Prupe.1G478800_v2.0.a1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
40054498 .. 40058119
3622 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G478800.1

Sequence Viewer

Length: 1170 bp
ATGGGTAGGAAGCAAATTCAACTTTTCGATGATAAAAGTGATGGGTTTTTCTCTGTTTGCAATTTGGGATTTCAATGGAGCCCCCAAGAAGGGGCTTATCATCCTGGAGGCTTATTTGCTAGCGTTAGCCAAGTGGGAATGGGATTTGGTGTCTCAGCAGACCCTCCGAATCCACGCGGGAATGGAGGCGTGAAGCTTCCATATGCCGACCTGTACATGAAGTATGTGGAGGGCATTAAGAATTTTGGGGTTCAGGAAGAGAAGGGAGAGGTGAAGAAGAAGAAAGGTGGTCTTAAATTGAAGGTTAAGATTGCAAACCCTTCACTGAGGAGGTTGATAAGTGGTGCAATAGCTGGGGCGGTGTCACGGACAGCTGTGGCGCCATTAGAGACCATAAGGACGCATTTGATGGTTGGGAGTAGTGGGAATTCTACTACCGAGGTGTTCAACAATATAATGAAGACTGATGGGTGGAAGGGACTGTTTAGGGGAAATCTTGTCAATGTTATTCGGGTTGCACCGAGCAAGGCAATAGAGCTGTTTGCTTATGATACGGTTAATAAGCGCTTGTCACCGAAACCTGGAGAGCAGCCCAAACTTCCAATTCCTGCCTCGTTAATTGCAGGTGCCTGTGCTGGAGTAAGCTCGACAATTTGCACATACCCCCTGGAGTTACTGAAGACCCGGTTAACCATTCAGAGGGGCGTTTATGATGGCCTTCTTGATGCATTCTTAAAAATAGTGCGAGAAGAGGGACCTGCAGAACTCTACAGAGGTCTTGCCCCTAGTCTTATTGGAGTAATTCCATATGCTGCCACCAATTACTTTGCTTATGACACATTGCGGAAAGCGTATCGCAAGTTTCTCAAGCAGGAGAATATTGGCAACATTGAAACCCTTTTAATTGGATCAGCAGCCGGTGCTATTTCAAGTACTGCAACTTTCCCACTCGAGGTGGCACGCAAACATATGCAGGTGGGAGCCCTGGGTGGAAGGCAGTATACGAATATGCTTCACGCCCTCGCAAGCATACTTGAACACGAAGGGGTTCAGGGTTTATACAGAGGGCTAGGGCCTAGCTGCATGAAGTTGGTGCCTGCAGCAGGGATTTCTTTTATGTGCTATGAAGCATGCAAGAGGATACTGGTAGAGGACAAAGAGGAAGCGTAG

Protein Analysis

390

Amino Acids

42.01

Weight (kDa)

9.4

Isoelectric Point (pI)

