Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002676.1

Orthogroup ID

OG0002906

Physical Location & Seq

Genomic Coordinates Reverse (-)

38240 .. 44506

Gene Structure 6267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002676.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

atggggatatatgagccgttccggcaggtgggtgtgtggcgagaaaccttcagtggtggttacggctcaaatataggtgcttccacaattgtagaggtggattctgggctagaaaacaagatcggatttggttctcacgaatcgatgggaccttctggaaatgatcaagaatcaaacagatctgctgataaggtacagagacgcttagagcaaaatcgtgaagctgctcgcaaaagtcgtatgaggaaaaaggcttatgtccaacaactagaaacaagccgtttaaaactggcgcaactggagctcgaactggacaggactagaaaacaggtagcctatggaggcagttcatttggtggtggtcatatgggatacaatggaattgtgaattcagggatcactacatttgagttggaatatggacactgggtagaagagcagcatagacagaataatgaacttcgaaaagcattgcaagaacatgcaactgaaatagagcttcgattacttgtagaaggtggtttgaatcactatgctactcttttccgtatgaaggcagatgctgctaaggctgatatcttttatttactgtctggtatatggagaacttcagtagaacgttactttcactggattggaggatttcgcccatcagagcttctaaatattatcgagccccaacttgagccattgactgatccacaacctctggatttctataacctgcggcaatcatctcagcaagctgaagacgctctctcacagggaatggataaactacagcagacactggccaagacattagaagctgatcaaatatggagcggagaaacttatggttctcagatggctgctgcatttgagaaatttgaagcactggagagctttgttagccaggctgatcaccttcggcagcagactctgcagcaaatgtcccgaattctcacaactcaccaagcggctcgcggcttgcttgcattaggagagtactttgagcgtcttcgtgccctcagttctctttgggctgctcgtccacgtgaaccagccgcacaccaagctcgcttcagctttagggtttcctttcagcgaaaccctaattactcgccgcctagtctttcaccggcgtcgtccgatttcgcgagattgaaccggagcgagtcgtggttccgagcgaaccagagaagatccattgttagggcgtcgaattggacccaccccaagtctccctacgaaactcttgaattagagttggatgctgatgatgaacagataaaggttgcttacagaagattggccaagttttatcatcctgatgtctatgatggcagagggaccctagaggagggggaaacagctgaagctaggtttatcaagattcaagctgcttatgaattgcttttagatgaagagaagaggggccaatatgacagggataaccgagtcaacccattgaaagcatctgaagcatggatggagtggctaatgaaaaagcgaaaagcttttgatcagcgaggtgatatggcaatagcggcttgggctgagcaacagcagcgtgagatgaatatccgtgcacgtcgactctctcgttccaaggttgaccctgacgaagagaagagaatcctggcgagagaaaagaaggcctctgcagagtatttctctagtacgctgaagcgtcacacactagtcttaaagaaaagagacctcatgagaaggaaagcagaggaagataagagaaaaatcatcggtcagcttttagctgcagagggacttgagcttgacacagatgatgaagaaactcggaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009627 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045087 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1 bZIP_2

Protein Analysis

601

Amino Acids

69.24

Weight (kDa)

8.33

Isoelectric Point (pI)

