Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30890 AT4G30890 AT4G30890 |
| fragaria_vesca | FvH4_7g02050 FvH4_7g02050 FvH4_7g02050 |
| malus_domestica | MD02G1296600.v1.1 MD02G1296700.v1.1 MD07G1027400.v1.1 |
| prunus_persica | Prupe.2G027700_v2.0.a1 Prupe.3G154500_v2.0.a1 Prupe.6G151000_v2.0.a1 |
| pyrus_communis | pycom02g24980 pycom02g24990 pycom07g02100 |
| rosa_chinensis | RchiOBHm_Chr1g0319451 |
| rosa_laevigata | RLG00000030484 |
| rosa_multiflora | Rmu_sc0005870.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00328480 |
| rosa_rugosa | Rorug01G0027800 |
| rosa_samantha | Rh1AG039900 Rh1BG036700 Rh1CG039100 Rh1DG030800 |
| rosa_wichuraiana | Rw1G003190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 327 |
| AclWI | GGATC | 1 cut(s) | 912 |
| AcsI | RAATTY | 5 cut(s) | 130, 187, 431, 722, 822 |
| AcuI | CTGAAG | 3 cut(s) | 60, 1044, 1194 |
| AfaI | GTAC | 3 cut(s) | 316, 840, 1186 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 680, 695, 1493, 1494 |
| AflII | CTTAAG | 1 cut(s) | 926 |
| AgsI | TTSAA | 7 cut(s) | 438, 526, 744, 750, 809, 935, 1139 |
| AjnI | CCWGG | 4 cut(s) | 50, 76, 1037, 1593 |
| AluBI | AGCT | 9 cut(s) | 16, 389, 491, 643, 894, 931, 1124, 1178, 1253 |
| AluI | AGCT | 9 cut(s) | 16, 389, 491, 643, 894, 931, 1124, 1178, 1253 |
| Alw26I | GTCTC | 5 cut(s) | 41, 425, 721, 770, 998 |
| AlwI | GGATC | 1 cut(s) | 912 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 646, 1253 |
| Ama87I | CYCGRG | 2 cut(s) | 853, 946 |
| AoxI | GGCC | 4 cut(s) | 530, 785, 860, 1012 |
| ApeKI | GCWGC | 3 cut(s) | 61, 263, 1250 |
| ApoI | RAATTY | 5 cut(s) | 130, 187, 431, 722, 822 |
| AseI | ATTAAT | 2 cut(s) | 573, 954 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 813, 1179 |
| AspLEI | GCGC | 1 cut(s) | 963 |
| AspS9I | GGNCC | 2 cut(s) | 530, 1013 |
| AsuHPI | GGTGA | 5 cut(s) | 66, 167, 179, 1114, 1148 |
| AsuII | TTCGAA | 1 cut(s) | 1307 |
| AvaI | CYCGRG | 2 cut(s) | 853, 946 |
| AxyI | CCTNAGG | 1 cut(s) | 675 |
| BanII | GRGCYC | 2 cut(s) | 204, 1488 |
| BauI | CACGAG | 1 cut(s) | 561 |
| BbsI | GAAGAC | 1 cut(s) | 48 |
| BbvI | GCAGC | 3 cut(s) | 48, 275, 1262 |
| BciT130I | CCWGG | 4 cut(s) | 52, 78, 1039, 1595 |
| BcoDI | GTCTC | 5 cut(s) | 41, 425, 721, 770, 998 |
| BfaI | CTAG | 4 cut(s) | 735, 846, 974, 1278 |
| BfmI | CTRYAG | 7 cut(s) | 300, 512, 546, 608, 647, 984, 1029 |
| BfrI | CTTAAG | 1 cut(s) | 926 |
| BisI | GCNGC | 3 cut(s) | 62, 264, 1251 |
| BlpI | GCTNAGC | 1 cut(s) | 203 |
| BlsI | GCNGC | 3 cut(s) | 63, 265, 1252 |
| Bme1390I | CCNGG | 4 cut(s) | 52, 78, 1039, 1595 |
| BmeT110I | CYCGRG | 2 cut(s) | 853, 946 |
| BmgT120I | GGNCC | 2 cut(s) | 530, 1013 |
| BmiI | GGNNCC | 1 cut(s) | 1573 |
