Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005788

Physical Location & Seq

Genomic Coordinates Forward (+)

2051201 .. 2056032

Gene Structure 4832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G020600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2715 bp

ATGGCTGCTCTGGCTCACGCCCTGCTCGGCATTCCATCTCGGTGTGGTCTTTGCCGAGCCATTAATCCCAAGGAAGATTTCAAGGTCTGCGCTTGGGGGTTTTCCAGAACAGCAAGTAGCTCTGGAATCTGTATTTCTAGGGTTCCAAGGAGGAAGAATGGTAATCTCACCTGCCCTTGGACGCTGAATGCAGTTCAAACCCTCATCGTCCACAATGCTCCAGCTCAGGCCACTGTTGAAATCCCGGTTACCTATCACCAGCTTATTGGTGTTCCTGATCAAGCTGAGAAAGATGAGGTTGTTAAATCAGTAATGGATATGAAGACTGCTCAAATGGATGATGGTTACACCATAGATGCTGTTAAATCTCGCCAGGATCTCTTAATGGATGTGAGAGAAAAGCTTATTTTTGGACCAGAATATTCTGGTAATTATAAGGGAAAGGTTCCACCTAAATCTTCCCTTCGAATCCCTTGGGCATGGTTGCCAGCTGTTCTTTGCCTGCTTCAAGAGGTTGGTGAAGTAAAGCTTGTGCAAGATATTGGTCAGGCAGCTGTTCGGCATCCAGATGCCAAGCCATATATTCACGATCTTCTTCTTTCTATGGCACTAGCTGAGTGCGCAACTGCAAAGATTGGGTTTGAAAAGAACAGGGTGTCCCAAGGATTTGAAGCTCTTGCTCGTGCTCAGTGTCTTCTAAGGAGTAAAAAGTCTCTTGAGAAAATATCATTGTTATCTCAGATTGACAAAGCTAAAGCTATATGTGAGTGTCTTATTGCATCAGAAGGTAATGATCTGAAAATTGCGGAAGCTTTTAGCCTGTTTCTTCTTGGTCAGGGTAATGAGGCTGGAATTGTTGAAAAGCTTCAGAAGCTTGATGTGAACAAAAATAAGTTAATACAGTCTCTATGTAAACAAGGAAACCTCAGAGAAGCCCTGCAATTCCTCCCACACGAGCCCAACCCGTCCCAACAGACCTATGAAATCTTAATACTCTCTTGCACCCGCCATAAATCTCTCTCTGATGGGCTTGACGTGCATCGCCACCTTGTAGAAGGTGGGTGGGACCAAGACCCTTTTCTGGCTACCAAACTCATAGAGATGTACTCAGAATTGGACTCTATTGACAATGCACGTAAGGTGTTTGGTAAAACTCGTAAAAGAACTATTTATATGTGGAATGCACTCTTCAGAGCACTTACGTTGGCAGGTCATGGAACTGAGGTACTAGATTTGTATCAACGAATGAATGCACTTGGGGTTTCATCTGATCGTTTTACTTATACGTATGCAATCAAAGCTTGTGTTGTCTCAGAGTGTTTGAGTTCATTCCTCCAGAAAGGGAAGGAGATTCATGGACATATTTTGCGGCATGGATATGGGGCACATGTTCATGTTATGACCACTTTGTTGGATATGTATGCGAGGTTCGGGTGTGTTTCTTATGCCAGTAGTGTGTTTGATCAGATGCAGATTAGAAATGTAGTTTCATGGAGTGCTATGATTGCATGCTATGCAAAGAATGGGAGGCCTTATGAAGCCTTGGAACTGTTTCGGGAAATGATACTTGAGGCCCATGATTTGTTACCCAATTCTGTGACAATGGTTAGTGTGCTTCAAGCTTGTGCAGCTCTTACTGCTCTGGAGCAGGGGAGGTTCCTTCATGGATATATCCTCAGAAGAAGTCTTGATTCAATCCTTCCAGTTATGAGTACCCTTATCACAATGTATGCCAGATGCGGTAAGCTTGACTTGGGCGAACGAGTTTTCAGCATGATGAATAAGAAGGATGTTGTTTCATGGAATTCTTTGATTTCAAGTTATGGCGTTCATGGATATGGAAAGAAGGCAATTCAAATTTTTGAAGACATGGTCTATCATGGAGTATCACCGAGTCACATTTCATTCGTTAGTGTCTTGGGCGCGTGTAGTCACGCAGGTCTTGTTGAAGAGGGGAAGATGTTGTTCAATTCTATGGTAAAAGAACATGGAGTATATCCCAGCGTTGAGCACTATGCTTGCATGGTGGATCTGCTTGGTCGTGCCAATCGGTTCGATGAAGCAGCCAAAGTCATAGAAGATATGCGGATTGAACCAGGTGCTAAGGTTTGGGGTGCTCTTCTTGGATCATGTAGAATACATTGTAATGTTGAGCTGGCGGAGAGAGCAAGTAAAAGGCTATTTGAGCTTGAGCCTAGGAATGCTGGGAATTATGTACTTCTAGCTGATATTTATGCTGAAGCCAAGATGTGGGATGAGGTAAAAAGAGTGAAGAAGCTTTTAGAAGCTCGAGAACTACAAAAGGTCCCAGGTCGGAGTTGGATTGAAGTTAAAAGGAAGATATACTCATTCATTTCGGTTGATGAGTTTAACCCACAGATGGAGCAGCTCCATGCATTGTTGGCTGAATTGTCAACAGAGATGAAGGACAGAGGATATAAGCCGCAAACTAAAGTTGTCCTATATGATCTTGATGAGGAAGAGAAGGAACGAATAGTATTAGGCCATAGTGAAAAATTAGCAGTTGCATTCGGACTCATAAATACCAAAAGGGGGGAAACTATTCGGATTTCCAAGAACTTGAGGTTATGCGAAGATTGTCACTATGTTACGAAGTTCATTTCCAAGTTTGCCGATAGAGAGATTCTGGTTCGAGATGTGAATCGCTTTCACCATTTCCGTGATGGGGTTTGTTCATGTGGGGATTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0031425 GO:0031426 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

905

Amino Acids

101.64

Weight (kDa)

8.38

Isoelectric Point (pI)

43.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46790
fragaria_vesca	FvH4_7g01510 FvH4_7g01510 FvH4_7g01510 FvH4_7g01510 FvH4_7g01510
malus_domestica	MD02G1305500.v1.1 MD07G1020200.v1.1
prunus_persica	Prupe.2G020600_v2.0.a1 Prupe.2G020600_v2.0.a1 Prupe.2G020600_v2.0.a1
pyrus_communis	pycom02g25600
rosa_chinensis	RchiOBHm_Chr1g0317361
rosa_laevigata	RLG00000029567 RLG00000030602 RLG00000030604
rosa_multiflora	Rmu_co8304249.1_g000001 Rmu_sc0005092.1_g000005 Rmu_sc0009583.1_g000011 Rmu_sc0032747.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330460 Rroxscaffold_4G00330470
rosa_rugosa	Rorug01G0016100
rosa_samantha	Rh1AG027400 Rh1BG023300 Rh1CG025400 Rh1DG045700
rosa_wichuraiana	Rw1G001930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	435
AarI	CACCTGC	1 cut(s)	179
Acc16I	TGCGCA	1 cut(s)	622
Acc36I	ACCTGC	3 cut(s)	179, 1199, 1928
AccB7I	CCANNNNNTGG	1 cut(s)	2250
AccII	CGCG	1 cut(s)	1925
AciI	CCGC	7 cut(s)	806, 1006, 1369, 1740, 2086, 2159, 2444
