Prupe.1G508100_v2.0.a1
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
41916341 .. 41920583
4243 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G508100.1

Sequence Viewer

Length: 1131 bp
ATGTTACAAGAGAGAATGAGCTATCCATCAACTCAATTTGCCACCTCAAGACAAATGGGGATATACGAGCCGTTTCGACAGGTTGGTGTGTGGAAAGAAACATTCAGGGGTGATCATAGCTCAAACACAGGTGCTTCTTCAATTCTAGAAGTGGATGCTGGGATAGAAACCAAGATTGGATATGTTTCTCATGAATCCTTGGCACCATCCGGAAATGATCAAGAACCAAACAGATCTTCTGATAAGGTACAGAGGCGCTTAGAACAAAATCGTGAAGCTGCTCGCAAAAGTCGTATGCGGAAAAAGGCTTATGTTCAACAACTAGAAACAAGCCGCTTAAAACTGGCACAACTGGAGCAGGAACTTGAAAGAGCTAGAAAACAGATAAACCGGCGGCTGCCTGATTTGCAGGGTGCCTATGTAGCCAGTTCATTAGGTACAAGTCATATGGGATACAATGGAGCTTTGAATTCAGGGATCACTACATTTGAGATGGAATATGGACATTGGGTTGAAGAACAACACAGACAGAATGTTGAACTCAGAAATGCATTGCAAGATCATGGAACCGATATAGAACTTCTTCGAATACTTGTAGAAAGTGGCTTGAGCCACTACGCTAATCTTTTCCGGATGAAGGCAGATGCTGCAAGGGCTGATGCCTTTTACTTACTGTCTGGCATATGGAGAACATCAGTAGAACGCCATTTTCACTGGATTGGAGGATTTCGCCCATCAGAGCTTCTAAATATTGTGTTGCCACAGCTTCAGCCATTGGATGAACCACAACTTGTGGATTTCTATAACTTGAGGCAATCGTCTCAGCAAGCGGAAGATGCTCTCACGCAGGGAATGGAGAAGCTTCAGCAGAATTTGGCGTTGACCATAGCAGGTGATCAAATCAGTGGAGAAATTTATGGATCTCAGATGGCTACTGCATTGGAGAAGTTGGAAGCACTGGAGACCTTTGTGGGCCAGGCGGATCACCTCCGGCAGCAAACTCTGCAGCAAATGTCTCGAATCCTAACGACTCACCAGGCAGCTCGAGGCTTGCTTGCGCTCGGGGAATACTTTCACCGGCTGCGTGCCCTCAGTTCTCTTTGGACTGCCCATCCTCGTGAACCGACATAG

Protein Analysis

377

Amino Acids

42.78

Weight (kDa)

6.51

Isoelectric Point (pI)

