Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002837

Physical Location & Seq

Genomic Coordinates Reverse (-)

37289890 .. 37291959

Gene Structure 2070 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G437900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 702 bp

ATGGGGAAAATGGTGATGGCCAAGTCCAAGCTGTCCTACGAGGAGTCTCGTAGGCAGAGATTGGAGGAAAACAAGAAGAGAATGGAAGCACTGAATCTGCCTCAGCTTGCTCAGGCTCTTAAAACCACATCTTCTCCCAAACCCTCCCCTATGAAGCGGACGAAGCCTCGTACCGTAGAGAAGCAGATGGTTGTGGTGAGGAGGTCCTCTCGCGTCGCAAACCTGCCTACCCCTGTTTACAAAGAAGTTGTTGTTGATCGAGTGATGATACCCAGAAAGTCCTACTCTAGTAGGCACAGGGATTTGTCGAACCGGGTATATGCTTCGGATGAAGCCAGAGCTGAAGCCATGGAGAGAGCTGAGAATTTAGAGTCTGGTCTGGGATCTGATCACCCGATCTTTGTAAAAACAATGCTCCCATCTCATGTTTCTGGTGGATTCTGGCTGGGTCTTCAAGTCCAGTTCTGCAAGGAGCACCTCCCAAAGGGTGATGAAGTTATGACATTGATAGATGAAGATGGCAACGAGTACCCGACTATATACTTGGCCCGGAAGACAGGACTCAGTGGTGGATGGAAGGGATTTGCAGTTGCTCATGATTTGGTTGATGGGGATGCATTGGTTTTTCAGTTGATTCGCCGTACAGTATTCAAGGTGTACATTTTAAGGGTGGGAAGGCCTGAAGATGGCAACAAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

234

Amino Acids

26.43

Weight (kDa)