AclWI	GGATC	3 cut(s)	384, 2037, 2134
AcsI	RAATTY	2 cut(s)	1804, 1857
AcuI	CTGAAG	3 cut(s)	851, 1174, 2259
AfaI	GTAC	4 cut(s)	1106, 1227, 1714, 2217
AfiI	CCNNNNNNNGG	6 cut(s)	177, 1081, 2250, 2380, 2553, 2686
AflIII	ACRYGT	1 cut(s)	1387
AjiI	CACGTC	1 cut(s)	1036
AjnI	CCWGG	3 cut(s)	372, 2095, 2308
AjuI	GAANNNNNNNTTGG	4 cut(s)	62, 94, 1062, 1094
AloI	GAACNNNNNNTCC	2 cut(s)	641, 673
Alw21I	GWGCWC	4 cut(s)	688, 1198, 2013, 2119
Alw26I	GTCTC	3 cut(s)	717, 909, 1315
AlwI	GGATC	3 cut(s)	384, 2037, 2134
Ama87I	CYCGRG	1 cut(s)	2289
AoxI	GGCC	4 cut(s)	228, 1529, 1572, 2503
ApeKI	GCWGC	5 cut(s)	5, 551, 1628, 2063, 2386
ApoI	RAATTY	2 cut(s)	1804, 1857
AseI	ATTAAT	1 cut(s)	63
Asp700I	GAANNNNTTC	3 cut(s)	864, 1551, 2562
AspA2I	CCTAGG	1 cut(s)	2195
AspLEI	GCGC	3 cut(s)	92, 623, 1925
AspS9I	GGNCC	4 cut(s)	413, 1066, 1573, 2305
AsuC2I	CCSGG	1 cut(s)	245
AsuHPI	GGTGA	5 cut(s)	160, 248, 530, 1881, 2663
AsuII	TTCGAA	1 cut(s)	466
AvaI	CYCGRG	1 cut(s)	2289
AvaII	GGWCC	3 cut(s)	413, 1066, 2305
AvrII	CCTAGG	1 cut(s)	2195
BaeGI	GKGCMC	1 cut(s)	1387
BanII	GRGCYC	1 cut(s)	960
BauI	CACGAG	2 cut(s)	681, 953
BbsI	GAAGAC	3 cut(s)	329, 686, 1872
Bbv12I	GWGCWC	4 cut(s)	688, 1198, 2013, 2119
BbvI	GCAGC	4 cut(s)	563, 1640, 2075, 2398
BccI	CCATC	5 cut(s)	43, 335, 1019, 2374, 2678
BciT130I	CCWGG	3 cut(s)	374, 2097, 2310
BclI	TGATCA	2 cut(s)	277, 1462
BcnI	CCSGG	1 cut(s)	245
BcoDI	GTCTC	3 cut(s)	717, 909, 1315
BfaI	CTAG	5 cut(s)	138, 611, 1229, 2196, 2222
BfuAI	ACCTGC	3 cut(s)	179, 1199, 1928
BisI	GCNGC	7 cut(s)	6, 552, 1370, 1629, 2064, 2387, 2444
BlnI	CCTAGG	1 cut(s)	2195
BlsI	GCNGC	7 cut(s)	7, 553, 1371, 1630, 2065, 2388, 2445
Bme1390I	CCNGG	4 cut(s)	245, 374, 2097, 2310
Bme18I	GGWCC	3 cut(s)	413, 1066, 2305
BmeT110I	CYCGRG	1 cut(s)	2289
BmgBI	CACGTC	1 cut(s)	1036
BmgT120I	GGNCC	4 cut(s)	413, 1066, 1573, 2305
BmiI	GGNNCC	5 cut(s)	144, 447, 1067, 1658, 2307
BmrFI	CCNGG	4 cut(s)	245, 374, 2097, 2310
BmsI	GCATC	7 cut(s)	346, 559, 571, 788, 1048, 1458, 1727
BpiI	GAAGAC	3 cut(s)	329, 686, 1872
BplI	GAGNNNNNCTC	2 cut(s)	1091, 1123
BpmI	CTGGAG	3 cut(s)	204, 1319, 1664
