Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G27460 |
| fragaria_vesca | FvH4_5g36010 FvH4_5g36010 FvH4_5g36010 FvH4_5g36010 |
| malus_domestica | MD00G1136100.v1.1 MD15G1379700.v1.1 |
| prunus_persica | Prupe.1G525900_v2.0.a1 |
| pyrus_communis | pycom15g34030 |
| rosa_chinensis | RchiOBHm_Chr1g0327731 RchiOBHm_Chr7g0237751 |
| rosa_laevigata | RLG00000000970 RLG00000029974 |
| rosa_multiflora | Rmu_ssc0000067.1_g000033 |
| rosa_roxburghii | Rroxscaffold_3G00223780 |
| rosa_rugosa | Rorug01G0070100 Rorug07G0307800 |
| rosa_samantha | Rh1AG086500 Rh1CG084100 Rh1DG091000 Rh1DG091100 Rh4AG105300 Rh4CG113800 Rh7AG463800 Rh7BG433900 Rh7CG480800 Rh7DG449700 |
| rosa_wichuraiana | Rw0G013090 Rw7G038370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1173 |
| AarI | CACCTGC | 1 cut(s) | 1058 |
| AatII | GACGTC | 1 cut(s) | 915 |
| Acc36I | ACCTGC | 1 cut(s) | 1058 |
| Acc65I | GGTACC | 1 cut(s) | 943 |
| AccB1I | GGYRCC | 1 cut(s) | 943 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1375 |
| AccI | GTMKAC | 2 cut(s) | 204, 764 |
| AccII | CGCG | 2 cut(s) | 56, 210 |
| AciI | CCGC | 6 cut(s) | 208, 210, 856, 941, 1102, 1158 |
| AclWI | GGATC | 1 cut(s) | 1180 |
| AcsI | RAATTY | 2 cut(s) | 409, 954 |
| AcuI | CTGAAG | 4 cut(s) | 414, 527, 681, 852 |
| AcyI | GRCGYC | 1 cut(s) | 912 |
| AfaI | GTAC | 3 cut(s) | 945, 964, 1061 |
| AfeI | AGCGCT | 1 cut(s) | 272 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 825, 826, 1056, 1375 |
| AflII | CTTAAG | 1 cut(s) | 1454 |
| AflIII | ACRYGT | 1 cut(s) | 578 |
| AgeI | ACCGGT | 1 cut(s) | 26 |
| AgsI | TTSAA | 8 cut(s) | 116, 254, 262, 388, 429, 614, 1235, 1511 |
| AjnI | CCWGG | 1 cut(s) | 946 |
| Alw21I | GWGCWC | 3 cut(s) | 44, 138, 758 |
| Alw26I | GTCTC | 3 cut(s) | 28, 226, 1487 |
| AlwI | GGATC | 1 cut(s) | 1180 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1445 |
| Aor51HI | AGCGCT | 1 cut(s) | 272 |
| AoxI | GGCC | 4 cut(s) | 793, 816, 1280, 1302 |
| ApeKI | GCWGC | 3 cut(s) | 79, 416, 437 |
| ApoI | RAATTY | 2 cut(s) | 409, 954 |
| AsiGI | ACCGGT | 1 cut(s) | 26 |
| Asp718I | GGTACC | 1 cut(s) | 943 |
| AspLEI | GCGC | 3 cut(s) | 123, 179, 273 |
| AspS9I | GGNCC | 1 cut(s) | 817 |
| AsuC2I | CCSGG | 3 cut(s) | 168, 336, 688 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 350, 736, 1006, 1016 |
| AsuII | TTCGAA | 2 cut(s) | 1069, 1320 |
