Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004574

Physical Location & Seq

Genomic Coordinates Reverse (-)

43220271 .. 43223125

Gene Structure 2855 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G528100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 756 bp

ATGGCGTCCGTGGTCCCCGACAACCTAACCAGAGAGCAATACGTGTACCTCGCGAAGCTAGCCGAGCAAGCCGAGCGCTACGAAGAGATGGTCCAATTCATGGAGAAGCTGGTCGTCGGCGCAACCCCCGCCGGCGAGCTGACAGTGGAGGAGCGGAACCTGCTCTCCGTGGCTTACAAGAACGTGATCGGCTCGCTCCGAGCCGCGTGGCGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGGGTCGCAAGAACGAGGAGCACGTGGTTCTGGTGAAGGAATATAGATCCAAGGTCGAGACCGAGCTCTCTGATGTCTGCGCCAGCATCTTGAAGATCTTGGACTCCAATCTCGTGCCCTCCGCCAAGTCCAGCGAGTCCAAGGTCTTCTACCTGAAGATGAAGGGCGACTACCACCGCTACATGGCTGAGTTCAAGGCTGCTGATGAGAGAAAGGCTGCTGCAGAAGACACCATGCTCGCTTACAAGGCTGCCCAGGACGTAGCGCTTGCGGATCTTGCACCAACGCATCCGATAAGATTGGGTCTAGCGCTGAATTTCTCAGTGTTCTACTATGAGATTCTCAATCAGTCTGATAAAGCTTGCAGCATGGCCAAACAGGCATTTGAGGAAGCTATTGCTGAGCTAGACACTTTGGGAGAAGAATCATACAAGGACAGCACTCTGATCATGCAACTTTTGAGGGACAACCTCACTCTTTGGACTTCAGATGCGGACCAGTTGGATGAACCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

252

Amino Acids

28.29

Weight (kDa)

4.79

Isoelectric Point (pI)