52.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 881
Acc36I ACCTGC 1 cut(s) 881
AccB1I GGYRCC 2 cut(s) 202, 413
AccIII TCCGGA 2 cut(s) 209, 630
AciI CCGC 5 cut(s) 298, 334, 394, 830, 980
AclWI GGATC 3 cut(s) 485, 928, 990
AcsI RAATTY 3 cut(s) 469, 871, 912
AcuI CTGAAG 2 cut(s) 752, 848
AfaI GTAC 2 cut(s) 249, 439
AfiI CCNNNNNNNGG 1 cut(s) 637
AgsI TTSAA 6 cut(s) 141, 317, 368, 469, 515, 539
AjnI CCWGG 2 cut(s) 975, 1035
AjuI GAANNNNNNNTTGG 4 cut(s) 159, 191, 220, 252
AluBI AGCT 9 cut(s) 21, 120, 278, 374, 464, 742, 766, 862, 1043
AluI AGCT 9 cut(s) 21, 120, 278, 374, 464, 742, 766, 862, 1043
Alw26I GTCTC 3 cut(s) 825, 956, 1020
AlwI GGATC 3 cut(s) 485, 928, 990
AlwNI CAGNNNCTG 1 cut(s) 647
Ama87I CYCGRG 2 cut(s) 1044, 1061
Aor13HI TCCGGA 2 cut(s) 209, 630
AoxI GGCC 1 cut(s) 973
ApeKI GCWGC 7 cut(s) 278, 397, 647, 994, 1006, 1040, 1081
ApoI RAATTY 3 cut(s) 469, 871, 912
Asp700I GAANNNNTTC 2 cut(s) 582, 1071
AspLEI GCGC 2 cut(s) 258, 1060
AspS9I GGNCC 1 cut(s) 973
AsuHPI GGTGA 5 cut(s) 122, 905, 977, 1025, 1067
AsuII TTCGAA 1 cut(s) 586
AvaI CYCGRG 2 cut(s) 1044, 1061
BaeGI GKGCMC 1 cut(s) 1090
BanI GGYRCC 2 cut(s) 202, 413
BauI CACGAG 1 cut(s) 1116
BbvI GCAGC 7 cut(s) 265, 384, 634, 1006, 1018, 1052, 1068
BccI CCATC 6 cut(s) 34, 214, 487, 742, 922, 1119
BceAI ACGGC 1 cut(s) 55
BcgI CGANNNNNNTGC 2 cut(s) 998, 1032
BciT130I CCWGG 2 cut(s) 977, 1037
BciVI GTATCC 1 cut(s) 446
BclI TGATCA 3 cut(s) 112, 217, 895
BcoDI GTCTC 3 cut(s) 825, 956, 1020
BfaI CTAG 3 cut(s) 146, 323, 375
BfmI CTRYAG 1 cut(s) 1004
BfoI RGCGCY 1 cut(s) 259
BfuAI ACCTGC 1 cut(s) 881
BfuI GTATCC 1 cut(s) 446
BglII AGATCT 1 cut(s) 233
BisI GCNGC 9 cut(s) 279, 334, 395, 398, 648, 995, 1007, 1041, 1082
BlsI GCNGC 9 cut(s) 280, 335, 396, 399, 649, 996, 1008, 1042, 1083
Bme1390I CCNGG 2 cut(s) 977, 1037
BmeT110I CYCGRG 2 cut(s) 1044, 1061
BmgT120I GGNCC 1 cut(s) 973
BmiI GGNNCC 3 cut(s) 204, 415, 568
BmrFI CCNGG 2 cut(s) 977, 1037
BmsI GCATC 4 cut(s) 145, 634, 649, 826
BpmI CTGGAG 2 cut(s) 374, 980
Bpu14I TTCGAA 1 cut(s) 586
BpuEI CTTGAG 3 cut(s) 31, 628, 829
BsaI GGTCTC 1 cut(s) 956
BsaJI CCNNGG 1 cut(s) 198
BsaWI WCCGGW 2 cut(s) 209, 630
Bsc4I CCNNNNNNNGG 1 cut(s) 637
Bse118I RCCGGY 2 cut(s) 390, 1077
Bse1I ACTGG 5 cut(s) 348, 357, 426, 719, 963
Bse3DI GCAATG 1 cut(s) 551
BseAI TCCGGA 2 cut(s) 209, 630
BseBI CCWGG 2 cut(s) 977, 1037
BseDI CCNNGG 1 cut(s) 198
BseGI GGATG 5 cut(s) 160, 206, 639, 784, 1111
BseLI CCNNNNNNNGG 1 cut(s) 637
BseMI GCAATG 1 cut(s) 551
BseMII CTCAG 4 cut(s) 556, 836, 938, 1105
