Prupe.2G012500_v2.0.a1

histone methyltransferase activity (H3-K4 specific)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0010082
Physical Location & Seq
Reverse (-)
1071612 .. 1072638
1027 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G012500.1

Sequence Viewer

Length: 225 bp
ATGATCATGTTGCAGCTGTTCTTCACAGTGGCCTTCTCTGCAGTGCCACTGACTCTGTACGTTCCACCACTCAGAAGCCTAAACCCCTTTGTAGAGACCATGGAGGATCTCTTATCCGAGTCAAGATCATACACCAATAGGGTCTACCCACGTGTACGCCATCTTTGGGTTAGGATCTTGGATTGTTTACTTTGCAGCACAAGGGTTGGACCAGAACTCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

75

Amino Acids

8.65

Weight (kDa)

6.55

Isoelectric Point (pI)

56.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 144
AclWI GGATC 2 cut(s) 114, 182
AcvI CACGTG 1 cut(s) 152
AfaI GTAC 2 cut(s) 59, 156
AfiI CCNNNNNNNGG 1 cut(s) 166
AflIII ACRYGT 1 cut(s) 151
AluBI AGCT 1 cut(s) 16
AluI AGCT 1 cut(s) 16
Alw26I GTCTC 1 cut(s) 89
AlwI GGATC 2 cut(s) 114, 182
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 1 cut(s) 30
ApeKI GCWGC 2 cut(s) 13, 195
AspS9I GGNCC 1 cut(s) 209
AvaI CYCGRG 1 cut(s) 218
AvaII GGWCC 1 cut(s) 209
BbrPI CACGTG 1 cut(s) 152
BbvI GCAGC 2 cut(s) 25, 207
BccI CCATC 1 cut(s) 168
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 89
BfmI CTRYAG 1 cut(s) 39
BisI GCNGC 2 cut(s) 14, 196
BlsI GCNGC 2 cut(s) 15, 197
Bme18I GGWCC 1 cut(s) 209
BmeT110I CYCGRG 1 cut(s) 218
BmgT120I GGNCC 1 cut(s) 209
BsaAI YACGTR 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 89
BsaJI CCNNGG 1 cut(s) 99
Bsc4I CCNNNNNNNGG 1 cut(s) 166
BseDI CCNNGG 1 cut(s) 99
BseLI CCNNNNNNNGG 1 cut(s) 166
BseMII CTCAG 1 cut(s) 85
BseXI GCAGC 2 cut(s) 25, 207
BshFI GGCC 1 cut(s) 32
BsiHKCI CYCGRG 1 cut(s) 218
BslI CCNNNNNNNGG 1 cut(s) 166
BsmAI GTCTC 1 cut(s) 89
BsnI GGCC 1 cut(s) 32
Bso31I GGTCTC 1 cut(s) 89
BsoBI CYCGRG 1 cut(s) 218
Bsp143I GATC 4 cut(s) 3, 106, 125, 174
Bsp19I CCATGG 1 cut(s) 99
BspANI GGCC 1 cut(s) 32
BspCNI CTCAG 1 cut(s) 84
BspMAI CTGCAG 1 cut(s) 43
BspPI GGATC 2 cut(s) 114, 182
BspTNI GGTCTC 1 cut(s) 89
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 4 cut(s) 3, 106, 125, 174
BssT1I CCWWGG 1 cut(s) 99
Bst4CI ACNGT 1 cut(s) 28
BstBAI YACGTR 1 cut(s) 152
BstDEI CTNAG 1 cut(s) 71
BstDSI CCRYGG 1 cut(s) 99
BstKTI GATC 4 cut(s) 6, 109, 128, 177
BstMAI GTCTC 1 cut(s) 89
BstMBI GATC 4 cut(s) 3, 106, 125, 174
BstMWI GCNNNNNNNGC 1 cut(s) 38
BstSFI CTRYAG 1 cut(s) 39
BstV1I GCAGC 2 cut(s) 25, 207
BstX2I RGATCY 2 cut(s) 106, 174
BstYI RGATCY 2 cut(s) 106, 174
BsuRI GGCC 1 cut(s) 32
BtgI CCRYGG 1 cut(s) 99
BtsI GCAGTG 1 cut(s) 48
BtsIMutI CAGTG 3 cut(s) 33, 47, 48
Cfr13I GGNCC 1 cut(s) 209
Csp6I GTAC 2 cut(s) 58, 155
CviAII CATG 2 cut(s) 7, 100