| BaeGI | GKGCMC | 2 cut(s) | 578, 600 |
| BanI | GGYRCC | 1 cut(s) | 943 |
| BanII | GRGCYC | 3 cut(s) | 21, 138, 539 |
| BbsI | GAAGAC | 2 cut(s) | 96, 437 |
| Bbv12I | GWGCWC | 3 cut(s) | 44, 138, 758 |
| BbvI | GCAGC | 3 cut(s) | 91, 403, 424 |
| BccI | CCATC | 7 cut(s) | 298, 700, 744, 1194, 1291, 1456, 1477 |
| BciT130I | CCWGG | 1 cut(s) | 948 |
| BclI | TGATCA | 1 cut(s) | 340 |
| BcnI | CCSGG | 3 cut(s) | 168, 336, 688 |
| BcoDI | GTCTC | 3 cut(s) | 28, 226, 1487 |
| BfaI | CTAG | 5 cut(s) | 9, 296, 933, 1001, 1088 |
| BfoI | RGCGCY | 1 cut(s) | 274 |
| BfrI | CTTAAG | 1 cut(s) | 1454 |
| BfuAI | ACCTGC | 1 cut(s) | 1058 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 815 |
| BisI | GCNGC | 4 cut(s) | 80, 211, 417, 438 |
| BlsI | GCNGC | 4 cut(s) | 81, 212, 418, 439 |
| Bme1390I | CCNGG | 4 cut(s) | 168, 336, 688, 948 |
| BmgT120I | GGNCC | 1 cut(s) | 817 |
| BmiI | GGNNCC | 1 cut(s) | 945 |
| BmrFI | CCNGG | 4 cut(s) | 168, 336, 688, 948 |
| BmrI | ACTGGG | 1 cut(s) | 104 |
| BmsI | GCATC | 3 cut(s) | 492, 1144, 1230 |
| BmuI | ACTGGG | 1 cut(s) | 104 |
| BpiI | GAAGAC | 2 cut(s) | 96, 437 |
| BpmI | CTGGAG | 1 cut(s) | 272 |
| Bpu14I | TTCGAA | 2 cut(s) | 1069, 1320 |
| BpuEI | CTTGAG | 1 cut(s) | 122 |
| BpuMI | CCSGG | 3 cut(s) | 168, 336, 688 |
| BsaHI | GRCGYC | 1 cut(s) | 912 |
| BsaI | GGTCTC | 1 cut(s) | 226 |
| BsaJI | CCNNGG | 4 cut(s) | 208, 687, 859, 947 |
| BsaWI | WCCGGW | 1 cut(s) | 26 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1028, 1058 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 825, 826, 1056, 1375 |
| Bse118I | RCCGGY | 1 cut(s) | 26 |
| Bse1I | ACTGG | 2 cut(s) | 110, 810 |
| Bse3DI | GCAATG | 1 cut(s) | 1145 |
| BseBI | CCWGG | 1 cut(s) | 948 |
| BseDI | CCNNGG | 4 cut(s) | 208, 687, 859, 947 |
| BseGI | GGATG | 7 cut(s) | 309, 541, 669, 755, 1205, 1449, 1492 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 825, 826, 1056, 1375 |
| BseMI | GCAATG | 1 cut(s) | 1145 |
| BseMII | CTCAG | 4 cut(s) | 23, 75, 1116, 1445 |
| BseNI | ACTGG | 2 cut(s) | 110, 810 |
| BseRI | GAGGAG | 1 cut(s) | 88 |
| BseSI | GKGCMC | 2 cut(s) | 578, 600 |
| BseXI | GCAGC | 3 cut(s) | 91, 403, 424 |
| BsgI | GTGCAG | 2 cut(s) | 1124, 1403 |
| Bsh1236I | CGCG | 2 cut(s) | 56, 210 |
| Bsh1285I | CGRYCG | 1 cut(s) | 208 |
| BshFI | GGCC | 4 cut(s) | 795, 818, 1282, 1304 |