41.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004574)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65430 AT5G65430 AT5G65430
fragaria_vesca	FvH4_1g19920 FvH4_5g35740
malus_domestica	MD01G1037700.v1.1 MD08G1193600.v1.1 MD15G1315300.v1.1
prunus_persica	Prupe.1G528100_v2.0.a1 Prupe.6G196400_v2.0.a1
pyrus_communis	pycom01g06560 pycom08g16670 pycom15g27850
rosa_chinensis	RchiOBHm_Chr2g0111721 RchiOBHm_Chr7g0237361
rosa_laevigata	RLG00000001009 RLG00000017920
rosa_multiflora	Rmu_sc0000448.1_g000010
rosa_roxburghii	Rroxscaffold_2G00132140 Rroxscaffold_3G00224280
rosa_rugosa	Rorug02G0175800 Rorug07G0302900
rosa_samantha	Rh2AG228700 Rh2BG241000 Rh2CG232100 Rh2DG236700 Rh7BG430000 Rh7CG477500 Rh7DG446800
rosa_wichuraiana	Rw2G017670 Rw7G038110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	168
AccB7I	CCANNNNNTGG	1 cut(s)	100
AccBSI	CCGCTC	1 cut(s)	154
AccII	CGCG	2 cut(s)	53, 206
AciI	CCGC	7 cut(s)	129, 154, 204, 363, 418, 512, 734
AclWI	GGATC	2 cut(s)	282, 522
AcoI	YGGCCR	1 cut(s)	612
AcsI	RAATTY	1 cut(s)	556
AcuI	CTGAAG	2 cut(s)	416, 711
AcvI	CACGTG	1 cut(s)	265
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	1 cut(s)	47
AfeI	AGCGCT	3 cut(s)	77, 507, 552
AfiI	CCNNNNNNNGG	2 cut(s)	100, 424
AflIII	ACRYGT	1 cut(s)	42
AgsI	TTSAA	2 cut(s)	334, 436
AjnI	CCWGG	1 cut(s)	495
AloI	GAACNNNNNNTCC	2 cut(s)	149, 181
AluBI	AGCT	7 cut(s)	58, 109, 139, 307, 602, 635, 646
AluI	AGCT	7 cut(s)	58, 109, 139, 307, 602, 635, 646
Alw21I	GWGCWC	2 cut(s)	264, 309
Alw26I	GTCTC	1 cut(s)	293
AlwI	GGATC	2 cut(s)	282, 522
Aor51HI	AGCGCT	3 cut(s)	77, 507, 552
AoxI	GGCC	1 cut(s)	612
ApeKI	GCWGC	5 cut(s)	440, 458, 461, 491, 606
ApoI	RAATTY	1 cut(s)	556
ArsI	GACNNNNNNTTYG	2 cut(s)	75, 107
AspLEI	GCGC	6 cut(s)	78, 122, 213, 323, 508, 553
AspS9I	GGNCC	3 cut(s)	13, 91, 736
AsuHPI	GGTGA	1 cut(s)	286
AsuNHI	GCTAGC	1 cut(s)	58
AvaII	GGWCC	3 cut(s)	13, 91, 736
BaeGI	GKGCMC	1 cut(s)	360
BalI	TGGCCA	1 cut(s)	614
BanII	GRGCYC	1 cut(s)	309
BarI	GAAGNNNNNNTAC	2 cut(s)	395, 427
BauI	CACGAG	1 cut(s)	353
BbrPI	CACGTG	1 cut(s)	265
BbsI	GAAGAC	2 cut(s)	379, 474
Bbv12I	GWGCWC	2 cut(s)	264, 309
BbvI	GCAGC	5 cut(s)	427, 445, 448, 478, 618
BccI	CCATC	1 cut(s)	82
BciT130I	CCWGG	1 cut(s)	497
BclI	TGATCA	1 cut(s)	687
BcoDI	GTCTC	1 cut(s)	293
BfaI	CTAG	3 cut(s)	59, 548, 647
BfmI	CTRYAG	1 cut(s)	462
BfoI	RGCGCY	3 cut(s)	79, 509, 554
BfuAI	ACCTGC	1 cut(s)	168
BglI	GCCNNNNNGGC	1 cut(s)	620
BglII	AGATCT	1 cut(s)	336
BisI	GCNGC	6 cut(s)	204, 441, 459, 462, 492, 607
BlpI	GCTNAGC	1 cut(s)	642
BlsI	GCNGC	6 cut(s)	205, 442, 460, 463, 493, 608
Bme1390I	CCNGG	1 cut(s)	497
Bme18I	GGWCC	3 cut(s)	13, 91, 736
BmgT120I	GGNCC	3 cut(s)	13, 91, 736
BmiI	GGNNCC	2 cut(s)	15, 158
BmrFI	CCNGG	1 cut(s)	497
BmsI	GCATC	4 cut(s)	222, 336, 538, 721
BmtI	GCTAGC	1 cut(s)	62
BpiI	GAAGAC	2 cut(s)	379, 474
