pycom15g11120

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
7493490 .. 7495772
2283 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g11120.1

Sequence Viewer

Length: 1182 bp
ATGGGGAGGAAGCAATTCCAAGTTTTCGATGACAAGAGTGATGGGTTTCTCTCTGTTTGCAATTTGGGAAATTTGGGATTTCAATGGAGTCCCGAAGAGGAGGGTTACCATCCCGGAGGCTTATTTGCAAGCGTTAGCCAAGTGGGGATGGGCTTCGGGGTCTCGCCGGACCCTCCCAATCCACGCCGTGATGGCGGGGCCGTGAAGCTTCCGTATGCCGAGCAGTACATGAAGTATGTGGAGGGGATTAAGAATTTTGGGGTGGGGGAAGAGAAGGGGGTGGTGAAGAATAAGAAGGGCGGTCTGAAATTGAAGGTTAAGATTGCTAACCCTTCAGTGAGAAGGCTAATAAGTGGTGCAATAGCCGGGGCAATTTCACGGACGGCTGTGGCACCATTGGAGACGATAAGGACTCATTTGATGGTTGGGAGTTGTGGGAGATCTACTACTGACGTCTTCAATGATATAATGAAGATTGATGGTTGGAAGGGGTTGTTTAGGGGAAATCTAGTCAATGTGATTCGGGTTGCACCGAGCAAGGCGATAGAGCTGTTTGCTTATGATACGGTTAACAAACAACTGTCACCAAAACCTGGAGAGCAGCCCAAACTTCCAATTCCTGCCTCGTTAATTGCAGGTGCTTGTGCTGGAGTGAGTTCAACAATTTGCACATACCCTCTTGAGTTAATTAAGACTCGGCTAACCATTCAGAGAGACGCTTATGATGGCCTTCTGGATGCATTCTTAAAAATAGCGCGAGAAGAGGGACCGGCAGAGCTCTACAGAGGTCTTGCCCCTAGTCTTATTGGAGTAATTCCATATGCTGCCGCCAATTACTATGCTTATGATACATTACGGAAAGCCTATCGCAAGTTTCTCAAGCAGGAGAAGATCGGCAACATTGAAACCCTTTTAATTGGATCAGCAGCTGGTGCTATTTCAAGTACTGCAACATTCCCACTCGAGGTGGCACGCAAGCACATGCAGGCGGGAGCCGTGAGTGGAATCCAATATAGAAATGTGCTTCACGCCCTCACCAGTATACTTGAGAAGAAGGGGGTTGAGGGTTTATACACTGGGCTAGGCCCGAGCTGCATGAAGTTGGTGCCTGCGGCAGGGATTTCTTTTATGTGCTACGAAGCATGCAAGCGGATACTGGTAGAGGAAAAAGAGGAAGAGTAG

Protein Analysis

394

Amino Acids

42.49

Weight (kDa)

