Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011824

Physical Location & Seq

Genomic Coordinates Forward (+)

1941900 .. 1947357

Gene Structure 5458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00158540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGTGCTCTTCGCGCTACAGATAACGGCCGAGCTCGAAAACCTCACTAATCTTCAGCCCCGGGAGGCTGCGACGATCCAGAATTTACCTATCTCTTCAAGCTGTGGTGAGCCGACTCAGAAGGAAACTGCTTTGAGCTTGAGCGAGTCTGTTCCTCTTCCGGTGGGCAAGGGAACCACTAATCTCATTCAGAAGTGCAAGTTTTGTGGCAGGGAAGGAACCGTAACAATGATGCCTGGTCGTGGTCAACCATTGACTGAGGAGTTAAGTGAAGCAGGGAAGTTTGCCCCATTGATGGTGTTCGAATGCAGGGGTTATGAGCCTGTGGATTATGTCTTTGGTGGCGGGTGGAAAGTTCAATCTTTGGCTGGGACAACATTTGACGATGTTGACTTGTCAGAGGAGGAGTTTGCTGAATATGACGAGAAGGGAGAGTGCCCAGTTAACATGTTCTCTAAACAGAAGGTTTTGGAAGTTGAAAGAAAATTAAGCCAACTTAGAAAACCTGCAGTTAAAAGCATTCAGAGTGAAGATGGTGATATCATTGATTGCATTGACATTTACAAGCAGCCAGCTTTTGATCATCCTGCTCTCAAAAACCACACCATCCAGATGGCACCTAGTTATGATCCAACAAAGGAGACAGAGTCGACAATGACCAAATTCGAAAGATTAGAGAGGAAGAGGAACCAACAATCTTCCATGATGGTGACACAACCATGGAAGAAGAATGGAAGCTGTCCACAAGGAACAATCCCGATGCGAAGAATCAGAAAAGAGGACCTGCTCCGAGCTAGCTTGGTTGAGGCCTATGGAAGGAAGAAACATAGCTCTTCTCGTCCTCATGTTTCACATGAGTCTAGTACTAGTGACAGCAACAGAACTGTGAACGTTCTACAAGCAAATCACTCGAAGGCAATATTGCTTACCGAAGGATACAGATATAATGGAGCCAAAGGAGATATCAAAGTTTGGACTCCTAATGTTGATTTTGATGATGATTACACTACTTCTAAAGTTTGCCTCATCAATGGTCCTTATTGGGCATTTGAGAGTGTTGAATCTGGATGGGCGGTGAATCCGAGTGTGTACGGAGACAGGCAAACTCGATTTATGGTGTATTGGACGGTCGATGGTTCAAAGAAAACAGGTTGCTTTGATCTCACTTGTCCTGGATTTGTTCAAACTAGCCATGAGATTGCTCTTGGTGCTGCAATTTACCCAATCTCTGTTCCTTATGGCCTTCCATACGAAATCATCGTCTACGTCTTCAAGGACCCCGTAACAAGCAATTGGTGGGTGCAATACGGGGAGAAAATCAACATCGGATACTGGCCACCGGAGCTGTTTATGGCGTTGCGTGTCCACGCCGAAGCGGTTGAGTGGGGAGGTGGTGAAGTGTATAGTGCAAGAGTGGGTACTAATCCACACACAAAAACAGGAATGGGTAATGGAAACTTTCCTGATGGCATTTTTGGGGATTCAGGGGTCATTAGAAGAATCAGAATTCATGACAATTCAGCTGAACTCAAATTCCCGGAATGGGTTGAGACTTATGCCGACGAGTTCAACTGTTATGATGTTGATTATGTTTCCGATTACCTTGAAGATCCTGAGTTCTATTATGGAGGGCCTGGCCATAATCCCAAGTGCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Neprosin Neprosin_AP

Protein Analysis

552

Amino Acids

61.98

Weight (kDa)

5.25

Isoelectric Point (pI)

