Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011824

Physical Location & Seq

Genomic Coordinates Forward (+)

36123906 .. 36126347

Gene Structure 2442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G415800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGGGGAAAGGGTTGTCTGGTGGTGAAGTGATTAGATTAAGGGGGATGATGGTAATTATGGTGGGAGTGACAGTGACTCTAATTAGATGTGGGGTGCTTGTGGAGGGCAATGTGTTCTCTAAACAGAAGATTCTGGAAGTTGAAAGAAAATTAACCCAACTTAGAAGGCCTGCAGTTAAAACCATTCAGAGTGAGGATGGTGATATCATTGATTGCATTGACATTTACAAGCAGCCAGCTTTTGACCATCCTGCTCTCAGAAACCACACCATCCAGATGGCACCAACATATGATCTGACGAAGGAGACAAAGACAATGACAAAAATGGATAGATTGAAGAAAAGGAGTGAACAATCTTCCGTGACAGCAAAGCAAACATGGAAGAAAAGTGGAAGCTGTCCTCAAGGAACGATCCCAGTCCGAAGAACTCGAAAAAAGGACCTGCTTAGAGCTAGCTCAGTTAAGGACTATGGAAGAAAGAAGCACAGTACCCTGTCTCGTCATGTTGCAGAGCCTAGTGACAACAAATCTGTCTACCTTCTACGAGCAAACCACTCGAAGGCAATATTGCTTACAGAAGGGTACAGTTATACTGGAGCCAAAGGAGACATAAAAGTTTGTGCCCCTTCTGTTGAGCTTGATGATGAATATACTACTTCTCAAGTTTGTCTCATAAACGGTCCAAGTTTTGCCTTTGAGAGTGTTGAATCTGGATGGGCGGTAAATCCAAGCGTCTATGGGGACAGAAATACTCGATTTTTCTTATACTGGACTGCTGATGGTTCAAAGAAAACTGGTTGCTTTGATCTTACCTGTCCTGGATTTGTTCAGACTAGCCATGAAATTGCTCTTGGTGCAGCAATTTATCCAATCTCTGCTCCTGATGGGCTTCCATATGAGATAATTGTCTACATCTTCAAGGATCCAGTAACAAGCAATTGGTGGGTGCAATACGGGGAGAGAATTAACATCGGTTATTGGCCTCCGGAGCTGTTTTTTGCATTGAGCTATCATGCAACAGGTGTTGAATGGGGAGGTGAAGTCTATAGCTCAAGAGTTGGAACTACTCCCCACACAAAAACAGATATGGGGAATGGACGCTTTGCTAGTACTGCGGGATTTTCAGGTGTCATAACAAGAATGAGAATACATGACAATTCACCTGCACTGAAAATCCCTGAATGGGCTGAGACTTACATGGACGAGTTCAATTGCTATGATGCTATCTATGTTGAAGACTACGTTGAAGATCCTGAGTTCTATTATGGAGGGCCTGGTAGAAATTATAAGTGCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Neprosin Neprosin_AP

Protein Analysis

433

Amino Acids

48.44

Weight (kDa)