50.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002906)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77920
fragaria_vesca	FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390 FvH4_5g38390
malus_domestica	MD08G1174200.v1.1
prunus_persica	Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1 Prupe.1G508100_v2.0.a1
pyrus_communis	pycom08g14930
rosa_chinensis	RchiOBHm_Chr7g0240401
rosa_laevigata	RLG00000000680
rosa_multiflora	Rmu_sc0002676.1_g000006
rosa_roxburghii	Rroxscaffold_3G00220150
rosa_rugosa	Rorug07G0335500 Rorug07G0335600 Rorug07G0335700
rosa_samantha	Rh7AG489800 Rh7BG462800 Rh7CG506200 Rh7DG473800
rosa_wichuraiana	Rw7G040980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	16
Acc36I	ACCTGC	2 cut(s)	16, 732
AccBSI	CCGCTC	1 cut(s)	825
AccI	GTMKAC	1 cut(s)	1576
AccII	CGCG	2 cut(s)	966, 1139
AciI	CCGC	7 cut(s)	727, 825, 959, 966, 1047, 1106, 1529
AclI	AACGTT	1 cut(s)	619
AclWI	GGATC	3 cut(s)	404, 692, 1179
AcoI	YGGCCR	2 cut(s)	792, 1293
AcsI	RAATTY	3 cut(s)	388, 866, 939
AcuI	CTGAAG	7 cut(s)	34, 594, 768, 1048, 1377, 1482, 1688
AcvI	CACGTG	1 cut(s)	1037
AcyI	GRCGYC	2 cut(s)	1124, 1199
AfaI	GTAC	3 cut(s)	195, 989, 1663
AfiI	CCNNNNNNNGG	4 cut(s)	28, 553, 1194, 1342
AgsI	TTSAA	6 cut(s)	526, 872, 1147, 1241, 1379, 1453
AhlI	ACTAGT	1 cut(s)	1681
AjiI	CACGTC	1 cut(s)	1574
AjnI	CCWGG	2 cut(s)	894, 1620
Alw21I	GWGCWC	2 cut(s)	306, 1573
Alw26I	GTCTC	3 cut(s)	193, 1227, 1692
Alw44I	GTGCAC	1 cut(s)	1569
AlwI	GGATC	3 cut(s)	404, 692, 1179
AlwNI	CAGNNNCTG	3 cut(s)	563, 790, 922
AoxI	GGCC	4 cut(s)	792, 1293, 1417, 1638
ApaLI	GTGCAC	1 cut(s)	1569
ApoI	RAATTY	3 cut(s)	388, 866, 939
AspLEI	GCGC	1 cut(s)	295
AspS9I	GGNCC	4 cut(s)	149, 1209, 1332, 1417
AsuHPI	GGTGA	4 cut(s)	896, 944, 1110, 1526
AsuII	TTCGAA	1 cut(s)	463
AvaII	GGWCC	3 cut(s)	149, 1209, 1332
BaeGI	GKGCMC	2 cut(s)	1009, 1573
BalI	TGGCCA	2 cut(s)	794, 1295
BanII	GRGCYC	2 cut(s)	306, 678
BbrPI	CACGTG	1 cut(s)	1037
BbsI	GAAGAC	2 cut(s)	756, 992
Bbv12I	GWGCWC	2 cut(s)	306, 1573
BccI	CCATC	5 cut(s)	139, 658, 841, 1316, 1465
BceAI	ACGGC	2 cut(s)	79, 264
BciT130I	CCWGG	2 cut(s)	896, 1622
BciVI	GTATCC	1 cut(s)	365
BclI	TGATCA	4 cut(s)	163, 811, 901, 1504
BcoDI	GTCTC	3 cut(s)	193, 1227, 1692
BcuI	ACTAGT	1 cut(s)	1681
BfaI	CTAG	8 cut(s)	110, 269, 321, 1110, 1337, 1362, 1659, 1682
