Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005715

Physical Location & Seq

Genomic Coordinates Forward (+)

43071748 .. 43073583

Gene Structure 1836 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G525800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGGAAGCCAATCATGAGGAAAAACGCAACGCTGCCTTGAAGAGAGCCCTTCTCATACTAAGCTGCGTATTCTTATCAATAGGCGCATGCGGAGGCCCTTTGATAATGCGCCTCTACTTCATCCATGGAGGTAAACGTGTCTGGCTTTCCAGCTGGCTCGAAACCGGCGGCTGGCCAATCATCTTCATCCCCATAGCCCTAGCTTATTACCATCGCCGCACCACTGAAGGCCCTTCAACAAAACTCTTCTTCATGAAGCTCCCGCTCTTCATAGCCTCCGCCGTCATCGGCCTCCTCACCGGCCTCGACGACTACCTCTACGCCTACGGCGTGGCCCGCCTTCCTGTCTCCACGGCAGCCCTAATCACCGCTGCCCATCTGGTTTTCACTGCCCTTTTTGCATTTCTTCTCGTGAAGCAGAAGTTCACTTCTTACTCTATAAACTGCGTCTTCTTATTGACTATTGGAGCGGCTGTTTTGGGGCTGAACACTAGCGCTGATCGGCCAAAGGGTGAGTCGGATAAGCAGTATATTGCCGGGTTTATGATGACGTTGTCGTCAGCGGCTTTGTACGGGTTTGTGTTGCCGTTGGTGGAGTTGACATACAAGAAGGCCAAGCAGACCATTACTTATGCTTTGGTTCTTGAGATTCAATTGGTTATGTGTTTGTTTGCTACCATTTTCTGCACCGTGGGGATGCTTATCAACAATGACTTCAAGGTTATTCCAAGAGAAGCAAGAAACTTCGAGCTTGGGGAAAGAAGATACTATGTGGTGCTTGTATTTAGTGCAATAGTTTGGCAGGGTTTCTTTCTGGGAGCCATAGGAATTATCTTCTGTGCCTCATCCTTGCTCTCTGGTATTGTAATTGCTGTTCTGCTCCCAGTTACAGAGATCCTAGCTGTTATTTTTTACCACGAGAAGTTTCAAGCAGAAAAGGGGGTTGCTCTTGCACTCTCTCTGTGGGGTTTTGTCTCATATTTCTATGGGGAGAGAAAATACAGCAAGCAAAAAGAAAGTGAAATGAAAAATGAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005337 GO:0005345 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006863 GO:0008150 GO:0009914 GO:0010184 GO:0010817 GO:0015205 GO:0015211 GO:0015851 GO:0015858 GO:0015860 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071702 GO:0071705 GO:0071944 GO:0072530 GO:1901264 GO:1901505 GO:1901642 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUNUT

Protein Analysis

345

Amino Acids

38.43

Weight (kDa)

9.15

Isoelectric Point (pI)