8.4

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48230 AT5G19170
fragaria_vesca	FvH4_2g32290
prunus_persica	Prupe.1G415600_v2.0.a1 Prupe.1G415700_v2.0.a1 Prupe.1G415700_v2.0.a1 Prupe.1G415800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0310411
rosa_laevigata	RLG00000010484
rosa_multiflora	Rmu_co8348255.1_g000001 Rmu_sc0002896.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158540
rosa_rugosa	Rorug06G0380000
rosa_samantha	Rh6AG494000 Rh6BG503700 Rh6CG508900 Rh6DG494900
rosa_wichuraiana	Rw2G024720 Rw6G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1287
AarI	CACCTGC	1 cut(s)	1171
Acc36I	ACCTGC	2 cut(s)	450, 1171
AccB1I	GGYRCC	1 cut(s)	280
AccI	GTMKAC	2 cut(s)	534, 909
AccIII	TCCGGA	1 cut(s)	985
AciI	CCGC	2 cut(s)	719, 1115
AclWI	GGATC	4 cut(s)	406, 917, 930, 1244
AfaI	GTAC	3 cut(s)	490, 584, 1111
AfiI	CCNNNNNNNGG	2 cut(s)	559, 1183
AgsI	TTSAA	9 cut(s)	143, 337, 707, 786, 919, 1028, 1210, 1235, 1247
AjnI	CCWGG	2 cut(s)	817, 1273
AjuI	GAANNNNNNNTTGG	2 cut(s)	834, 866
AluBI	AGCT	8 cut(s)	239, 396, 452, 456, 637, 991, 1008, 1050
AluI	AGCT	8 cut(s)	239, 396, 452, 456, 637, 991, 1008, 1050
Alw26I	GTCTC	5 cut(s)	299, 501, 600, 674, 1184
AlwI	GGATC	4 cut(s)	406, 917, 930, 1244
Aor13HI	TCCGGA	1 cut(s)	985
AoxI	GGCC	3 cut(s)	167, 980, 1271
ApeKI	GCWGC	2 cut(s)	232, 857
AspS9I	GGNCC	3 cut(s)	439, 680, 1271
AsuHPI	GGTGA	4 cut(s)	35, 212, 1049, 1152
AsuNHI	GCTAGC	1 cut(s)	452
AvaII	GGWCC	2 cut(s)	439, 680
BaeGI	GKGCMC	2 cut(s)	625, 1295
BamHI	GGATCC	1 cut(s)	922
BanI	GGYRCC	1 cut(s)	280
BbsI	GAAGAC	1 cut(s)	1242
BbvI	GCAGC	2 cut(s)	244, 869
BccI	CCATC	8 cut(s)	43, 191, 255, 271, 278, 708, 773, 878
BcgI	CGANNNNNNTGC	2 cut(s)	537, 571
BciT130I	CCWGG	2 cut(s)	819, 1275
BcoDI	GTCTC	5 cut(s)	299, 501, 600, 674, 1184
BfaI	CTAG	4 cut(s)	453, 516, 834, 1107
BfmI	CTRYAG	2 cut(s)	171, 1045
BfuAI	ACCTGC	2 cut(s)	450, 1171
BisI	GCNGC	2 cut(s)	233, 858
BlsI	GCNGC	2 cut(s)	234, 859
BmcAI	AGTACT	1 cut(s)	1111
Bme1390I	CCNGG	2 cut(s)	819, 1275
Bme18I	GGWCC	2 cut(s)	439, 680
BmgT120I	GGNCC	3 cut(s)	439, 680, 1271
BmiI	GGNNCC	3 cut(s)	282, 598, 924
BmrFI	CCNGG	2 cut(s)	819, 1275
BmrI	ACTGGG	1 cut(s)	410
BmsI	GCATC	1 cut(s)	1210
BmtI	GCTAGC	1 cut(s)	456
BmuI	ACTGGG	1 cut(s)	410
BpiI	GAAGAC	1 cut(s)	1242
BpmI	CTGGAG	1 cut(s)	615
BpuEI	CTTGAG	3 cut(s)	387, 645, 1036