BfmI	CTRYAG	4 cut(s)	779, 923, 1644, 1758
BfuAI	ACCTGC	2 cut(s)	16, 732
BfuI	GTATCC	1 cut(s)	365
BglI	GCCNNNNNGGC	1 cut(s)	22
BglII	AGATCT	1 cut(s)	179
BlpI	GCTNAGC	1 cut(s)	1539
BmcAI	AGTACT	1 cut(s)	989
Bme1390I	CCNGG	2 cut(s)	896, 1622
Bme18I	GGWCC	3 cut(s)	149, 1209, 1332
BmgBI	CACGTC	1 cut(s)	1574
BmgT120I	GGNCC	4 cut(s)	149, 1209, 1332, 1417
BmiI	GGNNCC	6 cut(s)	150, 1166, 1211, 1333, 1334, 1418
BmrFI	CCNGG	2 cut(s)	896, 1622
BmrI	ACTGGG	1 cut(s)	436
BmsI	GCATC	3 cut(s)	550, 1243, 1466
BmuI	ACTGGG	1 cut(s)	436
BpiI	GAAGAC	2 cut(s)	756, 992
BplI	GAGNNNNNCTC	2 cut(s)	1640, 1672
BpmI	CTGGAG	2 cut(s)	320, 899
Bpu10I	CCTNAGC	1 cut(s)	567
Bpu1102I	GCTNAGC	1 cut(s)	1539
Bpu14I	TTCGAA	1 cut(s)	463
BpuEI	CTTGAG	2 cut(s)	704, 1790
Bsa29I	ATCGAT	1 cut(s)	143
BsaAI	YACGTR	1 cut(s)	1037
BsaBI	GATNNNNATC	1 cut(s)	1562
BsaHI	GRCGYC	2 cut(s)	1124, 1199
BsaI	GGTCTC	1 cut(s)	1692
BsaJI	CCNNGG	1 cut(s)	1590
BsaWI	WCCGGW	1 cut(s)	1149
Bsc4I	CCNNNNNNNGG	4 cut(s)	28, 553, 1194, 1342
Bse118I	RCCGGY	1 cut(s)	1120
Bse1I	ACTGG	7 cut(s)	294, 303, 315, 431, 635, 795, 882
Bse3DI	GCAATG	1 cut(s)	470
Bse8I	GATNNNNATC	1 cut(s)	1562
BseBI	CCWGG	2 cut(s)	896, 1622
BseCI	ATCGAT	1 cut(s)	143
BseDI	CCNNGG	1 cut(s)	1590
BseGI	GGATG	3 cut(s)	1258, 1306, 1476
BseJI	GATNNNNATC	1 cut(s)	1562
BseLI	CCNNNNNNNGG	4 cut(s)	28, 553, 1194, 1342
BseMI	GCAATG	1 cut(s)	470
BseMII	CTCAG	4 cut(s)	752, 857, 1024, 1530
BseNI	ACTGG	7 cut(s)	294, 303, 315, 431, 635, 795, 882
BseRI	GAGGAG	1 cut(s)	1355
BseSI	GKGCMC	2 cut(s)	1009, 1573
Bsh1236I	CGCG	2 cut(s)	966, 1139
BshFI	GGCC	4 cut(s)	794, 1295, 1419, 1640
BshVI	ATCGAT	1 cut(s)	143
BsiHKAI	GWGCWC	2 cut(s)	306, 1573
BsiSI	CCGG	3 cut(s)	22, 1121, 1150
BslFI	GGGAC	4 cut(s)	162, 919, 1345, 1779
BslI	CCNNNNNNNGG	4 cut(s)	28, 553, 1194, 1342
BsmAI	GTCTC	3 cut(s)	193, 1227, 1692
BsmBI	CGTCTC	1 cut(s)	193
BsmFI	GGGAC	4 cut(s)	162, 919, 1345, 1779
BsnI	GGCC	4 cut(s)	794, 1295, 1419, 1640
Bso31I	GGTCTC	1 cut(s)	1692
Bsp119I	TTCGAA	1 cut(s)	463
Bsp1286I	GDGCHC	4 cut(s)	306, 678, 1009, 1573
Bsp143I	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
Bsp1720I	GCTNAGC	1 cut(s)	1539
Bsp68I	TCGCGA	1 cut(s)	1139
BspACI	CCGC	7 cut(s)	727, 825, 959, 966, 1047, 1106, 1529
BspANI	GGCC	4 cut(s)	794, 1295, 1419, 1640