36.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CXXC_Zn-b_euk	PF05907	5 - 150	8.6e-40	CXXC motif containing zinc binding protein, eukaryotic
Neprosin_AP	PF14365	173 - 287	3.3e-39	Neprosin activation peptide
Neprosin	PF03080	333 - 545	2.7e-64	Neprosin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48230 AT5G19170
fragaria_vesca	FvH4_2g32290
prunus_persica	Prupe.1G415600_v2.0.a1 Prupe.1G415700_v2.0.a1 Prupe.1G415700_v2.0.a1 Prupe.1G415800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0310411
rosa_laevigata	RLG00000010484
rosa_multiflora	Rmu_co8348255.1_g000001 Rmu_sc0002896.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158540
rosa_rugosa	Rorug06G0380000
rosa_samantha	Rh6AG494000 Rh6BG503700 Rh6CG508900 Rh6DG494900
rosa_wichuraiana	Rw2G024720 Rw6G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	514, 792
AccB1I	GGYRCC	1 cut(s)	616
AccI	GTMKAC	2 cut(s)	650, 1263
AccII	CGCG	1 cut(s)	14
AciI	CCGC	3 cut(s)	345, 1073, 1376
AclI	AACGTT	1 cut(s)	891
AclWI	GGATC	3 cut(s)	70, 623, 1604
AcoI	YGGCCR	3 cut(s)	27, 1334, 1636
AcsI	RAATTY	4 cut(s)	82, 662, 1506, 1532
AcuI	CTGAAG	1 cut(s)	38
AfaI	GTAC	3 cut(s)	865, 1091, 1420
AfiI	CCNNNNNNNGG	4 cut(s)	242, 295, 816, 1543
AflIII	ACRYGT	1 cut(s)	447
AgsI	TTSAA	9 cut(s)	99, 359, 479, 1061, 1140, 1184, 1273, 1570, 1607
AhlI	ACTAGT	1 cut(s)	866
AjnI	CCWGG	3 cut(s)	235, 1171, 1633
AloI	GAACNNNNNNTCC	2 cut(s)	1518, 1550
Alw21I	GWGCWC	2 cut(s)	9, 36
Alw26I	GTCTC	3 cut(s)	635, 1089, 1544
AlwI	GGATC	3 cut(s)	70, 623, 1604
Ama87I	CYCGRG	1 cut(s)	60
AoxI	GGCC	6 cut(s)	27, 807, 1240, 1334, 1631, 1636
ApeKI	GCWGC	3 cut(s)	68, 568, 1211
ApoI	RAATTY	4 cut(s)	82, 662, 1506, 1532
ArsI	GACNNNNNNTTYG	2 cut(s)	1245, 1277
AspLEI	GCGC	1 cut(s)	16
AspS9I	GGNCC	4 cut(s)	781, 1034, 1276, 1631
AsuC2I	CCSGG	3 cut(s)	61, 62, 1538
AsuHPI	GGTGA	5 cut(s)	119, 548, 721, 1087, 1406
AsuII	TTCGAA	2 cut(s)	303, 666
AsuNHI	GCTAGC	1 cut(s)	794
AvaI	CYCGRG	1 cut(s)	60
AvaII	GGWCC	3 cut(s)	781, 1034, 1276
BaeGI	GKGCMC	2 cut(s)	440, 1655
BalI	TGGCCA	2 cut(s)	1336, 1638
BanI	GGYRCC	1 cut(s)	616
BanII	GRGCYC	1 cut(s)	36
BbsI	GAAGAC	1 cut(s)	1261
Bbv12I	GWGCWC	2 cut(s)	9, 36
BbvI	GCAGC	3 cut(s)	55, 580, 1198
BccI	CCATC	8 cut(s)	289, 527, 607, 614, 700, 1062, 1127, 1460