38.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 614, 964
Acc36I ACCTGC 3 cut(s) 614, 766, 964
AccB1I GGYRCC 3 cut(s) 379, 626, 1093
AccI GTMKAC 1 cut(s) 1001
AccII CGCG 1 cut(s) 177
AciI CCGC 3 cut(s) 177, 359, 844
AclWI GGATC 1 cut(s) 916
AcsI RAATTY 3 cut(s) 15, 241, 427
AcuI CTGAAG 1 cut(s) 698
AcyI GRCGYC 1 cut(s) 380
AfaI GTAC 2 cut(s) 215, 934
AfeI AGCGCT 1 cut(s) 566
AfiI CCNNNNNNNGG 7 cut(s) 89, 90, 91, 581, 699, 952, 1103
AgsI TTSAA 7 cut(s) 20, 74, 301, 448, 893, 930, 1037
AjnI CCWGG 4 cut(s) 103, 580, 666, 984
AluBI AGCT 6 cut(s) 196, 353, 374, 538, 645, 1080
AluI AGCT 6 cut(s) 196, 353, 374, 538, 645, 1080
Alw26I GTCTC 2 cut(s) 157, 383
AlwI GGATC 1 cut(s) 916
Ama87I CYCGRG 1 cut(s) 950
Aor51HI AGCGCT 1 cut(s) 566
AoxI GGCC 2 cut(s) 715, 1073
ApeKI GCWGC 5 cut(s) 589, 812, 914, 1080, 1100
ApoI RAATTY 3 cut(s) 15, 241, 427
Asp700I GAANNNNTTC 1 cut(s) 1047
AspLEI GCGC 2 cut(s) 382, 567
AspS9I GGNCC 2 cut(s) 755, 1073
AsuC2I CCSGG 1 cut(s) 685
AsuHPI GGTGA 2 cut(s) 283, 564
AsuNHI GCTAGC 1 cut(s) 119
AvaI CYCGRG 1 cut(s) 950
AvaII GGWCC 1 cut(s) 755
BanI GGYRCC 3 cut(s) 379, 626, 1093
BanII GRGCYC 2 cut(s) 83, 985
BarI GAAGNNNNNNTAC 2 cut(s) 985, 1017
BbsI GAAGAC 2 cut(s) 467, 686
BbvI GCAGC 5 cut(s) 601, 799, 926, 1067, 1112
BccI CCATC 4 cut(s) 35, 403, 461, 707
BciT130I CCWGG 4 cut(s) 105, 582, 668, 986
BciVI GTATCC 1 cut(s) 1134
BcnI CCSGG 1 cut(s) 685
BcoDI GTCTC 2 cut(s) 157, 383
BfaI CTAG 4 cut(s) 120, 786, 1070, 1077
BfmI CTRYAG 3 cut(s) 759, 769, 1098
BfoI RGCGCY 2 cut(s) 383, 568
BfuAI ACCTGC 3 cut(s) 614, 766, 964
BfuI GTATCC 1 cut(s) 1134
BisI GCNGC 5 cut(s) 590, 813, 915, 1081, 1101
BlsI GCNGC 5 cut(s) 591, 814, 916, 1082, 1102
BmcAI AGTACT 1 cut(s) 934
Bme1390I CCNGG 5 cut(s) 105, 582, 668, 685, 986
Bme18I GGWCC 1 cut(s) 755
BmeT110I CYCGRG 1 cut(s) 950
BmgT120I GGNCC 2 cut(s) 755, 1073
BmiI GGNNCC 6 cut(s) 80, 381, 628, 756, 982, 1095
BmrFI CCNGG 5 cut(s) 105, 582, 668, 685, 986
BmsI GCATC 1 cut(s) 715
BmtI GCTAGC 1 cut(s) 123
BpiI GAAGAC 2 cut(s) 467, 686
BpmI CTGGAG 4 cut(s) 126, 603, 657, 689
BpuEI CTTGAG 1 cut(s) 851
BpuMI CCSGG 1 cut(s) 685
BsaHI GRCGYC 1 cut(s) 380
BsaI GGTCTC 1 cut(s) 383
BsaJI CCNNGG 4 cut(s) 438, 666, 984, 985
Bsc4I CCNNNNNNNGG 7 cut(s) 89, 90, 91, 581, 699, 952, 1103
Bse118I RCCGGY 1 cut(s) 917
Bse1I ACTGG 1 cut(s) 1149
Bse3DI GCAATG 1 cut(s) 839
BseBI CCWGG 4 cut(s) 105, 582, 668, 986
BseDI CCNNGG 4 cut(s) 438, 666, 984, 985
BseGI GGATG 1 cut(s) 100
BseLI CCNNNNNNNGG 7 cut(s) 89, 90, 91, 581, 699, 952, 1103
BseMI GCAATG 1 cut(s) 839
BseMII CTCAG 2 cut(s) 168, 317
