transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77920 |
| fragaria_vesca | FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 |
| malus_domestica | MD08G1174200.v1.1 |
| prunus_persica | Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 |
| pyrus_communis | pycom08g14930 |
| rosa_chinensis | RchiOBHm_Chr7g0240401 |
| rosa_laevigata | RLG00000000680 |
| rosa_multiflora | Rmu_sc0002676.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00220150 |
| rosa_rugosa | Rorug07G0335500 Rorug07G0335600 Rorug07G0335700 |
| rosa_samantha | Rh7AG489800 Rh7BG462800 Rh7CG506200 Rh7DG473800 |
| rosa_wichuraiana | Rw7G040980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 164 |
| AjnI | CCWGG | 2 cut(s) | 22, 112 |
| AluBI | AGCT | 1 cut(s) | 172 |
| AluI | AGCT | 1 cut(s) | 172 |
| AoxI | GGCC | 3 cut(s) | 20, 175, 184 |
| ApeKI | GCWGC | 1 cut(s) | 119 |
| AspS9I | GGNCC | 1 cut(s) | 184 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BccI | CCATC | 2 cut(s) | 55, 142 |
| BciT130I | CCWGG | 2 cut(s) | 24, 114 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 183 |
| BisI | GCNGC | 1 cut(s) | 120 |
| BlsI | GCNGC | 1 cut(s) | 121 |
| Bme1390I | CCNGG | 2 cut(s) | 24, 114 |
| BmgT120I | GGNCC | 1 cut(s) | 184 |
| BmrFI | CCNGG | 2 cut(s) | 24, 114 |
| BmrI | ACTGGG | 1 cut(s) | 153 |
| BmsI | GCATC | 1 cut(s) | 154 |
| BmuI | ACTGGG | 1 cut(s) | 153 |
| Bse1I | ACTGG | 1 cut(s) | 148 |
| BseBI | CCWGG | 2 cut(s) | 24, 114 |
| BseGI | GGATG | 3 cut(s) | 66, 153, 169 |
| BseNI | ACTGG | 1 cut(s) | 148 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BshFI | GGCC | 3 cut(s) | 22, 177, 186 |
| BslFI | GGGAC | 1 cut(s) | 26 |
| BsmFI | GGGAC | 1 cut(s) | 26 |
| BsnI | GGCC | 3 cut(s) | 22, 177, 186 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspANI | GGCC | 3 cut(s) | 22, 177, 186 |
| BsrI | ACTGG | 1 cut(s) | 148 |
| BssMI | GATC | 1 cut(s) | 3 |
| Bst2UI | CCWGG | 2 cut(s) | 24, 114 |
| Bst4CI | ACNGT | 2 cut(s) | 138, 196 |
| BstC8I | GCNNGC | 1 cut(s) | 131 |
| BstDEI | CTNAG | 1 cut(s) | 55 |
| BstF5I | GGATG | 3 cut(s) | 66, 153, 169 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 183 |
| BstNI | CCWGG | 2 cut(s) | 24, 114 |
| BstSCI | CCNGG | 2 cut(s) | 22, 112 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| BsuRI | GGCC | 3 cut(s) | 22, 177, 186 |
| BtsCI | GGATG | 3 cut(s) | 66, 153, 169 |
| BtsIMutI | CAGTG | 1 cut(s) | 192 |
| Cac8I | GCNNGC | 1 cut(s) | 131 |
| Cfr13I | GGNCC | 1 cut(s) | 184 |
| CviJI | RGCY | 5 cut(s) | 22, 172, 177, 186, 208 |
| CviKI_1 | RGCY | 5 cut(s) | 22, 172, 177, 186, 208 |
| DdeI | CTNAG | 1 cut(s) | 55 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Eco147I | AGGCCT | 1 cut(s) | 22 |
| Eco57I | CTGAAG | 1 cut(s) | 164 |
| EcoO109I | RGGNCCY | 1 cut(s) | 184 |
| EcoRII | CCWGG | 2 cut(s) | 22, 112 |
| FaiI | YATR | 3 cut(s) | 42, 200, 218 |
| FaqI | GGGAC | 1 cut(s) | 26 |
| Fnu4HI | GCNGC | 1 cut(s) | 120 |
| FokI | GGATG | 3 cut(s) | 73, 160, 176 |
| Fsp4HI | GCNGC | 1 cut(s) | 120 |
| GluI | GCNGC | 1 cut(s) | 120 |
| HaeIII | GGCC | 3 cut(s) | 22, 177, 186 |
| Hpy166II | GTNNAC | 1 cut(s) | 141 |
| Hpy188I | TCNGA | 1 cut(s) | 223 |
| Hpy188III | TCNNGA | 1 cut(s) | 7 |
| Hpy8I | GTNNAC | 1 cut(s) | 141 |
| HpyAV | CCTTC | 2 cut(s) | 43, 188 |
| HpyCH4III | ACNGT | 2 cut(s) | 138, 196 |
| HpyCH4V | TGCA | 3 cut(s) | 122, 129, 167 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 183 |
| HpyF3I | CTNAG | 1 cut(s) | 55 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LpnPI | CCDG | 7 cut(s) | 4, 9, 36, 99, 126, 129, 167 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| LweI | GCATC | 1 cut(s) | 154 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MluCI | AATT | 1 cut(s) | 232 |
| MnlI | CCTC | 2 cut(s) | 3, 73 |
| MseI | TTAA | 1 cut(s) | 68 |
| MspR9I | CCNGG | 2 cut(s) | 24, 114 |
| MvaI | CCWGG | 2 cut(s) | 24, 114 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 183 |
| NdeII | GATC | 1 cut(s) | 3 |
| NmeAIII | GCCGAG | 1 cut(s) | 153 |
| PceI | AGGCCT | 1 cut(s) | 22 |
| PkrI | GCNGC | 1 cut(s) | 121 |
| Psp6I | CCWGG | 2 cut(s) | 22, 112 |
| PspGI | CCWGG | 2 cut(s) | 22, 112 |
| PspPI | GGNCC | 1 cut(s) | 184 |
| SaqAI | TTAA | 1 cut(s) | 68 |
| SatI | GCNGC | 1 cut(s) | 120 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| Sau96I | GGNCC | 1 cut(s) | 184 |
| ScrFI | CCNGG | 2 cut(s) | 24, 114 |
| SetI | ASST | 1 cut(s) | 174 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 183 |
| Sse9I | AATT | 1 cut(s) | 232 |
| SseBI | AGGCCT | 1 cut(s) | 22 |
| SspI | AATATT | 1 cut(s) | 73 |
| StuI | AGGCCT | 1 cut(s) | 22 |
| StyD4I | CCNGG | 2 cut(s) | 22, 112 |
| TaaI | ACNGT | 2 cut(s) | 138, 196 |
| TaqI | TCGA | 2 cut(s) | 6, 228 |
| TasI | AATT | 1 cut(s) | 232 |
| Tru1I | TTAA | 1 cut(s) | 68 |
| Tru9I | TTAA | 1 cut(s) | 68 |
| TscAI | CASTG | 1 cut(s) | 199 |
| TseI | GCWGC | 1 cut(s) | 119 |
| TspDTI | ATGAA | 1 cut(s) | 108 |
| TspRI | CASTG | 1 cut(s) | 199 |