Prupe.2G138300_v2.0.a1

Phosphatidate

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
19535693 .. 19541165
5473 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G138300.2

Sequence Viewer

Length: 1230 bp
ATGGCAACGACGTCGTATTTCCAACTCCATCGGTGCAGTCCAATCTCACTCTCTCTTTCCTCTCGTTGCTCTTGTCCCTGCCGTCCCTCGCCCTCCAAAACCCTAGTTCTCACTCGTCACCGCGCAAAGTTGGGTCATCTGGATCTCTTGTTCGACGGAAATAGACGTGCGCTGGGGCTTGGCCGAAATGGAGCTTTGGCTAGCCGCCGGCTAATCGCAGTCGCGGCTCGAGCCGAGCCGGAACGGCTTAGCGAGGACAATGCCCACCAGGAAGTCCACAAAGGCCATAAATTGTCAATGAGTGAGGATGCGGTCTCAGAGCATCAACAGAAAGCCAGTCAGTTAAAGAAAAGAATTTTTTTTGGACTCGGAATTGGGTTATCCGTAGGCATTGTCGTGTTGGCTGGAGGATGGGTATTCACAGCAGCTGTGGCAGCTGCTGTCTTTGTTGGTGCACGCGAGTATTTTGAATTGGTTAGGAGTCATGGAATTACTGCAGGGATGACACCTCCACCTCGATATGTGTCACGAGTTTGCTCTGTTATTTGTGCTCTCATGCCCCTAGTTACCTTGTATCGTGGTCAAATTGATGTTTCCGTTACATCTGCTGCCTTTTTTGTTGCTATGGCATTGCTTTTACAGAGAGGAAATCCTCGCTTTGCACAGCTTAGTAGCACAATGTTTGGGCTATTTTACTGTGGATATCTTCCTTGTTTCTGGGTTAAGCTTCGATGTGGCCTAGCAGCACCAGCCCTAAACACTAGTTTTGGATCAGCATGGCCCATCCTTCTTGGTGGACAAGCTCACTGGACTGTTGGTCTTGTGGCAACCTTGATTTCTTTCAGTAGCATAATTGCTGCTGACACTTATGCTTTTCTGGGTGGCAAGGCATTTGGTAGGACACCCCTTACTACTGTTAGCCCAAAGAAGACATGGGAAGGAACTATTGTAGGGTTGGGCGGTTGTATAGCCACTTCTGTTGTATTATCAAGGATATTTTGCTGGCCCAAATCTTTATTAAGCGCGATAGCTTTTGGGTTTCTGAATTTTTTTGGCTCCGTATTTGGTGATCTTACGGAATCCATGATCAAACGTGATGCGGGTGTAAAGGACTCTGGGTCTCTAATACCAGGACATGGAGGAATACTAGATAGAGTGGACAGTTACATGTTCACGGGTGCACTTGCATACTCCTTTGTCAAAACCTTCTTGCCACTTTATGGAGTTTGA

Protein Analysis

410

Amino Acids

43.93

Weight (kDa)

9.72

Isoelectric Point (pI)