BsaWI	WCCGGW	1 cut(s)	985
BsaXI	ACNNNNNCTCC	4 cut(s)	57, 87, 1026, 1056
Bsc4I	CCNNNNNNNGG	2 cut(s)	559, 1183
Bse1I	ACTGG	5 cut(s)	416, 598, 773, 799, 926
Bse3DI	GCAATG	1 cut(s)	115
BseAI	TCCGGA	1 cut(s)	985
BseBI	CCWGG	2 cut(s)	819, 1275
BseGI	GGATG	5 cut(s)	51, 202, 247, 270, 719
BseLI	CCNNNNNNNGG	2 cut(s)	559, 1183
BseMI	GCAATG	1 cut(s)	115
BseMII	CTCAG	4 cut(s)	271, 471, 1179, 1245
BseNI	ACTGG	5 cut(s)	416, 598, 773, 799, 926
BseSI	GKGCMC	2 cut(s)	625, 1295
BseXI	GCAGC	2 cut(s)	244, 869
BsgI	GTGCAG	2 cut(s)	876, 1149
BshFI	GGCC	3 cut(s)	169, 982, 1273
BshNI	GGYRCC	1 cut(s)	280
BsiSI	CCGG	1 cut(s)	986
BslFI	GGGAC	1 cut(s)	755
BslI	CCNNNNNNNGG	2 cut(s)	559, 1183
BsmAI	GTCTC	5 cut(s)	299, 501, 600, 674, 1184
BsmFI	GGGAC	1 cut(s)	755
BsnI	GGCC	3 cut(s)	169, 982, 1273
Bsp1286I	GDGCHC	2 cut(s)	625, 1295
Bsp13I	TCCGGA	1 cut(s)	985
Bsp143I	GATC	5 cut(s)	292, 411, 805, 922, 1249
BspACI	CCGC	2 cut(s)	719, 1115
BspANI	GGCC	3 cut(s)	169, 982, 1273
BspCNI	CTCAG	4 cut(s)	270, 470, 1180, 1246
BspEI	TCCGGA	1 cut(s)	985
BspLI	GGNNCC	3 cut(s)	282, 598, 924
BspMAI	CTGCAG	1 cut(s)	175
BspMI	ACCTGC	2 cut(s)	450, 1171
BspOI	GCTAGC	1 cut(s)	456
BspPI	GGATC	4 cut(s)	406, 917, 930, 1244
BspT107I	GGYRCC	1 cut(s)	280
BsrDI	GCAATG	1 cut(s)	115
BsrI	ACTGG	5 cut(s)	416, 598, 773, 799, 926
BssMI	GATC	5 cut(s)	292, 411, 805, 922, 1249
Bst2UI	CCWGG	2 cut(s)	819, 1275
Bst4CI	ACNGT	4 cut(s)	73, 488, 587, 680
BstC8I	GCNNGC	3 cut(s)	171, 237, 454
BstDEI	CTNAG	6 cut(s)	161, 257, 446, 457, 1188, 1254
BstF5I	GGATG	5 cut(s)	51, 202, 247, 270, 719
BstKTI	GATC	5 cut(s)	295, 414, 808, 925, 1252
BstMAI	GTCTC	5 cut(s)	299, 501, 600, 674, 1184
BstMBI	GATC	5 cut(s)	292, 411, 805, 922, 1249
BstMWI	GCNNNNNNNGC	3 cut(s)	854, 988, 1112
BstNI	CCWGG	2 cut(s)	819, 1275
BstSCI	CCNGG	2 cut(s)	817, 1273
BstSFI	CTRYAG	2 cut(s)	171, 1045
BstSLI	GKGCMC	2 cut(s)	625, 1295
BstV1I	GCAGC	2 cut(s)	244, 869
BstV2I	GAAGAC	1 cut(s)	1242
BstX2I	RGATCY	2 cut(s)	922, 1249
BstXI	CCANNNNNNTGG	1 cut(s)	277
BstYI	RGATCY	2 cut(s)	922, 1249
BsuRI	GGCC	3 cut(s)	169, 982, 1273
BtsCI	GGATG	5 cut(s)	51, 202, 247, 270, 719
BtsIMutI	CAGTG	2 cut(s)	78, 1166
BveI	ACCTGC	2 cut(s)	450, 1171
Cac8I	GCNNGC	3 cut(s)	171, 237, 454
Cfr13I	GGNCC	3 cut(s)	439, 680, 1271
CseI	GACGC	2 cut(s)	721, 1107
Csp6I	GTAC	3 cut(s)	489, 583, 1110