| BshNI | GGYRCC | 1 cut(s) | 943 |
| BshTI | ACCGGT | 1 cut(s) | 26 |
| BsiEI | CGRYCG | 1 cut(s) | 208 |
| BsiHKAI | GWGCWC | 3 cut(s) | 44, 138, 758 |
| BsiSI | CCGG | 4 cut(s) | 27, 167, 335, 687 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 825, 826, 1056, 1375 |
| BsmAI | GTCTC | 3 cut(s) | 28, 226, 1487 |
| BsmBI | CGTCTC | 1 cut(s) | 28 |
| BsmI | GAATGC | 1 cut(s) | 673 |
| BsnI | GGCC | 4 cut(s) | 795, 818, 1282, 1304 |
| Bso31I | GGTCTC | 1 cut(s) | 226 |
| Bsp119I | TTCGAA | 2 cut(s) | 1069, 1320 |
| Bsp1286I | GDGCHC | 7 cut(s) | 21, 44, 138, 539, 578, 600, 758 |
| Bsp143I | GATC | 3 cut(s) | 340, 1185, 1436 |
| Bsp68I | TCGCGA | 1 cut(s) | 56 |
| BspACI | CCGC | 6 cut(s) | 208, 210, 856, 941, 1102, 1158 |
| BspANI | GGCC | 4 cut(s) | 795, 818, 1282, 1304 |
| BspCNI | CTCAG | 4 cut(s) | 24, 74, 1117, 1444 |
| BspFNI | CGCG | 2 cut(s) | 56, 210 |
| BspLI | GGNNCC | 1 cut(s) | 945 |
| BspMI | ACCTGC | 1 cut(s) | 1058 |
| BspPI | GGATC | 1 cut(s) | 1180 |
| BspQI | GCTCTTC | 2 cut(s) | 26, 103 |
| BspT104I | TTCGAA | 2 cut(s) | 1069, 1320 |
| BspT107I | GGYRCC | 1 cut(s) | 943 |
| BspTI | CTTAAG | 1 cut(s) | 1454 |
| BspTNI | GGTCTC | 1 cut(s) | 226 |
| BsrDI | GCAATG | 1 cut(s) | 1145 |
| BsrFI | RCCGGY | 1 cut(s) | 26 |
| BsrI | ACTGG | 2 cut(s) | 110, 810 |
| BssAI | RCCGGY | 1 cut(s) | 26 |
| BssECI | CCNNGG | 4 cut(s) | 208, 687, 859, 947 |
| BssMI | GATC | 3 cut(s) | 340, 1185, 1436 |
| BssNI | GRCGYC | 1 cut(s) | 912 |
| BssT1I | CCWWGG | 1 cut(s) | 859 |
| Bst2UI | CCWGG | 1 cut(s) | 948 |
| Bst4CI | ACNGT | 5 cut(s) | 39, 187, 330, 643, 984 |
| Bst6I | CTCTTC | 5 cut(s) | 26, 103, 390, 456, 828 |
| BstACI | GRCGYC | 1 cut(s) | 912 |
| BstAFI | CTTAAG | 1 cut(s) | 1454 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1147 |
| BstBI | TTCGAA | 2 cut(s) | 1069, 1320 |
| BstC8I | GCNNGC | 1 cut(s) | 793 |
| BstDEI | CTNAG | 7 cut(s) | 32, 61, 267, 821, 1125, 1412, 1431 |
| BstDSI | CCRYGG | 1 cut(s) | 208 |
| BstEII | GGTNACC | 1 cut(s) | 1160 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1054 |
| BstF5I | GGATG | 7 cut(s) | 309, 541, 669, 755, 1205, 1449, 1492 |
| BstFNI | CGCG | 2 cut(s) | 56, 210 |
| BstH2I | RGCGCY | 1 cut(s) | 274 |
| BstHHI | GCGC | 3 cut(s) | 123, 179, 273 |
| BstKTI | GATC | 3 cut(s) | 343, 1188, 1439 |
