Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0004574

Physical Location & Seq

Genomic Coordinates Reverse (-)

20408652 .. 20414150

Gene Structure 5499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G196400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 762 bp

ATGGCTTCCGCAGTGCCCGAAACCCTAAGCCGAGAACAGTATGTGTACCTGGCCAAGCTCGCCGAGCAAGCCGAGCGCTACGAGGAGATGGTGAGCTTCATGGAGAAGCTGGTGGTGGGGTCCACCGCCGCCGGGACTGAACTGACGGTCGAGGAGCGCAACCTGCTCAGTGTCGCCTACAAGAACGTCATCGGCTCGCTCCGGGCGGCTTGGCGCATAGTGTCATCGATCGAGCAGAAGGAGGAGGGACGCCGGAACGAGGAACACGTGGCGCTCGTCAAGCAGTACAGATCCAAGGTCGAGACTGAGCTCTCGGCCATCTGCGCCGGAATTCTCGAGCTCCTGGAGAAGCACCTTGTTCCATCGGCTTCTACTGGAGAGTCCAAGGTCTTCTACTTGAAGATGAAGGGCGATTATCATCGATACCTCGCTGAGTTTAAAAATGGCGATGAGAGAAAAACCGCTGCTGAGGACACCATGGTTGCTTACAAGGCTGCTCAGGATATTGCGCTGGCTGATTTGGCGCCTACGCATCCGATAAGGTTGGGGCTGGCGCTCAATTTCTCGGTGTTTTACTACGAGATCCTTAATTCCTCAGAGAAAGCTTGTAGCATGGCTAAACAGGCTTTTGAGGAAGCTATTGCTGAGCTTGATACGCTGGGAGAGGAATCATACAAAGACAGCACCCTTATCATGCAACTGCTGAGGGACAACCTCACTCTTTGGACTTCAGATTTGCAGGAGCAGATGGATGAGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

254

Amino Acids

28.45

Weight (kDa)

4.86

Isoelectric Point (pI)