Bpu10I	CCTNAGC	2 cut(s)	225, 2103
Bpu14I	TTCGAA	1 cut(s)	466
BpuEI	CTTGAG	4 cut(s)	737, 1589, 2210, 2602
BpuMI	CCSGG	1 cut(s)	245
BsaAI	YACGTR	2 cut(s)	1136, 1287
BsaBI	GATNNNNATC	2 cut(s)	1236, 2661
BsaJI	CCNNGG	8 cut(s)	69, 146, 176, 473, 661, 1542, 2195, 2308
Bsc4I	CCNNNNNNNGG	6 cut(s)	177, 1081, 2250, 2380, 2553, 2686
Bse1I	ACTGG	2 cut(s)	1449, 1703
Bse8I	GATNNNNATC	2 cut(s)	1236, 2661
BseBI	CCWGG	3 cut(s)	374, 2097, 2310
BseDI	CCNNGG	8 cut(s)	69, 146, 176, 473, 661, 1542, 2195, 2308
BseGI	GGATG	5 cut(s)	343, 394, 562, 1795, 2260
BseJI	GATNNNNATC	2 cut(s)	1236, 2661
BseLI	CCNNNNNNNGG	6 cut(s)	177, 1081, 2250, 2380, 2553, 2686
BseNI	ACTGG	2 cut(s)	1449, 1703
BseSI	GKGCMC	1 cut(s)	1387
BseXI	GCAGC	4 cut(s)	563, 1640, 2075, 2398
BseYI	CCCAGC	2 cut(s)	2000, 2204
BsgI	GTGCAG	1 cut(s)	1647
Bsh1236I	CGCG	1 cut(s)	1925
BshFI	GGCC	4 cut(s)	230, 1531, 1574, 2505
BsiHKAI	GWGCWC	4 cut(s)	688, 1198, 2013, 2119
BsiHKCI	CYCGRG	1 cut(s)	2289
BsiSI	CCGG	1 cut(s)	245
BslFI	GGGAC	4 cut(s)	643, 952, 1079, 2291
BslI	CCNNNNNNNGG	6 cut(s)	177, 1081, 2250, 2380, 2553, 2686
BsmAI	GTCTC	3 cut(s)	717, 909, 1315
BsmFI	GGGAC	4 cut(s)	643, 952, 1079, 2291
BsmI	GAATGC	6 cut(s)	30, 193, 1186, 1255, 2206, 2528
BsnI	GGCC	4 cut(s)	230, 1531, 1574, 2505
BsoBI	CYCGRG	1 cut(s)	2289
Bsp119I	TTCGAA	1 cut(s)	466
Bsp1286I	GDGCHC	6 cut(s)	688, 960, 1198, 1387, 2013, 2119
Bsp143I	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
BspACI	CCGC	7 cut(s)	806, 1006, 1369, 1740, 2086, 2159, 2444
BspANI	GGCC	4 cut(s)	230, 1531, 1574, 2505
BspFNI	CGCG	1 cut(s)	1925
BspLI	GGNNCC	5 cut(s)	144, 447, 1067, 1658, 2307
BspMI	ACCTGC	3 cut(s)	179, 1199, 1928
BspPI	GGATC	3 cut(s)	384, 2037, 2134
BspQI	GCTCTTC	1 cut(s)	2124
BspT104I	TTCGAA	1 cut(s)	466
BsrI	ACTGG	2 cut(s)	1449, 1703
BssECI	CCNNGG	8 cut(s)	69, 146, 176, 473, 661, 1542, 2195, 2308
BssMI	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
BssSI	CACGAG	2 cut(s)	681, 953
BssT1I	CCWWGG	7 cut(s)	69, 146, 176, 473, 661, 1542, 2195
Bst2BI	CACGAG	2 cut(s)	681, 953
Bst2UI	CCWGG	3 cut(s)	374, 2097, 2310
Bst4CI	ACNGT	3 cut(s)	235, 903, 1551