9.16

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 111 - 195 8.9e-21 Mitochondrial carrier protein
Mito_carr PF00153 204 - 291 8e-25 Mitochondrial carrier protein
Mito_carr PF00153 300 - 389 1.6e-22 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 626
AatII GACGTC 1 cut(s) 456
Acc36I ACCTGC 1 cut(s) 626
AccB1I GGYRCC 2 cut(s) 391, 1105
AccB7I CCANNNNNTGG 1 cut(s) 593
AccI GTMKAC 1 cut(s) 1042
AccII CGCG 1 cut(s) 757
AciI CCGC 6 cut(s) 195, 300, 828, 989, 1112, 1150
AclWI GGATC 1 cut(s) 928
AcsI RAATTY 2 cut(s) 70, 253
AcuI CTGAAG 1 cut(s) 318
AcyI GRCGYC 1 cut(s) 453
AdeI CACNNNGTG 1 cut(s) 188
AfaI GTAC 2 cut(s) 227, 946
AfiI CCNNNNNNNGG 3 cut(s) 593, 964, 1115
AgsI TTSAA 6 cut(s) 83, 313, 460, 660, 905, 942
AjnI CCWGG 1 cut(s) 592
AluBI AGCT 5 cut(s) 208, 550, 778, 929, 1092
AluI AGCT 5 cut(s) 208, 550, 778, 929, 1092
Alw21I GWGCWC 1 cut(s) 780
Alw26I GTCTC 3 cut(s) 166, 395, 708
AlwI GGATC 1 cut(s) 928
AlwNI CAGNNNCTG 1 cut(s) 929
Ama87I CYCGRG 2 cut(s) 962, 1087
AoxI GGCC 3 cut(s) 198, 727, 1084
ApeKI GCWGC 4 cut(s) 601, 824, 926, 1092
ApoI RAATTY 2 cut(s) 70, 253
Asp700I GAANNNNTTC 1 cut(s) 14
AspLEI GCGC 1 cut(s) 757
AspS9I GGNCC 4 cut(s) 169, 198, 767, 1085
AsuC2I CCSGG 2 cut(s) 114, 367
AsuHPI GGTGA 3 cut(s) 295, 576, 1027
AvaI CYCGRG 2 cut(s) 962, 1087
AvaII GGWCC 2 cut(s) 169, 767
BanI GGYRCC 2 cut(s) 391, 1105
BanII GRGCYC 1 cut(s) 780
BbsI GAAGAC 1 cut(s) 448
Bbv12I GWGCWC 1 cut(s) 780
BbvI GCAGC 4 cut(s) 613, 811, 938, 1079
BccI CCATC 7 cut(s) 35, 117, 142, 185, 415, 473, 719
BceAI ACGGC 4 cut(s) 171, 185, 399, 980
BciT130I CCWGG 1 cut(s) 594
BciVI GTATCC 1 cut(s) 1146
BcnI CCSGG 2 cut(s) 114, 367
BcoDI GTCTC 3 cut(s) 166, 395, 708
BfaI CTAG 3 cut(s) 509, 798, 1082
BfmI CTRYAG 1 cut(s) 781
BfuAI ACCTGC 1 cut(s) 626
BfuI GTATCC 1 cut(s) 1146
BglI GCCNNNNNGGC 1 cut(s) 192
BglII AGATCT 1 cut(s) 440
BisI GCNGC 6 cut(s) 602, 825, 828, 927, 1093, 1113
BlsI GCNGC 6 cut(s) 603, 826, 829, 928, 1094, 1114
BmcAI AGTACT 1 cut(s) 946
Bme1390I CCNGG 3 cut(s) 114, 367, 594
Bme18I GGWCC 2 cut(s) 169, 767
BmeT110I CYCGRG 2 cut(s) 962, 1087
BmgT120I GGNCC 4 cut(s) 169, 198, 767, 1085
BmiI GGNNCC 6 cut(s) 171, 199, 393, 768, 994, 1107
BmrFI CCNGG 3 cut(s) 114, 367, 594
BmrI ACTGGG 1 cut(s) 1086
BmsI GCATC 1 cut(s) 727
BmuI ACTGGG 1 cut(s) 1086
BpiI GAAGAC 1 cut(s) 448
BpmI CTGGAG 2 cut(s) 615, 669
BpuEI CTTGAG 3 cut(s) 701, 863, 1067
BpuMI CCSGG 2 cut(s) 114, 367
BsaHI GRCGYC 1 cut(s) 453
BsaI GGTCTC 1 cut(s) 166
BsaJI CCNNGG 1 cut(s) 366
Bsc4I CCNNNNNNNGG 3 cut(s) 593, 964, 1115
Bse118I RCCGGY 1 cut(s) 769
Bse1I ACTGG 3 cut(s) 1038, 1081, 1161
BseBI CCWGG 1 cut(s) 594
BseDI CCNNGG 1 cut(s) 366