BseNI ACTGG 1 cut(s) 1149
BseRI GAGGAG 1 cut(s) 343
BseXI GCAGC 5 cut(s) 601, 799, 926, 1067, 1112
BseYI CCCAGC 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 177
BshFI GGCC 2 cut(s) 717, 1075
BshNI GGYRCC 3 cut(s) 379, 626, 1093
BsiHKCI CYCGRG 1 cut(s) 950
BsiSI CCGG 2 cut(s) 685, 918
BslFI GGGAC 2 cut(s) 492, 768
BslI CCNNNNNNNGG 7 cut(s) 89, 90, 91, 581, 699, 952, 1103
BsmAI GTCTC 2 cut(s) 157, 383
BsmFI GGGAC 2 cut(s) 492, 768
BsmI GAATGC 1 cut(s) 728
BsnI GGCC 2 cut(s) 717, 1075
Bso31I GGTCTC 1 cut(s) 383
BsoBI CYCGRG 1 cut(s) 950
Bsp1286I GDGCHC 2 cut(s) 83, 985
Bsp1407I TGTACA 1 cut(s) 213
Bsp143I GATC 1 cut(s) 908
BspACI CCGC 3 cut(s) 177, 359, 844
BspANI GGCC 2 cut(s) 717, 1075
BspCNI CTCAG 2 cut(s) 167, 318
BspFNI CGCG 1 cut(s) 177
BspLI GGNNCC 6 cut(s) 80, 381, 628, 756, 982, 1095
BspMAI CTGCAG 2 cut(s) 763, 1102
BspMI ACCTGC 3 cut(s) 614, 766, 964
BspOI GCTAGC 1 cut(s) 123
BspPI GGATC 1 cut(s) 916
BspT107I GGYRCC 3 cut(s) 379, 626, 1093
BspTNI GGTCTC 1 cut(s) 383
BsrDI GCAATG 1 cut(s) 839
BsrFI RCCGGY 1 cut(s) 917
BsrGI TGTACA 1 cut(s) 213
BsrI ACTGG 1 cut(s) 1149
BssAI RCCGGY 1 cut(s) 917
BssECI CCNNGG 4 cut(s) 438, 666, 984, 985
BssMI GATC 1 cut(s) 908
BssNAI GTATAC 1 cut(s) 1002
BssNI GRCGYC 1 cut(s) 380
Bst1107I GTATAC 1 cut(s) 1002
Bst2UI CCWGG 4 cut(s) 105, 582, 668, 986
Bst4CI ACNGT 2 cut(s) 483, 556
Bst6I CTCTTC 2 cut(s) 252, 744
BstACI GRCGYC 1 cut(s) 380
BstAPI GCANNNNNTGC 1 cut(s) 920
BstAUI TGTACA 1 cut(s) 213
BstC8I GCNNGC 5 cut(s) 121, 961, 1027, 1098, 1132
BstDEI CTNAG 2 cut(s) 154, 326
BstENI CCTNNNNNAGG 1 cut(s) 1101
BstF5I GGATG 1 cut(s) 100
BstFNI CGCG 1 cut(s) 177
BstH2I RGCGCY 2 cut(s) 383, 568
BstHHI GCGC 2 cut(s) 382, 567
BstKTI GATC 1 cut(s) 911
BstMAI GTCTC 2 cut(s) 157, 383
BstMBI GATC 1 cut(s) 908
BstMWI GCNNNNNNNGC 1 cut(s) 920
BstNI CCWGG 4 cut(s) 105, 582, 668, 986
BstNSI RCATGY 1 cut(s) 1134
BstSCI CCNGG 5 cut(s) 103, 580, 666, 683, 984
BstSFI CTRYAG 3 cut(s) 759, 769, 1098
BstUI CGCG 1 cut(s) 177
BstV1I GCAGC 5 cut(s) 601, 799, 926, 1067, 1112
BstV2I GAAGAC 2 cut(s) 467, 686
BstZ17I GTATAC 1 cut(s) 1002
BsuI GTATCC 1 cut(s) 1134
BsuRI GGCC 2 cut(s) 717, 1075
BtsCI GGATG 1 cut(s) 100
BtsIMutI CAGTG 1 cut(s) 323
BveI ACCTGC 3 cut(s) 614, 766, 964
Cac8I GCNNGC 5 cut(s) 121, 961, 1027, 1098, 1132
CfoI GCGC 2 cut(s) 382, 567
Cfr10I RCCGGY 1 cut(s) 917
Cfr13I GGNCC 2 cut(s) 755, 1073
CseI GACGC 1 cut(s) 409
Csp6I GTAC 2 cut(s) 214, 933
CviAII CATG 3 cut(s) 217, 1084, 1131
CviQI GTAC 2 cut(s) 214, 933
DdeI CTNAG 2 cut(s) 154, 326
DinI GGCGCC 1 cut(s) 381
DpnI GATC 1 cut(s) 910
