Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002906

Physical Location & Seq

Genomic Coordinates Reverse (-)

3739217 .. 3742930

Gene Structure 3714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000680

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGTTACAAGAGAGTATGAACTATCCATCAACTCAATTTGCCGCCTCAAGACAAATGGGGATATATGAGCCGTTCCGGCAGGTGGGTGTGTGGAGAGAAACCTTCAGTGGTGGTAACGGCTCAAATATAGGTGCTTCCACAATTGTAGAGGTGGATTCTGGGCCAGAAAACAAGATCGGATTTGGTTCTCATGAATCGATGGGACCTTCTGGAAATGATCAAGAATCAAACAGATCTGCTGATAAGGTACAGAGACGCTTAGAGCAAAATCGTGAAGCTGCTCGCAAAAGTCGTATGAGGAAAAAGGCTTATGTCCAACAACTAGAAACAAGCCGTTTAAAACTAGCTCAACTGGAGCTGGAACTGGACAGGACTAGAAAACAGGTAGCCTATGGAGGCAGTTCATTTGGTGGTAGTCATATGGGATACAATGGAATTGTGAATTCAGGGATCACTACATTTGAGTTGGAATATGGACACTGGGTAGAAGAGCAGCATAGACAGAATAATGAACTTCGAAAAGCATTGCAAGAACATGCAACTGATATAGAGCTTCGATTACTTGTAGAAGGTGTTTTGAACCACTATGCTACTCTGTTCCGTATGAAGGCAGATGCTGCTAGGGCTGATATCTTTTACTTACTGTCTGGTATATGGAGAACATCAGTAGAACGTTACTTTCACTGGATTGGAGGATTTCGCCCATCAGAGCTTCTAAATATTCTCGAGCCCCAACTTGAGCCATTGACTGATCCACAACGTCTGGATTTCTATAACCTGCGGCAATCATCTCAGCAAGCTGAAGACGCTCTCTCACAGGGAATGGATAAACTACAGCAGACACTGGCCAAGACATTAGAAGCTGATCAAGTATGGAGCGGAGAAACTTATGGATCTCAGTTGGCTGCTGCATTTGAGAAATTTGAAGCACTGGAGAGCTTTGTTAGCCAGGCTGATCACCTTCGGCAGCAGACTCTGCAGCAAATGTCCCGAATCCTGACAACTCACCAAGCGGCTCGCGGCTTGCTTGCATTAGGAGAGTACTTTGAGCGTCTTCGTGCCCTCAGTTCTCTTTGGGCTGCTCGTCCACGTGAACCAACCGAGTCGTATGCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009627 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045087 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1 bZIP_2

Protein Analysis

373

Amino Acids

42.3

Weight (kDa)

6.05

Isoelectric Point (pI)

48.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_1	PF00170	80 - 117	6.9e-08	bZIP transcription factor
DOG1	PF14144	169 - 243	2.6e-29	Seed dormancy control

