3104
MaeIII GTNAC 6 cut(s) 216, 997, 1522, 1732, 2407, 2484
MalI GATC 8 cut(s) 455, 2231, 2427, 2649, 2985, 3031, 3096, 3255
MboI GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
MflI RGATCY 1 cut(s) 2425
MhlI GDGCHC 3 cut(s) 814, 2057, 2461
MlsI TGGCCA 1 cut(s) 142
MluI ACGCGT 1 cut(s) 2291
MluNI TGGCCA 1 cut(s) 142
MlyI GAGTC 2 cut(s) 2249, 2984
MmeI TCCRAC 4 cut(s) 1149, 1233, 1748, 3118
Mox20I TGGCCA 1 cut(s) 142
Mph1103I ATGCAT 3 cut(s) 806, 1432, 2742
MroXI GAANNNNTTC 2 cut(s) 1271, 2391
MscI TGGCCA 1 cut(s) 142
MslI CAYNNNNRTG 4 cut(s) 1538, 1793, 2906, 3261
Msp20I TGGCCA 1 cut(s) 142
MspI CCGG 1 cut(s) 994
MspR9I CCNGG 3 cut(s) 995, 2067, 2924
Mva1269I GAATGC 2 cut(s) 577, 1997
MvaI CCWGG 2 cut(s) 2067, 2924
MvnI CGCG 2 cut(s) 2293, 3034
MwoI GCNNNNNNNGC 6 cut(s) 27, 533, 1359, 1373, 1427, 2309
NciI CCSGG 1 cut(s) 995
NdeI CATATG 2 cut(s) 844, 2686
NdeII GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
NlaIV GGNNCC 1 cut(s) 883
NmuCI GTSAC 3 cut(s) 216, 1732, 2407
NsiI ATGCAT 3 cut(s) 806, 1432, 2742
NspI RCATGY 3 cut(s) 34, 385, 1481
PagI TCATGA 1 cut(s) 1176
PceI AGGCCT 2 cut(s) 1376, 2152
PciI ACATGT 1 cut(s) 1477
PctI GAATGC 2 cut(s) 577, 1997
PdmI GAANNNNTTC 2 cut(s) 1271, 2391
PfeI GAWTC 3 cut(s) 1267, 1517, 2266
PflFI GACNNNGTC 2 cut(s) 2204, 2405
PkrI GCNGC 5 cut(s) 1756, 2839, 3157, 3296, 3299
PleI GAGTC 2 cut(s) 2249, 2984
PpsI GAGTC 2 cut(s) 2249, 2984
Ppu21I YACGTR 1 cut(s) 3105
PscI ACATGT 1 cut(s) 1477
PshBI ATTAAT 1 cut(s) 3116
PsiI TTATAA 1 cut(s) 1485
Psp6I CCWGG 2 cut(s) 2065, 2922
PspEI GGTNACC 1 cut(s) 997
PspFI CCCAGC 2 cut(s) 824, 2247
PspGI CCWGG 2 cut(s) 2065, 2922
PspN4I GGNNCC 1 cut(s) 883
PspPI GGNCC 3 cut(s) 881, 1771, 2690
PstI CTGCAG 1 cut(s) 931
PsuI RGATCY 1 cut(s) 2425
PsyI GACNNNGTC 2 cut(s) 2204, 2405
RsaI GTAC 6 cut(s) 925, 1439, 2290, 2537, 2683, 3107
RsaNI GTAC 6 cut(s) 924, 1438, 2289, 2536, 2682, 3106
RseI CAYNNNNRTG 4 cut(s) 1538, 1793, 2906, 3261
SatI GCNGC 5 cut(s) 1755, 2838, 3156, 3295, 3298
Sau3AI GATC 8 cut(s) 453, 2229, 2425, 2647, 2983, 3029, 3094, 3253
Sau96I GGNCC 3 cut(s) 881, 1771, 2690
SchI GAGTC 2 cut(s) 2249, 2984
ScrFI CCNGG 3 cut(s) 995, 2067, 2924
SduI GDGCHC 3 cut(s) 814, 2057, 2461
SfaNI GCATC 8 cut(s) 537, 904, 1439, 2086, 2299, 2482, 2549, 2759
SfcI CTRYAG 5 cut(s) 37, 927, 1549, 2631, 3176
SmiMI CAYNNNNRTG 4 cut(s) 1538, 1793, 2906, 3261
SmlI CTYRAG 1 cut(s) 394
SmoI CTYRAG 1 cut(s) 394
SseBI AGGCCT 2 cut(s) 1376, 2152
SsiI CCGC 4 cut(s) 123, 1240, 3034, 3073
SspI AATATT 3 cut(s) 1414, 2797, 3120
SspMI CTAG 8 cut(s) 348, 675, 1395, 1760, 2363, 2726, 2865, 3078
StuI AGGCCT 2 cut(s) 1376, 2152
StyD4I CCNGG 3 cut(s) 993, 2065, 2922
StyI CCWWGG 1 cut(s) 948
TaiI ACGT 2 cut(s) 1626, 3107
TaqI TCGA 3 cut(s) 293, 520, 3226
TaqII GACCGA 2 cut(s) 1683, 1826
TatI WGTACW 3 cut(s) 923, 1437, 2681
TfiI GAWTC 3 cut(s) 1267, 1517, 2266
TscAI CASTG 8 cut(s) 264, 370, 982, 1056, 2055, 2416, 2524, 3061
TseFI GTSAC 3 cut(s) 216, 1732, 2407
TseI GCWGC 5 cut(s) 1754, 2837, 3155, 3294, 3297
Tsp45I GTSAC 3 cut(s) 216, 1732, 2407
TspGWI ACGGA 1 cut(s) 199
TspRI CASTG 8 cut(s) 264, 370, 982, 1056, 2055, 2416, 2524, 3061
Tth111I GACNNNGTC 2 cut(s) 2204, 2405
VneI GTGCAC 1 cut(s) 2053
VspI ATTAAT 1 cut(s) 3116
XagI CCTNNNNNAGG 1 cut(s) 2921
XapI RAATTY 6 cut(s) 252, 466, 516, 849, 2330, 2446
XceI RCATGY 3 cut(s) 34, 385, 1481
XmiI GTMKAC 1 cut(s) 1459
XmnI GAANNNNTTC 2 cut(s) 1271, 2391
XspI CTAG 8 cut(s) 348, 675, 1395, 1760, 2363, 2726, 2865, 3078
Zsp2I ATGCAT 3 cut(s) 806, 1432, 2742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.