CviAII	CATG	6 cut(s)	378, 503, 839, 1013, 1151, 1198
CviQI	GTAC	3 cut(s)	489, 583, 1110
DdeI	CTNAG	6 cut(s)	161, 257, 446, 457, 1188, 1254
DpnI	GATC	5 cut(s)	294, 413, 807, 924, 1251
DpnII	GATC	5 cut(s)	292, 411, 805, 922, 1249
Eco147I	AGGCCT	1 cut(s)	169
Eco32I	GATATC	1 cut(s)	205
Eco47I	GGWCC	2 cut(s)	439, 680
EcoO109I	RGGNCCY	2 cut(s)	439, 1271
EcoRII	CCWGG	2 cut(s)	817, 1273
EcoRV	GATATC	1 cut(s)	205
FaeI	CATG	6 cut(s)	381, 506, 842, 1016, 1154, 1201
FaqI	GGGAC	1 cut(s)	755
FatI	CATG	6 cut(s)	377, 502, 838, 1012, 1150, 1197
FauI	CCCGC	1 cut(s)	1108
FauNDI	CATATG	2 cut(s)	289, 895
FblI	GTMKAC	2 cut(s)	534, 909
Fnu4HI	GCNGC	2 cut(s)	233, 858
FokI	GGATG	5 cut(s)	58, 209, 234, 257, 726
Fsp4HI	GCNGC	2 cut(s)	233, 858
FspBI	CTAG	4 cut(s)	453, 516, 834, 1107
GluI	GCNGC	2 cut(s)	233, 858
GsuI	CTGGAG	1 cut(s)	615
HaeIII	GGCC	3 cut(s)	169, 982, 1273
HapII	CCGG	1 cut(s)	986
HgaI	GACGC	2 cut(s)	721, 1107
Hin1II	CATG	6 cut(s)	381, 506, 842, 1016, 1154, 1201
HinfI	GANTC	3 cut(s)	76, 130, 707
HpaII	CCGG	1 cut(s)	986
HphI	GGTGA	4 cut(s)	35, 212, 1049, 1152
Hpy166II	GTNNAC	3 cut(s)	350, 535, 910
Hpy188I	TCNGA	5 cut(s)	189, 260, 297, 422, 831
Hpy188III	TCNNGA	7 cut(s)	134, 274, 711, 881, 986, 1053, 1253
Hpy8I	GTNNAC	3 cut(s)	350, 535, 910
HpyAV	CCTTC	6 cut(s)	159, 295, 548, 553, 572, 636
HpyCH4III	ACNGT	4 cut(s)	73, 488, 587, 680
HpyCH4IV	ACGT	1 cut(s)	1242
HpyCH4V	TGCA	8 cut(s)	173, 216, 509, 857, 949, 1001, 1016, 1166
HpyF10VI	GCNNNNNNNGC	3 cut(s)	854, 988, 1112
HpyF3I	CTNAG	6 cut(s)	161, 257, 446, 457, 1188, 1254
HpySE526I	ACGT	1 cut(s)	1242
Hsp92II	CATG	6 cut(s)	381, 506, 842, 1016, 1154, 1201
Kpn2I	TCCGGA	1 cut(s)	985
Kzo9I	GATC	5 cut(s)	292, 411, 805, 922, 1249
LmnI	GCTCC	3 cut(s)	596, 883, 988
Lsp1109I	GCAGC	2 cut(s)	244, 869
LweI	GCATC	1 cut(s)	1210
MaeI	CTAG	4 cut(s)	453, 516, 834, 1107
MaeII	ACGT	1 cut(s)	1242
MaeIII	GTNAC	5 cut(s)	67, 73, 361, 518, 928
MalI	GATC	5 cut(s)	294, 413, 807, 924, 1251
MboI	GATC	5 cut(s)	292, 411, 805, 922, 1249
MboII	GAAGA	9 cut(s)	139, 348, 349, 394, 435, 486, 907, 1247, 1259
MfeI	CAATTG	2 cut(s)	937, 1210
MflI	RGATCY	2 cut(s)	922, 1249
MhlI	GDGCHC	2 cut(s)	625, 1295
MlyI	GAGTC	1 cut(s)	70
MmeI	TCCRAC	1 cut(s)	1039
MnlI	CCTC	6 cut(s)	97, 187, 411, 993, 1028, 1262
MroI	TCCGGA	1 cut(s)	985
MseI	TTAA	6 cut(s)	38, 152, 177, 462, 966, 1297