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002906)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77920
fragaria_vesca	FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390
malus_domestica	MD08G1174200.v1.1
prunus_persica	Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1
pyrus_communis	pycom08g14930
rosa_chinensis	RchiOBHm_Chr7g0240401
rosa_laevigata	RLG00000000680
rosa_multiflora	Rmu_sc0002676.1_g000006
rosa_roxburghii	Rroxscaffold_3G00220150
rosa_rugosa	Rorug07G0335500 Rorug07G0335600 Rorug07G0335700
rosa_samantha	Rh7AG489800 Rh7BG462800 Rh7CG506200 Rh7DG473800
rosa_wichuraiana	Rw7G040980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	70
Acc36I	ACCTGC	2 cut(s)	70, 786
AccBSI	CCGCTC	1 cut(s)	879
AccII	CGCG	1 cut(s)	1020
AciI	CCGC	5 cut(s)	42, 781, 879, 1013, 1020
AclI	AACGTT	1 cut(s)	673
AclWI	GGATC	3 cut(s)	458, 746, 901
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	2 cut(s)	442, 920
AcuI	CTGAAG	2 cut(s)	88, 822
AcvI	CACGTG	1 cut(s)	1091
AfaI	GTAC	2 cut(s)	249, 1043
AfiI	CCNNNNNNNGG	2 cut(s)	82, 607
AgsI	TTSAA	2 cut(s)	580, 926
AjnI	CCWGG	1 cut(s)	948
AluBI	AGCT	8 cut(s)	278, 347, 358, 553, 712, 800, 863, 939
AluI	AGCT	8 cut(s)	278, 347, 358, 553, 712, 800, 863, 939
Alw26I	GTCTC	1 cut(s)	247
AlwI	GGATC	3 cut(s)	458, 746, 901
AlwNI	CAGNNNCTG	3 cut(s)	617, 844, 976
Ama87I	CYCGRG	1 cut(s)	725
AoxI	GGCC	2 cut(s)	161, 846
ApeKI	GCWGC	8 cut(s)	278, 493, 617, 905, 908, 967, 979, 1079
ApoI	RAATTY	2 cut(s)	442, 920
AspS9I	GGNCC	2 cut(s)	161, 203
AsuHPI	GGTGA	2 cut(s)	950, 998
AsuII	TTCGAA	1 cut(s)	517
AvaI	CYCGRG	1 cut(s)	725
AvaII	GGWCC	1 cut(s)	203
BaeGI	GKGCMC	1 cut(s)	1063
BalI	TGGCCA	1 cut(s)	848
BanII	GRGCYC	1 cut(s)	732
BbrPI	CACGTG	1 cut(s)	1091
BbsI	GAAGAC	2 cut(s)	810, 1046
BbvI	GCAGC	8 cut(s)	265, 505, 604, 892, 895, 979, 991, 1066
BccI	CCATC	3 cut(s)	34, 193, 712
BceAI	ACGGC	3 cut(s)	55, 133, 318
BcgI	CGANNNNNNTGC	1 cut(s)	1091
BciT130I	CCWGG	1 cut(s)	950
BciVI	GTATCC	1 cut(s)	419
BclI	TGATCA	3 cut(s)	217, 865, 955
BcoDI	GTCTC	1 cut(s)	247
BfaI	CTAG	4 cut(s)	323, 344, 375, 621
BfmI	CTRYAG	2 cut(s)	833, 977
BfuAI	ACCTGC	2 cut(s)	70, 786
BfuI	GTATCC	1 cut(s)	419
BglI	GCCNNNNNGGC	1 cut(s)	76
BglII	AGATCT	1 cut(s)	233
BmcAI	AGTACT	1 cut(s)	1043
Bme1390I	CCNGG	1 cut(s)	950
Bme18I	GGWCC	1 cut(s)	203
BmeT110I	CYCGRG	1 cut(s)	725
BmgT120I	GGNCC	2 cut(s)	161, 203
BmiI	GGNNCC	1 cut(s)	204
BmrFI	CCNGG	1 cut(s)	950
BmrI	ACTGGG	1 cut(s)	490
BmsI	GCATC	1 cut(s)	604
BmuI	ACTGGG	1 cut(s)	490
BpiI	GAAGAC	2 cut(s)	810, 1046
BpmI	CTGGAG	2 cut(s)	374, 953
Bpu14I	TTCGAA	1 cut(s)	517
BpuEI	CTTGAG	2 cut(s)	31, 758
Bsa29I	ATCGAT	1 cut(s)	197