BspCNI	CTCAG	4 cut(s)	751, 856, 1023, 1531
BspDI	ATCGAT	1 cut(s)	143
BspFNI	CGCG	2 cut(s)	966, 1139
BspHI	TCATGA	1 cut(s)	1704
BspLI	GGNNCC	6 cut(s)	150, 1166, 1211, 1333, 1334, 1418
BspMAI	CTGCAG	3 cut(s)	927, 1648, 1762
BspMI	ACCTGC	2 cut(s)	16, 732
BspPI	GGATC	3 cut(s)	404, 692, 1179
BspQI	GCTCTTC	1 cut(s)	429
BspT104I	TTCGAA	1 cut(s)	463
BspTNI	GGTCTC	1 cut(s)	1692
BsrBI	CCGCTC	1 cut(s)	825
BsrDI	GCAATG	1 cut(s)	470
BsrFI	RCCGGY	1 cut(s)	1120
BsrI	ACTGG	7 cut(s)	294, 303, 315, 431, 635, 795, 882
BssAI	RCCGGY	1 cut(s)	1120
BssECI	CCNNGG	1 cut(s)	1590
BssMI	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
BssNI	GRCGYC	2 cut(s)	1124, 1199
BssT1I	CCWWGG	1 cut(s)	1590
Bst2UI	CCWGG	2 cut(s)	896, 1622
Bst4CI	ACNGT	1 cut(s)	591
Bst6I	CTCTTC	5 cut(s)	429, 1401, 1406, 1602, 1607
BstACI	GRCGYC	2 cut(s)	1124, 1199
BstAPI	GCANNNNNTGC	2 cut(s)	563, 922
BstBAI	YACGTR	1 cut(s)	1037
BstBI	TTCGAA	1 cut(s)	463
BstC8I	GCNNGC	6 cut(s)	229, 744, 964, 971, 975, 1060
BstDEI	CTNAG	6 cut(s)	205, 567, 738, 843, 1010, 1539
BstENI	CCTNNNNNAGG	1 cut(s)	1340
BstF5I	GGATG	3 cut(s)	1258, 1306, 1476
BstFNI	CGCG	2 cut(s)	966, 1139
BstHHI	GCGC	1 cut(s)	295
BstKTI	GATC	9 cut(s)	123, 166, 182, 399, 700, 814, 904, 1187, 1507
BstMAI	GTCTC	3 cut(s)	193, 1227, 1692
BstMBI	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
BstNI	CCWGG	2 cut(s)	896, 1622
BstNSI	RCATGY	1 cut(s)	485
BstSCI	CCNGG	2 cut(s)	894, 1620
BstSFI	CTRYAG	4 cut(s)	779, 923, 1644, 1758
BstSLI	GKGCMC	2 cut(s)	1009, 1573
BstUI	CGCG	2 cut(s)	966, 1139
BstV2I	GAAGAC	2 cut(s)	756, 992
BstX2I	RGATCY	2 cut(s)	179, 1184
BstYI	RGATCY	2 cut(s)	179, 1184
Bsu15I	ATCGAT	1 cut(s)	143
BsuI	GTATCC	1 cut(s)	365
BsuRI	GGCC	4 cut(s)	794, 1295, 1419, 1640
BsuTUI	ATCGAT	1 cut(s)	143
BtrI	CACGTC	1 cut(s)	1574
BtsCI	GGATG	3 cut(s)	1258, 1306, 1476
BtsIMutI	CAGTG	5 cut(s)	58, 424, 628, 788, 875
BtuMI	TCGCGA	1 cut(s)	1139
BveI	ACCTGC	2 cut(s)	16, 732
Cac8I	GCNNGC	6 cut(s)	229, 744, 964, 971, 975, 1060
CaiI	CAGNNNCTG	3 cut(s)	563, 790, 922
CciI	TCATGA	1 cut(s)	1704
CfoI	GCGC	1 cut(s)	295
Cfr10I	RCCGGY	1 cut(s)	1120
Cfr13I	GGNCC	4 cut(s)	149, 1209, 1332, 1417
ClaI	ATCGAT	1 cut(s)	143
CseI	GACGC	6 cut(s)	210, 761, 986, 1113, 1188, 1661
Csp6I	GTAC	3 cut(s)	194, 988, 1662
CviAII	CATG	3 cut(s)	482, 1467, 1705