BseNI ACTGG 5 cut(s) 348, 357, 426, 719, 963
BseSI GKGCMC 1 cut(s) 1090
BseXI GCAGC 7 cut(s) 265, 384, 634, 1006, 1018, 1052, 1068
BseYI CCCAGC 1 cut(s) 158
BshFI GGCC 1 cut(s) 975
BshNI GGYRCC 2 cut(s) 202, 413
BsiHKCI CYCGRG 2 cut(s) 1044, 1061
BsiSI CCGG 5 cut(s) 210, 391, 631, 991, 1078
BslI CCNNNNNNNGG 1 cut(s) 637
BsmAI GTCTC 3 cut(s) 825, 956, 1020
BsmBI CGTCTC 1 cut(s) 825
BsnI GGCC 1 cut(s) 975
Bso31I GGTCTC 1 cut(s) 956
BsoBI CYCGRG 2 cut(s) 1044, 1061
Bsp119I TTCGAA 1 cut(s) 586
Bsp1286I GDGCHC 1 cut(s) 1090
Bsp13I TCCGGA 2 cut(s) 209, 630
Bsp143I GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
BspACI CCGC 5 cut(s) 298, 334, 394, 830, 980
BspANI GGCC 1 cut(s) 975
BspCNI CTCAG 4 cut(s) 555, 835, 937, 1104
BspEI TCCGGA 2 cut(s) 209, 630
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 3 cut(s) 204, 415, 568
BspMAI CTGCAG 1 cut(s) 1008
BspMI ACCTGC 1 cut(s) 881
BspPI GGATC 3 cut(s) 485, 928, 990
BspT104I TTCGAA 1 cut(s) 586
BspT107I GGYRCC 2 cut(s) 202, 413
BspTNI GGTCTC 1 cut(s) 956
BsrDI GCAATG 1 cut(s) 551
BsrFI RCCGGY 2 cut(s) 390, 1077
BsrI ACTGG 5 cut(s) 348, 357, 426, 719, 963
BssAI RCCGGY 2 cut(s) 390, 1077
BssECI CCNNGG 1 cut(s) 198
BssMI GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
BssSI CACGAG 1 cut(s) 1116
BssT1I CCWWGG 1 cut(s) 198
Bst2BI CACGAG 1 cut(s) 1116
Bst2UI CCWGG 2 cut(s) 977, 1037
Bst4CI ACNGT 1 cut(s) 675
BstAPI GCANNNNNTGC 2 cut(s) 647, 1003
BstBI TTCGAA 1 cut(s) 586
BstC8I GCNNGC 5 cut(s) 283, 828, 1052, 1056, 1086
BstDEI CTNAG 5 cut(s) 259, 542, 822, 924, 1091
BstF5I GGATG 5 cut(s) 160, 206, 639, 784, 1111
BstH2I RGCGCY 1 cut(s) 259
BstHHI GCGC 2 cut(s) 258, 1060
BstKTI GATC 8 cut(s) 115, 220, 236, 480, 562, 898, 923, 985
BstMAI GTCTC 3 cut(s) 825, 956, 1020
BstMBI GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
BstMWI GCNNNNNNNGC 6 cut(s) 406, 422, 647, 653, 836, 1003
BstNI CCWGG 2 cut(s) 977, 1037
BstSCI CCNGG 2 cut(s) 975, 1035
BstSFI CTRYAG 1 cut(s) 1004
BstSLI GKGCMC 1 cut(s) 1090
BstV1I GCAGC 7 cut(s) 265, 384, 634, 1006, 1018, 1052, 1068
BstX2I RGATCY 2 cut(s) 233, 920
BstYI RGATCY 2 cut(s) 233, 920
BsuI GTATCC 1 cut(s) 446
BsuRI GGCC 1 cut(s) 975
BtsCI GGATG 5 cut(s) 160, 206, 639, 784, 1111
BtsIMutI CAGTG 3 cut(s) 712, 910, 956
BveI ACCTGC 1 cut(s) 881
Cac8I GCNNGC 5 cut(s) 283, 828, 1052, 1056, 1086
CaiI CAGNNNCTG 1 cut(s) 647
CciI TCATGA 1 cut(s) 190
CfoI GCGC 2 cut(s) 258, 1060
Cfr10I RCCGGY 2 cut(s) 390, 1077
Cfr13I GGNCC 1 cut(s) 973
Csp6I GTAC 2 cut(s) 248, 438
CviAII CATG 2 cut(s) 191, 563
