Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0005788

Physical Location & Seq

Genomic Coordinates Reverse (-)

7476360 .. 7479107

Gene Structure 2748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG045700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGGCTGCTCTGGCTCACGCCCTGCTCGGAATCATCCCAGCTCGGTGTGGTCTCTGCCGAGCCATTTATCCCAACCTCTGCTGCTCTTGGCGCCCTTCACCTAATCCCTCTGGATTCTCCGTTTCCAGTAGGACCCACCTTGCTAATCTCACCGCCCGGTCCAGACTCAACGCCGCCCACACCCTCACCGTCCACAATGCCTCCGCTCCCACCACTCTTGAAATCCCCGTCACCTGTTACCAGCTTATTGGTGTTCCTGATCAAGCTGAGAAAGATGAGGTTATTAAAGCGGTAATGGATTTGAAGAATTCTGAAGTTGAAGAGGGTTATACTGAGAATGCTATTAAATCTCGGCAGGATCTCTTAATGGATGTGAGAGATAAGCTTATTTTTGAACCAGAATGTGCTGGTAATAGTAATGAAAATACCCGACCTAAATCTGCTCTTCAAATCCCTTGGGCATGGCTGGCAGCTGCTCTTTGCCTCCTTCAGGAGGTTAGGGAAGTAGAGCTTGTGCTAGATATTGGTCAAGCAGCTATTAAGCATCCAGATGCTAAGCCATATATTCATGATATTCTACTTTCTATGGCACTGGCTGAGTGTGCAACTGCAATGATTGGTTTTGAGAGCAACAAAGTGTCCCAGGGATTTGTAGCTATTTCTCGTGCTCAGAGTCTTCTAAGAAGTAAAAAATCTCTTGAGAAAATATCATTTTTATCTAAGATTGACAGAGCTAAAACTATGTGTGAGTGTCTGATTGCATCAGAGCTTACTGATCTGAAACTAGAGGAAGCTCTTACGCTGTTTCTTCTCGGTAAGGATAATGAGGCTGCAGTTGTTGAAAAGCTGAAGAAGCTTGATGGAAGCAAAAACCAATTAATACAGTCTTTATGCAAACAAGGCGACCTCAAGCTAGCTCTTCAACTTTTTCCTCACGAACCCAACCCCTCCCAACAGACCTGTGAGTTCTTAATCCTTTCTTGCATCCGCCAGGATTCTCTCTCTGATGGGTTAGACGTGCATCGCCACCTTGTTGATGGTGGGTGGGACCAAGACCCTTTTTTGGCCACCAAACTTATAGGGATGTACTCTGAGTTGGACTCCATCGAGAATGCACGTGAAGTATTCGATAAAACTCGTAAAAGAACTATTTATATGTGGAATGCACTTTTTAGAGCCCTTACGTTGGCTGGCCATGGAACTGAGAGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0031425 GO:0031426 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

404

Amino Acids

44.77

Weight (kDa)

6.1

Isoelectric Point (pI)