BseGI GGATG 3 cut(s) 109, 153, 742
BseLI CCNNNNNNNGG 3 cut(s) 593, 964, 1115
BseNI ACTGG 3 cut(s) 1038, 1081, 1161
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 4 cut(s) 613, 811, 938, 1079
Bsh1236I CGCG 1 cut(s) 757
BshFI GGCC 3 cut(s) 200, 729, 1086
BshNI GGYRCC 2 cut(s) 391, 1105
BsiHKAI GWGCWC 1 cut(s) 780
BsiHKCI CYCGRG 2 cut(s) 962, 1087
BsiSI CCGG 4 cut(s) 114, 167, 366, 770
BslFI GGGAC 2 cut(s) 75, 780
BslI CCNNNNNNNGG 3 cut(s) 593, 964, 1115
BsmAI GTCTC 3 cut(s) 166, 395, 708
BsmBI CGTCTC 2 cut(s) 395, 708
BsmFI GGGAC 2 cut(s) 75, 780
BsmI GAATGC 1 cut(s) 740
BsnI GGCC 3 cut(s) 200, 729, 1086
Bso31I GGTCTC 1 cut(s) 166
BsoBI CYCGRG 2 cut(s) 962, 1087
Bsp1286I GDGCHC 1 cut(s) 780
Bsp143I GATC 3 cut(s) 440, 891, 920
BspACI CCGC 6 cut(s) 195, 300, 828, 989, 1112, 1150
BspANI GGCC 3 cut(s) 200, 729, 1086
BspFNI CGCG 1 cut(s) 757
BspLI GGNNCC 6 cut(s) 171, 199, 393, 768, 994, 1107
BspMI ACCTGC 1 cut(s) 626
BspPI GGATC 1 cut(s) 928
BspT107I GGYRCC 2 cut(s) 391, 1105
BspTNI GGTCTC 1 cut(s) 166
BsrFI RCCGGY 1 cut(s) 769
BsrI ACTGG 3 cut(s) 1038, 1081, 1161
BssAI RCCGGY 1 cut(s) 769
BssECI CCNNGG 1 cut(s) 366
BssMI GATC 3 cut(s) 440, 891, 920
BssNAI GTATAC 1 cut(s) 1043
BssNI GRCGYC 1 cut(s) 453
Bst1107I GTATAC 1 cut(s) 1043
Bst2UI CCWGG 1 cut(s) 594
Bst4CI ACNGT 2 cut(s) 568, 582
Bst6I CTCTTC 4 cut(s) 90, 264, 756, 1170
BstACI GRCGYC 1 cut(s) 453
BstAPI GCANNNNNTGC 1 cut(s) 932
BstC8I GCNNGC 7 cut(s) 130, 973, 977, 987, 1110, 1144, 1148
BstEII GGTNACC 1 cut(s) 104
BstENI CCTNNNNNAGG 1 cut(s) 1113
BstF5I GGATG 3 cut(s) 109, 153, 742
BstFNI CGCG 1 cut(s) 757
BstHHI GCGC 1 cut(s) 757
BstKTI GATC 3 cut(s) 443, 894, 923
BstMAI GTCTC 3 cut(s) 166, 395, 708
BstMBI GATC 3 cut(s) 440, 891, 920
BstMWI GCNNNNNNNGC 3 cut(s) 192, 932, 1092
BstNI CCWGG 1 cut(s) 594
BstNSI RCATGY 2 cut(s) 985, 1146
BstPI GGTNACC 1 cut(s) 104
BstSCI CCNGG 3 cut(s) 112, 365, 592
BstSFI CTRYAG 1 cut(s) 781
BstUI CGCG 1 cut(s) 757
BstV1I GCAGC 4 cut(s) 613, 811, 938, 1079
BstV2I GAAGAC 1 cut(s) 448
BstX2I RGATCY 1 cut(s) 440
BstYI RGATCY 1 cut(s) 440
BstZ17I GTATAC 1 cut(s) 1043
BsuI GTATCC 1 cut(s) 1146
BsuRI GGCC 3 cut(s) 200, 729, 1086
BtsCI GGATG 3 cut(s) 109, 153, 742
BtsIMutI CAGTG 2 cut(s) 342, 1074
BveI ACCTGC 1 cut(s) 626
Cac8I GCNNGC 7 cut(s) 130, 973, 977, 987, 1110, 1144, 1148
CaiI CAGNNNCTG 1 cut(s) 929
CfoI GCGC 1 cut(s) 757
Cfr10I RCCGGY 1 cut(s) 769
Cfr13I GGNCC 4 cut(s) 169, 198, 767, 1085
CseI GACGC 1 cut(s) 725
Csp6I GTAC 2 cut(s) 226, 945
CviAII CATG 4 cut(s) 229, 982, 1096, 1143
CviQI GTAC 2 cut(s) 226, 945
DpnI GATC 3 cut(s) 442, 893, 922
DpnII GATC 3 cut(s) 440, 891, 920
DraIII CACNNNGTG 1 cut(s) 188
Eam1104I CTCTTC 4 cut(s) 90, 264, 756, 1170