CviJI RGCY 3 cut(s) 16, 32, 78
CviKI_1 RGCY 3 cut(s) 16, 32, 78
CviQI GTAC 2 cut(s) 58, 155
DdeI CTNAG 1 cut(s) 71
DpnI GATC 4 cut(s) 5, 108, 127, 176
DpnII GATC 4 cut(s) 3, 106, 125, 174
Eco130I CCWWGG 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 89
Eco47I GGWCC 1 cut(s) 209
Eco72I CACGTG 1 cut(s) 152
Eco88I CYCGRG 1 cut(s) 218
EcoT14I CCWWGG 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 99
FaeI CATG 2 cut(s) 10, 103
FaiI YATR 3 cut(s) 8, 101, 130
FatI CATG 2 cut(s) 6, 99
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 144
Fnu4HI GCNGC 2 cut(s) 14, 196
Fsp4HI GCNGC 2 cut(s) 14, 196
GluI GCNGC 2 cut(s) 14, 196
HaeIII GGCC 1 cut(s) 32
Hin1II CATG 2 cut(s) 10, 103
HinfI GANTC 2 cut(s) 52, 119
Hpy166II GTNNAC 3 cut(s) 145, 155, 188
Hpy188I TCNGA 2 cut(s) 74, 118
Hpy188III TCNNGA 1 cut(s) 123
Hpy8I GTNNAC 3 cut(s) 145, 155, 188
HpyAV CCTTC 1 cut(s) 43
HpyCH4III ACNGT 1 cut(s) 28
HpyCH4IV ACGT 2 cut(s) 60, 151
HpyCH4V TGCA 3 cut(s) 13, 41, 195
HpyF10VI GCNNNNNNNGC 1 cut(s) 38
HpyF3I CTNAG 1 cut(s) 71
HpySE526I ACGT 2 cut(s) 60, 151
Hsp92II CATG 2 cut(s) 10, 103
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 4 cut(s) 3, 106, 125, 174
Lsp1109I GCAGC 2 cut(s) 25, 207
MaeII ACGT 2 cut(s) 60, 151
MalI GATC 4 cut(s) 5, 108, 127, 176
MboI GATC 4 cut(s) 3, 106, 125, 174
MboII GAAGA 1 cut(s) 13
MflI RGATCY 2 cut(s) 106, 174
MlyI GAGTC 2 cut(s) 46, 128
MmeI TCCRAC 1 cut(s) 187
MnlI CCTC 1 cut(s) 97
MspA1I CMGCKG 1 cut(s) 16
MwoI GCNNNNNNNGC 1 cut(s) 38
NcoI CCATGG 1 cut(s) 99
NdeII GATC 4 cut(s) 3, 106, 125, 174
NlaIII CATG 2 cut(s) 10, 103
PaeR7I CTCGAG 1 cut(s) 218
PkrI GCNGC 2 cut(s) 15, 197
PleI GAGTC 2 cut(s) 46, 127
PmaCI CACGTG 1 cut(s) 152
PmlI CACGTG 1 cut(s) 152
PpsI GAGTC 2 cut(s) 46, 127
Ppu21I YACGTR 1 cut(s) 152
PspCI CACGTG 1 cut(s) 152
PspPI GGNCC 1 cut(s) 209
PspXI VCTCGAGB 1 cut(s) 218
PstI CTGCAG 1 cut(s) 43
PsuI RGATCY 2 cut(s) 106, 174
PvuII CAGCTG 1 cut(s) 16
RsaI GTAC 2 cut(s) 59, 156
RsaNI GTAC 2 cut(s) 58, 155
SatI GCNGC 2 cut(s) 14, 196
Sau3AI GATC 4 cut(s) 3, 106, 125, 174
Sau96I GGNCC 1 cut(s) 209
SchI GAGTC 2 cut(s) 46, 128
SetI ASST 3 cut(s) 18, 63, 154
SfcI CTRYAG 1 cut(s) 39
Sfr274I CTCGAG 1 cut(s) 218
SgeI CNNG 8 cut(s) 19, 112, 130, 135, 162, 164, 190, 213
SinI GGWCC 1 cut(s) 209
SlaI CTCGAG 1 cut(s) 218
SmlI CTYRAG 1 cut(s) 218
SmoI CTYRAG 1 cut(s) 218
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 1 cut(s) 28
TaiI ACGT 2 cut(s) 63, 154
TaqI TCGA 1 cut(s) 219
TscAI CASTG 3 cut(s) 33, 48, 54
TseI GCWGC 2 cut(s) 13, 195
TspRI CASTG 3 cut(s) 33, 48, 54
VpaK11BI GGWCC 1 cut(s) 209
XhoI CTCGAG 1 cut(s) 218
XmiI GTMKAC 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.