| BmrFI | CCNGG | 4 cut(s) | 52, 78, 1039, 1595 |
| BpiI | GAAGAC | 1 cut(s) | 48 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 701, 733 |
| BpmI | CTGGAG | 1 cut(s) | 816 |
| Bpu10I | CCTNAGC | 2 cut(s) | 879, 890 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 203 |
| Bpu14I | TTCGAA | 1 cut(s) | 1307 |
| BpuEI | CTTGAG | 4 cut(s) | 794, 1187, 1250, 1412 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1316 |
| BsaI | GGTCTC | 2 cut(s) | 41, 425 |
| BsaJI | CCNNGG | 2 cut(s) | 77, 1351 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 680, 695, 1493, 1494 |
| Bse118I | RCCGGY | 1 cut(s) | 1574 |
| Bse1I | ACTGG | 1 cut(s) | 784 |
| Bse21I | CCTNAGG | 1 cut(s) | 675 |
| Bse3DI | GCAATG | 1 cut(s) | 56 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1316 |
| BseBI | CCWGG | 4 cut(s) | 52, 78, 1039, 1595 |
| BseDI | CCNNGG | 2 cut(s) | 77, 1351 |
| BseGI | GGATG | 2 cut(s) | 317, 1201 |
| BseJI | GATNNNNATC | 1 cut(s) | 1316 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 680, 695, 1493, 1494 |
| BseMI | GCAATG | 1 cut(s) | 56 |
| BseMII | CTCAG | 3 cut(s) | 217, 893, 1425 |
| BseNI | ACTGG | 1 cut(s) | 784 |
| BseXI | GCAGC | 3 cut(s) | 48, 275, 1262 |
| BseYI | CCCAGC | 1 cut(s) | 1253 |
| BsgI | GTGCAG | 1 cut(s) | 1200 |
| BshFI | GGCC | 4 cut(s) | 532, 787, 862, 1014 |
| BsiHKCI | CYCGRG | 2 cut(s) | 853, 946 |
| BsiSI | CCGG | 1 cut(s) | 1575 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 680, 695, 1493, 1494 |
| BsmAI | GTCTC | 5 cut(s) | 41, 425, 721, 770, 998 |
| BsmBI | CGTCTC | 2 cut(s) | 721, 998 |
| BsnI | GGCC | 4 cut(s) | 532, 787, 862, 1014 |
| Bso31I | GGTCTC | 2 cut(s) | 41, 425 |
| BsoBI | CYCGRG | 2 cut(s) | 853, 946 |
| Bsp119I | TTCGAA | 1 cut(s) | 1307 |
| Bsp1286I | GDGCHC | 2 cut(s) | 204, 1488 |
| Bsp143I | GATC | 2 cut(s) | 904, 1317 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 203 |
| BspANI | GGCC | 4 cut(s) | 532, 787, 862, 1014 |
| BspCNI | CTCAG | 3 cut(s) | 216, 892, 1426 |
| BspLI | GGNNCC | 1 cut(s) | 1573 |
| BspMAI | CTGCAG | 3 cut(s) | 651, 988, 1033 |
| BspPI | GGATC | 1 cut(s) | 912 |
| BspQI | GCTCTTC | 1 cut(s) | 621 |
| BspT104I | TTCGAA | 1 cut(s) | 1307 |
| BspTI | CTTAAG | 1 cut(s) | 926 |
| BspTNI | GGTCTC | 2 cut(s) | 41, 425 |
| BsrDI | GCAATG | 1 cut(s) | 56 |
| BsrFI | RCCGGY | 1 cut(s) | 1574 |
| BsrI | ACTGG | 1 cut(s) | 784 |
| BssAI | RCCGGY | 1 cut(s) | 1574 |
| BssECI | CCNNGG | 2 cut(s) | 77, 1351 |
| BssMI | GATC | 2 cut(s) | 904, 1317 |
| BssSI | CACGAG | 1 cut(s) | 561 |
| BssT1I | CCWWGG | 1 cut(s) | 1351 |
| Bst2BI | CACGAG | 1 cut(s) | 561 |
| Bst2UI | CCWGG | 4 cut(s) | 52, 78, 1039, 1595 |
| Bst4CI | ACNGT | 4 cut(s) | 541, 550, 1009, 1135 |
| Bst6I | CTCTTC | 1 cut(s) | 621 |