EarI CTCTTC 4 cut(s) 90, 264, 756, 1170
Ecl136II GAGCTC 1 cut(s) 778
Eco24I GRGCYC 1 cut(s) 780
Eco31I GGTCTC 1 cut(s) 166
Eco47I GGWCC 2 cut(s) 169, 767
Eco53kI GAGCTC 1 cut(s) 778
Eco57I CTGAAG 1 cut(s) 318
Eco88I CYCGRG 2 cut(s) 962, 1087
Eco91I GGTNACC 1 cut(s) 104
EcoICRI GAGCTC 1 cut(s) 778
EcoNI CCTNNNNNAGG 1 cut(s) 1113
EcoO65I GGTNACC 1 cut(s) 104
EcoRII CCWGG 1 cut(s) 592
EcoT22I ATGCAT 1 cut(s) 742
EcoT38I GRGCYC 1 cut(s) 780
Esp3I CGTCTC 2 cut(s) 395, 708
FaeI CATG 4 cut(s) 232, 985, 1099, 1146
FaqI GGGAC 2 cut(s) 75, 780
FatI CATG 4 cut(s) 228, 981, 1095, 1142
FauI CCCGC 2 cut(s) 188, 982
FauNDI CATATG 1 cut(s) 820
FblI GTMKAC 1 cut(s) 1042
Fnu4HI GCNGC 6 cut(s) 602, 825, 828, 927, 1093, 1113
FokI GGATG 3 cut(s) 96, 160, 749
FriOI GRGCYC 1 cut(s) 780
Fsp4HI GCNGC 6 cut(s) 602, 825, 828, 927, 1093, 1113
FspBI CTAG 3 cut(s) 509, 798, 1082
GlaI GCGC 1 cut(s) 756
GluI GCNGC 6 cut(s) 602, 825, 828, 927, 1093, 1113
GsuI CTGGAG 2 cut(s) 615, 669
HaeIII GGCC 3 cut(s) 200, 729, 1086
HapII CCGG 4 cut(s) 114, 167, 366, 770
HgaI GACGC 1 cut(s) 725
HhaI GCGC 1 cut(s) 757
Hin1I GRCGYC 1 cut(s) 453
Hin1II CATG 4 cut(s) 232, 985, 1099, 1146
Hin6I GCGC 1 cut(s) 755
HinP1I GCGC 1 cut(s) 755
HincII GTYRAC 1 cut(s) 571
HindII GTYRAC 1 cut(s) 571
HindIII AAGCTT 1 cut(s) 206
HinfI GANTC 5 cut(s) 88, 412, 520, 694, 1005
HpaI GTTAAC 1 cut(s) 571
HpaII CCGG 4 cut(s) 114, 167, 366, 770
HphI GGTGA 3 cut(s) 295, 576, 1027
Hpy166II GTNNAC 2 cut(s) 571, 1043
Hpy188I TCNGA 2 cut(s) 306, 711
Hpy188III TCNNGA 3 cut(s) 92, 680, 734
Hpy8I GTNNAC 2 cut(s) 571, 1043
HpyAV CCTTC 8 cut(s) 268, 289, 307, 336, 342, 481, 740, 1048
HpyCH4III ACNGT 2 cut(s) 568, 582
HpyCH4IV ACGT 1 cut(s) 453
HpyF10VI GCNNNNNNNGC 3 cut(s) 192, 932, 1092
HpySE526I ACGT 1 cut(s) 453
Hsp92I GRCGYC 1 cut(s) 453
Hsp92II CATG 4 cut(s) 232, 985, 1099, 1146
HspAI GCGC 1 cut(s) 755
KspAI GTTAAC 1 cut(s) 571
Kzo9I GATC 3 cut(s) 440, 891, 920
LmnI GCTCC 1 cut(s) 992
Lsp1109I GCAGC 4 cut(s) 613, 811, 938, 1079
LweI GCATC 1 cut(s) 727
MaeI CTAG 3 cut(s) 509, 798, 1082
MaeII ACGT 1 cut(s) 453
MaeIII GTNAC 2 cut(s) 104, 582
MalI GATC 3 cut(s) 442, 893, 922
MboI GATC 3 cut(s) 440, 891, 920
MboII GAAGA 8 cut(s) 107, 281, 298, 448, 484, 773, 901, 1063
MflI RGATCY 1 cut(s) 440
MhlI GDGCHC 1 cut(s) 780
MlyI GAGTC 3 cut(s) 97, 406, 688
MmeI TCCRAC 1 cut(s) 464
Mph1103I ATGCAT 1 cut(s) 742
MroXI GAANNNNTTC 1 cut(s) 14
MseI TTAA 8 cut(s) 249, 318, 570, 629, 686, 690, 746, 914
MspA1I CMGCKG 1 cut(s) 929
MspI CCGG 4 cut(s) 114, 167, 366, 770
MspR9I CCNGG 3 cut(s) 114, 367, 594
Mva1269I GAATGC 1 cut(s) 740
MvaI CCWGG 1 cut(s) 594
MvnI CGCG 1 cut(s) 757
MwoI GCNNNNNNNGC 3 cut(s) 192, 932, 1092