Bpu1102I	GCTNAGC	1 cut(s)	642
BsaAI	YACGTR	2 cut(s)	43, 265
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	293
BsaJI	CCNNGG	5 cut(s)	9, 168, 291, 381, 495
BsaXI	ACNNNNNCTCC	2 cut(s)	149, 179
Bsc4I	CCNNNNNNNGG	2 cut(s)	100, 424
Bse118I	RCCGGY	1 cut(s)	131
Bse1I	ACTGG	1 cut(s)	739
BseBI	CCWGG	1 cut(s)	497
BseDI	CCNNGG	5 cut(s)	9, 168, 291, 381, 495
BseGI	GGATG	2 cut(s)	529, 751
BseLI	CCNNNNNNNGG	2 cut(s)	100, 424
BseMII	CTCAG	3 cut(s)	420, 576, 633
BseNI	ACTGG	1 cut(s)	739
BseRI	GAGGAG	3 cut(s)	164, 254, 272
BseSI	GKGCMC	1 cut(s)	360
BseXI	GCAGC	5 cut(s)	427, 445, 448, 478, 618
Bsh1236I	CGCG	2 cut(s)	53, 206
Bsh1285I	CGRYCG	1 cut(s)	228
BshFI	GGCC	1 cut(s)	614
BsiEI	CGRYCG	1 cut(s)	228
BsiHKAI	GWGCWC	2 cut(s)	264, 309
BsiSI	CCGG	1 cut(s)	132
BslFI	GGGAC	1 cut(s)	719
BslI	CCNNNNNNNGG	2 cut(s)	100, 424
BsmAI	GTCTC	1 cut(s)	293
BsmFI	GGGAC	1 cut(s)	719
BsnI	GGCC	1 cut(s)	614
Bso31I	GGTCTC	1 cut(s)	293
Bsp1286I	GDGCHC	3 cut(s)	264, 309, 360
Bsp143I	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
Bsp1720I	GCTNAGC	1 cut(s)	642
Bsp68I	TCGCGA	1 cut(s)	53
BspACI	CCGC	7 cut(s)	129, 154, 204, 363, 418, 512, 734
BspANI	GGCC	1 cut(s)	614
BspCNI	CTCAG	3 cut(s)	421, 575, 634
BspFNI	CGCG	2 cut(s)	53, 206
BspLI	GGNNCC	2 cut(s)	15, 158
BspMAI	CTGCAG	1 cut(s)	466
BspMI	ACCTGC	1 cut(s)	168
BspOI	GCTAGC	1 cut(s)	62
BspPI	GGATC	2 cut(s)	282, 522
BspTNI	GGTCTC	1 cut(s)	293
BsrBI	CCGCTC	1 cut(s)	154
BsrFI	RCCGGY	1 cut(s)	131
BsrI	ACTGG	1 cut(s)	739
BssAI	RCCGGY	1 cut(s)	131
BssECI	CCNNGG	5 cut(s)	9, 168, 291, 381, 495
BssMI	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	353
BssT1I	CCWWGG	2 cut(s)	291, 381
Bst2BI	CACGAG	1 cut(s)	353
Bst2UI	CCWGG	1 cut(s)	497
Bst4CI	ACNGT	1 cut(s)	145
Bst6I	CTCTTC	1 cut(s)	78
BstACI	GRCGYC	1 cut(s)	5
BstBAI	YACGTR	2 cut(s)	43, 265
BstC8I	GCNNGC	9 cut(s)	60, 69, 133, 137, 194, 325, 480, 510, 604
BstDEI	CTNAG	3 cut(s)	429, 562, 642
BstDSI	CCRYGG	2 cut(s)	9, 168
BstF5I	GGATG	2 cut(s)	529, 751
BstFNI	CGCG	2 cut(s)	53, 206
BstH2I	RGCGCY	3 cut(s)	79, 509, 554
BstHHI	GCGC	6 cut(s)	78, 122, 213, 323, 508, 553
BstKTI	GATC	6 cut(s)	189, 228, 290, 339, 517, 690
BstMAI	GTCTC	1 cut(s)	293
BstMBI	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
BstMCI	CGRYCG	1 cut(s)	228
BstMWI	GCNNNNNNNGC	9 cut(s)	59, 64, 68, 73, 128, 160, 488, 518, 620
BstNI	CCWGG	1 cut(s)	497
BstSCI	CCNGG	1 cut(s)	495
BstSFI	CTRYAG	1 cut(s)	462
BstSLI	GKGCMC	1 cut(s)	360
BstUI	CGCG	2 cut(s)	53, 206
BstV1I	GCAGC	5 cut(s)	427, 445, 448, 478, 618
BstV2I	GAAGAC	2 cut(s)	379, 474
BstX2I	RGATCY	3 cut(s)	287, 336, 514
BstYI	RGATCY	3 cut(s)	287, 336, 514
BsuRI	GGCC	1 cut(s)	614
BtgI	CCRYGG	2 cut(s)	9, 168
BtsCI	GGATG	2 cut(s)	529, 751
BtsIMutI	CAGTG	2 cut(s)	150, 570
BtuMI	TCGCGA	1 cut(s)	53
BveI	ACCTGC	1 cut(s)	168