33.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 14
AccB7I CCANNNNNTGG 2 cut(s) 1136, 1220
AccII CGCG 4 cut(s) 123, 224, 459, 1025
AciI CCGC 6 cut(s) 121, 205, 224, 311, 960, 1100
AclWI GGATC 2 cut(s) 150, 778
AcoI YGGCCR 1 cut(s) 181
AcsI RAATTY 2 cut(s) 354, 1045
AcyI GRCGYC 1 cut(s) 11
AfiI CCNNNNNNNGG 2 cut(s) 1136, 1220
AflIII ACRYGT 1 cut(s) 1167
AgsI TTSAA 1 cut(s) 470
AhdI GACNNNNNGTC 2 cut(s) 816, 1117
AhlI ACTAGT 1 cut(s) 761
AjiI CACGTC 1 cut(s) 167
AjnI CCWGG 2 cut(s) 267, 1129
AloI GAACNNNNNNTCC 2 cut(s) 134, 166
AluBI AGCT 7 cut(s) 194, 428, 437, 667, 727, 803, 1031
AluI AGCT 7 cut(s) 194, 428, 437, 667, 727, 803, 1031
Alw21I GWGCWC 3 cut(s) 457, 553, 1183
Alw26I GTCTC 2 cut(s) 319, 1125
Alw44I GTGCAC 2 cut(s) 453, 1179
AlwI GGATC 2 cut(s) 150, 778
AlwNI CAGNNNCTG 2 cut(s) 428, 440
Ama87I CYCGRG 1 cut(s) 228
AoxI GGCC 5 cut(s) 181, 283, 736, 779, 1004
ApaLI GTGCAC 2 cut(s) 453, 1179
ApeKI GCWGC 6 cut(s) 425, 434, 437, 608, 743, 857
ApoI RAATTY 2 cut(s) 354, 1045
AspLEI GCGC 3 cut(s) 125, 172, 1025
AspS9I GGNCC 2 cut(s) 780, 1005
AsuHPI GGTGA 2 cut(s) 110, 1079
AsuNHI GCTAGC 1 cut(s) 200
AvaI CYCGRG 1 cut(s) 228
BaeGI GKGCMC 2 cut(s) 457, 1183
BarI GAAGNNNNNNTAC 2 cut(s) 958, 990
BauI CACGAG 1 cut(s) 528
BbsI GAAGAC 1 cut(s) 935
Bbv12I GWGCWC 3 cut(s) 457, 553, 1183
BbvI GCAGC 6 cut(s) 424, 437, 446, 595, 755, 844
BccI CCATC 3 cut(s) 36, 405, 791
BceAI ACGGC 2 cut(s) 66, 260
BcgI CGANNNNNNTGC 3 cut(s) 28, 242, 276
BciT130I CCWGG 2 cut(s) 269, 1131
BclI TGATCA 1 cut(s) 1086
BcoDI GTCTC 2 cut(s) 319, 1125
BcuI ACTAGT 1 cut(s) 761
BfaI CTAG 6 cut(s) 104, 201, 563, 740, 762, 1148
BfmI CTRYAG 1 cut(s) 495
BglI GCCNNNNNGGC 1 cut(s) 244
BisI GCNGC 8 cut(s) 205, 225, 426, 435, 438, 609, 744, 858
BlpI GCTNAGC 1 cut(s) 248
BlsI GCNGC 8 cut(s) 206, 226, 427, 436, 439, 610, 745, 859
Bme1390I CCNGG 2 cut(s) 269, 1131
BmeRI GACNNNNNGTC 2 cut(s) 816, 1117
BmeT110I CYCGRG 1 cut(s) 228
BmgBI CACGTC 1 cut(s) 167
BmgT120I GGNCC 2 cut(s) 780, 1005
BmiI GGNNCC 1 cut(s) 1057
BmrFI CCNGG 2 cut(s) 269, 1131
BmsI GCATC 3 cut(s) 298, 331, 1087
BmtI GCTAGC 1 cut(s) 204
BpiI GAAGAC 1 cut(s) 935
BpmI CTGGAG 1 cut(s) 426
Bpu1102I GCTNAGC 1 cut(s) 248
BsaHI GRCGYC 1 cut(s) 11
BsaI GGTCTC 2 cut(s) 319, 1125
BsaXI ACNNNNNCTCC 2 cut(s) 399, 429
Bsc4I CCNNNNNNNGG 2 cut(s) 1136, 1220
Bse118I RCCGGY 1 cut(s) 207
Bse1I ACTGG 2 cut(s) 336, 812
Bse3DI GCAATG 1 cut(s) 629
BseBI CCWGG 2 cut(s) 269, 1131
BseGI GGATG 4 cut(s) 313, 416, 507, 783
BseLI CCNNNNNNNGG 2 cut(s) 1136, 1220
BseMI GCAATG 1 cut(s) 629
BseMII CTCAG 1 cut(s) 330