| BstMAI | GTCTC | 3 cut(s) | 28, 226, 1487 |
| BstMBI | GATC | 3 cut(s) | 340, 1185, 1436 |
| BstMCI | CGRYCG | 1 cut(s) | 208 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 88, 422, 815, 938, 1147, 1235, 1417 |
| BstNI | CCWGG | 1 cut(s) | 948 |
| BstNSI | RCATGY | 4 cut(s) | 582, 675, 976, 1102 |
| BstPI | GGTNACC | 1 cut(s) | 1160 |
| BstSCI | CCNGG | 4 cut(s) | 166, 334, 686, 946 |
| BstSLI | GKGCMC | 2 cut(s) | 578, 600 |
| BstUI | CGCG | 2 cut(s) | 56, 210 |
| BstV1I | GCAGC | 3 cut(s) | 91, 403, 424 |
| BstV2I | GAAGAC | 2 cut(s) | 96, 437 |
| BstX2I | RGATCY | 1 cut(s) | 1185 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 355 |
| BstYI | RGATCY | 1 cut(s) | 1185 |
| BsuRI | GGCC | 4 cut(s) | 795, 818, 1282, 1304 |
| BtgI | CCRYGG | 1 cut(s) | 208 |
| BtgZI | GCGATG | 2 cut(s) | 1253, 1269 |
| BtsCI | GGATG | 7 cut(s) | 309, 541, 669, 755, 1205, 1449, 1492 |
| BtsI | GCAGTG | 1 cut(s) | 420 |
| BtsIMutI | CAGTG | 3 cut(s) | 183, 420, 1413 |
| BtuMI | TCGCGA | 1 cut(s) | 56 |
| BveI | ACCTGC | 1 cut(s) | 1058 |
| Cac8I | GCNNGC | 1 cut(s) | 793 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1445 |
| CfoI | GCGC | 3 cut(s) | 123, 179, 273 |
| Cfr10I | RCCGGY | 1 cut(s) | 26 |
| Cfr13I | GGNCC | 1 cut(s) | 817 |
| Cfr42I | CCGCGG | 1 cut(s) | 211 |
| CseI | GACGC | 1 cut(s) | 1352 |
| Csp6I | GTAC | 3 cut(s) | 944, 963, 1060 |
| CspAI | ACCGGT | 1 cut(s) | 26 |
| CviQI | GTAC | 3 cut(s) | 944, 963, 1060 |
| DdeI | CTNAG | 7 cut(s) | 32, 61, 267, 821, 1125, 1412, 1431 |
| DpnI | GATC | 3 cut(s) | 342, 1187, 1438 |
| DpnII | GATC | 3 cut(s) | 340, 1185, 1436 |
| DraI | TTTAAA | 1 cut(s) | 897 |
| Eam1104I | CTCTTC | 5 cut(s) | 26, 103, 390, 456, 828 |
| EarI | CTCTTC | 5 cut(s) | 26, 103, 390, 456, 828 |
| Ecl136II | GAGCTC | 1 cut(s) | 136 |
| Eco130I | CCWWGG | 1 cut(s) | 859 |
| Eco147I | AGGCCT | 1 cut(s) | 795 |
| Eco24I | GRGCYC | 3 cut(s) | 21, 138, 539 |
| Eco31I | GGTCTC | 1 cut(s) | 226 |
| Eco47III | AGCGCT | 1 cut(s) | 272 |
| Eco53kI | GAGCTC | 1 cut(s) | 136 |
| Eco57I | CTGAAG | 4 cut(s) | 414, 527, 681, 852 |
| Eco91I | GGTNACC | 1 cut(s) | 1160 |
| EcoICRI | GAGCTC | 1 cut(s) | 136 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1054 |
| EcoO65I | GGTNACC | 1 cut(s) | 1160 |
| EcoRI | GAATTC | 1 cut(s) | 954 |
| EcoRII | CCWGG | 1 cut(s) | 946 |
| EcoT14I | CCWWGG | 1 cut(s) | 859 |