9.8

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002837)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42700 AT5G42700
fragaria_vesca	FvH4_2g34580 FvH4_2g34580 FvH4_2g34580 FvH4_2g34580 FvH4_2g34591 FvH4_2g34591
malus_domestica	MD08G1102800.v1.1 MD08G1102900.v1.1 MD15G1084300.v1.1 MD15G1084400.v1.1
prunus_persica	Prupe.1G437900_v2.0.a1 Prupe.1G438000_v2.0.a1
pyrus_communis	pycom08g08430 pycom15g07970
rosa_chinensis	RchiOBHm_Chr6g0307571 RchiOBHm_Chr6g0307581 RchiOBHm_Chr6g0307721 RchiOBHm_Chr6g0307731
rosa_laevigata	RLG00000010704 RLG00000010705
rosa_multiflora	Rmu_sc0022525.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160930 Rroxscaffold_7G00160940
rosa_rugosa	Rorug06G0359900 Rorug06G0360000 Rorug06G0360000 Rorug06G0360000
rosa_samantha	Rh6AG469300 Rh6AG469400 Rh6BG479900 Rh6BG480000 Rh6CG485500 Rh6CG485700 Rh6DG472100 Rh6DG472200
rosa_wichuraiana	Rw6G040980 Rw6G040990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	231
AccII	CGCG	1 cut(s)	213
AciI	CCGC	1 cut(s)	157
AclWI	GGATC	1 cut(s)	391
AcoI	YGGCCR	1 cut(s)	18
AcsI	RAATTY	1 cut(s)	364
AcuI	CTGAAG	2 cut(s)	363, 702
AfaI	GTAC	4 cut(s)	172, 530, 643, 659
AfiI	CCNNNNNNNGG	2 cut(s)	484, 686
AgsI	TTSAA	2 cut(s)	455, 652
AluBI	AGCT	5 cut(s)	31, 106, 341, 359, 697
AluI	AGCT	5 cut(s)	31, 106, 341, 359, 697
Alw21I	GWGCWC	1 cut(s)	477
Alw26I	GTCTC	1 cut(s)	51
AlwI	GGATC	1 cut(s)	391
AoxI	GGCC	3 cut(s)	18, 546, 677
ApoI	RAATTY	1 cut(s)	364
AspS9I	GGNCC	2 cut(s)	204, 547
AsuC2I	CCSGG	2 cut(s)	314, 550
AsuHPI	GGTGA	4 cut(s)	25, 208, 383, 500
AvaII	GGWCC	1 cut(s)	204
BalI	TGGCCA	1 cut(s)	20
BbsI	GAAGAC	2 cut(s)	443, 560
Bbv12I	GWGCWC	1 cut(s)	477
BbvCI	CCTCAGC	1 cut(s)	102
BccI	CCATC	7 cut(s)	10, 181, 427, 512, 567, 602, 680
BceAI	ACGGC	1 cut(s)	624
BclI	TGATCA	1 cut(s)	388
BcnI	CCSGG	2 cut(s)	314, 550
BcoDI	GTCTC	1 cut(s)	51
BfaI	CTAG	1 cut(s)	288
BfuAI	ACCTGC	1 cut(s)	231
Bme1390I	CCNGG	2 cut(s)	314, 550
Bme18I	GGWCC	1 cut(s)	204
BmgT120I	GGNCC	2 cut(s)	204, 547
BmrFI	CCNGG	2 cut(s)	314, 550
BmsI	GCATC	1 cut(s)	604
BpiI	GAAGAC	2 cut(s)	443, 560
BplI	GAGNNNNNCTC	2 cut(s)	193, 225
Bpu10I	CCTNAGC	2 cut(s)	102, 111
BpuMI	CCSGG	2 cut(s)	314, 550
BsaJI	CCNNGG	1 cut(s)	348
BsaXI	ACNNNNNCTCC	2 cut(s)	118, 148
Bsc4I	CCNNNNNNNGG	2 cut(s)	484, 686
Bse1I	ACTGG	1 cut(s)	460
BseDI	CCNNGG	1 cut(s)	348
BseGI	GGATG	3 cut(s)	334, 578, 619
BseLI	CCNNNNNNNGG	2 cut(s)	484, 686
BseMII	CTCAG	4 cut(s)	116, 125, 351, 577
BseNI	ACTGG	1 cut(s)	460
BseRI	GAGGAG	2 cut(s)	56, 214
BseYI	CCCAGC	1 cut(s)	445
Bsh1236I	CGCG	1 cut(s)	213
BshFI	GGCC	3 cut(s)	20, 548, 679