32.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28220 AT1G28230
fragaria_vesca	FvH4_5g36040 FvH4_5g36060
malus_domestica	MD00G1135600.v1.1 MD15G1379500.v1.1
prunus_persica	Prupe.1G525600_v2.0.a1 Prupe.1G525800_v2.0.a1
pyrus_communis	pycom08g16430 pycom15g33980 pycom15g34010
rosa_chinensis	RchiOBHm_Chr7g0237771 RchiOBHm_Chr7g0237851
rosa_laevigata	RLG00000000962 RLG00000000968
rosa_multiflora	Rmu_ssc0000067.1_g000004 Rmu_ssc0000067.1_g000031
rosa_roxburghii	Rroxscaffold_3G00223710 Rroxscaffold_3G00223760
rosa_rugosa	Rorug07G0308600
rosa_samantha	Rh7AG464000 Rh7BG434100 Rh7CG481000 Rh7CG481500 Rh7DG449900 Rh7DG450200
rosa_wichuraiana	Rw7G038390 Rw7G038400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	556
AccBSI	CCGCTC	2 cut(s)	265, 470
AciI	CCGC	9 cut(s)	90, 168, 217, 263, 279, 337, 369, 470, 563
AclWI	GGATC	1 cut(s)	889
AcoI	YGGCCR	2 cut(s)	173, 503
AcuI	CTGAAG	1 cut(s)	246
AfaI	GTAC	1 cut(s)	572
AfeI	AGCGCT	1 cut(s)	496
AfiI	CCNNNNNNNGG	1 cut(s)	171
AflIII	ACRYGT	1 cut(s)	136
AgsI	TTSAA	5 cut(s)	40, 237, 653, 718, 929
AluBI	AGCT	6 cut(s)	63, 153, 203, 259, 751, 902
AluI	AGCT	6 cut(s)	63, 153, 203, 259, 751, 902
Alw26I	GTCTC	2 cut(s)	352, 979
AlwI	GGATC	1 cut(s)	889
Aor51HI	AGCGCT	1 cut(s)	496
AoxI	GGCC	8 cut(s)	94, 173, 229, 289, 301, 333, 503, 612
ApeKI	GCWGC	4 cut(s)	32, 63, 356, 371
ArsI	GACNNNNNNTTYG	2 cut(s)	500, 532
AspLEI	GCGC	3 cut(s)	86, 111, 497
AspS9I	GGNCC	3 cut(s)	95, 230, 334
AsuC2I	CCSGG	1 cut(s)	538
AsuHPI	GGTGA	3 cut(s)	289, 358, 524
BalI	TGGCCA	1 cut(s)	175
BanII	GRGCYC	1 cut(s)	49
BauI	CACGAG	2 cut(s)	410, 917
BbsI	GAAGAC	1 cut(s)	442
BbvI	GCAGC	4 cut(s)	19, 50, 358, 368
BccI	CCATC	2 cut(s)	219, 384
BceAI	ACGGC	4 cut(s)	266, 343, 369, 571
BcnI	CCSGG	1 cut(s)	538
BcoDI	GTCTC	2 cut(s)	352, 979
BfaI	CTAG	3 cut(s)	200, 492, 899
BfoI	RGCGCY	1 cut(s)	498
BisI	GCNGC	8 cut(s)	33, 64, 169, 217, 357, 372, 471, 564
BlsI	GCNGC	8 cut(s)	34, 65, 170, 218, 358, 373, 472, 565
Bme1390I	CCNGG	1 cut(s)	538
BmgT120I	GGNCC	3 cut(s)	95, 230, 334
BmiI	GGNNCC	1 cut(s)	820
BmrFI	CCNGG	1 cut(s)	538
BmrI	ACTGGG	1 cut(s)	878
BmsI	GCATC	1 cut(s)	687
BmuI	ACTGGG	1 cut(s)	878
BpiI	GAAGAC	1 cut(s)	442
BplI	GAGNNNNNCTC	2 cut(s)	36, 68
BpuEI	CTTGAG	1 cut(s)	665
BpuMI	CCSGG	1 cut(s)	538