44.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004574)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65430 AT5G65430 AT5G65430
fragaria_vesca	FvH4_1g19920 FvH4_5g35740
malus_domestica	MD01G1037700.v1.1 MD08G1193600.v1.1 MD15G1315300.v1.1
prunus_persica	Prupe.1G528100_v2.0.a1 Prupe.6G196400_v2.0.a1
pyrus_communis	pycom01g06560 pycom08g16670 pycom15g27850
rosa_chinensis	RchiOBHm_Chr2g0111721 RchiOBHm_Chr7g0237361
rosa_laevigata	RLG00000001009 RLG00000017920
rosa_multiflora	Rmu_sc0000448.1_g000010
rosa_roxburghii	Rroxscaffold_2G00132140 Rroxscaffold_3G00224280
rosa_rugosa	Rorug02G0175800 Rorug07G0302900
rosa_samantha	Rh2AG228700 Rh2BG241000 Rh2CG232100 Rh2DG236700 Rh7BG430000 Rh7CG477500 Rh7DG446800
rosa_wichuraiana	Rw2G017670 Rw7G038110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	171
AccB1I	GGYRCC	1 cut(s)	523
AciI	CCGC	5 cut(s)	9, 126, 129, 206, 462
AclWI	GGATC	2 cut(s)	285, 577
AcoI	YGGCCR	2 cut(s)	51, 315
AcsI	RAATTY	1 cut(s)	330
AcuI	CTGAAG	1 cut(s)	714
AcvI	CACGTG	1 cut(s)	268
AcyI	GRCGYC	2 cut(s)	250, 524
AfaI	GTAC	2 cut(s)	47, 287
AfeI	AGCGCT	1 cut(s)	77
AfiI	CCNNNNNNNGG	2 cut(s)	132, 259
AflIII	ACRYGT	1 cut(s)	265
AgsI	TTSAA	1 cut(s)	400
AjnI	CCWGG	2 cut(s)	48, 342
AluBI	AGCT	8 cut(s)	58, 96, 109, 310, 340, 605, 638, 649
AluI	AGCT	8 cut(s)	58, 96, 109, 310, 340, 605, 638, 649
Alw21I	GWGCWC	2 cut(s)	312, 342
Alw26I	GTCTC	1 cut(s)	296
AlwI	GGATC	2 cut(s)	285, 577
Ama87I	CYCGRG	1 cut(s)	335
Aor51HI	AGCGCT	1 cut(s)	77
AoxI	GGCC	2 cut(s)	51, 315
ApeKI	GCWGC	2 cut(s)	464, 494
ApoI	RAATTY	1 cut(s)	330
ArsI	GACNNNNNNTTYG	2 cut(s)	718, 750
AspLEI	GCGC	8 cut(s)	78, 159, 216, 274, 326, 511, 526, 556
AspS9I	GGNCC	1 cut(s)	120
AsuC2I	CCSGG	2 cut(s)	133, 203
AsuHPI	GGTGA	1 cut(s)	103
AvaI	CYCGRG	1 cut(s)	335
AvaII	GGWCC	1 cut(s)	120
BaeGI	GKGCMC	1 cut(s)	18
BalI	TGGCCA	1 cut(s)	53
BanI	GGYRCC	1 cut(s)	523
BanII	GRGCYC	2 cut(s)	312, 342
BbrPI	CACGTG	1 cut(s)	268
BbsI	GAAGAC	1 cut(s)	382
Bbv12I	GWGCWC	2 cut(s)	312, 342
BbvCI	CCTCAGC	2 cut(s)	468, 704
BbvI	GCAGC	2 cut(s)	451, 481
BccI	CCATC	4 cut(s)	82, 326, 370, 742
BciT130I	CCWGG	2 cut(s)	50, 344
BcnI	CCSGG	2 cut(s)	133, 203
BcoDI	GTCTC	1 cut(s)	296
BfoI	RGCGCY	4 cut(s)	79, 275, 527, 557
BfuAI	ACCTGC	1 cut(s)	171
BisI	GCNGC	4 cut(s)	129, 207, 465, 495
BlpI	GCTNAGC	1 cut(s)	645
BlsI	GCNGC	4 cut(s)	130, 208, 466, 496
Bme1390I	CCNGG	4 cut(s)	50, 133, 203, 344
Bme18I	GGWCC	1 cut(s)	120
BmeT110I	CYCGRG	1 cut(s)	335
BmgT120I	GGNCC	1 cut(s)	120
BmiI	GGNNCC	2 cut(s)	121, 525
BmrFI	CCNGG	4 cut(s)	50, 133, 203, 344
BmsI	GCATC	1 cut(s)	541
BpiI	GAAGAC	1 cut(s)	382
BpmI	CTGGAG	2 cut(s)	365, 396
Bpu10I	CCTNAGC	4 cut(s)	26, 468, 498, 704