BsiHKAI	GWGCWC	1 cut(s)	477
BsiSI	CCGG	2 cut(s)	313, 550
BslI	CCNNNNNNNGG	2 cut(s)	484, 686
BsmAI	GTCTC	1 cut(s)	51
BsnI	GGCC	3 cut(s)	20, 548, 679
Bsp1286I	GDGCHC	1 cut(s)	477
Bsp1407I	TGTACA	1 cut(s)	657
Bsp143I	GATC	4 cut(s)	256, 383, 388, 396
Bsp19I	CCATGG	1 cut(s)	348
BspACI	CCGC	1 cut(s)	157
BspANI	GGCC	3 cut(s)	20, 548, 679
BspCNI	CTCAG	4 cut(s)	115, 124, 352, 576
BspFNI	CGCG	1 cut(s)	213
BspHI	TCATGA	1 cut(s)	595
BspMI	ACCTGC	1 cut(s)	231
BspPI	GGATC	1 cut(s)	391
BsrGI	TGTACA	1 cut(s)	657
BsrI	ACTGG	1 cut(s)	460
BssECI	CCNNGG	1 cut(s)	348
BssMI	GATC	4 cut(s)	256, 383, 388, 396
BssT1I	CCWWGG	1 cut(s)	348
Bst4CI	ACNGT	2 cut(s)	175, 646
Bst6I	CTCTTC	1 cut(s)	71
BstAUI	TGTACA	1 cut(s)	657
BstC8I	GCNNGC	1 cut(s)	108
BstDEI	CTNAG	4 cut(s)	102, 111, 360, 563
BstDSI	CCRYGG	1 cut(s)	348
BstENI	CCTNNNNNAGG	1 cut(s)	482
BstF5I	GGATG	3 cut(s)	334, 578, 619
BstFNI	CGCG	1 cut(s)	213
BstKTI	GATC	4 cut(s)	259, 386, 391, 399
BstMAI	GTCTC	1 cut(s)	51
BstMBI	GATC	4 cut(s)	256, 383, 388, 396
BstMWI	GCNNNNNNNGC	1 cut(s)	163
BstSCI	CCNGG	2 cut(s)	312, 548
BstUI	CGCG	1 cut(s)	213
BstV2I	GAAGAC	2 cut(s)	443, 560
BstX2I	RGATCY	1 cut(s)	383
BstYI	RGATCY	1 cut(s)	383
BsuRI	GGCC	3 cut(s)	20, 548, 679
BtgI	CCRYGG	1 cut(s)	348
BtsCI	GGATG	3 cut(s)	334, 578, 619
BtsIMutI	CAGTG	2 cut(s)	89, 571
BveI	ACCTGC	1 cut(s)	231
Cac8I	GCNNGC	1 cut(s)	108
CciI	TCATGA	1 cut(s)	595
Cfr13I	GGNCC	2 cut(s)	204, 547
CseI	GACGC	1 cut(s)	202
Csp6I	GTAC	4 cut(s)	171, 529, 642, 658
CviAII	CATG	3 cut(s)	349, 425, 596
CviQI	GTAC	4 cut(s)	171, 529, 642, 658
DdeI	CTNAG	4 cut(s)	102, 111, 360, 563
DpnI	GATC	4 cut(s)	258, 385, 390, 398
DpnII	GATC	4 cut(s)	256, 383, 388, 396
EaeI	YGGCCR	1 cut(s)	18
Eam1104I	CTCTTC	1 cut(s)	71
EarI	CTCTTC	1 cut(s)	71
Eco130I	CCWWGG	1 cut(s)	348
Eco147I	AGGCCT	1 cut(s)	679
Eco47I	GGWCC	1 cut(s)	204
Eco57I	CTGAAG	2 cut(s)	363, 702
EcoNI	CCTNNNNNAGG	1 cut(s)	482
EcoO109I	RGGNCCY	1 cut(s)	204
EcoT14I	CCWWGG	1 cut(s)	348
EcoT22I	ATGCAT	1 cut(s)	619
ErhI	CCWWGG	1 cut(s)	348
FaeI	CATG	3 cut(s)	352, 428, 599
FaiI	YATR	9 cut(s)	152, 319, 321, 350, 426, 500, 539, 541, 597
FatI	CATG	3 cut(s)	348, 424, 595
FbaI	TGATCA	1 cut(s)	388
FokI	GGATG	3 cut(s)	341, 585, 626
FspBI	CTAG	1 cut(s)	288
GsaI	CCCAGC	1 cut(s)	449
HaeIII	GGCC	3 cut(s)	20, 548, 679
HapII	CCGG	2 cut(s)	313, 550
HgaI	GACGC	1 cut(s)	202
Hin1II	CATG	3 cut(s)	352, 428, 599
HindIII	AAGCTT	1 cut(s)	695
HinfI	GANTC	6 cut(s)	44, 94, 371, 438, 561, 634
HpaII	CCGG	2 cut(s)	313, 550
HphI	GGTGA	4 cut(s)	25, 208, 383, 500
Hpy166II	GTNNAC	2 cut(s)	238, 658
Hpy188I	TCNGA	2 cut(s)	328, 388