CviQI GTAC 2 cut(s) 248, 438
DdeI CTNAG 5 cut(s) 259, 542, 822, 924, 1091
DpnI GATC 8 cut(s) 114, 219, 235, 479, 561, 897, 922, 984
DpnII GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
EciI GGCGGA 1 cut(s) 995
Eco130I CCWWGG 1 cut(s) 198
Eco31I GGTCTC 1 cut(s) 956
Eco57I CTGAAG 2 cut(s) 752, 848
Eco88I CYCGRG 2 cut(s) 1044, 1061
EcoRI GAATTC 1 cut(s) 469
EcoRII CCWGG 2 cut(s) 975, 1035
EcoT14I CCWWGG 1 cut(s) 198
EcoT22I ATGCAT 1 cut(s) 553
ErhI CCWWGG 1 cut(s) 198
Esp3I CGTCTC 1 cut(s) 825
FaeI CATG 2 cut(s) 194, 566
FatI CATG 2 cut(s) 190, 562
FauNDI CATATG 2 cut(s) 447, 683
FbaI TGATCA 3 cut(s) 112, 217, 895
Fnu4HI GCNGC 9 cut(s) 279, 334, 395, 398, 648, 995, 1007, 1041, 1082
FokI GGATG 5 cut(s) 167, 193, 646, 791, 1098
Fsp4HI GCNGC 9 cut(s) 279, 334, 395, 398, 648, 995, 1007, 1041, 1082
FspBI CTAG 3 cut(s) 146, 323, 375
GlaI GCGC 2 cut(s) 257, 1059
GluI GCNGC 9 cut(s) 279, 334, 395, 398, 648, 995, 1007, 1041, 1082
GsaI CCCAGC 1 cut(s) 162
GsuI CTGGAG 2 cut(s) 374, 980
HaeII RGCGCY 1 cut(s) 259
HaeIII GGCC 1 cut(s) 975
HapII CCGG 5 cut(s) 210, 391, 631, 991, 1078
HhaI GCGC 2 cut(s) 258, 1060
Hin1II CATG 2 cut(s) 194, 566
Hin6I GCGC 2 cut(s) 256, 1058
HinP1I GCGC 2 cut(s) 256, 1058
HincII GTYRAC 1 cut(s) 882
HindII GTYRAC 1 cut(s) 882
HindIII AAGCTT 1 cut(s) 860
HinfI GANTC 3 cut(s) 194, 1020, 1030
HpaII CCGG 5 cut(s) 210, 391, 631, 991, 1078
HphI GGTGA 5 cut(s) 122, 905, 977, 1025, 1067
Hpy166II GTNNAC 2 cut(s) 882, 1121
Hpy188I TCNGA 4 cut(s) 241, 545, 739, 927
Hpy188III TCNNGA 9 cut(s) 48, 146, 191, 210, 221, 272, 631, 1017, 1118
Hpy8I GTNNAC 2 cut(s) 882, 1121
HpyAV CCTTC 1 cut(s) 631
HpyCH4III ACNGT 1 cut(s) 675
HpyCH4V TGCA 6 cut(s) 409, 551, 556, 650, 938, 1006
HpyF10VI GCNNNNNNNGC 6 cut(s) 406, 422, 647, 653, 836, 1003
HpyF3I CTNAG 5 cut(s) 259, 542, 822, 924, 1091
Hsp92II CATG 2 cut(s) 194, 566
HspAI GCGC 2 cut(s) 256, 1058
Kpn2I TCCGGA 2 cut(s) 209, 630
Ksp22I TGATCA 3 cut(s) 112, 217, 895
Kzo9I GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
LmnI GCTCC 2 cut(s) 355, 461
Lsp1109I GCAGC 7 cut(s) 265, 384, 634, 1006, 1018, 1052, 1068
LweI GCATC 4 cut(s) 145, 634, 649, 826
MaeI CTAG 3 cut(s) 146, 323, 375
MaeIII GTNAC 1 cut(s) 3
MalI GATC 8 cut(s) 114, 219, 235, 479, 561, 897, 922, 984
MboI GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
MboII GAAGA 5 cut(s) 129, 228, 527, 575, 845
MflI RGATCY 2 cut(s) 233, 920
MhlI GDGCHC 1 cut(s) 1090
MluCI AATT 5 cut(s) 35, 141, 469, 871, 912
MlyI GAGTC 1 cut(s) 1024
MmeI TCCRAC 1 cut(s) 930