Bst6I	CTCTTC	4 cut(s)	1193, 1944, 2124, 2475
BstAPI	GCANNNNNTGC	1 cut(s)	1514
BstBAI	YACGTR	2 cut(s)	1136, 1287
BstBI	TTCGAA	1 cut(s)	466
BstC8I	GCNNGC	5 cut(s)	489, 503, 1510, 2020, 2157
BstEII	GGTNACC	1 cut(s)	247
BstF5I	GGATG	5 cut(s)	343, 394, 562, 1795, 2260
BstFNI	CGCG	1 cut(s)	1925
BstHHI	GCGC	3 cut(s)	92, 623, 1925
BstKTI	GATC	9 cut(s)	280, 379, 592, 796, 1273, 1465, 2032, 2129, 2470
BstMAI	GTCTC	3 cut(s)	717, 909, 1315
BstMBI	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
BstNI	CCWGG	3 cut(s)	374, 2097, 2310
BstNSI	RCATGY	2 cut(s)	1391, 1512
BstPI	GGTNACC	1 cut(s)	247
BstSCI	CCNGG	4 cut(s)	243, 372, 2095, 2308
BstSLI	GKGCMC	1 cut(s)	1387
BstSNI	TACGTA	1 cut(s)	1287
BstUI	CGCG	1 cut(s)	1925
BstV1I	GCAGC	4 cut(s)	563, 1640, 2075, 2398
BstV2I	GAAGAC	3 cut(s)	329, 686, 1872
BstX2I	RGATCY	2 cut(s)	376, 2029
BstXI	CCANNNNNNTGG	2 cut(s)	266, 1411
BstYI	RGATCY	2 cut(s)	376, 2029
BsuRI	GGCC	4 cut(s)	230, 1531, 1574, 2505
BtgZI	GCGATG	1 cut(s)	1025
BtrI	CACGTC	1 cut(s)	1036
BtsCI	GGATG	5 cut(s)	343, 394, 562, 1795, 2260
BtsIMutI	CAGTG	2 cut(s)	231, 695
BveI	ACCTGC	3 cut(s)	179, 1199, 1928
Cac8I	GCNNGC	5 cut(s)	489, 503, 1510, 2020, 2157
CfoI	GCGC	3 cut(s)	92, 623, 1925
Cfr13I	GGNCC	4 cut(s)	413, 1066, 1573, 2305
CseI	GACGC	1 cut(s)	190
CsiI	ACCWGGT	1 cut(s)	2095
Csp6I	GTAC	4 cut(s)	1105, 1226, 1713, 2216
CviQI	GTAC	4 cut(s)	1105, 1226, 1713, 2216
DpnI	GATC	9 cut(s)	279, 378, 591, 795, 1272, 1464, 2031, 2128, 2469
DpnII	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
Eam1104I	CTCTTC	4 cut(s)	1193, 1944, 2124, 2475
EarI	CTCTTC	4 cut(s)	1193, 1944, 2124, 2475
EciI	GGCGGA	1 cut(s)	2174
Eco105I	TACGTA	1 cut(s)	1287
Eco130I	CCWWGG	7 cut(s)	69, 146, 176, 473, 661, 1542, 2195
Eco147I	AGGCCT	1 cut(s)	1531
Eco24I	GRGCYC	1 cut(s)	960
Eco47I	GGWCC	3 cut(s)	413, 1066, 2305
Eco57I	CTGAAG	3 cut(s)	851, 1174, 2259
Eco88I	CYCGRG	1 cut(s)	2289
Eco91I	GGTNACC	1 cut(s)	247
EcoO109I	RGGNCCY	1 cut(s)	2305
EcoO65I	GGTNACC	1 cut(s)	247
EcoRI	GAATTC	1 cut(s)	1804
EcoRII	CCWGG	3 cut(s)	372, 2095, 2308
EcoT14I	CCWWGG	7 cut(s)	69, 146, 176, 473, 661, 1542, 2195