BsaAI	YACGTR	1 cut(s)	1091
Bsc4I	CCNNNNNNNGG	2 cut(s)	82, 607
Bse1I	ACTGG	6 cut(s)	357, 369, 485, 689, 849, 936
Bse3DI	GCAATG	1 cut(s)	524
BseBI	CCWGG	1 cut(s)	950
BseCI	ATCGAT	1 cut(s)	197
BseLI	CCNNNNNNNGG	2 cut(s)	82, 607
BseMI	GCAATG	1 cut(s)	524
BseMII	CTCAG	3 cut(s)	806, 911, 1078
BseNI	ACTGG	6 cut(s)	357, 369, 485, 689, 849, 936
BseSI	GKGCMC	1 cut(s)	1063
BseXI	GCAGC	8 cut(s)	265, 505, 604, 892, 895, 979, 991, 1066
Bsh1236I	CGCG	1 cut(s)	1020
BshFI	GGCC	2 cut(s)	163, 848
BshVI	ATCGAT	1 cut(s)	197
BsiHKCI	CYCGRG	1 cut(s)	725
BsiSI	CCGG	1 cut(s)	76
BslFI	GGGAC	2 cut(s)	216, 973
BslI	CCNNNNNNNGG	2 cut(s)	82, 607
BsmAI	GTCTC	1 cut(s)	247
BsmBI	CGTCTC	1 cut(s)	247
BsmFI	GGGAC	2 cut(s)	216, 973
BsnI	GGCC	2 cut(s)	163, 848
BsoBI	CYCGRG	1 cut(s)	725
Bsp119I	TTCGAA	1 cut(s)	517
Bsp1286I	GDGCHC	2 cut(s)	732, 1063
Bsp143I	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
BspACI	CCGC	5 cut(s)	42, 781, 879, 1013, 1020
BspANI	GGCC	2 cut(s)	163, 848
BspCNI	CTCAG	3 cut(s)	805, 910, 1077
BspDI	ATCGAT	1 cut(s)	197
BspFNI	CGCG	1 cut(s)	1020
BspHI	TCATGA	1 cut(s)	190
BspLI	GGNNCC	1 cut(s)	204
BspMAI	CTGCAG	1 cut(s)	981
BspMI	ACCTGC	2 cut(s)	70, 786
BspPI	GGATC	3 cut(s)	458, 746, 901
BspQI	GCTCTTC	1 cut(s)	483
BspT104I	TTCGAA	1 cut(s)	517
BsrBI	CCGCTC	1 cut(s)	879
BsrDI	GCAATG	1 cut(s)	524
BsrI	ACTGG	6 cut(s)	357, 369, 485, 689, 849, 936
BssMI	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
Bst2UI	CCWGG	1 cut(s)	950
Bst4CI	ACNGT	1 cut(s)	645
Bst6I	CTCTTC	1 cut(s)	483
BstAPI	GCANNNNNTGC	2 cut(s)	617, 976
BstBAI	YACGTR	1 cut(s)	1091
BstBI	TTCGAA	1 cut(s)	517
BstC8I	GCNNGC	5 cut(s)	283, 798, 1018, 1025, 1029
BstDEI	CTNAG	4 cut(s)	259, 792, 897, 1064
BstFNI	CGCG	1 cut(s)	1020
BstKTI	GATC	8 cut(s)	177, 220, 236, 453, 754, 868, 896, 958
BstMAI	GTCTC	1 cut(s)	247
BstMBI	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
BstMWI	GCNNNNNNNGC	6 cut(s)	76, 617, 623, 806, 945, 976
BstNI	CCWGG	1 cut(s)	950
BstNSI	RCATGY	1 cut(s)	539
BstSCI	CCNGG	1 cut(s)	948
BstSFI	CTRYAG	2 cut(s)	833, 977
BstSLI	GKGCMC	1 cut(s)	1063
BstUI	CGCG	1 cut(s)	1020
BstV1I	GCAGC	8 cut(s)	265, 505, 604, 892, 895, 979, 991, 1066
BstV2I	GAAGAC	2 cut(s)	810, 1046
BstX2I	RGATCY	2 cut(s)	233, 893
BstYI	RGATCY	2 cut(s)	233, 893
Bsu15I	ATCGAT	1 cut(s)	197
BsuI	GTATCC	1 cut(s)	419
BsuRI	GGCC	2 cut(s)	163, 848
BsuTUI	ATCGAT	1 cut(s)	197
BtsIMutI	CAGTG	5 cut(s)	112, 478, 682, 842, 929
BveI	ACCTGC	2 cut(s)	70, 786
Cac8I	GCNNGC	5 cut(s)	283, 798, 1018, 1025, 1029
CaiI	CAGNNNCTG	3 cut(s)	617, 844, 976
CciI	TCATGA	1 cut(s)	190
Cfr13I	GGNCC	2 cut(s)	161, 203
ClaI	ATCGAT	1 cut(s)	197