BsaBI	GATNNNNATC	1 cut(s)	701
BsaJI	CCNNGG	3 cut(s)	124, 351, 690
BsaXI	ACNNNNNCTCC	2 cut(s)	459, 489
Bsc4I	CCNNNNNNNGG	1 cut(s)	171
Bse118I	RCCGGY	2 cut(s)	164, 299
Bse1I	ACTGG	1 cut(s)	884
Bse8I	GATNNNNATC	1 cut(s)	701
BseDI	CCNNGG	3 cut(s)	124, 351, 690
BseGI	GGATG	4 cut(s)	120, 186, 702, 845
BseJI	GATNNNNATC	1 cut(s)	701
BseLI	CCNNNNNNNGG	1 cut(s)	171
BseNI	ACTGG	1 cut(s)	884
BseRI	GAGGAG	1 cut(s)	284
BseXI	GCAGC	4 cut(s)	19, 50, 358, 368
BsgI	GTGCAG	1 cut(s)	670
BshFI	GGCC	8 cut(s)	96, 175, 231, 291, 303, 335, 505, 614
BsiSI	CCGG	3 cut(s)	165, 300, 537
BslI	CCNNNNNNNGG	1 cut(s)	171
BsmAI	GTCTC	2 cut(s)	352, 979
BsnI	GGCC	8 cut(s)	96, 175, 231, 291, 303, 335, 505, 614
Bsp1286I	GDGCHC	1 cut(s)	49
Bsp143I	GATC	2 cut(s)	499, 894
Bsp19I	CCATGG	1 cut(s)	124
BspACI	CCGC	9 cut(s)	90, 168, 217, 263, 279, 337, 369, 470, 563
BspANI	GGCC	8 cut(s)	96, 175, 231, 291, 303, 335, 505, 614
BspHI	TCATGA	2 cut(s)	13, 252
BspLI	GGNNCC	1 cut(s)	820
BspPI	GGATC	1 cut(s)	889
BspQI	GCTCTTC	1 cut(s)	272
BsrBI	CCGCTC	2 cut(s)	265, 470
BsrFI	RCCGGY	2 cut(s)	164, 299
BsrI	ACTGG	1 cut(s)	884
BssAI	RCCGGY	2 cut(s)	164, 299
BssECI	CCNNGG	3 cut(s)	124, 351, 690
BssMI	GATC	2 cut(s)	499, 894
BssSI	CACGAG	2 cut(s)	410, 917
BssT1I	CCWWGG	1 cut(s)	124
Bst2BI	CACGAG	2 cut(s)	410, 917
Bst4CI	ACNGT	1 cut(s)	691
Bst6I	CTCTTC	3 cut(s)	35, 251, 272
BstC8I	GCNNGC	5 cut(s)	88, 155, 173, 337, 1007
BstDEI	CTNAG	1 cut(s)	59
BstDSI	CCRYGG	3 cut(s)	124, 351, 690
BstF5I	GGATG	4 cut(s)	120, 186, 702, 845
BstH2I	RGCGCY	1 cut(s)	498
BstHHI	GCGC	3 cut(s)	86, 111, 497
BstKTI	GATC	2 cut(s)	502, 897
BstMAI	GTCTC	2 cut(s)	352, 979
BstMBI	GATC	2 cut(s)	499, 894
BstMWI	GCNNNNNNNGC	2 cut(s)	336, 398
BstNSI	RCATGY	1 cut(s)	90
BstSCI	CCNGG	1 cut(s)	536
BstV1I	GCAGC	4 cut(s)	19, 50, 358, 368
BstV2I	GAAGAC	1 cut(s)	442
BstX2I	RGATCY	1 cut(s)	894
BstYI	RGATCY	1 cut(s)	894
BsuRI	GGCC	8 cut(s)	96, 175, 231, 291, 303, 335, 505, 614
BtgI	CCRYGG	3 cut(s)	124, 351, 690
BtgZI	GCGATG	1 cut(s)	197
BtsCI	GGATG	4 cut(s)	120, 186, 702, 845
BtsI	GCAGTG	1 cut(s)	387
BtsIMutI	CAGTG	2 cut(s)	222, 387
Cac8I	GCNNGC	5 cut(s)	88, 155, 173, 337, 1007
CciI	TCATGA	2 cut(s)	13, 252
CfoI	GCGC	3 cut(s)	86, 111, 497
Cfr10I	RCCGGY	2 cut(s)	164, 299