| EcoT22I | ATGCAT | 2 cut(s) | 673, 978 |
| EcoT38I | GRGCYC | 3 cut(s) | 21, 138, 539 |
| ErhI | CCWWGG | 1 cut(s) | 859 |
| Esp3I | CGTCTC | 1 cut(s) | 28 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 585, 617, 780, 812 |
| FbaI | TGATCA | 1 cut(s) | 340 |
| FblI | GTMKAC | 2 cut(s) | 204, 764 |
| Fnu4HI | GCNGC | 4 cut(s) | 80, 211, 417, 438 |
| FokI | GGATG | 7 cut(s) | 316, 528, 676, 762, 1212, 1436, 1499 |
| FriOI | GRGCYC | 3 cut(s) | 21, 138, 539 |
| Fsp4HI | GCNGC | 4 cut(s) | 80, 211, 417, 438 |
| FspBI | CTAG | 5 cut(s) | 9, 296, 933, 1001, 1088 |
| GlaI | GCGC | 3 cut(s) | 122, 178, 272 |
| GluI | GCNGC | 4 cut(s) | 80, 211, 417, 438 |
| GsuI | CTGGAG | 1 cut(s) | 272 |
| HaeII | RGCGCY | 1 cut(s) | 274 |
| HaeIII | GGCC | 4 cut(s) | 795, 818, 1282, 1304 |
| HapII | CCGG | 4 cut(s) | 27, 167, 335, 687 |
| HgaI | GACGC | 1 cut(s) | 1352 |
| HhaI | GCGC | 3 cut(s) | 123, 179, 273 |
| Hin1I | GRCGYC | 1 cut(s) | 912 |
| Hin6I | GCGC | 3 cut(s) | 121, 177, 271 |
| HinP1I | GCGC | 3 cut(s) | 121, 177, 271 |
| HincII | GTYRAC | 2 cut(s) | 205, 802 |
| HindII | GTYRAC | 2 cut(s) | 205, 802 |
| HindIII | AAGCTT | 1 cut(s) | 509 |
| HinfI | GANTC | 5 cut(s) | 190, 359, 1043, 1071, 1127 |
| HpaII | CCGG | 4 cut(s) | 27, 167, 335, 687 |
| HphI | GGTGA | 5 cut(s) | 16, 350, 736, 1006, 1016 |
| Hpy166II | GTNNAC | 5 cut(s) | 205, 712, 765, 802, 1047 |
| Hpy188I | TCNGA | 8 cut(s) | 33, 174, 195, 501, 847, 1361, 1434, 1447 |
| Hpy188III | TCNNGA | 6 cut(s) | 55, 139, 230, 259, 289, 661 |
| Hpy8I | GTNNAC | 5 cut(s) | 205, 712, 765, 802, 1047 |
| Hpy99I | CGWCG | 3 cut(s) | 91, 134, 243 |
| HpyAV | CCTTC | 6 cut(s) | 370, 819, 1094, 1190, 1462, 1525 |
| HpyCH4III | ACNGT | 5 cut(s) | 39, 187, 330, 643, 984 |
| HpyCH4IV | ACGT | 1 cut(s) | 912 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 88, 422, 815, 938, 1147, 1235, 1417 |
| HpyF3I | CTNAG | 7 cut(s) | 32, 61, 267, 821, 1125, 1412, 1431 |
| HpySE526I | ACGT | 1 cut(s) | 912 |
| Hsp92I | GRCGYC | 1 cut(s) | 912 |
| HspAI | GCGC | 3 cut(s) | 121, 177, 271 |
| KpnI | GGTACC | 1 cut(s) | 947 |
| Ksp22I | TGATCA | 1 cut(s) | 340 |
| KspI | CCGCGG | 1 cut(s) | 211 |
| Kzo9I | GATC | 3 cut(s) | 340, 1185, 1436 |
| LguI | GCTCTTC | 2 cut(s) | 26, 103 |
| LmnI | GCTCC | 3 cut(s) | 47, 174, 753 |
| Lsp1109I | GCAGC | 3 cut(s) | 91, 403, 424 |