CseI	GACGC	3 cut(s)	264, 815, 1040
Csp6I	GTAC	2 cut(s)	248, 1042
CviAII	CATG	2 cut(s)	191, 536
CviQI	GTAC	2 cut(s)	248, 1042
DdeI	CTNAG	4 cut(s)	259, 792, 897, 1064
DpnI	GATC	8 cut(s)	176, 219, 235, 452, 753, 867, 895, 957
DpnII	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
DraI	TTTAAA	1 cut(s)	339
EaeI	YGGCCR	1 cut(s)	846
Eam1104I	CTCTTC	1 cut(s)	483
EarI	CTCTTC	1 cut(s)	483
Eco24I	GRGCYC	1 cut(s)	732
Eco32I	GATATC	1 cut(s)	631
Eco47I	GGWCC	1 cut(s)	203
Eco57I	CTGAAG	2 cut(s)	88, 822
Eco72I	CACGTG	1 cut(s)	1091
Eco88I	CYCGRG	1 cut(s)	725
EcoO109I	RGGNCCY	1 cut(s)	203
EcoRI	GAATTC	1 cut(s)	442
EcoRII	CCWGG	1 cut(s)	948
EcoRV	GATATC	1 cut(s)	631
EcoT22I	ATGCAT	1 cut(s)	1114
EcoT38I	GRGCYC	1 cut(s)	732
Esp3I	CGTCTC	1 cut(s)	247
FaeI	CATG	2 cut(s)	194, 539
FaqI	GGGAC	2 cut(s)	216, 973
FatI	CATG	2 cut(s)	190, 535
FauNDI	CATATG	1 cut(s)	420
FbaI	TGATCA	3 cut(s)	217, 865, 955
FriOI	GRGCYC	1 cut(s)	732
FspBI	CTAG	4 cut(s)	323, 344, 375, 621
GsuI	CTGGAG	2 cut(s)	374, 953
HaeIII	GGCC	2 cut(s)	163, 848
HapII	CCGG	1 cut(s)	76
HgaI	GACGC	3 cut(s)	264, 815, 1040
Hin1II	CATG	2 cut(s)	194, 539
HinfI	GANTC	6 cut(s)	155, 194, 224, 973, 993, 1103
HpaII	CCGG	1 cut(s)	76
HphI	GGTGA	2 cut(s)	950, 998
Hpy166II	GTNNAC	2 cut(s)	1088, 1094
Hpy188I	TCNGA	2 cut(s)	179, 709
Hpy188III	TCNNGA	9 cut(s)	48, 191, 210, 221, 272, 725, 764, 990, 997
Hpy8I	GTNNAC	2 cut(s)	1088, 1094
HpyAV	CCTTC	5 cut(s)	112, 216, 563, 601, 971
HpyCH4III	ACNGT	1 cut(s)	645
HpyCH4IV	ACGT	3 cut(s)	673, 760, 1090
HpyCH4V	TGCA	6 cut(s)	529, 539, 911, 979, 1031, 1112
HpyF10VI	GCNNNNNNNGC	6 cut(s)	76, 617, 623, 806, 945, 976
HpyF3I	CTNAG	4 cut(s)	259, 792, 897, 1064
HpySE526I	ACGT	3 cut(s)	673, 760, 1090
Hsp92II	CATG	2 cut(s)	194, 539
Ksp22I	TGATCA	3 cut(s)	217, 865, 955
Kzo9I	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
LguI	GCTCTTC	1 cut(s)	483
LmnI	GCTCC	2 cut(s)	355, 876
Lsp1109I	GCAGC	8 cut(s)	265, 505, 604, 892, 895, 979, 991, 1066
LweI	GCATC	1 cut(s)	604
MaeI	CTAG	4 cut(s)	323, 344, 375, 621
MaeII	ACGT	3 cut(s)	673, 760, 1090
MaeIII	GTNAC	3 cut(s)	3, 113, 674
MalI	GATC	8 cut(s)	176, 219, 235, 452, 753, 867, 895, 957
MbiI	CCGCTC	1 cut(s)	879
MboI	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
MboII	GAAGA	3 cut(s)	500, 815, 1046
MfeI	CAATTG	1 cut(s)	141
MflI	RGATCY	2 cut(s)	233, 893
MhlI	GDGCHC	2 cut(s)	732, 1063
MlsI	TGGCCA	1 cut(s)	848
MluCI	AATT	5 cut(s)	35, 141, 435, 442, 920
MluNI	TGGCCA	1 cut(s)	848
MlyI	GAGTC	2 cut(s)	967, 1112
MmeI	TCCRAC	2 cut(s)	340, 447
MnlI	CCTC	6 cut(s)	55, 142, 291, 389, 686, 1073
Mox20I	TGGCCA	1 cut(s)	848
Mph1103I	ATGCAT	1 cut(s)	1114
MscI	TGGCCA	1 cut(s)	848