| BstAFI | CTTAAG | 1 cut(s) | 926 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1330 |
| BstBI | TTCGAA | 1 cut(s) | 1307 |
| BstC8I | GCNNGC | 1 cut(s) | 860 |
| BstDEI | CTNAG | 9 cut(s) | 12, 203, 495, 675, 879, 890, 1017, 1362, 1434 |
| BstF5I | GGATG | 2 cut(s) | 317, 1201 |
| BstHHI | GCGC | 1 cut(s) | 963 |
| BstKTI | GATC | 2 cut(s) | 907, 1320 |
| BstMAI | GTCTC | 5 cut(s) | 41, 425, 721, 770, 998 |
| BstMBI | GATC | 2 cut(s) | 904, 1317 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 260, 855, 1259, 1330, 1356 |
| BstNI | CCWGG | 4 cut(s) | 52, 78, 1039, 1595 |
| BstNSI | RCATGY | 1 cut(s) | 733 |
| BstSCI | CCNGG | 4 cut(s) | 50, 76, 1037, 1593 |
| BstSFI | CTRYAG | 7 cut(s) | 300, 512, 546, 608, 647, 984, 1029 |
| BstV1I | GCAGC | 3 cut(s) | 48, 275, 1262 |
| BstV2I | GAAGAC | 1 cut(s) | 48 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 350 |
| Bsu36I | CCTNAGG | 1 cut(s) | 675 |
| BsuRI | GGCC | 4 cut(s) | 532, 787, 862, 1014 |
| BtsCI | GGATG | 2 cut(s) | 317, 1201 |
| BtsI | GCAGTG | 1 cut(s) | 1560 |
| BtsIMutI | CAGTG | 2 cut(s) | 1538, 1560 |
| Cac8I | GCNNGC | 1 cut(s) | 860 |
| CaiI | CAGNNNCTG | 2 cut(s) | 646, 1253 |
| CfoI | GCGC | 1 cut(s) | 963 |
| Cfr10I | RCCGGY | 1 cut(s) | 1574 |
| Cfr13I | GGNCC | 2 cut(s) | 530, 1013 |
| CsiI | ACCWGGT | 1 cut(s) | 50 |
| Csp6I | GTAC | 3 cut(s) | 315, 839, 1185 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1377, 1412 |
| CviAII | CATG | 4 cut(s) | 730, 802, 914, 1589 |
| CviQI | GTAC | 3 cut(s) | 315, 839, 1185 |
| DdeI | CTNAG | 9 cut(s) | 12, 203, 495, 675, 879, 890, 1017, 1362, 1434 |
| DpnI | GATC | 2 cut(s) | 906, 1319 |
| DpnII | GATC | 2 cut(s) | 904, 1317 |
| Eam1104I | CTCTTC | 1 cut(s) | 621 |
| EarI | CTCTTC | 1 cut(s) | 621 |
| Eco130I | CCWWGG | 1 cut(s) | 1351 |
| Eco147I | AGGCCT | 1 cut(s) | 787 |
| Eco24I | GRGCYC | 2 cut(s) | 204, 1488 |
| Eco31I | GGTCTC | 2 cut(s) | 41, 425 |
| Eco57I | CTGAAG | 3 cut(s) | 60, 1044, 1194 |
| Eco81I | CCTNAGG | 1 cut(s) | 675 |
| Eco88I | CYCGRG | 2 cut(s) | 853, 946 |
| EcoRII | CCWGG | 4 cut(s) | 50, 76, 1037, 1593 |
| EcoT14I | CCWWGG | 1 cut(s) | 1351 |
| EcoT22I | ATGCAT | 2 cut(s) | 915, 1555 |
| EcoT38I | GRGCYC | 2 cut(s) | 204, 1488 |
| ErhI | CCWWGG | 1 cut(s) | 1351 |
| Esp3I | CGTCTC | 2 cut(s) | 721, 998 |
| FaeI | CATG | 4 cut(s) | 733, 805, 917, 1592 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 801, 833 |
| FatI | CATG | 4 cut(s) | 729, 801, 913, 1588 |
| FauNDI | CATATG | 1 cut(s) | 1600 |
| Fnu4HI | GCNGC | 3 cut(s) | 62, 264, 1251 |
| FokI | GGATG | 2 cut(s) | 324, 1208 |
| FriOI | GRGCYC | 2 cut(s) | 204, 1488 |
| Fsp4HI | GCNGC | 3 cut(s) | 62, 264, 1251 |