Cac8I	GCNNGC	9 cut(s)	60, 69, 133, 137, 194, 325, 480, 510, 604
CfoI	GCGC	6 cut(s)	78, 122, 213, 323, 508, 553
Cfr10I	RCCGGY	1 cut(s)	131
Cfr13I	GGNCC	3 cut(s)	13, 91, 736
Csp6I	GTAC	1 cut(s)	46
CviAII	CATG	5 cut(s)	100, 424, 475, 610, 691
CviQI	GTAC	1 cut(s)	46
DdeI	CTNAG	3 cut(s)	429, 562, 642
DpnI	GATC	6 cut(s)	188, 227, 289, 338, 516, 689
DpnII	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
EaeI	YGGCCR	1 cut(s)	612
Eam1104I	CTCTTC	1 cut(s)	78
EarI	CTCTTC	1 cut(s)	78
EciI	GGCGGA	1 cut(s)	352
Ecl136II	GAGCTC	1 cut(s)	307
Eco130I	CCWWGG	2 cut(s)	291, 381
Eco24I	GRGCYC	1 cut(s)	309
Eco31I	GGTCTC	1 cut(s)	293
Eco47I	GGWCC	3 cut(s)	13, 91, 736
Eco47III	AGCGCT	3 cut(s)	77, 507, 552
Eco53kI	GAGCTC	1 cut(s)	307
Eco57I	CTGAAG	2 cut(s)	416, 711
Eco72I	CACGTG	1 cut(s)	265
EcoICRI	GAGCTC	1 cut(s)	307
EcoRII	CCWGG	1 cut(s)	495
EcoT14I	CCWWGG	2 cut(s)	291, 381
EcoT38I	GRGCYC	1 cut(s)	309
ErhI	CCWWGG	2 cut(s)	291, 381
FaeI	CATG	5 cut(s)	103, 427, 478, 613, 694
FaiI	YATR	9 cut(s)	101, 285, 425, 476, 576, 611, 670, 692, 754
FaqI	GGGAC	1 cut(s)	719
FatI	CATG	5 cut(s)	99, 423, 474, 609, 690
FauI	CCCGC	1 cut(s)	136
FbaI	TGATCA	1 cut(s)	687
Fnu4HI	GCNGC	6 cut(s)	204, 441, 459, 462, 492, 607
FokI	GGATG	1 cut(s)	516
FriOI	GRGCYC	1 cut(s)	309
Fsp4HI	GCNGC	6 cut(s)	204, 441, 459, 462, 492, 607
FspBI	CTAG	3 cut(s)	59, 548, 647
GlaI	GCGC	6 cut(s)	77, 121, 212, 322, 507, 552
GluI	GCNGC	6 cut(s)	204, 441, 459, 462, 492, 607
HaeII	RGCGCY	3 cut(s)	79, 509, 554
HaeIII	GGCC	1 cut(s)	614
HapII	CCGG	1 cut(s)	132
HhaI	GCGC	6 cut(s)	78, 122, 213, 323, 508, 553
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	5 cut(s)	103, 427, 478, 613, 694
Hin6I	GCGC	6 cut(s)	76, 120, 211, 321, 506, 551
HinP1I	GCGC	6 cut(s)	76, 120, 211, 321, 506, 551
HindIII	AAGCTT	1 cut(s)	600
HinfI	GANTC	4 cut(s)	344, 377, 580, 665
HpaII	CCGG	1 cut(s)	132
HphI	GGTGA	1 cut(s)	286
Hpy166II	GTNNAC	1 cut(s)	46
Hpy188I	TCNGA	6 cut(s)	200, 313, 534, 595, 687, 730
Hpy188III	TCNNGA	3 cut(s)	52, 298, 331
Hpy8I	GTNNAC	1 cut(s)	46
Hpy99I	CGWCG	2 cut(s)	119, 226
HpyAV	CCTTC	3 cut(s)	229, 271, 397
HpyCH4III	ACNGT	1 cut(s)	145
HpyCH4IV	ACGT	4 cut(s)	42, 183, 264, 501
HpyCH4V	TGCA	4 cut(s)	464, 521, 606, 694
HpyF10VI	GCNNNNNNNGC	9 cut(s)	59, 64, 68, 73, 128, 160, 488, 518, 620
HpyF3I	CTNAG	3 cut(s)	429, 562, 642
HpySE526I	ACGT	4 cut(s)	42, 183, 264, 501
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	5 cut(s)	103, 427, 478, 613, 694
HspAI	GCGC	6 cut(s)	76, 120, 211, 321, 506, 551
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
Ksp22I	TGATCA	1 cut(s)	687
Kzo9I	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
LmnI	GCTCC	3 cut(s)	151, 201, 259
Lsp1109I	GCAGC	5 cut(s)	427, 445, 448, 478, 618
LweI	GCATC	4 cut(s)	222, 336, 538, 721
MaeI	CTAG	3 cut(s)	59, 548, 647
MaeII	ACGT	4 cut(s)	42, 183, 264, 501