BceAI	ACGGC	1 cut(s)	42
BcgI	CGANNNNNNTGC	2 cut(s)	891, 925
BciT130I	CCWGG	3 cut(s)	237, 1173, 1635
BciVI	GTATCC	2 cut(s)	929, 1322
BclI	TGATCA	1 cut(s)	580
BcnI	CCSGG	3 cut(s)	61, 62, 1538
BcoDI	GTCTC	3 cut(s)	635, 1089, 1544
BcuI	ACTAGT	1 cut(s)	866
BfaI	CTAG	5 cut(s)	621, 795, 861, 867, 1188
BfmI	CTRYAG	2 cut(s)	17, 507
BfuAI	ACCTGC	2 cut(s)	514, 792
BfuI	GTATCC	2 cut(s)	929, 1322
BisI	GCNGC	3 cut(s)	69, 569, 1212
BlsI	GCNGC	3 cut(s)	70, 570, 1213
BmcAI	AGTACT	1 cut(s)	865
Bme1390I	CCNGG	6 cut(s)	61, 62, 237, 1173, 1538, 1635
Bme18I	GGWCC	3 cut(s)	781, 1034, 1276
BmeT110I	CYCGRG	1 cut(s)	60
BmgT120I	GGNCC	4 cut(s)	781, 1034, 1276, 1631
BmiI	GGNNCC	6 cut(s)	175, 220, 618, 689, 952, 1278
BmrFI	CCNGG	6 cut(s)	61, 62, 237, 1173, 1538, 1635
BmrI	ACTGGG	1 cut(s)	434
BmsI	GCATC	2 cut(s)	222, 750
BmtI	GCTAGC	1 cut(s)	798
BmuI	ACTGGG	1 cut(s)	434
BpiI	GAAGAC	1 cut(s)	1261
Bpu14I	TTCGAA	2 cut(s)	303, 666
BpuEI	CTTGAG	1 cut(s)	160
BpuMI	CCSGG	3 cut(s)	61, 62, 1538
BsaJI	CCNNGG	3 cut(s)	59, 60, 719
BsaWI	WCCGGW	2 cut(s)	160, 1339
BsaXI	ACNNNNNCTCC	2 cut(s)	632, 662
Bsc4I	CCNNNNNNNGG	4 cut(s)	242, 295, 816, 1543
Bse1I	ACTGG	2 cut(s)	440, 1337
BseBI	CCWGG	3 cut(s)	237, 1173, 1635
BseDI	CCNNGG	3 cut(s)	59, 60, 719
BseGI	GGATG	3 cut(s)	583, 606, 1073
BseLI	CCNNNNNNNGG	4 cut(s)	242, 295, 816, 1543
BseMII	CTCAG	3 cut(s)	131, 249, 1605
BseNI	ACTGG	2 cut(s)	440, 1337
BseRI	GAGGAG	3 cut(s)	275, 416, 419
BseSI	GKGCMC	2 cut(s)	440, 1655
BseX3I	CGGCCG	1 cut(s)	27
BseXI	GCAGC	3 cut(s)	55, 580, 1198
BseYI	CCCAGC	1 cut(s)	368
Bsh1236I	CGCG	1 cut(s)	14
Bsh1285I	CGRYCG	2 cut(s)	30, 1131
BshFI	GGCC	6 cut(s)	29, 809, 1242, 1336, 1633, 1638
BshNI	GGYRCC	1 cut(s)	616
BsiEI	CGRYCG	2 cut(s)	30, 1131
BsiHKAI	GWGCWC	2 cut(s)	9, 36
BsiHKCI	CYCGRG	1 cut(s)	60
BsiSI	CCGG	4 cut(s)	61, 161, 1340, 1538
BslFI	GGGAC	1 cut(s)	385
BslI	CCNNNNNNNGG	4 cut(s)	242, 295, 816, 1543
BsmAI	GTCTC	3 cut(s)	635, 1089, 1544
BsmFI	GGGAC	1 cut(s)	385
BsmI	GAATGC	2 cut(s)	311, 519
BsnI	GGCC	6 cut(s)	29, 809, 1242, 1336, 1633, 1638
BsoBI	CYCGRG	1 cut(s)	60
Bsp119I	TTCGAA	2 cut(s)	303, 666
Bsp1286I	GDGCHC	4 cut(s)	9, 36, 440, 1655
Bsp143I	GATC	5 cut(s)	75, 580, 628, 1159, 1609
Bsp19I	CCATGG	1 cut(s)	719