43.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm_PDR	PF25515	150 - 235	2.8e-23	Plastid division regulator ARM repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46790
fragaria_vesca	FvH4_7g01510 FvH4_7g01510 FvH4_7g01510 FvH4_7g01510 FvH4_7g01510
malus_domestica	MD02G1305500.v1.1 MD07G1020200.v1.1
prunus_persica	Prupe.2G020600_v2.0.a1 Prupe.2G020600_v2.0.a1 Prupe.2G020600_v2.0.a1
pyrus_communis	pycom02g25600
rosa_chinensis	RchiOBHm_Chr1g0317361
rosa_laevigata	RLG00000029567 RLG00000030602 RLG00000030604
rosa_multiflora	Rmu_co8304249.1_g000001 Rmu_sc0005092.1_g000005 Rmu_sc0009583.1_g000011 Rmu_sc0032747.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330460 Rroxscaffold_4G00330470
rosa_rugosa	Rorug01G0016100
rosa_samantha	Rh1AG027400 Rh1BG023300 Rh1CG025400 Rh1DG045700
rosa_wichuraiana	Rw1G001930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	90
AccBSI	CCGCTC	1 cut(s)	206
AciI	CCGC	5 cut(s)	153, 174, 204, 290, 988
AclWI	GGATC	1 cut(s)	366
AcoI	YGGCCR	2 cut(s)	1065, 1192
AcsI	RAATTY	1 cut(s)	307
AcuI	CTGAAG	3 cut(s)	333, 473, 869
AcvI	CACGTG	1 cut(s)	1118
AcyI	GRCGYC	1 cut(s)	91
AfaI	GTAC	1 cut(s)	1088
AfiI	CCNNNNNNNGG	4 cut(s)	490, 493, 1063, 1186
AgsI	TTSAA	7 cut(s)	221, 304, 320, 395, 449, 842, 923
AjiI	CACGTC	1 cut(s)	1018
AjnI	CCWGG	2 cut(s)	642, 990
Alw21I	GWGCWC	1 cut(s)	670
Alw26I	GTCTC	1 cut(s)	56
AlwI	GGATC	1 cut(s)	366
AoxI	GGCC	2 cut(s)	1065, 1192
ApeKI	GCWGC	6 cut(s)	5, 81, 470, 473, 533, 830
ApoI	RAATTY	1 cut(s)	307
AseI	ATTAAT	1 cut(s)	878
AspLEI	GCGC	1 cut(s)	93
AspS9I	GGNCC	3 cut(s)	132, 159, 1048
AsuC2I	CCSGG	1 cut(s)	157
AsuHPI	GGTGA	4 cut(s)	90, 142, 178, 223
AsuNHI	GCTAGC	1 cut(s)	913
AvaII	GGWCC	3 cut(s)	132, 159, 1048
BalI	TGGCCA	2 cut(s)	1067, 1194
BanI	GGYRCC	1 cut(s)	90
BanII	GRGCYC	1 cut(s)	1180
BauI	CACGAG	1 cut(s)	663
BbrPI	CACGTG	1 cut(s)	1118
BbsI	GAAGAC	1 cut(s)	668
Bbv12I	GWGCWC	1 cut(s)	670
BbvI	GCAGC	5 cut(s)	68, 460, 482, 545, 817
BccI	CCATC	4 cut(s)	854, 1001, 1031, 1112
BciT130I	CCWGG	2 cut(s)	644, 992
BclI	TGATCA	1 cut(s)	259
BcnI	CCSGG	1 cut(s)	157
BcoDI	GTCTC	1 cut(s)	56
BfaI	CTAG	3 cut(s)	518, 785, 914
BfmI	CTRYAG	1 cut(s)	831
BfoI	RGCGCY	1 cut(s)	94
BisI	GCNGC	7 cut(s)	6, 82, 174, 471, 474, 534, 831
BlpI	GCTNAGC	1 cut(s)	555
BlsI	GCNGC	7 cut(s)	7, 83, 175, 472, 475, 535, 832
Bme1390I	CCNGG	3 cut(s)	157, 644, 992