CviQI	GTAC	3 cut(s)	194, 988, 1662
DdeI	CTNAG	6 cut(s)	205, 567, 738, 843, 1010, 1539
DpnI	GATC	9 cut(s)	122, 165, 181, 398, 699, 813, 903, 1186, 1506
DpnII	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
DraI	TTTAAA	1 cut(s)	285
EaeI	YGGCCR	2 cut(s)	792, 1293
Eam1104I	CTCTTC	5 cut(s)	429, 1401, 1406, 1602, 1607
EarI	CTCTTC	5 cut(s)	429, 1401, 1406, 1602, 1607
Ecl136II	GAGCTC	1 cut(s)	304
Eco130I	CCWWGG	1 cut(s)	1590
Eco147I	AGGCCT	1 cut(s)	1640
Eco24I	GRGCYC	2 cut(s)	306, 678
Eco31I	GGTCTC	1 cut(s)	1692
Eco32I	GATATC	1 cut(s)	577
Eco47I	GGWCC	3 cut(s)	149, 1209, 1332
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	7 cut(s)	34, 594, 768, 1048, 1377, 1482, 1688
Eco72I	CACGTG	1 cut(s)	1037
EcoICRI	GAGCTC	1 cut(s)	304
EcoNI	CCTNNNNNAGG	1 cut(s)	1340
EcoO109I	RGGNCCY	2 cut(s)	149, 1332
EcoRI	GAATTC	2 cut(s)	388, 939
EcoRII	CCWGG	2 cut(s)	894, 1620
EcoRV	GATATC	1 cut(s)	577
EcoT14I	CCWWGG	1 cut(s)	1590
EcoT38I	GRGCYC	2 cut(s)	306, 678
ErhI	CCWWGG	1 cut(s)	1590
Esp3I	CGTCTC	1 cut(s)	193
FaeI	CATG	3 cut(s)	485, 1470, 1708
FaqI	GGGAC	4 cut(s)	162, 919, 1345, 1779
FatI	CATG	3 cut(s)	481, 1466, 1704
FauNDI	CATATG	1 cut(s)	366
FbaI	TGATCA	4 cut(s)	163, 811, 901, 1504
FblI	GTMKAC	1 cut(s)	1576
FokI	GGATG	3 cut(s)	1265, 1293, 1483
FriOI	GRGCYC	2 cut(s)	306, 678
FspBI	CTAG	8 cut(s)	110, 269, 321, 1110, 1337, 1362, 1659, 1682
GlaI	GCGC	1 cut(s)	294
GsuI	CTGGAG	2 cut(s)	320, 899
HaeIII	GGCC	4 cut(s)	794, 1295, 1419, 1640
HapII	CCGG	3 cut(s)	22, 1121, 1150
HgaI	GACGC	6 cut(s)	210, 761, 986, 1113, 1188, 1661
HhaI	GCGC	1 cut(s)	295
Hin1I	GRCGYC	2 cut(s)	1124, 1199
Hin1II	CATG	3 cut(s)	485, 1470, 1708
Hin6I	GCGC	1 cut(s)	293
HinP1I	GCGC	1 cut(s)	293
HincII	GTYRAC	3 cut(s)	1444, 1577, 1597
HindII	GTYRAC	3 cut(s)	1444, 1577, 1597
HindIII	AAGCTT	1 cut(s)	1497
HpaII	CCGG	3 cut(s)	22, 1121, 1150
HphI	GGTGA	4 cut(s)	896, 944, 1110, 1526
Hpy166II	GTNNAC	6 cut(s)	1034, 1040, 1444, 1571, 1577, 1597
Hpy188I	TCNGA	7 cut(s)	125, 655, 846, 1132, 1169, 1462, 1800
Hpy8I	GTNNAC	6 cut(s)	1034, 1040, 1444, 1571, 1577, 1597
Hpy99I	CGWCG	3 cut(s)	1129, 1204, 1578
HpyAV	CCTTC	7 cut(s)	58, 162, 509, 547, 917, 1630, 1704
HpyCH4III	ACNGT	1 cut(s)	591
HpyCH4IV	ACGT	3 cut(s)	619, 1036, 1573
HpyCH4V	TGCA	8 cut(s)	475, 485, 857, 925, 977, 1571, 1646, 1760