Bpu1102I	GCTNAGC	1 cut(s)	645
BpuMI	CCSGG	2 cut(s)	133, 203
Bsa29I	ATCGAT	2 cut(s)	227, 421
BsaAI	YACGTR	1 cut(s)	268
BsaBI	GATNNNNATC	1 cut(s)	417
BsaHI	GRCGYC	2 cut(s)	250, 524
BsaJI	CCNNGG	3 cut(s)	294, 384, 477
Bsc4I	CCNNNNNNNGG	2 cut(s)	132, 259
Bse1I	ACTGG	1 cut(s)	379
Bse8I	GATNNNNATC	1 cut(s)	417
BseBI	CCWGG	2 cut(s)	50, 344
BseCI	ATCGAT	2 cut(s)	227, 421
BseDI	CCNNGG	3 cut(s)	294, 384, 477
BseGI	GGATG	2 cut(s)	532, 757
BseJI	GATNNNNATC	1 cut(s)	417
BseLI	CCNNNNNNNGG	2 cut(s)	132, 259
BseMII	CTCAG	8 cut(s)	181, 297, 423, 459, 512, 609, 636, 695
BseNI	ACTGG	1 cut(s)	379
BseRI	GAGGAG	3 cut(s)	98, 167, 257
BseSI	GKGCMC	1 cut(s)	18
BseXI	GCAGC	2 cut(s)	451, 481
BseYI	CCCAGC	1 cut(s)	658
Bsh1285I	CGRYCG	2 cut(s)	150, 231
BshFI	GGCC	2 cut(s)	53, 317
BshNI	GGYRCC	1 cut(s)	523
BshVI	ATCGAT	2 cut(s)	227, 421
BsiEI	CGRYCG	2 cut(s)	150, 231
BsiHKAI	GWGCWC	2 cut(s)	312, 342
BsiHKCI	CYCGRG	1 cut(s)	335
BsiSI	CCGG	4 cut(s)	132, 202, 253, 327
BslFI	GGGAC	3 cut(s)	148, 261, 722
BslI	CCNNNNNNNGG	2 cut(s)	132, 259
BsmAI	GTCTC	1 cut(s)	296
BsmFI	GGGAC	3 cut(s)	148, 261, 722
BsnI	GGCC	2 cut(s)	53, 317
BsoBI	CYCGRG	1 cut(s)	335
Bsp1286I	GDGCHC	3 cut(s)	18, 312, 342
Bsp143I	GATC	3 cut(s)	228, 290, 582
Bsp1720I	GCTNAGC	1 cut(s)	645
Bsp19I	CCATGG	1 cut(s)	477
BspACI	CCGC	5 cut(s)	9, 126, 129, 206, 462
BspANI	GGCC	2 cut(s)	53, 317
BspCNI	CTCAG	8 cut(s)	180, 298, 424, 460, 511, 608, 637, 696
BspDI	ATCGAT	2 cut(s)	227, 421
BspLI	GGNNCC	2 cut(s)	121, 525
BspMI	ACCTGC	1 cut(s)	171
BspPI	GGATC	2 cut(s)	285, 577
BspT107I	GGYRCC	1 cut(s)	523
BsrI	ACTGG	1 cut(s)	379
BssECI	CCNNGG	3 cut(s)	294, 384, 477
BssMI	GATC	3 cut(s)	228, 290, 582
BssNI	GRCGYC	2 cut(s)	250, 524
BssT1I	CCWWGG	3 cut(s)	294, 384, 477
Bst2UI	CCWGG	2 cut(s)	50, 344
Bst4CI	ACNGT	2 cut(s)	39, 148
BstACI	GRCGYC	2 cut(s)	250, 524
BstBAI	YACGTR	1 cut(s)	268
BstC8I	GCNNGC	5 cut(s)	60, 69, 197, 513, 552
BstDEI	CTNAG	9 cut(s)	26, 167, 306, 432, 468, 498, 595, 645, 704
BstDSI	CCRYGG	1 cut(s)	477
BstF5I	GGATG	2 cut(s)	532, 757
BstH2I	RGCGCY	4 cut(s)	79, 275, 527, 557
BstHHI	GCGC	8 cut(s)	78, 159, 216, 274, 326, 511, 526, 556
BstKTI	GATC	3 cut(s)	231, 293, 585
BstMAI	GTCTC	1 cut(s)	296
BstMBI	GATC	3 cut(s)	228, 290, 582
BstMCI	CGRYCG	2 cut(s)	150, 231
BstNI	CCWGG	2 cut(s)	50, 344
BstSCI	CCNGG	4 cut(s)	48, 131, 201, 342
BstSLI	GKGCMC	1 cut(s)	18
BstV1I	GCAGC	2 cut(s)	451, 481
BstV2I	GAAGAC	1 cut(s)	382
BstX2I	RGATCY	2 cut(s)	290, 582
BstYI	RGATCY	2 cut(s)	290, 582
Bsu15I	ATCGAT	2 cut(s)	227, 421
BsuRI	GGCC	2 cut(s)	53, 317
BsuTUI	ATCGAT	2 cut(s)	227, 421
BtgI	CCRYGG	1 cut(s)	477
BtgZI	GCGATG	1 cut(s)	462
BtsCI	GGATG	2 cut(s)	532, 757
BtsI	GCAGTG	1 cut(s)	18