| LweI | GCATC | 3 cut(s) | 492, 1144, 1230 |
| MaeI | CTAG | 5 cut(s) | 9, 296, 933, 1001, 1088 |
| MaeII | ACGT | 1 cut(s) | 912 |
| MaeIII | GTNAC | 1 cut(s) | 1160 |
| MalI | GATC | 3 cut(s) | 342, 1187, 1438 |
| MboI | GATC | 3 cut(s) | 340, 1185, 1436 |
| MboII | GAAGA | 9 cut(s) | 13, 90, 96, 407, 437, 443, 446, 631, 845 |
| MflI | RGATCY | 1 cut(s) | 1185 |
| MhlI | GDGCHC | 7 cut(s) | 21, 44, 138, 539, 578, 600, 758 |
| MluCI | AATT | 6 cut(s) | 409, 584, 954, 967, 1168, 1348 |
| MlyI | GAGTC | 2 cut(s) | 1052, 1136 |
| MmeI | TCCRAC | 3 cut(s) | 152, 336, 727 |
| Mph1103I | ATGCAT | 2 cut(s) | 673, 978 |
| MseI | TTAA | 3 cut(s) | 638, 896, 1455 |
| MslI | CAYNNNNRTG | 2 cut(s) | 371, 462 |
| MspA1I | CMGCKG | 2 cut(s) | 82, 210 |
| MspCI | CTTAAG | 1 cut(s) | 1454 |
| MspI | CCGG | 4 cut(s) | 27, 167, 335, 687 |
| MspR9I | CCNGG | 4 cut(s) | 168, 336, 688, 948 |
| Mva1269I | GAATGC | 1 cut(s) | 673 |
| MvaI | CCWGG | 1 cut(s) | 948 |
| MvnI | CGCG | 2 cut(s) | 56, 210 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 88, 422, 815, 938, 1147, 1235, 1417 |
| NciI | CCSGG | 3 cut(s) | 168, 336, 688 |
| NdeII | GATC | 3 cut(s) | 340, 1185, 1436 |
| NlaIV | GGNNCC | 1 cut(s) | 945 |
| NruI | TCGCGA | 1 cut(s) | 56 |
| NsiI | ATGCAT | 2 cut(s) | 673, 978 |
| NspI | RCATGY | 4 cut(s) | 582, 675, 976, 1102 |
| NspV | TTCGAA | 2 cut(s) | 1069, 1320 |
| PaqCI | CACCTGC | 1 cut(s) | 1058 |
| PceI | AGGCCT | 1 cut(s) | 795 |
| PciI | ACATGT | 1 cut(s) | 578 |
| PciSI | GCTCTTC | 2 cut(s) | 26, 103 |
| PctI | GAATGC | 1 cut(s) | 673 |
| PfeI | GAWTC | 3 cut(s) | 190, 359, 1071 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1375 |
| PinAI | ACCGGT | 1 cut(s) | 26 |
| PkrI | GCNGC | 4 cut(s) | 81, 212, 418, 439 |
| PleI | GAGTC | 2 cut(s) | 1051, 1135 |
| PpsI | GAGTC | 2 cut(s) | 1051, 1135 |
| PscI | ACATGT | 1 cut(s) | 578 |
| PsiI | TTATAA | 1 cut(s) | 1173 |
| Psp124BI | GAGCTC | 1 cut(s) | 138 |
| Psp6I | CCWGG | 1 cut(s) | 946 |
| PspEI | GGTNACC | 1 cut(s) | 1160 |
| PspGI | CCWGG | 1 cut(s) | 946 |
| PspN4I | GGNNCC | 1 cut(s) | 945 |
| PspPI | GGNCC | 1 cut(s) | 817 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1445 |
| PsuI | RGATCY | 1 cut(s) | 1185 |
| PvuII | CAGCTG | 1 cut(s) | 82 |
| RruI | TCGCGA | 1 cut(s) | 56 |
| RsaI | GTAC | 3 cut(s) | 945, 964, 1061 |