Bme18I	GGWCC	3 cut(s)	132, 159, 1048
BmgBI	CACGTC	1 cut(s)	1018
BmgT120I	GGNCC	3 cut(s)	132, 159, 1048
BmiI	GGNNCC	3 cut(s)	92, 134, 1049
BmrFI	CCNGG	3 cut(s)	157, 644, 992
BmsI	GCATC	5 cut(s)	541, 553, 770, 993, 1030
BmtI	GCTAGC	1 cut(s)	917
BpiI	GAAGAC	1 cut(s)	668
BplI	GAGNNNNNCTC	2 cut(s)	1085, 1117
Bpu1102I	GCTNAGC	1 cut(s)	555
BpuEI	CTTGAG	2 cut(s)	719, 893
BpuMI	CCSGG	1 cut(s)	157
BsaAI	YACGTR	1 cut(s)	1118
BsaHI	GRCGYC	1 cut(s)	91
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	4 cut(s)	455, 642, 643, 1195
BsaXI	ACNNNNNCTCC	2 cut(s)	185, 215
Bsc4I	CCNNNNNNNGG	4 cut(s)	490, 493, 1063, 1186
Bse1I	ACTGG	2 cut(s)	126, 597
Bse3DI	GCAATG	1 cut(s)	618
BseBI	CCWGG	2 cut(s)	644, 992
BseDI	CCNNGG	4 cut(s)	455, 642, 643, 1195
BseGI	GGATG	5 cut(s)	33, 376, 544, 984, 1089
BseLI	CCNNNNNNNGG	4 cut(s)	490, 493, 1063, 1186
BseMI	GCAATG	1 cut(s)	618
BseMII	CTCAG	6 cut(s)	258, 324, 588, 683, 1083, 1194
BseNI	ACTGG	2 cut(s)	126, 597
BseXI	GCAGC	5 cut(s)	68, 460, 482, 545, 817
BseYI	CCCAGC	1 cut(s)	37
BshFI	GGCC	2 cut(s)	1067, 1194
BshNI	GGYRCC	1 cut(s)	90
BsiHKAI	GWGCWC	1 cut(s)	670
BsiSI	CCGG	1 cut(s)	157
BslFI	GGGAC	2 cut(s)	625, 1061
BslI	CCNNNNNNNGG	4 cut(s)	490, 493, 1063, 1186
BsmAI	GTCTC	1 cut(s)	56
BsmFI	GGGAC	2 cut(s)	625, 1061
BsmI	GAATGC	3 cut(s)	343, 1117, 1168
BsnI	GGCC	2 cut(s)	1067, 1194
Bso31I	GGTCTC	1 cut(s)	56
Bsp1286I	GDGCHC	2 cut(s)	670, 1180
Bsp143I	GATC	3 cut(s)	259, 358, 775
Bsp1720I	GCTNAGC	1 cut(s)	555
Bsp19I	CCATGG	1 cut(s)	1195
BspACI	CCGC	5 cut(s)	153, 174, 204, 290, 988
BspANI	GGCC	2 cut(s)	1067, 1194
BspCNI	CTCAG	6 cut(s)	259, 325, 589, 682, 1084, 1195
BspHI	TCATGA	1 cut(s)	568
BspLI	GGNNCC	3 cut(s)	92, 134, 1049
BspMAI	CTGCAG	1 cut(s)	835
BspOI	GCTAGC	1 cut(s)	917
BspPI	GGATC	1 cut(s)	366
BspQI	GCTCTTC	2 cut(s)	450, 924
BspT107I	GGYRCC	1 cut(s)	90
BspTNI	GGTCTC	1 cut(s)	56
BsrBI	CCGCTC	1 cut(s)	206
BsrDI	GCAATG	1 cut(s)	618
BsrI	ACTGG	2 cut(s)	126, 597
BssECI	CCNNGG	4 cut(s)	455, 642, 643, 1195
BssMI	GATC	3 cut(s)	259, 358, 775
BssNI	GRCGYC	1 cut(s)	91
BssSI	CACGAG	1 cut(s)	663
BssT1I	CCWWGG	2 cut(s)	455, 1195
Bst2BI	CACGAG	1 cut(s)	663
Bst2UI	CCWGG	2 cut(s)	644, 992
Bst4CI	ACNGT	2 cut(s)	190, 885
Bst6I	CTCTTC	3 cut(s)	315, 450, 924
BstACI	GRCGYC	1 cut(s)	91
BstBAI	YACGTR	1 cut(s)	1118
BstC8I	GCNNGC	3 cut(s)	468, 915, 1192
