Rorug06G0380000

Neprosin

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
52599672 .. 52600534
863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0380000.1

Sequence Viewer

Length: 267 bp
ATGGTGTCGAAGCTTCGGAACCCTACAGGTGCGAAAGTTGTCCCACAGGTGGTGGCGAAGCCCAAGACAACGCCACAAACGGTGGACAAACTCAAGGCGGAGGCTAATTGTTTCAAGCCCAAAAAGGGCTCTGTTTTCCCCGCAAAAAGAAGGCTGGTGAAGGCCATGGTGTTCCATTCCATTCTGAAATTCGTCGCCTCTGTTTTCTGTTCCATTAAAGAAGCCAATCCCATCTCACTTTCACACCCCAAAATCCCAAATTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

9.63

Weight (kDa)

10.4

Isoelectric Point (pI)

17.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 98, 141
AcsI RAATTY 1 cut(s) 188
AfiI CCNNNNNNNGG 2 cut(s) 49, 125
AgsI TTSAA 1 cut(s) 115
AluBI AGCT 1 cut(s) 13
AluI AGCT 1 cut(s) 13
AoxI GGCC 1 cut(s) 162
ApoI RAATTY 1 cut(s) 188
AsuHPI GGTGA 1 cut(s) 169
BanII GRGCYC 1 cut(s) 131
BccI CCATC 1 cut(s) 239
BfmI CTRYAG 1 cut(s) 24
BmiI GGNNCC 1 cut(s) 20
BpuEI CTTGAG 1 cut(s) 77
BsaJI CCNNGG 1 cut(s) 165
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 125
BseDI CCNNGG 1 cut(s) 165
BseLI CCNNNNNNNGG 2 cut(s) 49, 125
BshFI GGCC 1 cut(s) 164
BslFI GGGAC 1 cut(s) 26
BslI CCNNNNNNNGG 2 cut(s) 49, 125
BsmFI GGGAC 1 cut(s) 26
BsnI GGCC 1 cut(s) 164
Bsp1286I GDGCHC 1 cut(s) 131
Bsp19I CCATGG 1 cut(s) 165
BspACI CCGC 2 cut(s) 98, 141
BspANI GGCC 1 cut(s) 164
BspLI GGNNCC 1 cut(s) 20
BssECI CCNNGG 1 cut(s) 165
BssT1I CCWWGG 1 cut(s) 165
Bst4CI ACNGT 1 cut(s) 82
BstDSI CCRYGG 1 cut(s) 165
BstSFI CTRYAG 1 cut(s) 24
BsuRI GGCC 1 cut(s) 164
BtgI CCRYGG 1 cut(s) 165
CviAII CATG 1 cut(s) 166
CviJI RGCY 8 cut(s) 13, 61, 104, 118, 129, 154, 164, 224
CviKI_1 RGCY 8 cut(s) 13, 61, 104, 118, 129, 154, 164, 224
EciI GGCGGA 1 cut(s) 113
Eco130I CCWWGG 1 cut(s) 165
Eco24I GRGCYC 1 cut(s) 131
EcoT14I CCWWGG 1 cut(s) 165
EcoT38I GRGCYC 1 cut(s) 131
ErhI CCWWGG 1 cut(s) 165
FaeI CATG 1 cut(s) 169
FaiI YATR 1 cut(s) 167
FaqI GGGAC 1 cut(s) 26
FatI CATG 1 cut(s) 165
FauI CCCGC 1 cut(s) 148
FriOI GRGCYC 1 cut(s) 131
HaeIII GGCC 1 cut(s) 164
Hin1II CATG 1 cut(s) 169
HindIII AAGCTT 1 cut(s) 11
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 1 cut(s) 85
Hpy188I TCNGA 2 cut(s) 18, 186
Hpy8I GTNNAC 1 cut(s) 85
Hpy99I CGWCG 1 cut(s) 197
HpyAV CCTTC 2 cut(s) 144, 154
HpyCH4III ACNGT 1 cut(s) 82
Hsp92II CATG 1 cut(s) 169
LpnPI CCDG 3 cut(s) 12, 32, 140
MhlI GDGCHC 1 cut(s) 131
MluCI AATT 3 cut(s) 106, 188, 259
MnlI CCTC 2 cut(s) 94, 208
MseI TTAA 1 cut(s) 216
NcoI CCATGG 1 cut(s) 165
NlaIII CATG 1 cut(s) 169
NlaIV GGNNCC 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 20
SaqAI TTAA 1 cut(s) 216
SduI GDGCHC 1 cut(s) 131
SetI ASST 3 cut(s) 15, 31, 51
SfcI CTRYAG 1 cut(s) 24
SgeI CNNG 8 cut(s) 39, 59, 76, 106, 127, 152, 167, 178
SmlI CTYRAG 1 cut(s) 92
SmoI CTYRAG 1 cut(s) 92
Sse9I AATT 3 cut(s) 106, 188, 259
SsiI CCGC 2 cut(s) 98, 141
StyI CCWWGG 1 cut(s) 165
TaaI ACNGT 1 cut(s) 82
TaqI TCGA 1 cut(s) 8
TasI AATT 3 cut(s) 106, 188, 259
Tru1I TTAA 1 cut(s) 216
Tru9I TTAA 1 cut(s) 216
XapI RAATTY 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.