Hpy188III	TCNNGA	1 cut(s)	596
Hpy8I	GTNNAC	2 cut(s)	238, 658
Hpy99I	CGWCG	1 cut(s)	218
HpyAV	CCTTC	2 cut(s)	571, 669
HpyCH4III	ACNGT	2 cut(s)	175, 646
HpyCH4V	TGCA	3 cut(s)	468, 587, 617
HpyF10VI	GCNNNNNNNGC	1 cut(s)	163
HpyF3I	CTNAG	4 cut(s)	102, 111, 360, 563
Hsp92II	CATG	3 cut(s)	352, 428, 599
Ksp22I	TGATCA	1 cut(s)	388
Kzo9I	GATC	4 cut(s)	256, 383, 388, 396
LmnI	GCTCC	2 cut(s)	420, 472
LweI	GCATC	1 cut(s)	604
MaeI	CTAG	1 cut(s)	288
MalI	GATC	4 cut(s)	258, 385, 390, 398
MboI	GATC	4 cut(s)	256, 383, 388, 396
MboII	GAAGA	6 cut(s)	88, 123, 443, 527, 565, 695
MflI	RGATCY	1 cut(s)	383
MhlI	GDGCHC	1 cut(s)	477
MlsI	TGGCCA	1 cut(s)	20
MluCI	AATT	1 cut(s)	364
MluNI	TGGCCA	1 cut(s)	20
MlyI	GAGTC	3 cut(s)	53, 380, 555
MnlI	CCTC	9 cut(s)	34, 58, 111, 154, 177, 192, 195, 217, 488
Mox20I	TGGCCA	1 cut(s)	20
Mph1103I	ATGCAT	1 cut(s)	619
MscI	TGGCCA	1 cut(s)	20
MseI	TTAA	3 cut(s)	120, 665, 700
Msp20I	TGGCCA	1 cut(s)	20
MspI	CCGG	2 cut(s)	313, 550
MspR9I	CCNGG	2 cut(s)	314, 550
MvnI	CGCG	1 cut(s)	213
MwoI	GCNNNNNNNGC	1 cut(s)	163
NciI	CCSGG	2 cut(s)	314, 550
NcoI	CCATGG	1 cut(s)	348
NdeII	GATC	4 cut(s)	256, 383, 388, 396
NlaIII	CATG	3 cut(s)	352, 428, 599
NsiI	ATGCAT	1 cut(s)	619
PagI	TCATGA	1 cut(s)	595
PceI	AGGCCT	1 cut(s)	679
PfeI	GAWTC	3 cut(s)	94, 438, 634
PleI	GAGTC	3 cut(s)	52, 379, 555
PpsI	GAGTC	3 cut(s)	52, 379, 555
PpuMI	RGGWCCY	1 cut(s)	204
Psp5II	RGGWCCY	1 cut(s)	204
PspFI	CCCAGC	1 cut(s)	445
PspPI	GGNCC	2 cut(s)	204, 547
PspPPI	RGGWCCY	1 cut(s)	204
PsuI	RGATCY	1 cut(s)	383
RsaI	GTAC	4 cut(s)	172, 530, 643, 659
RsaNI	GTAC	4 cut(s)	171, 529, 642, 658
SaqAI	TTAA	3 cut(s)	120, 665, 700
Sau3AI	GATC	4 cut(s)	256, 383, 388, 396
Sau96I	GGNCC	2 cut(s)	204, 547
SchI	GAGTC	3 cut(s)	53, 380, 555
ScrFI	CCNGG	2 cut(s)	314, 550
SduI	GDGCHC	1 cut(s)	477
SetI	ASST	9 cut(s)	33, 108, 206, 225, 343, 361, 480, 657, 699
SfaNI	GCATC	1 cut(s)	604
SinI	GGWCC	1 cut(s)	204
Sse9I	AATT	1 cut(s)	364
SseBI	AGGCCT	1 cut(s)	679
SsiI	CCGC	1 cut(s)	157
SspMI	CTAG	1 cut(s)	288
StuI	AGGCCT	1 cut(s)	679
StyD4I	CCNGG	2 cut(s)	312, 548
StyI	CCWWGG	1 cut(s)	348
TaaI	ACNGT	2 cut(s)	175, 646
TaqI	TCGA	2 cut(s)	259, 308
TasI	AATT	1 cut(s)	364
TatI	WGTACW	1 cut(s)	657
TfiI	GAWTC	3 cut(s)	94, 438, 634
Tru1I	TTAA	3 cut(s)	120, 665, 700
Tru9I	TTAA	3 cut(s)	120, 665, 700
TscAI	CASTG	2 cut(s)	96, 571
TspDTI	ATGAA	4 cut(s)	167, 345, 507, 528
TspRI	CASTG	2 cut(s)	96, 571
VpaK11BI	GGWCC	1 cut(s)	204
XagI	CCTNNNNNAGG	1 cut(s)	482
XapI	RAATTY	1 cut(s)	364
XspI	CTAG	1 cut(s)	288
Zsp2I	ATGCAT	1 cut(s)	619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.