BstDEI	CTNAG	9 cut(s)	267, 333, 555, 597, 669, 680, 720, 1092, 1203
BstDSI	CCRYGG	1 cut(s)	1195
BstENI	CCTNNNNNAGG	2 cut(s)	488, 491
BstF5I	GGATG	5 cut(s)	33, 376, 544, 984, 1089
BstH2I	RGCGCY	1 cut(s)	94
BstHHI	GCGC	1 cut(s)	93
BstKTI	GATC	3 cut(s)	262, 361, 778
BstMAI	GTCTC	1 cut(s)	56
BstMBI	GATC	3 cut(s)	259, 358, 775
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 90, 467, 602, 853, 900
BstNI	CCWGG	2 cut(s)	644, 992
BstSCI	CCNGG	3 cut(s)	155, 642, 990
BstSFI	CTRYAG	1 cut(s)	831
BstV1I	GCAGC	5 cut(s)	68, 460, 482, 545, 817
BstV2I	GAAGAC	1 cut(s)	668
BstX2I	RGATCY	1 cut(s)	358
BstXI	CCANNNNNNTGG	1 cut(s)	248
BstYI	RGATCY	1 cut(s)	358
BsuRI	GGCC	2 cut(s)	1067, 1194
BtgI	CCRYGG	1 cut(s)	1195
BtgZI	GCGATG	1 cut(s)	1007
BtrI	CACGTC	1 cut(s)	1018
BtsCI	GGATG	5 cut(s)	33, 376, 544, 984, 1089
BtsIMutI	CAGTG	1 cut(s)	590
Cac8I	GCNNGC	3 cut(s)	468, 915, 1192
CciI	TCATGA	1 cut(s)	568
CfoI	GCGC	1 cut(s)	93
Cfr13I	GGNCC	3 cut(s)	132, 159, 1048
Csp6I	GTAC	1 cut(s)	1087
CspCI	CAANNNNNGTGG	2 cut(s)	199, 234
CviAII	CATG	3 cut(s)	462, 569, 1196
CviQI	GTAC	1 cut(s)	1087
DdeI	CTNAG	9 cut(s)	267, 333, 555, 597, 669, 680, 720, 1092, 1203
DinI	GGCGCC	1 cut(s)	92
DpnI	GATC	3 cut(s)	261, 360, 777
DpnII	GATC	3 cut(s)	259, 358, 775
EaeI	YGGCCR	2 cut(s)	1065, 1192
Eam1104I	CTCTTC	3 cut(s)	315, 450, 924
EarI	CTCTTC	3 cut(s)	315, 450, 924
EciI	GGCGGA	1 cut(s)	977
Eco130I	CCWWGG	2 cut(s)	455, 1195
Eco24I	GRGCYC	1 cut(s)	1180
Eco31I	GGTCTC	1 cut(s)	56
Eco47I	GGWCC	3 cut(s)	132, 159, 1048
Eco57I	CTGAAG	3 cut(s)	333, 473, 869
Eco72I	CACGTG	1 cut(s)	1118
EcoNI	CCTNNNNNAGG	2 cut(s)	488, 491
EcoO109I	RGGNCCY	1 cut(s)	132
EcoRI	GAATTC	1 cut(s)	307
EcoRII	CCWGG	2 cut(s)	642, 990
EcoT14I	CCWWGG	2 cut(s)	455, 1195
EcoT38I	GRGCYC	1 cut(s)	1180
EgeI	GGCGCC	1 cut(s)	92
EheI	GGCGCC	1 cut(s)	92
ErhI	CCWWGG	2 cut(s)	455, 1195
FaeI	CATG	3 cut(s)	465, 572, 1199
FalI	AAGNNNNNCTT	2 cut(s)	495, 527
FaqI	GGGAC	2 cut(s)	625, 1061
FatI	CATG	3 cut(s)	461, 568, 1195
FbaI	TGATCA	1 cut(s)	259
Fnu4HI	GCNGC	7 cut(s)	6, 82, 174, 471, 474, 534, 831
FokI	GGATG	5 cut(s)	20, 383, 531, 971, 1096
FriOI	GRGCYC	1 cut(s)	1180
Fsp4HI	GCNGC	7 cut(s)	6, 82, 174, 471, 474, 534, 831
FspBI	CTAG	3 cut(s)	518, 785, 914
GlaI	GCGC	1 cut(s)	92
GluI	GCNGC	7 cut(s)	6, 82, 174, 471, 474, 534, 831
GsaI	CCCAGC	1 cut(s)	41