| FspBI | CTAG | 4 cut(s) | 735, 846, 974, 1278 |
| GlaI | GCGC | 1 cut(s) | 962 |
| GluI | GCNGC | 3 cut(s) | 62, 264, 1251 |
| GsaI | CCCAGC | 1 cut(s) | 1257 |
| GsuI | CTGGAG | 1 cut(s) | 816 |
| HaeIII | GGCC | 4 cut(s) | 532, 787, 862, 1014 |
| HapII | CCGG | 1 cut(s) | 1575 |
| HhaI | GCGC | 1 cut(s) | 963 |
| Hin1II | CATG | 4 cut(s) | 733, 805, 917, 1592 |
| Hin6I | GCGC | 1 cut(s) | 961 |
| HinP1I | GCGC | 1 cut(s) | 961 |
| HindIII | AAGCTT | 2 cut(s) | 929, 1122 |
| HinfI | GANTC | 3 cut(s) | 8, 170, 583 |
| HpaII | CCGG | 1 cut(s) | 1575 |
| HphI | GGTGA | 5 cut(s) | 66, 167, 179, 1114, 1148 |
| Hpy166II | GTNNAC | 2 cut(s) | 227, 278 |
| Hpy188I | TCNGA | 5 cut(s) | 40, 721, 909, 1063, 1571 |
| Hpy188III | TCNNGA | 6 cut(s) | 443, 773, 833, 881, 1229, 1409 |
| Hpy8I | GTNNAC | 2 cut(s) | 227, 278 |
| HpyAV | CCTTC | 7 cut(s) | 76, 407, 803, 929, 1068, 1099, 1252 |
| HpyCH4III | ACNGT | 4 cut(s) | 541, 550, 1009, 1135 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 260, 855, 1259, 1330, 1356 |
| HpyF3I | CTNAG | 9 cut(s) | 12, 203, 495, 675, 879, 890, 1017, 1362, 1434 |
| Hsp92II | CATG | 4 cut(s) | 733, 805, 917, 1592 |
| HspAI | GCGC | 1 cut(s) | 961 |
| Kzo9I | GATC | 2 cut(s) | 904, 1317 |
| LguI | GCTCTTC | 1 cut(s) | 621 |
| Lsp1109I | GCAGC | 3 cut(s) | 48, 275, 1262 |
| MabI | ACCWGGT | 1 cut(s) | 50 |
| MaeI | CTAG | 4 cut(s) | 735, 846, 974, 1278 |
| MaeIII | GTNAC | 4 cut(s) | 136, 535, 1033, 1558 |
| MalI | GATC | 2 cut(s) | 906, 1319 |
| MboI | GATC | 2 cut(s) | 904, 1317 |
| MboII | GAAGA | 8 cut(s) | 53, 141, 608, 884, 972, 1001, 1004, 1321 |
| MfeI | CAATTG | 2 cut(s) | 1088, 1619 |
| MhlI | GDGCHC | 2 cut(s) | 204, 1488 |
| MmeI | TCCRAC | 2 cut(s) | 713, 1451 |
| Mph1103I | ATGCAT | 2 cut(s) | 915, 1555 |
| MroXI | GAANNNNTTC | 2 cut(s) | 813, 1179 |
| MseI | TTAA | 9 cut(s) | 221, 231, 290, 569, 573, 819, 927, 954, 1067 |
| MslI | CAYNNNNRTG | 1 cut(s) | 348 |
| MspA1I | CMGCKG | 1 cut(s) | 1253 |
| MspCI | CTTAAG | 1 cut(s) | 926 |
| MspI | CCGG | 1 cut(s) | 1575 |
| MspR9I | CCNGG | 4 cut(s) | 52, 78, 1039, 1595 |
| MunI | CAATTG | 2 cut(s) | 1088, 1619 |
| MvaI | CCWGG | 4 cut(s) | 52, 78, 1039, 1595 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 260, 855, 1259, 1330, 1356 |
| NdeI | CATATG | 1 cut(s) | 1600 |
| NdeII | GATC | 2 cut(s) | 904, 1317 |
| NlaIII | CATG | 4 cut(s) | 733, 805, 917, 1592 |
| NlaIV | GGNNCC | 1 cut(s) | 1573 |
| NmuCI | GTSAC | 1 cut(s) | 1558 |
| NsiI | ATGCAT | 2 cut(s) | 915, 1555 |
| NspI | RCATGY | 1 cut(s) | 733 |
| NspV | TTCGAA | 1 cut(s) | 1307 |
| PacI | TTAATTAA | 1 cut(s) | 573 |
| PaeR7I | CTCGAG | 1 cut(s) | 946 |
| PceI | AGGCCT | 1 cut(s) | 787 |
| PciSI | GCTCTTC | 1 cut(s) | 621 |
