Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G27460 |
| fragaria_vesca | FvH4_5g36010 FvH4_5g36010 FvH4_5g36010 FvH4_5g36010 |
| malus_domestica | MD00G1136100.v1.1 MD15G1379700.v1.1 |
| prunus_persica | Prupe.1G525900_v2.0.a1 |
| pyrus_communis | pycom15g34030 |
| rosa_chinensis | RchiOBHm_Chr1g0327731 RchiOBHm_Chr7g0237751 |
| rosa_laevigata | RLG00000000970 RLG00000029974 |
| rosa_multiflora | Rmu_ssc0000067.1_g000033 |
| rosa_roxburghii | Rroxscaffold_3G00223780 |
| rosa_rugosa | Rorug01G0070100 Rorug07G0307800 |
| rosa_samantha | Rh1AG086500 Rh1CG084100 Rh1DG091000 Rh1DG091100 Rh4AG105300 Rh4CG113800 Rh7AG463800 Rh7BG433900 Rh7CG480800 Rh7DG449700 |
| rosa_wichuraiana | Rw0G013090 Rw7G038370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 46 |
| AfaI | GTAC | 1 cut(s) | 37 |
| AgsI | TTSAA | 2 cut(s) | 61, 166 |
| AluBI | AGCT | 1 cut(s) | 89 |
| AluI | AGCT | 1 cut(s) | 89 |
| Alw26I | GTCTC | 1 cut(s) | 134 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BccI | CCATC | 2 cut(s) | 103, 124 |
| BcoDI | GTCTC | 1 cut(s) | 134 |
| BpuEI | CTTGAG | 1 cut(s) | 86 |
| BseGI | GGATG | 2 cut(s) | 96, 139 |
| BseMII | CTCAG | 2 cut(s) | 53, 92 |
| BsmAI | GTCTC | 1 cut(s) | 134 |
| Bsp143I | GATC | 1 cut(s) | 15 |
| BspCNI | CTCAG | 2 cut(s) | 52, 91 |
| BssMI | GATC | 1 cut(s) | 15 |
| BstDEI | CTNAG | 2 cut(s) | 39, 78 |
| BstF5I | GGATG | 2 cut(s) | 96, 139 |
| BstKTI | GATC | 1 cut(s) | 18 |
| BstMAI | GTCTC | 1 cut(s) | 134 |
| BstMBI | GATC | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 31 |
| BtsCI | GGATG | 2 cut(s) | 96, 139 |
| BtsI | GCAGTG | 1 cut(s) | 50 |
| BtsIMutI | CAGTG | 1 cut(s) | 50 |
| Csp6I | GTAC | 1 cut(s) | 36 |
| CviAII | CATG | 2 cut(s) | 22, 26 |
| CviJI | RGCY | 1 cut(s) | 89 |
| CviKI_1 | RGCY | 1 cut(s) | 89 |
| CviQI | GTAC | 1 cut(s) | 36 |
| DdeI | CTNAG | 2 cut(s) | 39, 78 |
| DpnI | GATC | 1 cut(s) | 17 |
| DpnII | GATC | 1 cut(s) | 15 |
| EcoT22I | ATGCAT | 1 cut(s) | 27 |
| FaeI | CATG | 2 cut(s) | 25, 29 |
| FaiI | YATR | 2 cut(s) | 23, 27 |
| FatI | CATG | 2 cut(s) | 21, 25 |
| FblI | GTMKAC | 1 cut(s) | 46 |
| FokI | GGATG | 2 cut(s) | 83, 146 |
| FspEI | CC | 7 cut(s) | 63, 67, 95, 101, 113, 116, 170 |
| Hin1II | CATG | 2 cut(s) | 25, 29 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 2 cut(s) | 47, 157 |
| Hpy188I | TCNGA | 2 cut(s) | 42, 81 |
| Hpy188III | TCNNGA | 1 cut(s) | 103 |
| Hpy8I | GTNNAC | 2 cut(s) | 47, 157 |
| HpyAV | CCTTC | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 3 cut(s) | 25, 55, 67 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 31 |
| HpyF3I | CTNAG | 2 cut(s) | 39, 78 |
| Hsp92II | CATG | 2 cut(s) | 25, 29 |
| Kzo9I | GATC | 1 cut(s) | 15 |
| MalI | GATC | 1 cut(s) | 17 |
| MboI | GATC | 1 cut(s) | 15 |
| MluCI | AATT | 2 cut(s) | 56, 123 |
| MnlI | CCTC | 2 cut(s) | 75, 110 |
| Mph1103I | ATGCAT | 1 cut(s) | 27 |
| MseI | TTAA | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 31 |
| NdeII | GATC | 1 cut(s) | 15 |
| NlaIII | CATG | 2 cut(s) | 25, 29 |
| NsiI | ATGCAT | 1 cut(s) | 27 |
| RsaI | GTAC | 1 cut(s) | 37 |
| RsaNI | GTAC | 1 cut(s) | 36 |
| SaqAI | TTAA | 1 cut(s) | 126 |
| Sau3AI | GATC | 1 cut(s) | 15 |
| SetI | ASST | 2 cut(s) | 86, 91 |
| SgeI | CNNG | 6 cut(s) | 34, 38, 43, 115, 164, 170 |
| SmlI | CTYRAG | 1 cut(s) | 101 |
| SmoI | CTYRAG | 1 cut(s) | 101 |
| Sse9I | AATT | 2 cut(s) | 56, 123 |
| TasI | AATT | 2 cut(s) | 56, 123 |
| Tru1I | TTAA | 1 cut(s) | 126 |
| Tru9I | TTAA | 1 cut(s) | 126 |
| TscAI | CASTG | 1 cut(s) | 57 |
| TspRI | CASTG | 1 cut(s) | 57 |
| XmiI | GTMKAC | 1 cut(s) | 46 |
| Zsp2I | ATGCAT | 1 cut(s) | 27 |