EcoT22I	ATGCAT	1 cut(s)	2398
EcoT38I	GRGCYC	1 cut(s)	960
ErhI	CCWWGG	7 cut(s)	69, 146, 176, 473, 661, 1542, 2195
FalI	AAGNNNNNCTT	4 cut(s)	513, 545, 1736, 1768
FaqI	GGGAC	4 cut(s)	643, 952, 1079, 2291
FauI	CCCGC	1 cut(s)	1013
FbaI	TGATCA	2 cut(s)	277, 1462
Fnu4HI	GCNGC	7 cut(s)	6, 552, 1370, 1629, 2064, 2387, 2444
FokI	GGATG	5 cut(s)	350, 401, 549, 1802, 2267
FriOI	GRGCYC	1 cut(s)	960
Fsp4HI	GCNGC	7 cut(s)	6, 552, 1370, 1629, 2064, 2387, 2444
FspBI	CTAG	5 cut(s)	138, 611, 1229, 2196, 2222
FspI	TGCGCA	1 cut(s)	622
GlaI	GCGC	3 cut(s)	91, 622, 1924
GluI	GCNGC	7 cut(s)	6, 552, 1370, 1629, 2064, 2387, 2444
GsaI	CCCAGC	2 cut(s)	2004, 2208
GsuI	CTGGAG	3 cut(s)	204, 1319, 1664
HaeIII	GGCC	4 cut(s)	230, 1531, 1574, 2505
HapII	CCGG	1 cut(s)	245
HgaI	GACGC	1 cut(s)	190
HhaI	GCGC	3 cut(s)	92, 623, 1925
Hin6I	GCGC	3 cut(s)	90, 621, 1923
HinP1I	GCGC	3 cut(s)	90, 621, 1923
HincII	GTYRAC	1 cut(s)	2415
HindII	GTYRAC	1 cut(s)	2415
HindIII	AAGCTT	9 cut(s)	401, 527, 810, 863, 872, 1299, 1620, 1745, 2276
HinfI	GANTC	9 cut(s)	126, 468, 1118, 1351, 1691, 1894, 2535, 2644, 2662
HpaII	CCGG	1 cut(s)	245
HphI	GGTGA	5 cut(s)	160, 248, 530, 1881, 2663
Hpy166II	GTNNAC	4 cut(s)	211, 883, 914, 2415
Hpy8I	GTNNAC	4 cut(s)	211, 883, 914, 2415
HpyCH4III	ACNGT	3 cut(s)	235, 903, 1551
HpyCH4IV	ACGT	4 cut(s)	1035, 1135, 1202, 1286
HpySE526I	ACGT	4 cut(s)	1035, 1135, 1202, 1286
HspAI	GCGC	3 cut(s)	90, 621, 1923
Ksp22I	TGATCA	2 cut(s)	277, 1462
Kzo9I	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
LguI	GCTCTTC	1 cut(s)	2124
LmnI	GCTCC	4 cut(s)	223, 1645, 2383, 2394
Lsp1109I	GCAGC	4 cut(s)	563, 1640, 2075, 2398
LweI	GCATC	7 cut(s)	346, 559, 571, 788, 1048, 1458, 1727
MabI	ACCWGGT	1 cut(s)	2095
MaeI	CTAG	5 cut(s)	138, 611, 1229, 2196, 2222
MaeII	ACGT	4 cut(s)	1035, 1135, 1202, 1286
MaeIII	GTNAC	8 cut(s)	247, 344, 1584, 1597, 1895, 1931, 2600, 2608
MalI	GATC	9 cut(s)	279, 378, 591, 795, 1272, 1464, 2031, 2128, 2469
MboI	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
MflI	RGATCY	2 cut(s)	376, 2029
MhlI	GDGCHC	6 cut(s)	688, 960, 1198, 1387, 2013, 2119