BseNI ACTGG 2 cut(s) 336, 812
BseSI GKGCMC 2 cut(s) 457, 1183
BseXI GCAGC 6 cut(s) 424, 437, 446, 595, 755, 844
BseYI CCCAGC 1 cut(s) 172
BsgI GTGCAG 1 cut(s) 55
Bsh1236I CGCG 4 cut(s) 123, 224, 459, 1025
BshFI GGCC 5 cut(s) 183, 285, 738, 781, 1006
BsiHKAI GWGCWC 3 cut(s) 457, 553, 1183
BsiHKCI CYCGRG 1 cut(s) 228
BsiSI CCGG 2 cut(s) 208, 239
BslFI GGGAC 2 cut(s) 60, 69
BslI CCNNNNNNNGG 2 cut(s) 1136, 1220
BsmAI GTCTC 2 cut(s) 319, 1125
BsmFI GGGAC 2 cut(s) 60, 69
BsnI GGCC 5 cut(s) 183, 285, 738, 781, 1006
Bso31I GGTCTC 2 cut(s) 319, 1125
BsoBI CYCGRG 1 cut(s) 228
Bsp1286I GDGCHC 3 cut(s) 457, 553, 1183
Bsp143I GATC 4 cut(s) 142, 770, 1069, 1086
Bsp1720I GCTNAGC 1 cut(s) 248
BspACI CCGC 6 cut(s) 121, 205, 224, 311, 960, 1100
BspANI GGCC 5 cut(s) 183, 285, 738, 781, 1006
BspCNI CTCAG 1 cut(s) 329
BspFNI CGCG 4 cut(s) 123, 224, 459, 1025
BspLI GGNNCC 1 cut(s) 1057
BspMAI CTGCAG 1 cut(s) 499
BspOI GCTAGC 1 cut(s) 204
BspPI GGATC 2 cut(s) 150, 778
BspTNI GGTCTC 2 cut(s) 319, 1125
BsrDI GCAATG 1 cut(s) 629
BsrFI RCCGGY 1 cut(s) 207
BsrI ACTGG 2 cut(s) 336, 812
BssAI RCCGGY 1 cut(s) 207
BssMI GATC 4 cut(s) 142, 770, 1069, 1086
BssNI GRCGYC 1 cut(s) 11
BssSI CACGAG 1 cut(s) 528
Bst2BI CACGAG 1 cut(s) 528
Bst2UI CCWGG 2 cut(s) 269, 1131
Bst4CI ACNGT 4 cut(s) 698, 814, 916, 1163
BstACI GRCGYC 1 cut(s) 11
BstC8I GCNNGC 4 cut(s) 202, 209, 457, 1004
BstDEI CTNAG 3 cut(s) 248, 316, 668
BstF5I GGATG 4 cut(s) 313, 416, 507, 783
BstFNI CGCG 4 cut(s) 123, 224, 459, 1025
BstHHI GCGC 3 cut(s) 125, 172, 1025
BstKTI GATC 4 cut(s) 145, 773, 1072, 1089
BstMAI GTCTC 2 cut(s) 319, 1125
BstMBI GATC 4 cut(s) 142, 770, 1069, 1086
BstMWI GCNNNNNNNGC 6 cut(s) 224, 230, 244, 431, 434, 749
BstNI CCWGG 2 cut(s) 269, 1131
BstNSI RCATGY 1 cut(s) 1171
BstSCI CCNGG 2 cut(s) 267, 1129
BstSFI CTRYAG 1 cut(s) 495
BstSLI GKGCMC 2 cut(s) 457, 1183
BstUI CGCG 4 cut(s) 123, 224, 459, 1025
BstV1I GCAGC 6 cut(s) 424, 437, 446, 595, 755, 844
BstV2I GAAGAC 1 cut(s) 935
BstX2I RGATCY 1 cut(s) 142
BstYI RGATCY 1 cut(s) 142
BsuRI GGCC 5 cut(s) 183, 285, 738, 781, 1006
BtrI CACGTC 1 cut(s) 167
BtsCI GGATG 4 cut(s) 313, 416, 507, 783
BtsIMutI CAGTG 1 cut(s) 805
Cac8I GCNNGC 4 cut(s) 202, 209, 457, 1004
CaiI CAGNNNCTG 2 cut(s) 428, 440
CfoI GCGC 3 cut(s) 125, 172, 1025
Cfr10I RCCGGY 1 cut(s) 207
Cfr13I GGNCC 2 cut(s) 780, 1005
CspCI CAANNNNNGTGG 2 cut(s) 961, 996
CviAII CATG 7 cut(s) 485, 556, 777, 933, 1084, 1136, 1168
DdeI CTNAG 3 cut(s) 248, 316, 668
DpnI GATC 4 cut(s) 144, 772, 1071, 1088
DpnII GATC 4 cut(s) 142, 770, 1069, 1086
DriI GACNNNNNGTC 2 cut(s) 816, 1117