BtsIMutI	CAGTG	2 cut(s)	18, 175
BveI	ACCTGC	1 cut(s)	171
Cac8I	GCNNGC	5 cut(s)	60, 69, 197, 513, 552
CfoI	GCGC	8 cut(s)	78, 159, 216, 274, 326, 511, 526, 556
Cfr13I	GGNCC	1 cut(s)	120
ClaI	ATCGAT	2 cut(s)	227, 421
CseI	GACGC	1 cut(s)	258
Csp6I	GTAC	2 cut(s)	46, 286
CviAII	CATG	4 cut(s)	100, 478, 613, 694
CviQI	GTAC	2 cut(s)	46, 286
DdeI	CTNAG	9 cut(s)	26, 167, 306, 432, 468, 498, 595, 645, 704
DinI	GGCGCC	1 cut(s)	525
DpnI	GATC	3 cut(s)	230, 292, 584
DpnII	GATC	3 cut(s)	228, 290, 582
DraI	TTTAAA	1 cut(s)	439
EaeI	YGGCCR	2 cut(s)	51, 315
Ecl136II	GAGCTC	2 cut(s)	310, 340
Eco130I	CCWWGG	3 cut(s)	294, 384, 477
Eco24I	GRGCYC	2 cut(s)	312, 342
Eco47I	GGWCC	1 cut(s)	120
Eco47III	AGCGCT	1 cut(s)	77
Eco53kI	GAGCTC	2 cut(s)	310, 340
Eco57I	CTGAAG	1 cut(s)	714
Eco72I	CACGTG	1 cut(s)	268
Eco88I	CYCGRG	1 cut(s)	335
EcoICRI	GAGCTC	2 cut(s)	310, 340
EcoRI	GAATTC	1 cut(s)	330
EcoRII	CCWGG	2 cut(s)	48, 342
EcoT14I	CCWWGG	3 cut(s)	294, 384, 477
EcoT38I	GRGCYC	2 cut(s)	312, 342
EgeI	GGCGCC	1 cut(s)	525
EheI	GGCGCC	1 cut(s)	525
ErhI	CCWWGG	3 cut(s)	294, 384, 477
FaeI	CATG	4 cut(s)	103, 481, 616, 697
FaiI	YATR	7 cut(s)	42, 101, 218, 479, 614, 673, 695
FaqI	GGGAC	3 cut(s)	148, 261, 722
FatI	CATG	4 cut(s)	99, 477, 612, 693
Fnu4HI	GCNGC	4 cut(s)	129, 207, 465, 495
FokI	GGATG	1 cut(s)	519
FriOI	GRGCYC	2 cut(s)	312, 342
Fsp4HI	GCNGC	4 cut(s)	129, 207, 465, 495
GlaI	GCGC	8 cut(s)	77, 158, 215, 273, 325, 510, 525, 555
GluI	GCNGC	4 cut(s)	129, 207, 465, 495
GsaI	CCCAGC	1 cut(s)	662
GsuI	CTGGAG	2 cut(s)	365, 396
HaeII	RGCGCY	4 cut(s)	79, 275, 527, 557
HaeIII	GGCC	2 cut(s)	53, 317
HapII	CCGG	4 cut(s)	132, 202, 253, 327
HgaI	GACGC	1 cut(s)	258
HhaI	GCGC	8 cut(s)	78, 159, 216, 274, 326, 511, 526, 556
Hin1I	GRCGYC	2 cut(s)	250, 524
Hin1II	CATG	4 cut(s)	103, 481, 616, 697
Hin6I	GCGC	8 cut(s)	76, 157, 214, 272, 324, 509, 524, 554
HinP1I	GCGC	8 cut(s)	76, 157, 214, 272, 324, 509, 524, 554
HindIII	AAGCTT	1 cut(s)	603
HinfI	GANTC	2 cut(s)	380, 668
HpaII	CCGG	4 cut(s)	132, 202, 253, 327
HphI	GGTGA	1 cut(s)	103
Hpy166II	GTNNAC	2 cut(s)	46, 123
Hpy188I	TCNGA	3 cut(s)	537, 598, 733
Hpy188III	TCNNGA	3 cut(s)	301, 335, 500
Hpy8I	GTNNAC	2 cut(s)	46, 123
HpyAV	CCTTC	2 cut(s)	232, 400
HpyCH4III	ACNGT	2 cut(s)	39, 148
HpyCH4IV	ACGT	2 cut(s)	186, 267
HpyCH4V	TGCA	2 cut(s)	697, 739
HpyF3I	CTNAG	9 cut(s)	26, 167, 306, 432, 468, 498, 595, 645, 704
HpySE526I	ACGT	2 cut(s)	186, 267
Hsp92I	GRCGYC	2 cut(s)	250, 524
Hsp92II	CATG	4 cut(s)	103, 481, 616, 697
HspAI	GCGC	8 cut(s)	76, 157, 214, 272, 324, 509, 524, 554
KasI	GGCGCC	1 cut(s)	523
Kzo9I	GATC	3 cut(s)	228, 290, 582
LmnI	GCTCC	4 cut(s)	154, 204, 345, 742
Lsp1109I	GCAGC	2 cut(s)	451, 481