MlyI	GAGTC	3 cut(s)	1112, 1903, 2529
MmeI	TCCRAC	3 cut(s)	1392, 2294, 2300
Mph1103I	ATGCAT	1 cut(s)	2398
MroXI	GAANNNNTTC	3 cut(s)	864, 1551, 2562
MseI	TTAA	8 cut(s)	63, 303, 363, 383, 896, 989, 2331, 2370
MslI	CAYNNNNRTG	8 cut(s)	40, 567, 1100, 1377, 1392, 1836, 2145, 2679
MspA1I	CMGCKG	2 cut(s)	491, 554
MspI	CCGG	1 cut(s)	245
MspR9I	CCNGG	4 cut(s)	245, 374, 2097, 2310
Mva1269I	GAATGC	6 cut(s)	30, 193, 1186, 1255, 2206, 2528
MvaI	CCWGG	3 cut(s)	374, 2097, 2310
MvnI	CGCG	1 cut(s)	1925
NciI	CCSGG	1 cut(s)	245
NdeII	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
NlaIV	GGNNCC	5 cut(s)	144, 447, 1067, 1658, 2307
NmeAIII	GCCGAG	2 cut(s)	6, 80
NmuCI	GTSAC	4 cut(s)	1597, 1895, 1931, 2600
NsbI	TGCGCA	1 cut(s)	622
NsiI	ATGCAT	1 cut(s)	2398
NspI	RCATGY	2 cut(s)	1391, 1512
NspV	TTCGAA	1 cut(s)	466
PaeI	GCATGC	1 cut(s)	1512
PaeR7I	CTCGAG	1 cut(s)	2289
PaqCI	CACCTGC	1 cut(s)	179
PceI	AGGCCT	1 cut(s)	1531
PciI	ACATGT	1 cut(s)	1387
PciSI	GCTCTTC	1 cut(s)	2124
PctI	GAATGC	6 cut(s)	30, 193, 1186, 1255, 2206, 2528
PdmI	GAANNNNTTC	3 cut(s)	864, 1551, 2562
PfeI	GAWTC	6 cut(s)	126, 468, 1351, 1691, 2644, 2662
PflFI	GACNNNGTC	1 cut(s)	1871
PflMI	CCANNNNNTGG	1 cut(s)	2250
PkrI	GCNGC	7 cut(s)	7, 553, 1371, 1630, 2065, 2388, 2445
PleI	GAGTC	3 cut(s)	1112, 1902, 2529
PpsI	GAGTC	3 cut(s)	1112, 1902, 2529
Ppu21I	YACGTR	2 cut(s)	1136, 1287
PpuMI	RGGWCCY	1 cut(s)	2305
PscI	ACATGT	1 cut(s)	1387
PshBI	ATTAAT	1 cut(s)	63
PsiI	TTATAA	1 cut(s)	435
Psp5II	RGGWCCY	1 cut(s)	2305
Psp6I	CCWGG	3 cut(s)	372, 2095, 2308
PspEI	GGTNACC	1 cut(s)	247
PspFI	CCCAGC	2 cut(s)	2000, 2204
PspGI	CCWGG	3 cut(s)	372, 2095, 2308
PspN4I	GGNNCC	5 cut(s)	144, 447, 1067, 1658, 2307
PspPI	GGNCC	4 cut(s)	413, 1066, 1573, 2305
PspPPI	RGGWCCY	1 cut(s)	2305
PsrI	GAACNNNNNNTAC	2 cut(s)	1412, 1444
PsuI	RGATCY	2 cut(s)	376, 2029
PsyI	GACNNNGTC	1 cut(s)	1871
PvuII	CAGCTG	2 cut(s)	491, 554
RsaI	GTAC	4 cut(s)	1106, 1227, 1714, 2217
RsaNI	GTAC	4 cut(s)	1105, 1226, 1713, 2216
RseI	CAYNNNNRTG	8 cut(s)	40, 567, 1100, 1377, 1392, 1836, 2145, 2679
SapI	GCTCTTC	1 cut(s)	2124
SaqAI	TTAA	8 cut(s)	63, 303, 363, 383, 896, 989, 2331, 2370