HaeII	RGCGCY	1 cut(s)	94
HaeIII	GGCC	2 cut(s)	1067, 1194
HapII	CCGG	1 cut(s)	157
HhaI	GCGC	1 cut(s)	93
Hin1I	GRCGYC	1 cut(s)	91
Hin1II	CATG	3 cut(s)	465, 572, 1199
Hin6I	GCGC	1 cut(s)	91
HinP1I	GCGC	1 cut(s)	91
HindIII	AAGCTT	2 cut(s)	383, 854
HinfI	GANTC	6 cut(s)	30, 114, 165, 673, 995, 1100
HpaII	CCGG	1 cut(s)	157
HphI	GGTGA	4 cut(s)	90, 142, 178, 223
Hpy166II	GTNNAC	1 cut(s)	193
Hpy188I	TCNGA	8 cut(s)	29, 313, 672, 756, 766, 780, 1006, 1093
Hpy8I	GTNNAC	1 cut(s)	193
HpyAV	CCTTC	2 cut(s)	105, 497
HpyCH4III	ACNGT	2 cut(s)	190, 885
HpyCH4IV	ACGT	3 cut(s)	1017, 1117, 1184
HpyCH4V	TGCA	9 cut(s)	605, 611, 761, 833, 894, 984, 1021, 1115, 1166
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 90, 467, 602, 853, 900
HpyF3I	CTNAG	9 cut(s)	267, 333, 555, 597, 669, 680, 720, 1092, 1203
HpySE526I	ACGT	3 cut(s)	1017, 1117, 1184
Hsp92I	GRCGYC	1 cut(s)	91
Hsp92II	CATG	3 cut(s)	465, 572, 1199
HspAI	GCGC	1 cut(s)	91
KasI	GGCGCC	1 cut(s)	90
Ksp22I	TGATCA	1 cut(s)	259
Kzo9I	GATC	3 cut(s)	259, 358, 775
LguI	GCTCTTC	2 cut(s)	450, 924
LmnI	GCTCC	1 cut(s)	211
Lsp1109I	GCAGC	5 cut(s)	68, 460, 482, 545, 817
LweI	GCATC	5 cut(s)	541, 553, 770, 993, 1030
MaeI	CTAG	3 cut(s)	518, 785, 914
MaeII	ACGT	3 cut(s)	1017, 1117, 1184
MaeIII	GTNAC	2 cut(s)	229, 236
MalI	GATC	3 cut(s)	261, 360, 777
MbiI	CCGCTC	1 cut(s)	206
MboI	GATC	3 cut(s)	259, 358, 775
MboII	GAAGA	7 cut(s)	316, 332, 437, 668, 800, 862, 911
MflI	RGATCY	1 cut(s)	358
MhlI	GDGCHC	2 cut(s)	670, 1180
MlsI	TGGCCA	2 cut(s)	1067, 1194
MluCI	AATT	2 cut(s)	307, 875
MluNI	TGGCCA	2 cut(s)	1067, 1194
Mly113I	GGCGCC	1 cut(s)	91
MlyI	GAGTC	3 cut(s)	159, 682, 1094
MmeI	TCCRAC	1 cut(s)	1077
Mox20I	TGGCCA	2 cut(s)	1067, 1194
MscI	TGGCCA	2 cut(s)	1067, 1194
MseI	TTAA	6 cut(s)	285, 345, 365, 540, 878, 971
MslI	CAYNNNNRTG	1 cut(s)	549
Msp20I	TGGCCA	2 cut(s)	1067, 1194
MspA1I	CMGCKG	1 cut(s)	473
MspI	CCGG	1 cut(s)	157
MspR9I	CCNGG	3 cut(s)	157, 644, 992
Mva1269I	GAATGC	3 cut(s)	343, 1117, 1168
MvaI	CCWGG	2 cut(s)	644, 992
MwoI	GCNNNNNNNGC	6 cut(s)	11, 90, 467, 602, 853, 900
NarI	GGCGCC	1 cut(s)	91
NciI	CCSGG	1 cut(s)	157
NcoI	CCATGG	1 cut(s)	1195
NdeII	GATC	3 cut(s)	259, 358, 775
NheI	GCTAGC	1 cut(s)	913
NlaIII	CATG	3 cut(s)	465, 572, 1199
NlaIV	GGNNCC	3 cut(s)	92, 134, 1049
NmeAIII	GCCGAG	2 cut(s)	83, 331
NmuCI	GTSAC	1 cut(s)	229
PagI	TCATGA	1 cut(s)	568