| PdmI | GAANNNNTTC | 2 cut(s) | 813, 1179 |
| PfeI | GAWTC | 3 cut(s) | 8, 170, 583 |
| PflFI | GACNNNGTC | 1 cut(s) | 52 |
| PkrI | GCNGC | 3 cut(s) | 63, 265, 1252 |
| PshBI | ATTAAT | 2 cut(s) | 573, 954 |
| PsiI | TTATAA | 1 cut(s) | 327 |
| Psp6I | CCWGG | 4 cut(s) | 50, 76, 1037, 1593 |
| PspFI | CCCAGC | 1 cut(s) | 1253 |
| PspGI | CCWGG | 4 cut(s) | 50, 76, 1037, 1593 |
| PspN4I | GGNNCC | 1 cut(s) | 1573 |
| PspPI | GGNCC | 2 cut(s) | 530, 1013 |
| PspXI | VCTCGAGB | 1 cut(s) | 946 |
| PstI | CTGCAG | 3 cut(s) | 651, 988, 1033 |
| PstNI | CAGNNNCTG | 2 cut(s) | 646, 1253 |
| PsyI | GACNNNGTC | 1 cut(s) | 52 |
| PvuII | CAGCTG | 1 cut(s) | 1253 |
| RsaI | GTAC | 3 cut(s) | 316, 840, 1186 |
| RsaNI | GTAC | 3 cut(s) | 315, 839, 1185 |
| RseI | CAYNNNNRTG | 1 cut(s) | 348 |
| SapI | GCTCTTC | 1 cut(s) | 621 |
| SaqAI | TTAA | 9 cut(s) | 221, 231, 290, 569, 573, 819, 927, 954, 1067 |
| SatI | GCNGC | 3 cut(s) | 62, 264, 1251 |
| Sau3AI | GATC | 2 cut(s) | 904, 1317 |
| Sau96I | GGNCC | 2 cut(s) | 530, 1013 |
| ScrFI | CCNGG | 4 cut(s) | 52, 78, 1039, 1595 |
| SduI | GDGCHC | 2 cut(s) | 204, 1488 |
| SexAI | ACCWGGT | 1 cut(s) | 50 |
| SfcI | CTRYAG | 7 cut(s) | 300, 512, 546, 608, 647, 984, 1029 |
| Sfr274I | CTCGAG | 1 cut(s) | 946 |
| SfuI | TTCGAA | 1 cut(s) | 1307 |
| SlaI | CTCGAG | 1 cut(s) | 946 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 348 |
| SmlI | CTYRAG | 6 cut(s) | 773, 926, 946, 1202, 1229, 1391 |
| SmoI | CTYRAG | 6 cut(s) | 773, 926, 946, 1202, 1229, 1391 |
| SseBI | AGGCCT | 1 cut(s) | 787 |
| SspI | AATATT | 1 cut(s) | 379 |
| SspMI | CTAG | 4 cut(s) | 735, 846, 974, 1278 |
| StuI | AGGCCT | 1 cut(s) | 787 |
| StyD4I | CCNGG | 4 cut(s) | 50, 76, 1037, 1593 |
| StyI | CCWWGG | 1 cut(s) | 1351 |
| TaaI | ACNGT | 4 cut(s) | 541, 550, 1009, 1135 |
| TaqI | TCGA | 5 cut(s) | 947, 1191, 1240, 1307, 1441 |
| TatI | WGTACW | 1 cut(s) | 314 |
| TfiI | GAWTC | 3 cut(s) | 8, 170, 583 |
| Tru1I | TTAA | 9 cut(s) | 221, 231, 290, 569, 573, 819, 927, 954, 1067 |
| Tru9I | TTAA | 9 cut(s) | 221, 231, 290, 569, 573, 819, 927, 954, 1067 |
| TscAI | CASTG | 2 cut(s) | 1538, 1567 |
| TseFI | GTSAC | 1 cut(s) | 1558 |
| TseI | GCWGC | 3 cut(s) | 61, 263, 1250 |
| Tsp45I | GTSAC | 1 cut(s) | 1558 |
| TspDTI | ATGAA | 5 cut(s) | 258, 381, 886, 933, 1011 |
| TspRI | CASTG | 2 cut(s) | 1538, 1567 |
| Tth111I | GACNNNGTC | 1 cut(s) | 52 |
| Vha464I | CTTAAG | 1 cut(s) | 926 |
| VspI | ATTAAT | 2 cut(s) | 573, 954 |
| XapI | RAATTY | 5 cut(s) | 130, 187, 431, 722, 822 |
| XceI | RCATGY | 1 cut(s) | 733 |
| XhoI | CTCGAG | 1 cut(s) | 946 |
| XmnI | GAANNNNTTC | 2 cut(s) | 813, 1179 |
| XspI | CTAG | 4 cut(s) | 735, 846, 974, 1278 |
| Zsp2I | ATGCAT | 2 cut(s) | 915, 1555 |