| RsaNI | GTAC | 3 cut(s) | 944, 963, 1060 |
| RseI | CAYNNNNRTG | 2 cut(s) | 371, 462 |
| SacI | GAGCTC | 1 cut(s) | 138 |
| SacII | CCGCGG | 1 cut(s) | 211 |
| SalI | GTCGAC | 1 cut(s) | 203 |
| SapI | GCTCTTC | 2 cut(s) | 26, 103 |
| SaqAI | TTAA | 3 cut(s) | 638, 896, 1455 |
| SatI | GCNGC | 4 cut(s) | 80, 211, 417, 438 |
| Sau3AI | GATC | 3 cut(s) | 340, 1185, 1436 |
| Sau96I | GGNCC | 1 cut(s) | 817 |
| SchI | GAGTC | 2 cut(s) | 1052, 1136 |
| ScrFI | CCNGG | 4 cut(s) | 168, 336, 688, 948 |
| SduI | GDGCHC | 7 cut(s) | 21, 44, 138, 539, 578, 600, 758 |
| SfaNI | GCATC | 3 cut(s) | 492, 1144, 1230 |
| Sfr303I | CCGCGG | 1 cut(s) | 211 |
| SfuI | TTCGAA | 2 cut(s) | 1069, 1320 |
| SgrBI | CCGCGG | 1 cut(s) | 211 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 371, 462 |
| SmlI | CTYRAG | 2 cut(s) | 137, 1454 |
| SmoI | CTYRAG | 2 cut(s) | 137, 1454 |
| Sse9I | AATT | 6 cut(s) | 409, 584, 954, 967, 1168, 1348 |
| SseBI | AGGCCT | 1 cut(s) | 795 |
| SsiI | CCGC | 6 cut(s) | 208, 210, 856, 941, 1102, 1158 |
| SspI | AATATT | 1 cut(s) | 1336 |
| SspMI | CTAG | 5 cut(s) | 9, 296, 933, 1001, 1088 |
| SstI | GAGCTC | 1 cut(s) | 138 |
| StuI | AGGCCT | 1 cut(s) | 795 |
| StyD4I | CCNGG | 4 cut(s) | 166, 334, 686, 946 |
| StyI | CCWWGG | 1 cut(s) | 859 |
| TaaI | ACNGT | 5 cut(s) | 39, 187, 330, 643, 984 |
| TaiI | ACGT | 1 cut(s) | 915 |
| TaqI | TCGA | 6 cut(s) | 204, 276, 325, 1069, 1320, 1518 |
| TasI | AATT | 6 cut(s) | 409, 584, 954, 967, 1168, 1348 |
| TatI | WGTACW | 1 cut(s) | 962 |
| TauI | GCSGC | 1 cut(s) | 213 |
| TfiI | GAWTC | 3 cut(s) | 190, 359, 1071 |
| Tru1I | TTAA | 3 cut(s) | 638, 896, 1455 |
| Tru9I | TTAA | 3 cut(s) | 638, 896, 1455 |
| TscAI | CASTG | 3 cut(s) | 190, 427, 1413 |
| TseI | GCWGC | 3 cut(s) | 79, 416, 437 |
| TspDTI | ATGAA | 6 cut(s) | 446, 575, 632, 680, 800, 917 |
| TspGWI | ACGGA | 1 cut(s) | 227 |
| TspRI | CASTG | 3 cut(s) | 190, 427, 1413 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1375 |
| Vha464I | CTTAAG | 1 cut(s) | 1454 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1054 |
| XapI | RAATTY | 2 cut(s) | 409, 954 |
| XceI | RCATGY | 4 cut(s) | 582, 675, 976, 1102 |
| XmiI | GTMKAC | 2 cut(s) | 204, 764 |
| XspI | CTAG | 5 cut(s) | 9, 296, 933, 1001, 1088 |
| ZraI | GACGTC | 1 cut(s) | 913 |
| Zsp2I | ATGCAT | 2 cut(s) | 673, 978 |