Cfr13I	GGNCC	3 cut(s)	95, 230, 334
CseI	GACGC	1 cut(s)	436
Csp6I	GTAC	1 cut(s)	571
CviAII	CATG	4 cut(s)	14, 87, 125, 253
CviQI	GTAC	1 cut(s)	571
DdeI	CTNAG	1 cut(s)	59
DpnI	GATC	2 cut(s)	501, 896
DpnII	GATC	2 cut(s)	499, 894
DrdI	GACNNNNNNGTC	1 cut(s)	556
DseDI	GACNNNNNNGTC	1 cut(s)	556
EaeI	YGGCCR	2 cut(s)	173, 503
Eam1104I	CTCTTC	3 cut(s)	35, 251, 272
EarI	CTCTTC	3 cut(s)	35, 251, 272
EciI	GGCGGA	1 cut(s)	268
Eco130I	CCWWGG	1 cut(s)	124
Eco24I	GRGCYC	1 cut(s)	49
Eco47III	AGCGCT	1 cut(s)	496
Eco57I	CTGAAG	1 cut(s)	246
EcoO109I	RGGNCCY	2 cut(s)	95, 230
EcoT14I	CCWWGG	1 cut(s)	124
EcoT38I	GRGCYC	1 cut(s)	49
ErhI	CCWWGG	1 cut(s)	124
FaeI	CATG	4 cut(s)	17, 90, 128, 256
FatI	CATG	4 cut(s)	13, 86, 124, 252
FauI	CCCGC	2 cut(s)	270, 344
Fnu4HI	GCNGC	8 cut(s)	33, 64, 169, 217, 357, 372, 471, 564
FokI	GGATG	4 cut(s)	107, 173, 709, 832
FriOI	GRGCYC	1 cut(s)	49
Fsp4HI	GCNGC	8 cut(s)	33, 64, 169, 217, 357, 372, 471, 564
FspBI	CTAG	3 cut(s)	200, 492, 899
GlaI	GCGC	3 cut(s)	85, 110, 496
GluI	GCNGC	8 cut(s)	33, 64, 169, 217, 357, 372, 471, 564
HaeII	RGCGCY	1 cut(s)	498
HaeIII	GGCC	8 cut(s)	96, 175, 231, 291, 303, 335, 505, 614
HapII	CCGG	3 cut(s)	165, 300, 537
HgaI	GACGC	1 cut(s)	436
HhaI	GCGC	3 cut(s)	86, 111, 497
Hin1II	CATG	4 cut(s)	17, 90, 128, 256
Hin6I	GCGC	3 cut(s)	84, 109, 495
HinP1I	GCGC	3 cut(s)	84, 109, 495
HincII	GTYRAC	1 cut(s)	600
HindII	GTYRAC	1 cut(s)	600
HinfI	GANTC	2 cut(s)	515, 649
HpaII	CCGG	3 cut(s)	165, 300, 537
HphI	GGTGA	3 cut(s)	289, 358, 524
Hpy166II	GTNNAC	3 cut(s)	134, 426, 600
Hpy188I	TCNGA	1 cut(s)	520
Hpy188III	TCNNGA	4 cut(s)	14, 253, 412, 644
Hpy8I	GTNNAC	3 cut(s)	134, 426, 600
Hpy99I	CGWCG	1 cut(s)	311
HpyAV	CCTTC	5 cut(s)	59, 221, 243, 350, 604
HpyCH4III	ACNGT	1 cut(s)	691
HpyCH4IV	ACGT	2 cut(s)	136, 551
HpyCH4V	TGCA	4 cut(s)	401, 687, 791, 953
HpyF10VI	GCNNNNNNNGC	2 cut(s)	336, 398
HpyF3I	CTNAG	1 cut(s)	59
HpySE526I	ACGT	2 cut(s)	136, 551
Hsp92II	CATG	4 cut(s)	17, 90, 128, 256
HspAI	GCGC	3 cut(s)	84, 109, 495
Kzo9I	GATC	2 cut(s)	499, 894
LguI	GCTCTTC	1 cut(s)	272
LmnI	GCTCC	4 cut(s)	264, 467, 818, 885
Lsp1109I	GCAGC	4 cut(s)	19, 50, 358, 368
LweI	GCATC	1 cut(s)	687
MaeI	CTAG	3 cut(s)	200, 492, 899
MaeII	ACGT	2 cut(s)	136, 551
MaeIII	GTNAC	1 cut(s)	886