MslI	CAYNNNNRTG	1 cut(s)	275
MspI	CCGG	1 cut(s)	986
MspR9I	CCNGG	2 cut(s)	819, 1275
MunI	CAATTG	2 cut(s)	937, 1210
MvaI	CCWGG	2 cut(s)	819, 1275
MwoI	GCNNNNNNNGC	3 cut(s)	854, 988, 1112
NdeI	CATATG	2 cut(s)	289, 895
NdeII	GATC	5 cut(s)	292, 411, 805, 922, 1249
NheI	GCTAGC	1 cut(s)	452
NlaIII	CATG	6 cut(s)	381, 506, 842, 1016, 1154, 1201
NlaIV	GGNNCC	3 cut(s)	282, 598, 924
NmuCI	GTSAC	4 cut(s)	67, 73, 361, 518
PaqCI	CACCTGC	1 cut(s)	1171
PceI	AGGCCT	1 cut(s)	169
PfeI	GAWTC	2 cut(s)	130, 707
PfoI	TCCNGGA	1 cut(s)	817
PkrI	GCNGC	2 cut(s)	234, 859
PleI	GAGTC	1 cut(s)	70
PpsI	GAGTC	1 cut(s)	70
PpuMI	RGGWCCY	1 cut(s)	439
PsiI	TTATAA	1 cut(s)	1287
Psp5II	RGGWCCY	1 cut(s)	439
Psp6I	CCWGG	2 cut(s)	817, 1273
PspGI	CCWGG	2 cut(s)	817, 1273
PspN4I	GGNNCC	3 cut(s)	282, 598, 924
PspPI	GGNCC	3 cut(s)	439, 680, 1271
PspPPI	RGGWCCY	1 cut(s)	439
PstI	CTGCAG	1 cut(s)	175
PsuI	RGATCY	2 cut(s)	922, 1249
RsaI	GTAC	3 cut(s)	490, 584, 1111
RsaNI	GTAC	3 cut(s)	489, 583, 1110
RseI	CAYNNNNRTG	1 cut(s)	275
SaqAI	TTAA	6 cut(s)	38, 152, 177, 462, 966, 1297
SatI	GCNGC	2 cut(s)	233, 858
Sau3AI	GATC	5 cut(s)	292, 411, 805, 922, 1249
Sau96I	GGNCC	3 cut(s)	439, 680, 1271
ScaI	AGTACT	1 cut(s)	1111
SchI	GAGTC	1 cut(s)	70
ScrFI	CCNGG	2 cut(s)	819, 1275
SduI	GDGCHC	2 cut(s)	625, 1295
SfaNI	GCATC	1 cut(s)	1210
SfcI	CTRYAG	2 cut(s)	171, 1045
SinI	GGWCC	2 cut(s)	439, 680
SmiMI	CAYNNNNRTG	1 cut(s)	275
SmlI	CTYRAG	3 cut(s)	402, 660, 1051
SmoI	CTYRAG	3 cut(s)	402, 660, 1051
SseBI	AGGCCT	1 cut(s)	169
SsiI	CCGC	2 cut(s)	719, 1115
SspI	AATATT	1 cut(s)	567
SspMI	CTAG	4 cut(s)	453, 516, 834, 1107
StuI	AGGCCT	1 cut(s)	169
StyD4I	CCNGG	2 cut(s)	817, 1273
TaaI	ACNGT	4 cut(s)	73, 488, 587, 680
TaiI	ACGT	1 cut(s)	1245
TaqI	TCGA	3 cut(s)	430, 557, 754
TatI	WGTACW	1 cut(s)	1109
TfiI	GAWTC	2 cut(s)	130, 707
Tru1I	TTAA	6 cut(s)	38, 152, 177, 462, 966, 1297
Tru9I	TTAA	6 cut(s)	38, 152, 177, 462, 966, 1297
TscAI	CASTG	2 cut(s)	78, 1173
TseFI	GTSAC	4 cut(s)	67, 73, 361, 518
TseI	GCWGC	2 cut(s)	232, 857
Tsp45I	GTSAC	4 cut(s)	67, 73, 361, 518
TspDTI	ATGAA	2 cut(s)	660, 855
TspGWI	ACGGA	1 cut(s)	349
TspRI	CASTG	2 cut(s)	78, 1173
VpaK11BI	GGWCC	2 cut(s)	439, 680
XmiI	GTMKAC	2 cut(s)	534, 909
XspI	CTAG	4 cut(s)	453, 516, 834, 1107
ZrmI	AGTACT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.