LweI	GCATC	1 cut(s)	541
MaeII	ACGT	2 cut(s)	186, 267
MalI	GATC	3 cut(s)	230, 292, 584
MboI	GATC	3 cut(s)	228, 290, 582
MboII	GAAGA	2 cut(s)	382, 412
MflI	RGATCY	2 cut(s)	290, 582
MhlI	GDGCHC	3 cut(s)	18, 312, 342
MlsI	TGGCCA	1 cut(s)	53
MluCI	AATT	3 cut(s)	330, 559, 589
MluNI	TGGCCA	1 cut(s)	53
Mly113I	GGCGCC	1 cut(s)	524
MlyI	GAGTC	1 cut(s)	389
Mox20I	TGGCCA	1 cut(s)	53
MscI	TGGCCA	1 cut(s)	53
MseI	TTAA	3 cut(s)	438, 588, 760
Msp20I	TGGCCA	1 cut(s)	53
MspA1I	CMGCKG	1 cut(s)	464
MspI	CCGG	4 cut(s)	132, 202, 253, 327
MspR9I	CCNGG	4 cut(s)	50, 133, 203, 344
MvaI	CCWGG	2 cut(s)	50, 344
NarI	GGCGCC	1 cut(s)	524
NciI	CCSGG	2 cut(s)	133, 203
NcoI	CCATGG	1 cut(s)	477
NdeII	GATC	3 cut(s)	228, 290, 582
NlaIII	CATG	4 cut(s)	103, 481, 616, 697
NlaIV	GGNNCC	2 cut(s)	121, 525
NmeAIII	GCCGAG	4 cut(s)	56, 88, 97, 293
PaeR7I	CTCGAG	1 cut(s)	335
PcsI	WCGNNNNNNNCGW	2 cut(s)	264, 273
PfeI	GAWTC	1 cut(s)	668
PfoI	TCCNGGA	1 cut(s)	342
PkrI	GCNGC	4 cut(s)	130, 208, 466, 496
Ple19I	CGATCG	1 cut(s)	231
PleI	GAGTC	1 cut(s)	388
PluTI	GGCGCC	1 cut(s)	527
PmaCI	CACGTG	1 cut(s)	268
PmlI	CACGTG	1 cut(s)	268
PpsI	GAGTC	1 cut(s)	388
Ppu21I	YACGTR	1 cut(s)	268
Psp124BI	GAGCTC	2 cut(s)	312, 342
Psp6I	CCWGG	2 cut(s)	48, 342
PspCI	CACGTG	1 cut(s)	268
PspFI	CCCAGC	1 cut(s)	658
PspGI	CCWGG	2 cut(s)	48, 342
PspN4I	GGNNCC	2 cut(s)	121, 525
PspPI	GGNCC	1 cut(s)	120
PsuI	RGATCY	2 cut(s)	290, 582
PvuI	CGATCG	1 cut(s)	231
RsaI	GTAC	2 cut(s)	47, 287
RsaNI	GTAC	2 cut(s)	46, 286
SacI	GAGCTC	2 cut(s)	312, 342
SaqAI	TTAA	3 cut(s)	438, 588, 760
SatI	GCNGC	4 cut(s)	129, 207, 465, 495
Sau3AI	GATC	3 cut(s)	228, 290, 582
Sau96I	GGNCC	1 cut(s)	120
SchI	GAGTC	1 cut(s)	389
ScrFI	CCNGG	4 cut(s)	50, 133, 203, 344
SduI	GDGCHC	3 cut(s)	18, 312, 342
SfaNI	GCATC	1 cut(s)	541
SfoI	GGCGCC	1 cut(s)	525
Sfr274I	CTCGAG	1 cut(s)	335
SinI	GGWCC	1 cut(s)	120
SlaI	CTCGAG	1 cut(s)	335
SmlI	CTYRAG	1 cut(s)	335
SmoI	CTYRAG	1 cut(s)	335
Sse9I	AATT	3 cut(s)	330, 559, 589
SsiI	CCGC	5 cut(s)	9, 126, 129, 206, 462
SspDI	GGCGCC	1 cut(s)	523
SstI	GAGCTC	2 cut(s)	312, 342
StyD4I	CCNGG	4 cut(s)	48, 131, 201, 342
StyI	CCWWGG	3 cut(s)	294, 384, 477
TaaI	ACNGT	2 cut(s)	39, 148
TaiI	ACGT	2 cut(s)	189, 270
TaqI	TCGA	6 cut(s)	150, 227, 231, 300, 336, 421
TasI	AATT	3 cut(s)	330, 559, 589
TatI	WGTACW	1 cut(s)	285
TauI	GCSGC	2 cut(s)	131, 209
TfiI	GAWTC	1 cut(s)	668
Tru1I	TTAA	3 cut(s)	438, 588, 760
Tru9I	TTAA	3 cut(s)	438, 588, 760
TscAI	CASTG	2 cut(s)	18, 175
TseI	GCWGC	2 cut(s)	464, 494
TspDTI	ATGAA	2 cut(s)	88, 419
TspRI	CASTG	2 cut(s)	18, 175
VpaK11BI	GGWCC	1 cut(s)	120
XapI	RAATTY	1 cut(s)	330
XhoI	CTCGAG	1 cut(s)	335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.