NciI CCSGG 2 cut(s) 114, 367
NdeI CATATG 1 cut(s) 820
NdeII GATC 3 cut(s) 440, 891, 920
NlaIII CATG 4 cut(s) 232, 985, 1099, 1146
NlaIV GGNNCC 6 cut(s) 171, 199, 393, 768, 994, 1107
NmeAIII GCCGAG 2 cut(s) 244, 676
NmuCI GTSAC 1 cut(s) 582
NsiI ATGCAT 1 cut(s) 742
NspI RCATGY 2 cut(s) 985, 1146
PacI TTAATTAA 1 cut(s) 690
PaeI GCATGC 1 cut(s) 1146
PaeR7I CTCGAG 1 cut(s) 962
PaqCI CACCTGC 1 cut(s) 626
PctI GAATGC 1 cut(s) 740
PdmI GAANNNNTTC 1 cut(s) 14
PfeI GAWTC 2 cut(s) 520, 1005
PflMI CCANNNNNTGG 1 cut(s) 593
PfoI TCCNGGA 1 cut(s) 112
PkrI GCNGC 6 cut(s) 603, 826, 829, 928, 1094, 1114
PleI GAGTC 3 cut(s) 96, 406, 688
PpsI GAGTC 3 cut(s) 96, 406, 688
Psp124BI GAGCTC 1 cut(s) 780
Psp6I CCWGG 1 cut(s) 592
PspEI GGTNACC 1 cut(s) 104
PspGI CCWGG 1 cut(s) 592
PspN4I GGNNCC 6 cut(s) 171, 199, 393, 768, 994, 1107
PspPI GGNCC 4 cut(s) 169, 198, 767, 1085
PspXI VCTCGAGB 1 cut(s) 962
PstNI CAGNNNCTG 1 cut(s) 929
PsuI RGATCY 1 cut(s) 440
PvuII CAGCTG 1 cut(s) 929
RsaI GTAC 2 cut(s) 227, 946
RsaNI GTAC 2 cut(s) 226, 945
SacI GAGCTC 1 cut(s) 780
SaqAI TTAA 8 cut(s) 249, 318, 570, 629, 686, 690, 746, 914
SatI GCNGC 6 cut(s) 602, 825, 828, 927, 1093, 1113
Sau3AI GATC 3 cut(s) 440, 891, 920
Sau96I GGNCC 4 cut(s) 169, 198, 767, 1085
ScaI AGTACT 1 cut(s) 946
SchI GAGTC 3 cut(s) 97, 406, 688
ScrFI CCNGG 3 cut(s) 114, 367, 594
SduI GDGCHC 1 cut(s) 780
SfaNI GCATC 1 cut(s) 727
SfcI CTRYAG 1 cut(s) 781
Sfr274I CTCGAG 1 cut(s) 962
SinI GGWCC 2 cut(s) 169, 767
SlaI CTCGAG 1 cut(s) 962
SmlI CTYRAG 4 cut(s) 680, 878, 962, 1046
SmoI CTYRAG 4 cut(s) 680, 878, 962, 1046
SphI GCATGC 1 cut(s) 1146
SsiI CCGC 6 cut(s) 195, 300, 828, 989, 1112, 1150
SspMI CTAG 3 cut(s) 509, 798, 1082
SstI GAGCTC 1 cut(s) 780
StyD4I CCNGG 3 cut(s) 112, 365, 592
TaaI ACNGT 2 cut(s) 568, 582
TaiI ACGT 1 cut(s) 456
TaqI TCGA 2 cut(s) 27, 963
TatI WGTACW 2 cut(s) 225, 944
TauI GCSGC 2 cut(s) 830, 1115
TfiI GAWTC 2 cut(s) 520, 1005
Tru1I TTAA 8 cut(s) 249, 318, 570, 629, 686, 690, 746, 914
Tru9I TTAA 8 cut(s) 249, 318, 570, 629, 686, 690, 746, 914
TscAI CASTG 2 cut(s) 342, 1081
TseFI GTSAC 1 cut(s) 582
TseI GCWGC 4 cut(s) 601, 824, 926, 1092
Tsp45I GTSAC 1 cut(s) 582
TspDTI ATGAA 3 cut(s) 245, 485, 1112
TspGWI ACGGA 3 cut(s) 201, 394, 871
TspRI CASTG 2 cut(s) 342, 1081
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 2 cut(s) 169, 767
XagI CCTNNNNNAGG 1 cut(s) 1113
XapI RAATTY 2 cut(s) 70, 253
XceI RCATGY 2 cut(s) 985, 1146
XhoI CTCGAG 1 cut(s) 962
XmiI GTMKAC 1 cut(s) 1042
XmnI GAANNNNTTC 1 cut(s) 14
XspI CTAG 3 cut(s) 509, 798, 1082
ZraI GACGTC 1 cut(s) 454
ZrmI AGTACT 1 cut(s) 946
Zsp2I ATGCAT 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.