SatI	GCNGC	7 cut(s)	6, 552, 1370, 1629, 2064, 2387, 2444
Sau3AI	GATC	9 cut(s)	277, 376, 589, 793, 1270, 1462, 2029, 2126, 2467
Sau96I	GGNCC	4 cut(s)	413, 1066, 1573, 2305
SchI	GAGTC	3 cut(s)	1112, 1903, 2529
ScrFI	CCNGG	4 cut(s)	245, 374, 2097, 2310
SduI	GDGCHC	6 cut(s)	688, 960, 1198, 1387, 2013, 2119
SexAI	ACCWGGT	1 cut(s)	2095
SfaNI	GCATC	7 cut(s)	346, 559, 571, 788, 1048, 1458, 1727
Sfr274I	CTCGAG	1 cut(s)	2289
SfuI	TTCGAA	1 cut(s)	466
SinI	GGWCC	3 cut(s)	413, 1066, 2305
SlaI	CTCGAG	1 cut(s)	2289
SmiMI	CAYNNNNRTG	8 cut(s)	40, 567, 1100, 1377, 1392, 1836, 2145, 2679
SmlI	CTYRAG	5 cut(s)	716, 1568, 2189, 2289, 2581
SmoI	CTYRAG	5 cut(s)	716, 1568, 2189, 2289, 2581
SnaBI	TACGTA	1 cut(s)	1287
SphI	GCATGC	1 cut(s)	1512
SseBI	AGGCCT	1 cut(s)	1531
SsiI	CCGC	7 cut(s)	806, 1006, 1369, 1740, 2086, 2159, 2444
SspI	AATATT	1 cut(s)	422
SspMI	CTAG	5 cut(s)	138, 611, 1229, 2196, 2222
StuI	AGGCCT	1 cut(s)	1531
StyD4I	CCNGG	4 cut(s)	243, 372, 2095, 2308
StyI	CCWWGG	7 cut(s)	69, 146, 176, 473, 661, 1542, 2195
TaaI	ACNGT	3 cut(s)	235, 903, 1551
TaiI	ACGT	4 cut(s)	1038, 1138, 1205, 1289
TaqI	TCGA	4 cut(s)	466, 2055, 2290, 2653
TatI	WGTACW	2 cut(s)	1104, 2215
TauI	GCSGC	2 cut(s)	1372, 2446
TfiI	GAWTC	6 cut(s)	126, 468, 1351, 1691, 2644, 2662
Tru1I	TTAA	8 cut(s)	63, 303, 363, 383, 896, 989, 2331, 2370
Tru9I	TTAA	8 cut(s)	63, 303, 363, 383, 896, 989, 2331, 2370
TscAI	CASTG	2 cut(s)	238, 695
TseFI	GTSAC	4 cut(s)	1597, 1895, 1931, 2600
TseI	GCWGC	5 cut(s)	5, 551, 1628, 2063, 2386
Tsp45I	GTSAC	4 cut(s)	1597, 1895, 1931, 2600
TspGWI	ACGGA	1 cut(s)	2669
TspRI	CASTG	2 cut(s)	238, 695
Tth111I	GACNNNGTC	1 cut(s)	1871
Van91I	CCANNNNNTGG	1 cut(s)	2250
VpaK11BI	GGWCC	3 cut(s)	413, 1066, 2305
VspI	ATTAAT	1 cut(s)	63
XapI	RAATTY	2 cut(s)	1804, 1857
XceI	RCATGY	2 cut(s)	1391, 1512
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2316, 2681
XhoI	CTCGAG	1 cut(s)	2289
XmaJI	CCTAGG	1 cut(s)	2195
XmnI	GAANNNNTTC	3 cut(s)	864, 1551, 2562
XspI	CTAG	5 cut(s)	138, 611, 1229, 2196, 2222
Zsp2I	ATGCAT	1 cut(s)	2398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.