HpyF3I	CTNAG	6 cut(s)	205, 567, 738, 843, 1010, 1539
HpySE526I	ACGT	3 cut(s)	619, 1036, 1573
Hsp92I	GRCGYC	2 cut(s)	1124, 1199
Hsp92II	CATG	3 cut(s)	485, 1470, 1708
HspAI	GCGC	1 cut(s)	293
KflI	GGGWCCC	1 cut(s)	1332
Ksp22I	TGATCA	4 cut(s)	163, 811, 901, 1504
Kzo9I	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
LguI	GCTCTTC	1 cut(s)	429
LmnI	GCTCC	3 cut(s)	301, 822, 1152
LweI	GCATC	3 cut(s)	550, 1243, 1466
MaeI	CTAG	8 cut(s)	110, 269, 321, 1110, 1337, 1362, 1659, 1682
MaeII	ACGT	3 cut(s)	619, 1036, 1573
MaeIII	GTNAC	3 cut(s)	59, 620, 1673
MalI	GATC	9 cut(s)	122, 165, 181, 398, 699, 813, 903, 1186, 1506
MbiI	CCGCTC	1 cut(s)	825
MboI	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
MfeI	CAATTG	1 cut(s)	87
MflI	RGATCY	2 cut(s)	179, 1184
MhlI	GDGCHC	4 cut(s)	306, 678, 1009, 1573
MlsI	TGGCCA	2 cut(s)	794, 1295
MluCI	AATT	9 cut(s)	87, 381, 388, 866, 939, 1096, 1204, 1241, 1391
MluNI	TGGCCA	2 cut(s)	794, 1295
MlyI	GAGTC	4 cut(s)	913, 1166, 1449, 1572
MmeI	TCCRAC	3 cut(s)	286, 393, 1230
Mox20I	TGGCCA	2 cut(s)	794, 1295
MscI	TGGCCA	2 cut(s)	794, 1295
MseI	TTAA	2 cut(s)	284, 1688
MslI	CAYNNNNRTG	1 cut(s)	1311
Msp20I	TGGCCA	2 cut(s)	794, 1295
MspA1I	CMGCKG	1 cut(s)	1355
MspI	CCGG	3 cut(s)	22, 1121, 1150
MspR9I	CCNGG	2 cut(s)	896, 1622
MunI	CAATTG	1 cut(s)	87
MvaI	CCWGG	2 cut(s)	896, 1622
MvnI	CGCG	2 cut(s)	966, 1139
NdeI	CATATG	1 cut(s)	366
NdeII	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
NlaIII	CATG	3 cut(s)	485, 1470, 1708
NlaIV	GGNNCC	6 cut(s)	150, 1166, 1211, 1333, 1334, 1418
NmuCI	GTSAC	1 cut(s)	1673
NruI	TCGCGA	1 cut(s)	1139
NspI	RCATGY	1 cut(s)	485
NspV	TTCGAA	1 cut(s)	463
PagI	TCATGA	1 cut(s)	1704
PaqCI	CACCTGC	1 cut(s)	16
PceI	AGGCCT	1 cut(s)	1640
PciSI	GCTCTTC	1 cut(s)	429
PcsI	WCGNNNNNNNCGW	2 cut(s)	235, 1582
PfeI	GAWTC	6 cut(s)	101, 140, 170, 526, 1375, 1617
PleI	GAGTC	4 cut(s)	913, 1165, 1448, 1572
PmaCI	CACGTG	1 cut(s)	1037
PmlI	CACGTG	1 cut(s)	1037
PpsI	GAGTC	4 cut(s)	913, 1165, 1448, 1572
Ppu21I	YACGTR	1 cut(s)	1037
PpuMI	RGGWCCY	2 cut(s)	149, 1332
Psp124BI	GAGCTC	1 cut(s)	306
Psp1406I	AACGTT	1 cut(s)	619
Psp5II	RGGWCCY	2 cut(s)	149, 1332
Psp6I	CCWGG	2 cut(s)	894, 1620
PspCI	CACGTG	1 cut(s)	1037
PspGI	CCWGG	2 cut(s)	894, 1620
PspN4I	GGNNCC	6 cut(s)	150, 1166, 1211, 1333, 1334, 1418
PspPI	GGNCC	4 cut(s)	149, 1209, 1332, 1417