BspACI	CCGC	3 cut(s)	345, 1073, 1376
BspANI	GGCC	6 cut(s)	29, 809, 1242, 1336, 1633, 1638
BspCNI	CTCAG	3 cut(s)	130, 250, 1606
BspFNI	CGCG	1 cut(s)	14
BspHI	TCATGA	1 cut(s)	1510
BspLI	GGNNCC	6 cut(s)	175, 220, 618, 689, 952, 1278
BspMAI	CTGCAG	1 cut(s)	511
BspMI	ACCTGC	2 cut(s)	514, 792
BspOI	GCTAGC	1 cut(s)	798
BspPI	GGATC	3 cut(s)	70, 623, 1604
BspQI	GCTCTTC	2 cut(s)	14, 838
BspT104I	TTCGAA	2 cut(s)	303, 666
BspT107I	GGYRCC	1 cut(s)	616
BsrI	ACTGG	2 cut(s)	440, 1337
BssECI	CCNNGG	3 cut(s)	59, 60, 719
BssMI	GATC	5 cut(s)	75, 580, 628, 1159, 1609
BssT1I	CCWWGG	1 cut(s)	719
Bst2UI	CCWGG	3 cut(s)	237, 1173, 1635
Bst4CI	ACNGT	4 cut(s)	223, 886, 1129, 1574
Bst6I	CTCTTC	5 cut(s)	14, 100, 162, 677, 838
BstBI	TTCGAA	2 cut(s)	303, 666
BstC8I	GCNNGC	2 cut(s)	573, 796
BstDEI	CTNAG	4 cut(s)	117, 258, 497, 1614
BstDSI	CCRYGG	1 cut(s)	719
BstENI	CCTNNNNNAGG	1 cut(s)	814
BstF5I	GGATG	3 cut(s)	583, 606, 1073
BstFNI	CGCG	1 cut(s)	14
BstHHI	GCGC	1 cut(s)	16
BstKTI	GATC	5 cut(s)	78, 583, 631, 1162, 1612
BstMAI	GTCTC	3 cut(s)	635, 1089, 1544
BstMBI	GATC	5 cut(s)	75, 580, 628, 1159, 1609
BstMCI	CGRYCG	2 cut(s)	30, 1131
BstMWI	GCNNNNNNNGC	3 cut(s)	13, 1208, 1342
BstNI	CCWGG	3 cut(s)	237, 1173, 1635
BstNSI	RCATGY	1 cut(s)	451
BstSCI	CCNGG	6 cut(s)	59, 60, 235, 1171, 1536, 1633
BstSFI	CTRYAG	2 cut(s)	17, 507
BstSLI	GKGCMC	2 cut(s)	440, 1655
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	3 cut(s)	55, 580, 1198
BstV2I	GAAGAC	1 cut(s)	1261
BstX2I	RGATCY	1 cut(s)	1609
BstXI	CCANNNNNNTGG	1 cut(s)	613
BstYI	RGATCY	1 cut(s)	1609
BstZI	CGGCCG	1 cut(s)	27
BsuI	GTATCC	2 cut(s)	929, 1322
BsuRI	GGCC	6 cut(s)	29, 809, 1242, 1336, 1633, 1638
BtgI	CCRYGG	1 cut(s)	719
BtsCI	GGATG	3 cut(s)	583, 606, 1073
BveI	ACCTGC	2 cut(s)	514, 792
Cac8I	GCNNGC	2 cut(s)	573, 796
CciI	TCATGA	1 cut(s)	1510
CfoI	GCGC	1 cut(s)	16
Cfr13I	GGNCC	4 cut(s)	781, 1034, 1276, 1631
Cfr9I	CCCGGG	1 cut(s)	60
Csp6I	GTAC	3 cut(s)	864, 1090, 1419
CspCI	CAANNNNNGTGG	2 cut(s)	187, 222
CviAII	CATG	7 cut(s)	448, 703, 720, 845, 854, 1193, 1511
CviQI	GTAC	3 cut(s)	864, 1090, 1419
DdeI	CTNAG	4 cut(s)	117, 258, 497, 1614
DpnI	GATC	5 cut(s)	77, 582, 630, 1161, 1611
DpnII	GATC	5 cut(s)	75, 580, 628, 1159, 1609
EaeI	YGGCCR	3 cut(s)	27, 1334, 1636