EaeI YGGCCR 1 cut(s) 181
Eam1105I GACNNNNNGTC 2 cut(s) 816, 1117
Eco31I GGTCTC 2 cut(s) 319, 1125
Eco32I GATATC 1 cut(s) 704
Eco88I CYCGRG 1 cut(s) 228
EcoRII CCWGG 2 cut(s) 267, 1129
EcoRV GATATC 1 cut(s) 704
FaeI CATG 7 cut(s) 488, 559, 780, 936, 1087, 1139, 1171
FaqI GGGAC 2 cut(s) 60, 69
FatI CATG 7 cut(s) 484, 555, 776, 932, 1083, 1135, 1167
FauI CCCGC 1 cut(s) 1093
FbaI TGATCA 1 cut(s) 1086
Fnu4HI GCNGC 8 cut(s) 205, 225, 426, 435, 438, 609, 744, 858
FokI GGATG 4 cut(s) 320, 423, 514, 770
Fsp4HI GCNGC 8 cut(s) 205, 225, 426, 435, 438, 609, 744, 858
FspBI CTAG 6 cut(s) 104, 201, 563, 740, 762, 1148
GlaI GCGC 3 cut(s) 124, 171, 1024
GluI GCNGC 8 cut(s) 205, 225, 426, 435, 438, 609, 744, 858
GsaI CCCAGC 1 cut(s) 176
GsuI CTGGAG 1 cut(s) 426
HaeIII GGCC 5 cut(s) 183, 285, 738, 781, 1006
HapII CCGG 2 cut(s) 208, 239
HhaI GCGC 3 cut(s) 125, 172, 1025
Hin1I GRCGYC 1 cut(s) 11
Hin1II CATG 7 cut(s) 488, 559, 780, 936, 1087, 1139, 1171
Hin6I GCGC 3 cut(s) 123, 170, 1023
HinP1I GCGC 3 cut(s) 123, 170, 1023
HindIII AAGCTT 1 cut(s) 725
HinfI GANTC 4 cut(s) 366, 481, 1079, 1112
HpaII CCGG 2 cut(s) 208, 239
HphI GGTGA 2 cut(s) 110, 1079
Hpy166II GTNNAC 6 cut(s) 277, 455, 797, 1159, 1173, 1181
Hpy188I TCNGA 3 cut(s) 319, 371, 1044
Hpy188III TCNNGA 2 cut(s) 140, 528
Hpy8I GTNNAC 6 cut(s) 277, 455, 797, 1159, 1173, 1181
Hpy99I CGWCG 3 cut(s) 13, 16, 158
HpyAV CCTTC 3 cut(s) 797, 932, 1216
HpyCH4III ACNGT 4 cut(s) 698, 814, 916, 1163
HpyCH4IV ACGT 3 cut(s) 11, 166, 1093
HpyCH4V TGCA 6 cut(s) 36, 455, 497, 662, 1181, 1187
HpyF10VI GCNNNNNNNGC 6 cut(s) 224, 230, 244, 431, 434, 749
HpyF3I CTNAG 3 cut(s) 248, 316, 668
HpySE526I ACGT 3 cut(s) 11, 166, 1093
Hsp92I GRCGYC 1 cut(s) 11
Hsp92II CATG 7 cut(s) 488, 559, 780, 936, 1087, 1139, 1171
HspAI GCGC 3 cut(s) 123, 170, 1023
KroI GCCGGC 1 cut(s) 207
KroNI GCCGGC 1 cut(s) 209
Ksp22I TGATCA 1 cut(s) 1086
Kzo9I GATC 4 cut(s) 142, 770, 1069, 1086
LmnI GCTCC 2 cut(s) 191, 1061
Lsp1109I GCAGC 6 cut(s) 424, 437, 446, 595, 755, 844
LweI GCATC 3 cut(s) 298, 331, 1087
MaeI CTAG 6 cut(s) 104, 201, 563, 740, 762, 1148
MaeII ACGT 3 cut(s) 11, 166, 1093
MaeIII GTNAC 5 cut(s) 116, 525, 565, 598, 1163
MalI GATC 4 cut(s) 144, 772, 1071, 1088
MboI GATC 4 cut(s) 142, 770, 1069, 1086
MboII GAAGA 2 cut(s) 698, 940
MflI RGATCY 1 cut(s) 142
MhlI GDGCHC 3 cut(s) 457, 553, 1183
MluCI AATT 8 cut(s) 290, 354, 372, 470, 489, 585, 852, 1045
MlyI GAGTC 3 cut(s) 360, 490, 1106
MmeI TCCRAC 1 cut(s) 46
MroNI GCCGGC 1 cut(s) 207
MseI TTAA 3 cut(s) 344, 723, 1019
MslI CAYNNNNRTG 1 cut(s) 395
MspA1I CMGCKG 2 cut(s) 428, 437