PspPPI	RGGWCCY	2 cut(s)	149, 1332
PstI	CTGCAG	3 cut(s)	927, 1648, 1762
PstNI	CAGNNNCTG	3 cut(s)	563, 790, 922
PsuI	RGATCY	2 cut(s)	179, 1184
PvuII	CAGCTG	1 cut(s)	1355
RruI	TCGCGA	1 cut(s)	1139
RsaI	GTAC	3 cut(s)	195, 989, 1663
RsaNI	GTAC	3 cut(s)	194, 988, 1662
RseI	CAYNNNNRTG	1 cut(s)	1311
SacI	GAGCTC	1 cut(s)	306
SalI	GTCGAC	1 cut(s)	1575
SapI	GCTCTTC	1 cut(s)	429
SaqAI	TTAA	2 cut(s)	284, 1688
Sau3AI	GATC	9 cut(s)	120, 163, 179, 396, 697, 811, 901, 1184, 1504
Sau96I	GGNCC	4 cut(s)	149, 1209, 1332, 1417
ScaI	AGTACT	1 cut(s)	989
SchI	GAGTC	4 cut(s)	913, 1166, 1449, 1572
ScrFI	CCNGG	2 cut(s)	896, 1622
SduI	GDGCHC	4 cut(s)	306, 678, 1009, 1573
SfaNI	GCATC	3 cut(s)	550, 1243, 1466
SfcI	CTRYAG	4 cut(s)	779, 923, 1644, 1758
SfuI	TTCGAA	1 cut(s)	463
SgrAI	CRCCGGYG	1 cut(s)	1120
SinI	GGWCC	3 cut(s)	149, 1209, 1332
SmiMI	CAYNNNNRTG	1 cut(s)	1311
SmlI	CTYRAG	2 cut(s)	683, 1769
SmoI	CTYRAG	2 cut(s)	683, 1769
SpeI	ACTAGT	1 cut(s)	1681
Sse9I	AATT	9 cut(s)	87, 381, 388, 866, 939, 1096, 1204, 1241, 1391
SseBI	AGGCCT	1 cut(s)	1640
SsiI	CCGC	7 cut(s)	727, 825, 959, 966, 1047, 1106, 1529
SspI	AATATT	1 cut(s)	667
SspMI	CTAG	8 cut(s)	110, 269, 321, 1110, 1337, 1362, 1659, 1682
SstI	GAGCTC	1 cut(s)	306
StuI	AGGCCT	1 cut(s)	1640
StyD4I	CCNGG	2 cut(s)	894, 1620
StyI	CCWWGG	1 cut(s)	1590
TaaI	ACNGT	1 cut(s)	591
TaiI	ACGT	3 cut(s)	622, 1039, 1576
TaqI	TCGA	7 cut(s)	143, 306, 463, 502, 672, 1202, 1576
TaqII	GACCGA	1 cut(s)	1733
TasI	AATT	9 cut(s)	87, 381, 388, 866, 939, 1096, 1204, 1241, 1391
TatI	WGTACW	1 cut(s)	987
TauI	GCSGC	6 cut(s)	730, 962, 969, 1049, 1108, 1532
TfiI	GAWTC	6 cut(s)	101, 140, 170, 526, 1375, 1617
Tru1I	TTAA	2 cut(s)	284, 1688
Tru9I	TTAA	2 cut(s)	284, 1688
TscAI	CASTG	5 cut(s)	58, 431, 635, 795, 882
TseFI	GTSAC	1 cut(s)	1673
Tsp45I	GTSAC	1 cut(s)	1673
TspDTI	ATGAA	9 cut(s)	339, 471, 566, 1278, 1404, 1419, 1499, 1574, 1803
TspGWI	ACGGA	2 cut(s)	536, 1556
TspRI	CASTG	5 cut(s)	58, 431, 635, 795, 882
VneI	GTGCAC	1 cut(s)	1569
VpaK11BI	GGWCC	3 cut(s)	149, 1209, 1332
XagI	CCTNNNNNAGG	1 cut(s)	1340
XapI	RAATTY	3 cut(s)	388, 866, 939
XceI	RCATGY	1 cut(s)	485
XmiI	GTMKAC	1 cut(s)	1576
XspI	CTAG	8 cut(s)	110, 269, 321, 1110, 1337, 1362, 1659, 1682
ZrmI	AGTACT	1 cut(s)	989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.