MnlI CCTC 8 cut(s) 55, 246, 716, 804, 998, 1040, 1100, 1125
Mph1103I ATGCAT 1 cut(s) 553
MroI TCCGGA 2 cut(s) 209, 630
MroXI GAANNNNTTC 2 cut(s) 582, 1071
MseI TTAA 1 cut(s) 338
MslI CAYNNNNRTG 1 cut(s) 1116
MspI CCGG 5 cut(s) 210, 391, 631, 991, 1078
MspR9I CCNGG 2 cut(s) 977, 1037
MvaI CCWGG 2 cut(s) 977, 1037
MwoI GCNNNNNNNGC 6 cut(s) 406, 422, 647, 653, 836, 1003
NdeI CATATG 2 cut(s) 447, 683
NdeII GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
NlaIII CATG 2 cut(s) 194, 566
NlaIV GGNNCC 3 cut(s) 204, 415, 568
NsiI ATGCAT 1 cut(s) 553
NspV TTCGAA 1 cut(s) 586
PaeR7I CTCGAG 1 cut(s) 1044
PagI TCATGA 1 cut(s) 190
PaqCI CACCTGC 1 cut(s) 881
PcsI WCGNNNNNNNCGW 1 cut(s) 289
PdmI GAANNNNTTC 2 cut(s) 582, 1071
PfeI GAWTC 2 cut(s) 194, 1020
PkrI GCNGC 9 cut(s) 280, 335, 396, 399, 649, 996, 1008, 1042, 1083
PleI GAGTC 1 cut(s) 1024
PpsI GAGTC 1 cut(s) 1024
Psp6I CCWGG 2 cut(s) 975, 1035
PspFI CCCAGC 1 cut(s) 158
PspGI CCWGG 2 cut(s) 975, 1035
PspN4I GGNNCC 3 cut(s) 204, 415, 568
PspPI GGNCC 1 cut(s) 973
PspXI VCTCGAGB 1 cut(s) 1044
PstI CTGCAG 1 cut(s) 1008
PstNI CAGNNNCTG 1 cut(s) 647
PsuI RGATCY 2 cut(s) 233, 920
RsaI GTAC 2 cut(s) 249, 439
RsaNI GTAC 2 cut(s) 248, 438
RseI CAYNNNNRTG 1 cut(s) 1116
SaqAI TTAA 1 cut(s) 338
SatI GCNGC 9 cut(s) 279, 334, 395, 398, 648, 995, 1007, 1041, 1082
Sau3AI GATC 8 cut(s) 112, 217, 233, 477, 559, 895, 920, 982
Sau96I GGNCC 1 cut(s) 973
SchI GAGTC 1 cut(s) 1024
ScrFI CCNGG 2 cut(s) 977, 1037
SduI GDGCHC 1 cut(s) 1090
SfaNI GCATC 4 cut(s) 145, 634, 649, 826
SfcI CTRYAG 1 cut(s) 1004
Sfr274I CTCGAG 1 cut(s) 1044
SfuI TTCGAA 1 cut(s) 586
SlaI CTCGAG 1 cut(s) 1044
SmiMI CAYNNNNRTG 1 cut(s) 1116
SmlI CTYRAG 4 cut(s) 46, 607, 808, 1044
SmoI CTYRAG 4 cut(s) 46, 607, 808, 1044
Sse9I AATT 5 cut(s) 35, 141, 469, 871, 912
SsiI CCGC 5 cut(s) 298, 334, 394, 830, 980
SspI AATATT 1 cut(s) 751
SspMI CTAG 3 cut(s) 146, 323, 375
StyD4I CCNGG 2 cut(s) 975, 1035
StyI CCWWGG 1 cut(s) 198
TaaI ACNGT 1 cut(s) 675
TaqI TCGA 4 cut(s) 76, 586, 1018, 1045
TasI AATT 5 cut(s) 35, 141, 469, 871, 912
TauI GCSGC 2 cut(s) 336, 397
TfiI GAWTC 2 cut(s) 194, 1020
Tru1I TTAA 1 cut(s) 338
Tru9I TTAA 1 cut(s) 338
TscAI CASTG 3 cut(s) 719, 910, 963
TseI GCWGC 7 cut(s) 278, 397, 647, 994, 1006, 1040, 1081
TspDTI ATGAA 4 cut(s) 207, 420, 650, 795
TspRI CASTG 3 cut(s) 719, 910, 963
XapI RAATTY 3 cut(s) 469, 871, 912
XbaI TCTAGA 1 cut(s) 145
XhoI CTCGAG 1 cut(s) 1044
XmnI GAANNNNTTC 2 cut(s) 582, 1071
XspI CTAG 3 cut(s) 146, 323, 375
Zsp2I ATGCAT 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.