MalI	GATC	2 cut(s)	501, 896
MbiI	CCGCTC	2 cut(s)	265, 470
MboI	GATC	2 cut(s)	499, 894
MboII	GAAGA	9 cut(s)	52, 175, 238, 241, 259, 398, 442, 774, 826
MfeI	CAATTG	1 cut(s)	653
MflI	RGATCY	1 cut(s)	894
MhlI	GDGCHC	1 cut(s)	49
MlsI	TGGCCA	1 cut(s)	175
MluCI	AATT	3 cut(s)	653, 828, 867
MluNI	TGGCCA	1 cut(s)	175
MlyI	GAGTC	1 cut(s)	524
MmeI	TCCRAC	1 cut(s)	498
Mox20I	TGGCCA	1 cut(s)	175
MscI	TGGCCA	1 cut(s)	175
Msp20I	TGGCCA	1 cut(s)	175
MspA1I	CMGCKG	3 cut(s)	153, 371, 563
MspI	CCGG	3 cut(s)	165, 300, 537
MspR9I	CCNGG	1 cut(s)	538
MunI	CAATTG	1 cut(s)	653
MwoI	GCNNNNNNNGC	2 cut(s)	336, 398
NciI	CCSGG	1 cut(s)	538
NcoI	CCATGG	1 cut(s)	124
NdeII	GATC	2 cut(s)	499, 894
NlaIII	CATG	4 cut(s)	17, 90, 128, 256
NlaIV	GGNNCC	1 cut(s)	820
NspI	RCATGY	1 cut(s)	90
PaeI	GCATGC	1 cut(s)	90
PagI	TCATGA	2 cut(s)	13, 252
PciSI	GCTCTTC	1 cut(s)	272
PcsI	WCGNNNNNNNCGW	1 cut(s)	327
PfeI	GAWTC	1 cut(s)	649
PflFI	GACNNNGTC	1 cut(s)	553
PkrI	GCNGC	8 cut(s)	34, 65, 170, 218, 358, 373, 472, 565
PleI	GAGTC	1 cut(s)	523
PpsI	GAGTC	1 cut(s)	523
PspN4I	GGNNCC	1 cut(s)	820
PspPI	GGNCC	3 cut(s)	95, 230, 334
PsrI	GAACNNNNNNTAC	2 cut(s)	858, 890
PsuI	RGATCY	1 cut(s)	894
PsyI	GACNNNGTC	1 cut(s)	553
PvuII	CAGCTG	1 cut(s)	153
RsaI	GTAC	1 cut(s)	572
RsaNI	GTAC	1 cut(s)	571
SapI	GCTCTTC	1 cut(s)	272
SatI	GCNGC	8 cut(s)	33, 64, 169, 217, 357, 372, 471, 564
Sau3AI	GATC	2 cut(s)	499, 894
Sau96I	GGNCC	3 cut(s)	95, 230, 334
SchI	GAGTC	1 cut(s)	524
ScrFI	CCNGG	1 cut(s)	538
SduI	GDGCHC	1 cut(s)	49
SfaNI	GCATC	1 cut(s)	687
SmlI	CTYRAG	1 cut(s)	644
SmoI	CTYRAG	1 cut(s)	644
SphI	GCATGC	1 cut(s)	90
Sse9I	AATT	3 cut(s)	653, 828, 867
SsiI	CCGC	9 cut(s)	90, 168, 217, 263, 279, 337, 369, 470, 563
SspMI	CTAG	3 cut(s)	200, 492, 899
StyD4I	CCNGG	1 cut(s)	536
StyI	CCWWGG	1 cut(s)	124
TaaI	ACNGT	1 cut(s)	691
TaiI	ACGT	2 cut(s)	139, 554
TaqI	TCGA	3 cut(s)	159, 306, 747
TasI	AATT	3 cut(s)	653, 828, 867
TauI	GCSGC	4 cut(s)	171, 219, 473, 566
TfiI	GAWTC	1 cut(s)	649
TscAI	CASTG	2 cut(s)	229, 394
TseI	GCWGC	4 cut(s)	32, 63, 356, 371
TspDTI	ATGAA	5 cut(s)	109, 175, 241, 259, 269
TspRI	CASTG	2 cut(s)	229, 394
Tth111I	GACNNNGTC	1 cut(s)	553
XceI	RCATGY	1 cut(s)	90
XspI	CTAG	3 cut(s)	200, 492, 899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.