DpnII GATC 1 cut(s) 908
Eam1104I CTCTTC 2 cut(s) 252, 744
EarI CTCTTC 2 cut(s) 252, 744
Eco24I GRGCYC 2 cut(s) 83, 985
Eco31I GGTCTC 1 cut(s) 383
Eco47I GGWCC 1 cut(s) 755
Eco47III AGCGCT 1 cut(s) 566
Eco57I CTGAAG 1 cut(s) 698
Eco88I CYCGRG 1 cut(s) 950
EcoNI CCTNNNNNAGG 1 cut(s) 1101
EcoO109I RGGNCCY 2 cut(s) 755, 1073
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 4 cut(s) 103, 580, 666, 984
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 2 cut(s) 83, 985
EgeI GGCGCC 1 cut(s) 381
EheI GGCGCC 1 cut(s) 381
FaeI CATG 3 cut(s) 220, 1087, 1134
FalI AAGNNNNNCTT 2 cut(s) 276, 308
FaqI GGGAC 2 cut(s) 492, 768
FatI CATG 3 cut(s) 216, 1083, 1130
FauI CCCGC 1 cut(s) 170
FauNDI CATATG 3 cut(s) 202, 808, 969
FblI GTMKAC 1 cut(s) 1001
Fnu4HI GCNGC 5 cut(s) 590, 813, 915, 1081, 1101
FokI GGATG 1 cut(s) 87
FriOI GRGCYC 2 cut(s) 83, 985
Fsp4HI GCNGC 5 cut(s) 590, 813, 915, 1081, 1101
FspBI CTAG 4 cut(s) 120, 786, 1070, 1077
GlaI GCGC 2 cut(s) 381, 566
GluI GCNGC 5 cut(s) 590, 813, 915, 1081, 1101
GsaI CCCAGC 1 cut(s) 357
GsuI CTGGAG 4 cut(s) 126, 603, 657, 689
HaeII RGCGCY 2 cut(s) 383, 568
HaeIII GGCC 2 cut(s) 717, 1075
HapII CCGG 2 cut(s) 685, 918
HgaI GACGC 1 cut(s) 409
HhaI GCGC 2 cut(s) 382, 567
Hin1I GRCGYC 1 cut(s) 380
Hin1II CATG 3 cut(s) 220, 1087, 1134
Hin6I GCGC 2 cut(s) 380, 565
HinP1I GCGC 2 cut(s) 380, 565
HincII GTYRAC 1 cut(s) 690
HindII GTYRAC 1 cut(s) 690
HindIII AAGCTT 1 cut(s) 194
HinfI GANTC 1 cut(s) 169
HpaI GTTAAC 1 cut(s) 690
HpaII CCGG 2 cut(s) 685, 918
HphI GGTGA 2 cut(s) 283, 564
Hpy166II GTNNAC 2 cut(s) 690, 1002
Hpy188I TCNGA 2 cut(s) 168, 699
Hpy188III TCNNGA 2 cut(s) 254, 722
Hpy8I GTNNAC 2 cut(s) 690, 1002
HpyAV CCTTC 8 cut(s) 83, 256, 295, 330, 469, 728, 987, 1037
HpyCH4III ACNGT 2 cut(s) 483, 556
HpyF10VI GCNNNNNNNGC 1 cut(s) 920
HpyF3I CTNAG 2 cut(s) 154, 326
Hsp92I GRCGYC 1 cut(s) 380
Hsp92II CATG 3 cut(s) 220, 1087, 1134
HspAI GCGC 2 cut(s) 380, 565
KasI GGCGCC 1 cut(s) 379
KspAI GTTAAC 1 cut(s) 690
Kzo9I GATC 1 cut(s) 908
LmnI GCTCC 2 cut(s) 78, 980
Lsp1109I GCAGC 5 cut(s) 601, 799, 926, 1067, 1112
LweI GCATC 1 cut(s) 715
MaeI CTAG 4 cut(s) 120, 786, 1070, 1077
MaeIII GTNAC 3 cut(s) 363, 570, 672
MalI GATC 1 cut(s) 910
MboI GATC 1 cut(s) 908
MboII GAAGA 7 cut(s) 269, 286, 289, 292, 472, 691, 761
MhlI GDGCHC 2 cut(s) 83, 985
Mly113I GGCGCC 1 cut(s) 380
Mph1103I ATGCAT 1 cut(s) 730
MroXI GAANNNNTTC 1 cut(s) 1047
MseI TTAA 8 cut(s) 237, 294, 306, 558, 617, 689, 734, 902
MspA1I CMGCKG 1 cut(s) 374
MspI CCGG 2 cut(s) 685, 918
MspR9I CCNGG 5 cut(s) 105, 582, 668, 685, 986
Mva1269I GAATGC 1 cut(s) 728