MalI	GATC	6 cut(s)	188, 227, 289, 338, 516, 689
MbiI	CCGCTC	1 cut(s)	154
MboI	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
MboII	GAAGA	6 cut(s)	95, 346, 379, 409, 479, 674
MflI	RGATCY	3 cut(s)	287, 336, 514
MhlI	GDGCHC	3 cut(s)	264, 309, 360
MlsI	TGGCCA	1 cut(s)	614
MluCI	AATT	2 cut(s)	95, 556
MluNI	TGGCCA	1 cut(s)	614
MlyI	GAGTC	2 cut(s)	338, 386
MmeI	TCCRAC	1 cut(s)	723
MnlI	CCTC	9 cut(s)	59, 142, 232, 235, 250, 370, 622, 696, 722
Mox20I	TGGCCA	1 cut(s)	614
MreI	CGCCGGCG	1 cut(s)	131
MroNI	GCCGGC	1 cut(s)	131
MscI	TGGCCA	1 cut(s)	614
Msp20I	TGGCCA	1 cut(s)	614
MspI	CCGG	1 cut(s)	132
MspR9I	CCNGG	1 cut(s)	497
MvaI	CCWGG	1 cut(s)	497
MvnI	CGCG	2 cut(s)	53, 206
MwoI	GCNNNNNNNGC	9 cut(s)	59, 64, 68, 73, 128, 160, 488, 518, 620
NaeI	GCCGGC	1 cut(s)	133
NdeII	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
NgoMIV	GCCGGC	1 cut(s)	131
NheI	GCTAGC	1 cut(s)	58
NlaIII	CATG	5 cut(s)	103, 427, 478, 613, 694
NlaIV	GGNNCC	2 cut(s)	15, 158
NmeAIII	GCCGAG	2 cut(s)	88, 97
NruI	TCGCGA	1 cut(s)	53
PcsI	WCGNNNNNNNCGW	1 cut(s)	261
PdiI	GCCGGC	1 cut(s)	133
PfeI	GAWTC	2 cut(s)	580, 665
PflMI	CCANNNNNTGG	1 cut(s)	100
PkrI	GCNGC	6 cut(s)	205, 442, 460, 463, 493, 608
Ple19I	CGATCG	1 cut(s)	228
PleI	GAGTC	2 cut(s)	338, 385
PmaCI	CACGTG	1 cut(s)	265
PmlI	CACGTG	1 cut(s)	265
PpsI	GAGTC	2 cut(s)	338, 385
Ppu21I	YACGTR	2 cut(s)	43, 265
Psp124BI	GAGCTC	1 cut(s)	309
Psp6I	CCWGG	1 cut(s)	495
PspCI	CACGTG	1 cut(s)	265
PspGI	CCWGG	1 cut(s)	495
PspN4I	GGNNCC	2 cut(s)	15, 158
PspPI	GGNCC	3 cut(s)	13, 91, 736
PstI	CTGCAG	1 cut(s)	466
PsuI	RGATCY	3 cut(s)	287, 336, 514
PvuI	CGATCG	1 cut(s)	228
RruI	TCGCGA	1 cut(s)	53
RsaI	GTAC	1 cut(s)	47
RsaNI	GTAC	1 cut(s)	46
SacI	GAGCTC	1 cut(s)	309
SatI	GCNGC	6 cut(s)	204, 441, 459, 462, 492, 607
Sau3AI	GATC	6 cut(s)	186, 225, 287, 336, 514, 687
Sau96I	GGNCC	3 cut(s)	13, 91, 736
SchI	GAGTC	2 cut(s)	338, 386
ScrFI	CCNGG	1 cut(s)	497
SduI	GDGCHC	3 cut(s)	264, 309, 360
SfaNI	GCATC	4 cut(s)	222, 336, 538, 721
SfcI	CTRYAG	1 cut(s)	462
SgrAI	CRCCGGYG	1 cut(s)	131
SinI	GGWCC	3 cut(s)	13, 91, 736
Sse9I	AATT	2 cut(s)	95, 556
SsiI	CCGC	7 cut(s)	129, 154, 204, 363, 418, 512, 734
SspMI	CTAG	3 cut(s)	59, 548, 647
SstI	GAGCTC	1 cut(s)	309
StyD4I	CCNGG	1 cut(s)	495
StyI	CCWWGG	2 cut(s)	291, 381
TaaI	ACNGT	1 cut(s)	145
TaiI	ACGT	4 cut(s)	45, 186, 267, 504
TaqI	TCGA	3 cut(s)	224, 228, 297
TaqII	GACCGA	1 cut(s)	317
TasI	AATT	2 cut(s)	95, 556
TauI	GCSGC	1 cut(s)	206
TfiI	GAWTC	2 cut(s)	580, 665
TscAI	CASTG	2 cut(s)	150, 570
TseI	GCWGC	5 cut(s)	440, 458, 461, 491, 606
TspDTI	ATGAA	2 cut(s)	88, 416
TspGWI	ACGGA	1 cut(s)	157
TspRI	CASTG	2 cut(s)	150, 570
Van91I	CCANNNNNTGG	1 cut(s)	100
VpaK11BI	GGWCC	3 cut(s)	13, 91, 736
XapI	RAATTY	1 cut(s)	556
XspI	CTAG	3 cut(s)	59, 548, 647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.