EagI	CGGCCG	1 cut(s)	27
Eam1104I	CTCTTC	5 cut(s)	14, 100, 162, 677, 838
EarI	CTCTTC	5 cut(s)	14, 100, 162, 677, 838
Ecl136II	GAGCTC	1 cut(s)	34
EclXI	CGGCCG	1 cut(s)	27
Eco130I	CCWWGG	1 cut(s)	719
Eco147I	AGGCCT	1 cut(s)	809
Eco24I	GRGCYC	1 cut(s)	36
Eco32I	GATATC	2 cut(s)	541, 964
Eco47I	GGWCC	3 cut(s)	781, 1034, 1276
Eco52I	CGGCCG	1 cut(s)	27
Eco53kI	GAGCTC	1 cut(s)	34
Eco57I	CTGAAG	1 cut(s)	38
Eco88I	CYCGRG	1 cut(s)	60
EcoICRI	GAGCTC	1 cut(s)	34
EcoNI	CCTNNNNNAGG	1 cut(s)	814
EcoO109I	RGGNCCY	3 cut(s)	781, 1276, 1631
EcoRI	GAATTC	1 cut(s)	1506
EcoRII	CCWGG	3 cut(s)	235, 1171, 1633
EcoRV	GATATC	2 cut(s)	541, 964
EcoT14I	CCWWGG	1 cut(s)	719
EcoT38I	GRGCYC	1 cut(s)	36
ErhI	CCWWGG	1 cut(s)	719
FaeI	CATG	7 cut(s)	451, 706, 723, 848, 857, 1196, 1514
FaqI	GGGAC	1 cut(s)	385
FatI	CATG	7 cut(s)	447, 702, 719, 844, 853, 1192, 1510
FauI	CCCGC	1 cut(s)	338
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	2 cut(s)	650, 1263
Fnu4HI	GCNGC	3 cut(s)	69, 569, 1212
FokI	GGATG	3 cut(s)	570, 593, 1080
FriOI	GRGCYC	1 cut(s)	36
Fsp4HI	GCNGC	3 cut(s)	69, 569, 1212
FspBI	CTAG	5 cut(s)	621, 795, 861, 867, 1188
GlaI	GCGC	1 cut(s)	15
GluI	GCNGC	3 cut(s)	69, 569, 1212
GsaI	CCCAGC	1 cut(s)	372
HaeIII	GGCC	6 cut(s)	29, 809, 1242, 1336, 1633, 1638
HapII	CCGG	4 cut(s)	61, 161, 1340, 1538
HhaI	GCGC	1 cut(s)	16
Hin1II	CATG	7 cut(s)	451, 706, 723, 848, 857, 1196, 1514
Hin6I	GCGC	1 cut(s)	14
HinP1I	GCGC	1 cut(s)	14
HincII	GTYRAC	4 cut(s)	248, 391, 445, 651
HindII	GTYRAC	4 cut(s)	248, 391, 445, 651
HpaI	GTTAAC	1 cut(s)	445
HpaII	CCGG	4 cut(s)	61, 161, 1340, 1538
HphI	GGTGA	5 cut(s)	119, 548, 721, 1087, 1406
Hpy166II	GTNNAC	9 cut(s)	248, 391, 445, 651, 743, 889, 1090, 1264, 1366
Hpy188III	TCNNGA	7 cut(s)	79, 610, 757, 1065, 1463, 1511, 1613
Hpy8I	GTNNAC	9 cut(s)	248, 391, 445, 651, 743, 889, 1090, 1264, 1366
Hpy99I	CGWCG	2 cut(s)	76, 1565
HpyAV	CCTTC	8 cut(s)	115, 209, 421, 457, 810, 907, 926, 1253
HpyCH4III	ACNGT	4 cut(s)	223, 886, 1129, 1574
HpyCH4IV	ACGT	2 cut(s)	891, 1266
HpyCH4V	TGCA	7 cut(s)	198, 309, 509, 552, 1214, 1303, 1409
HpyF10VI	GCNNNNNNNGC	3 cut(s)	13, 1208, 1342
HpyF3I	CTNAG	4 cut(s)	117, 258, 497, 1614
HpySE526I	ACGT	2 cut(s)	891, 1266
Hsp92II	CATG	7 cut(s)	451, 706, 723, 848, 857, 1196, 1514