MvaI CCWGG 4 cut(s) 105, 582, 668, 986
MvnI CGCG 1 cut(s) 177
MwoI GCNNNNNNNGC 1 cut(s) 920
NarI GGCGCC 1 cut(s) 380
NciI CCSGG 1 cut(s) 685
NdeI CATATG 3 cut(s) 202, 808, 969
NdeII GATC 1 cut(s) 908
NheI GCTAGC 1 cut(s) 119
NlaIII CATG 3 cut(s) 220, 1087, 1134
NlaIV GGNNCC 6 cut(s) 80, 381, 628, 756, 982, 1095
NmuCI GTSAC 2 cut(s) 363, 570
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 1 cut(s) 1134
PaeI GCATGC 1 cut(s) 1134
PaeR7I CTCGAG 1 cut(s) 950
PaqCI CACCTGC 2 cut(s) 614, 964
PasI CCCWGGG 1 cut(s) 985
PctI GAATGC 1 cut(s) 728
PdmI GAANNNNTTC 1 cut(s) 1047
PfeI GAWTC 1 cut(s) 169
PfoI TCCNGGA 1 cut(s) 103
PkrI GCNGC 5 cut(s) 591, 814, 916, 1082, 1102
PluTI GGCGCC 1 cut(s) 383
PpuMI RGGWCCY 1 cut(s) 755
Psp5II RGGWCCY 1 cut(s) 755
Psp6I CCWGG 4 cut(s) 103, 580, 666, 984
PspFI CCCAGC 1 cut(s) 353
PspGI CCWGG 4 cut(s) 103, 580, 666, 984
PspN4I GGNNCC 6 cut(s) 80, 381, 628, 756, 982, 1095
PspPI GGNCC 2 cut(s) 755, 1073
PspPPI RGGWCCY 1 cut(s) 755
PspXI VCTCGAGB 1 cut(s) 950
PstI CTGCAG 2 cut(s) 763, 1102
PvuII CAGCTG 1 cut(s) 374
RsaI GTAC 2 cut(s) 215, 934
RsaNI GTAC 2 cut(s) 214, 933
SaqAI TTAA 8 cut(s) 237, 294, 306, 558, 617, 689, 734, 902
SatI GCNGC 5 cut(s) 590, 813, 915, 1081, 1101
Sau3AI GATC 1 cut(s) 908
Sau96I GGNCC 2 cut(s) 755, 1073
ScaI AGTACT 1 cut(s) 934
ScrFI CCNGG 5 cut(s) 105, 582, 668, 685, 986
SduI GDGCHC 2 cut(s) 83, 985
SfaNI GCATC 1 cut(s) 715
SfcI CTRYAG 3 cut(s) 759, 769, 1098
SfoI GGCGCC 1 cut(s) 381
Sfr274I CTCGAG 1 cut(s) 950
SinI GGWCC 1 cut(s) 755
SlaI CTCGAG 1 cut(s) 950
SmlI CTYRAG 2 cut(s) 866, 950
SmoI CTYRAG 2 cut(s) 866, 950
SphI GCATGC 1 cut(s) 1134
SsiI CCGC 3 cut(s) 177, 359, 844
SspDI GGCGCC 1 cut(s) 379
SspI AATATT 1 cut(s) 880
SspMI CTAG 4 cut(s) 120, 786, 1070, 1077
StyD4I CCNGG 5 cut(s) 103, 580, 666, 683, 984
TaaI ACNGT 2 cut(s) 483, 556
TaqI TCGA 3 cut(s) 27, 647, 951
TatI WGTACW 2 cut(s) 213, 932
TfiI GAWTC 1 cut(s) 169
Tru1I TTAA 8 cut(s) 237, 294, 306, 558, 617, 689, 734, 902
Tru9I TTAA 8 cut(s) 237, 294, 306, 558, 617, 689, 734, 902
TscAI CASTG 1 cut(s) 330
TseFI GTSAC 2 cut(s) 363, 570
TseI GCWGC 5 cut(s) 589, 812, 914, 1080, 1100
Tsp45I GTSAC 2 cut(s) 363, 570
TspDTI ATGAA 4 cut(s) 233, 473, 1100, 1140
TspGWI ACGGA 1 cut(s) 382
TspRI CASTG 1 cut(s) 330
VpaK11BI GGWCC 1 cut(s) 755
XagI CCTNNNNNAGG 1 cut(s) 1101
XapI RAATTY 3 cut(s) 15, 241, 427
XceI RCATGY 1 cut(s) 1134
XhoI CTCGAG 1 cut(s) 950
XmiI GTMKAC 1 cut(s) 1001
XmnI GAANNNNTTC 1 cut(s) 1047
XspI CTAG 4 cut(s) 120, 786, 1070, 1077
ZrmI AGTACT 1 cut(s) 934
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.