PasI	CCCWGGG	1 cut(s)	643
PciSI	GCTCTTC	2 cut(s)	450, 924
PctI	GAATGC	3 cut(s)	343, 1117, 1168
PfeI	GAWTC	3 cut(s)	30, 114, 995
PkrI	GCNGC	7 cut(s)	7, 83, 175, 472, 475, 535, 832
PleI	GAGTC	3 cut(s)	159, 681, 1094
PluTI	GGCGCC	1 cut(s)	94
PmaCI	CACGTG	1 cut(s)	1118
PmlI	CACGTG	1 cut(s)	1118
PpsI	GAGTC	3 cut(s)	159, 681, 1094
Ppu21I	YACGTR	1 cut(s)	1118
PpuMI	RGGWCCY	1 cut(s)	132
PshBI	ATTAAT	1 cut(s)	878
Psp5II	RGGWCCY	1 cut(s)	132
Psp6I	CCWGG	2 cut(s)	642, 990
PspCI	CACGTG	1 cut(s)	1118
PspFI	CCCAGC	1 cut(s)	37
PspGI	CCWGG	2 cut(s)	642, 990
PspN4I	GGNNCC	3 cut(s)	92, 134, 1049
PspPI	GGNCC	3 cut(s)	132, 159, 1048
PspPPI	RGGWCCY	1 cut(s)	132
PstI	CTGCAG	1 cut(s)	835
PsuI	RGATCY	1 cut(s)	358
PvuII	CAGCTG	1 cut(s)	473
RsaI	GTAC	1 cut(s)	1088
RsaNI	GTAC	1 cut(s)	1087
RseI	CAYNNNNRTG	1 cut(s)	549
SapI	GCTCTTC	2 cut(s)	450, 924
SaqAI	TTAA	6 cut(s)	285, 345, 365, 540, 878, 971
SatI	GCNGC	7 cut(s)	6, 82, 174, 471, 474, 534, 831
Sau3AI	GATC	3 cut(s)	259, 358, 775
Sau96I	GGNCC	3 cut(s)	132, 159, 1048
SchI	GAGTC	3 cut(s)	159, 682, 1094
ScrFI	CCNGG	3 cut(s)	157, 644, 992
SduI	GDGCHC	2 cut(s)	670, 1180
SfaNI	GCATC	5 cut(s)	541, 553, 770, 993, 1030
SfcI	CTRYAG	1 cut(s)	831
SfoI	GGCGCC	1 cut(s)	92
SinI	GGWCC	3 cut(s)	132, 159, 1048
SmiMI	CAYNNNNRTG	1 cut(s)	549
SmlI	CTYRAG	2 cut(s)	698, 908
SmoI	CTYRAG	2 cut(s)	698, 908
Sse9I	AATT	2 cut(s)	307, 875
SsiI	CCGC	5 cut(s)	153, 174, 204, 290, 988
SspDI	GGCGCC	1 cut(s)	90
SspMI	CTAG	3 cut(s)	518, 785, 914
StyD4I	CCNGG	3 cut(s)	155, 642, 990
StyI	CCWWGG	2 cut(s)	455, 1195
TaaI	ACNGT	2 cut(s)	190, 885
TaiI	ACGT	3 cut(s)	1020, 1120, 1187
TaqI	TCGA	2 cut(s)	1107, 1128
TasI	AATT	2 cut(s)	307, 875
TatI	WGTACW	1 cut(s)	1086
TauI	GCSGC	1 cut(s)	176
TfiI	GAWTC	3 cut(s)	30, 114, 995
Tru1I	TTAA	6 cut(s)	285, 345, 365, 540, 878, 971
Tru9I	TTAA	6 cut(s)	285, 345, 365, 540, 878, 971
TscAI	CASTG	1 cut(s)	597
TseFI	GTSAC	1 cut(s)	229
TseI	GCWGC	6 cut(s)	5, 81, 470, 473, 533, 830
Tsp45I	GTSAC	1 cut(s)	229
TspDTI	ATGAA	2 cut(s)	435, 557
TspGWI	ACGGA	1 cut(s)	109
TspRI	CASTG	1 cut(s)	597
VpaK11BI	GGWCC	3 cut(s)	132, 159, 1048
VspI	ATTAAT	1 cut(s)	878
XagI	CCTNNNNNAGG	2 cut(s)	488, 491
XapI	RAATTY	1 cut(s)	307
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1034
XspI	CTAG	3 cut(s)	518, 785, 914

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.