HspAI	GCGC	1 cut(s)	14
Ksp22I	TGATCA	1 cut(s)	580
KspAI	GTTAAC	1 cut(s)	445
Kzo9I	GATC	5 cut(s)	75, 580, 628, 1159, 1609
LguI	GCTCTTC	2 cut(s)	14, 838
LmnI	GCTCC	3 cut(s)	792, 950, 1342
Lsp1109I	GCAGC	3 cut(s)	55, 580, 1198
LweI	GCATC	2 cut(s)	222, 750
MaeI	CTAG	5 cut(s)	621, 795, 861, 867, 1188
MaeII	ACGT	2 cut(s)	891, 1266
MaeIII	GTNAC	4 cut(s)	223, 709, 869, 1282
MalI	GATC	5 cut(s)	77, 582, 630, 1161, 1611
MboI	GATC	5 cut(s)	75, 580, 628, 1159, 1609
MfeI	CAATTG	1 cut(s)	1291
MflI	RGATCY	1 cut(s)	1609
MhlI	GDGCHC	4 cut(s)	9, 36, 440, 1655
MlsI	TGGCCA	2 cut(s)	1336, 1638
MluCI	AATT	8 cut(s)	82, 485, 662, 1215, 1291, 1506, 1516, 1532
MluNI	TGGCCA	2 cut(s)	1336, 1638
MlyI	GAGTC	5 cut(s)	109, 155, 656, 866, 970
MmeI	TCCRAC	1 cut(s)	656
Mox20I	TGGCCA	2 cut(s)	1336, 1638
MscI	TGGCCA	2 cut(s)	1336, 1638
MseI	TTAA	5 cut(s)	266, 444, 488, 513, 1657
MslI	CAYNNNNRTG	3 cut(s)	611, 707, 718
Msp20I	TGGCCA	2 cut(s)	1336, 1638
MspA1I	CMGCKG	1 cut(s)	1523
MspI	CCGG	4 cut(s)	61, 161, 1340, 1538
MspR9I	CCNGG	6 cut(s)	61, 62, 237, 1173, 1538, 1635
MunI	CAATTG	1 cut(s)	1291
Mva1269I	GAATGC	2 cut(s)	311, 519
MvaI	CCWGG	3 cut(s)	237, 1173, 1635
MvnI	CGCG	1 cut(s)	14
MwoI	GCNNNNNNNGC	3 cut(s)	13, 1208, 1342
NciI	CCSGG	3 cut(s)	61, 62, 1538
NcoI	CCATGG	1 cut(s)	719
NdeII	GATC	5 cut(s)	75, 580, 628, 1159, 1609
NheI	GCTAGC	1 cut(s)	794
NlaIII	CATG	7 cut(s)	451, 706, 723, 848, 857, 1196, 1514
NlaIV	GGNNCC	6 cut(s)	175, 220, 618, 689, 952, 1278
NmeAIII	GCCGAG	1 cut(s)	55
NmuCI	GTSAC	2 cut(s)	709, 869
NspI	RCATGY	1 cut(s)	451
NspV	TTCGAA	2 cut(s)	303, 666
PagI	TCATGA	1 cut(s)	1510
PceI	AGGCCT	1 cut(s)	809
PciI	ACATGT	1 cut(s)	447
PciSI	GCTCTTC	2 cut(s)	14, 838
PcsI	WCGNNNNNNNCGW	1 cut(s)	1257
PctI	GAATGC	2 cut(s)	311, 519
PfeI	GAWTC	5 cut(s)	768, 1061, 1078, 1481, 1500
PflFI	GACNNNGTC	1 cut(s)	646
PfoI	TCCNGGA	2 cut(s)	1171, 1536
PkrI	GCNGC	3 cut(s)	70, 570, 1213
PleI	GAGTC	5 cut(s)	109, 154, 655, 865, 970
PpsI	GAGTC	5 cut(s)	109, 154, 655, 865, 970
PpuMI	RGGWCCY	2 cut(s)	781, 1276
PscI	ACATGT	1 cut(s)	447
Psp124BI	GAGCTC	1 cut(s)	36
Psp1406I	AACGTT	1 cut(s)	891
Psp5II	RGGWCCY	2 cut(s)	781, 1276
Psp6I	CCWGG	3 cut(s)	235, 1171, 1633
PspFI	CCCAGC	1 cut(s)	368
PspGI	CCWGG	3 cut(s)	235, 1171, 1633