MseI	TTAA	1 cut(s)	338
Msp20I	TGGCCA	1 cut(s)	848
MspI	CCGG	1 cut(s)	76
MspR9I	CCNGG	1 cut(s)	950
MunI	CAATTG	1 cut(s)	141
MvaI	CCWGG	1 cut(s)	950
MvnI	CGCG	1 cut(s)	1020
MwoI	GCNNNNNNNGC	6 cut(s)	76, 617, 623, 806, 945, 976
NdeI	CATATG	1 cut(s)	420
NdeII	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
NlaIII	CATG	2 cut(s)	194, 539
NlaIV	GGNNCC	1 cut(s)	204
NsiI	ATGCAT	1 cut(s)	1114
NspI	RCATGY	1 cut(s)	539
NspV	TTCGAA	1 cut(s)	517
PaeR7I	CTCGAG	1 cut(s)	725
PagI	TCATGA	1 cut(s)	190
PaqCI	CACCTGC	1 cut(s)	70
PciSI	GCTCTTC	1 cut(s)	483
PcsI	WCGNNNNNNNCGW	1 cut(s)	289
PfeI	GAWTC	4 cut(s)	155, 194, 224, 993
PleI	GAGTC	2 cut(s)	967, 1111
PmaCI	CACGTG	1 cut(s)	1091
PmlI	CACGTG	1 cut(s)	1091
PpsI	GAGTC	2 cut(s)	967, 1111
Ppu21I	YACGTR	1 cut(s)	1091
PpuMI	RGGWCCY	1 cut(s)	203
Psp1406I	AACGTT	1 cut(s)	673
Psp5II	RGGWCCY	1 cut(s)	203
Psp6I	CCWGG	1 cut(s)	948
PspCI	CACGTG	1 cut(s)	1091
PspGI	CCWGG	1 cut(s)	948
PspN4I	GGNNCC	1 cut(s)	204
PspPI	GGNCC	2 cut(s)	161, 203
PspPPI	RGGWCCY	1 cut(s)	203
PstI	CTGCAG	1 cut(s)	981
PstNI	CAGNNNCTG	3 cut(s)	617, 844, 976
PsuI	RGATCY	2 cut(s)	233, 893
RsaI	GTAC	2 cut(s)	249, 1043
RsaNI	GTAC	2 cut(s)	248, 1042
SapI	GCTCTTC	1 cut(s)	483
SaqAI	TTAA	1 cut(s)	338
Sau3AI	GATC	8 cut(s)	174, 217, 233, 450, 751, 865, 893, 955
Sau96I	GGNCC	2 cut(s)	161, 203
ScaI	AGTACT	1 cut(s)	1043
SchI	GAGTC	2 cut(s)	967, 1112
ScrFI	CCNGG	1 cut(s)	950
SduI	GDGCHC	2 cut(s)	732, 1063
SfaNI	GCATC	1 cut(s)	604
SfcI	CTRYAG	2 cut(s)	833, 977
Sfr274I	CTCGAG	1 cut(s)	725
SfuI	TTCGAA	1 cut(s)	517
SinI	GGWCC	1 cut(s)	203
SlaI	CTCGAG	1 cut(s)	725
SmlI	CTYRAG	3 cut(s)	46, 725, 737
SmoI	CTYRAG	3 cut(s)	46, 725, 737
Sse9I	AATT	5 cut(s)	35, 141, 435, 442, 920
SsiI	CCGC	5 cut(s)	42, 781, 879, 1013, 1020
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	4 cut(s)	323, 344, 375, 621
StyD4I	CCNGG	1 cut(s)	948
TaaI	ACNGT	1 cut(s)	645
TaiI	ACGT	3 cut(s)	676, 763, 1093
TaqI	TCGA	4 cut(s)	197, 517, 556, 726
TasI	AATT	5 cut(s)	35, 141, 435, 442, 920
TatI	WGTACW	1 cut(s)	1041
TauI	GCSGC	4 cut(s)	44, 784, 1016, 1023
TfiI	GAWTC	4 cut(s)	155, 194, 224, 993
Tru1I	TTAA	1 cut(s)	338
Tru9I	TTAA	1 cut(s)	338
TscAI	CASTG	5 cut(s)	112, 485, 689, 849, 936
TseI	GCWGC	8 cut(s)	278, 493, 617, 905, 908, 967, 979, 1079
TspDTI	ATGAA	5 cut(s)	32, 207, 393, 525, 620
TspGWI	ACGGA	1 cut(s)	590
TspRI	CASTG	5 cut(s)	112, 485, 689, 849, 936
VpaK11BI	GGWCC	1 cut(s)	203
XapI	RAATTY	2 cut(s)	442, 920
XceI	RCATGY	1 cut(s)	539
XhoI	CTCGAG	1 cut(s)	725
XspI	CTAG	4 cut(s)	323, 344, 375, 621
ZrmI	AGTACT	1 cut(s)	1043
Zsp2I	ATGCAT	1 cut(s)	1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.