MspI CCGG 2 cut(s) 208, 239
MspR9I CCNGG 2 cut(s) 269, 1131
MvaI CCWGG 2 cut(s) 269, 1131
MvnI CGCG 4 cut(s) 123, 224, 459, 1025
MwoI GCNNNNNNNGC 6 cut(s) 224, 230, 244, 431, 434, 749
NaeI GCCGGC 1 cut(s) 209
NdeII GATC 4 cut(s) 142, 770, 1069, 1086
NgoMIV GCCGGC 1 cut(s) 207
NheI GCTAGC 1 cut(s) 200
NlaIII CATG 7 cut(s) 488, 559, 780, 936, 1087, 1139, 1171
NlaIV GGNNCC 1 cut(s) 1057
NmeAIII GCCGAG 1 cut(s) 259
NmuCI GTSAC 2 cut(s) 116, 525
NspI RCATGY 1 cut(s) 1171
PaeR7I CTCGAG 1 cut(s) 228
PciI ACATGT 1 cut(s) 1167
PdiI GCCGGC 1 cut(s) 209
PfeI GAWTC 1 cut(s) 1079
PflMI CCANNNNNTGG 2 cut(s) 1136, 1220
PkrI GCNGC 8 cut(s) 206, 226, 427, 436, 439, 610, 745, 859
PleI GAGTC 3 cut(s) 360, 489, 1106
PpsI GAGTC 3 cut(s) 360, 489, 1106
PscI ACATGT 1 cut(s) 1167
Psp6I CCWGG 2 cut(s) 267, 1129
PspFI CCCAGC 1 cut(s) 172
PspGI CCWGG 2 cut(s) 267, 1129
PspN4I GGNNCC 1 cut(s) 1057
PspPI GGNCC 2 cut(s) 780, 1005
PspXI VCTCGAGB 1 cut(s) 228
PstI CTGCAG 1 cut(s) 499
PstNI CAGNNNCTG 2 cut(s) 428, 440
PsuI RGATCY 1 cut(s) 142
PvuII CAGCTG 2 cut(s) 428, 437
RseI CAYNNNNRTG 1 cut(s) 395
SaqAI TTAA 3 cut(s) 344, 723, 1019
SatI GCNGC 8 cut(s) 205, 225, 426, 435, 438, 609, 744, 858
Sau3AI GATC 4 cut(s) 142, 770, 1069, 1086
Sau96I GGNCC 2 cut(s) 780, 1005
SchI GAGTC 3 cut(s) 360, 490, 1106
ScrFI CCNGG 2 cut(s) 269, 1131
SduI GDGCHC 3 cut(s) 457, 553, 1183
SfaNI GCATC 3 cut(s) 298, 331, 1087
SfcI CTRYAG 1 cut(s) 495
Sfr274I CTCGAG 1 cut(s) 228
SlaI CTCGAG 1 cut(s) 228
SmiMI CAYNNNNRTG 1 cut(s) 395
SmlI CTYRAG 1 cut(s) 228
SmoI CTYRAG 1 cut(s) 228
SpeI ACTAGT 1 cut(s) 761
Sse9I AATT 8 cut(s) 290, 354, 372, 470, 489, 585, 852, 1045
SsiI CCGC 6 cut(s) 121, 205, 224, 311, 960, 1100
SspMI CTAG 6 cut(s) 104, 201, 563, 740, 762, 1148
StyD4I CCNGG 2 cut(s) 267, 1129
TaaI ACNGT 4 cut(s) 698, 814, 916, 1163
TaiI ACGT 3 cut(s) 14, 169, 1096
TaqI TCGA 4 cut(s) 153, 229, 517, 730
TasI AATT 8 cut(s) 290, 354, 372, 470, 489, 585, 852, 1045
TauI GCSGC 2 cut(s) 207, 227
TfiI GAWTC 1 cut(s) 1079
Tru1I TTAA 3 cut(s) 344, 723, 1019
Tru9I TTAA 3 cut(s) 344, 723, 1019
TscAI CASTG 1 cut(s) 812
TseFI GTSAC 2 cut(s) 116, 525
TseI GCWGC 6 cut(s) 425, 434, 437, 608, 743, 857
Tsp45I GTSAC 2 cut(s) 116, 525
TspGWI ACGGA 5 cut(s) 171, 373, 586, 1048, 1091
TspRI CASTG 1 cut(s) 812
Van91I CCANNNNNTGG 2 cut(s) 1136, 1220
VneI GTGCAC 2 cut(s) 453, 1179
XapI RAATTY 2 cut(s) 354, 1045
XceI RCATGY 1 cut(s) 1171
XcmI CCANNNNNNNNNTGG 1 cut(s) 930
XhoI CTCGAG 1 cut(s) 228
XspI CTAG 6 cut(s) 104, 201, 563, 740, 762, 1148
ZraI GACGTC 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.