PspN4I	GGNNCC	6 cut(s)	175, 220, 618, 689, 952, 1278
PspPI	GGNCC	4 cut(s)	781, 1034, 1276, 1631
PspPPI	RGGWCCY	2 cut(s)	781, 1276
PstI	CTGCAG	1 cut(s)	511
PsuI	RGATCY	1 cut(s)	1609
PsyI	GACNNNGTC	1 cut(s)	646
PvuII	CAGCTG	1 cut(s)	1523
RsaI	GTAC	3 cut(s)	865, 1091, 1420
RsaNI	GTAC	3 cut(s)	864, 1090, 1419
RseI	CAYNNNNRTG	3 cut(s)	611, 707, 718
SacI	GAGCTC	1 cut(s)	36
SalI	GTCGAC	1 cut(s)	649
SapI	GCTCTTC	2 cut(s)	14, 838
SaqAI	TTAA	5 cut(s)	266, 444, 488, 513, 1657
SatI	GCNGC	3 cut(s)	69, 569, 1212
Sau3AI	GATC	5 cut(s)	75, 580, 628, 1159, 1609
Sau96I	GGNCC	4 cut(s)	781, 1034, 1276, 1631
ScaI	AGTACT	1 cut(s)	865
SchI	GAGTC	5 cut(s)	109, 155, 656, 866, 970
ScrFI	CCNGG	6 cut(s)	61, 62, 237, 1173, 1538, 1635
SduI	GDGCHC	4 cut(s)	9, 36, 440, 1655
SfaNI	GCATC	2 cut(s)	222, 750
SfcI	CTRYAG	2 cut(s)	17, 507
SfuI	TTCGAA	2 cut(s)	303, 666
SinI	GGWCC	3 cut(s)	781, 1034, 1276
SmaI	CCCGGG	1 cut(s)	62
SmiMI	CAYNNNNRTG	3 cut(s)	611, 707, 718
SmlI	CTYRAG	1 cut(s)	139
SmoI	CTYRAG	1 cut(s)	139
SpeI	ACTAGT	1 cut(s)	866
Sse9I	AATT	8 cut(s)	82, 485, 662, 1215, 1291, 1506, 1516, 1532
SseBI	AGGCCT	1 cut(s)	809
SsiI	CCGC	3 cut(s)	345, 1073, 1376
SspI	AATATT	1 cut(s)	921
SspMI	CTAG	5 cut(s)	621, 795, 861, 867, 1188
SstI	GAGCTC	1 cut(s)	36
StuI	AGGCCT	1 cut(s)	809
StyD4I	CCNGG	6 cut(s)	59, 60, 235, 1171, 1536, 1633
StyI	CCWWGG	1 cut(s)	719
TaaI	ACNGT	4 cut(s)	223, 886, 1129, 1574
TaiI	ACGT	2 cut(s)	894, 1269
TaqI	TCGA	7 cut(s)	36, 303, 650, 666, 911, 1108, 1131
TasI	AATT	8 cut(s)	82, 485, 662, 1215, 1291, 1506, 1516, 1532
TatI	WGTACW	1 cut(s)	863
TfiI	GAWTC	5 cut(s)	768, 1061, 1078, 1481, 1500
Tru1I	TTAA	5 cut(s)	266, 444, 488, 513, 1657
Tru9I	TTAA	5 cut(s)	266, 444, 488, 513, 1657
TseFI	GTSAC	2 cut(s)	709, 869
TseI	GCWGC	3 cut(s)	68, 568, 1211
Tsp45I	GTSAC	2 cut(s)	709, 869
TspDTI	ATGAA	1 cut(s)	1499
TspGWI	ACGGA	1 cut(s)	1107
TspMI	CCCGGG	1 cut(s)	60
Tth111I	GACNNNGTC	1 cut(s)	646
VpaK11BI	GGWCC	3 cut(s)	781, 1034, 1276
XagI	CCTNNNNNAGG	1 cut(s)	814
XapI	RAATTY	4 cut(s)	82, 662, 1506, 1532
XceI	RCATGY	1 cut(s)	451
XmaI	CCCGGG	1 cut(s)	60
XmiI	GTMKAC	2 cut(s)	650, 1263
XspI	CTAG	5 cut(s)	621, 795, 861, 867, 1188
ZrmI	AGTACT	1 cut(s)	865

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.