Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0006601

Physical Location & Seq

Genomic Coordinates Forward (+)

28014139 .. 28017264

Gene Structure 3126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0200500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3126 bp

ATGGTAGCAAACTCTTTGGAGTCATTTACTCCTACTTGCCATGATGATGAGATCTCTGCCTTGCTGCAATTCAAGCAAAGCTTTGTCATTAGAAAGTCTGCTTCGGTGTACAAGGGTGCTTATCCAAAGATTTCTTCATGGAAATCTGCAGGGGATCAAAACAGCAGTTGTTGCTCATGGGATGGCGTAGAGTGTGATGAGAAGACGGGTCACGTGATTGGGCTTAATCTTAATAGCAGTTATCTCTATGGCACTTTCAGCTCCAACAACACCTTATTCAGTCTTATTCATCTTCAGCGTCTGAACCTCGCAGATAATGATTTCAATTTCTCTCAAATTCCTACTAGCATTAGGAACTTCCCAAGGCTCAGGTATCTCAACCTCTCTTACTCTGTCTTTTCTGGTCATGTCCCATCTGAAGTTTCACAACTCTCTAAGTTGTCTTCCCTCGATCTATCTCGCAATGATGATATGTTTTCGAATGAAGAATTGTTGAGAAGCCTAGCTCAAAATTTAACTGGCCTAGAAACACTTGATCTTTCTTCCATTAATATATCATCCACAGTACCCGACACCCTGGCAAATTTGTCACATTTGACATCCCTCATCCTTTCTGAATGCGGCCTGTTCGGAAAATTACCATTTTCTATTGGTAATCTTAGACATCTCATCGATTTGGACCTTTCATCAAATGAATTTACTGGTCAAATCCCTGCTTCCTTGGCCAATTCATCTCTTTTGACATCCATCTTCCTTGATAACTGCGGCTTTTCTGGCAAATTCCCAGGAAGAATCTTTAAATTAAAGAATTTGAAGGTTCTTCATGTGAGCAACAACCCTGCTCTCACGGTGTATTTTCCTGATGACTATAGTGGAAGTAGTCCTGATCTCATGTCACTCAAACTCTCGTCCACTAATTTGATAAACCTGCCTTTTTCGATAGACAGATTTCATTCACTGAAAGAGTTGGATGTGAATTCATGCAATATTTCAGAAGGTCCAGTACCATTTTCACTTGGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATATAATAAGTTTAATGGTCAAGTACCATTTTCACTTGGTAATCTTAGGGATCTCACCTATTTGGACCTTTCAGGTAATGAGTTTAATGGTCAAGTACCATTTTCACTTGGTAATCTTAGGGATCTCACCTATTTGGACCTTTCATATAATAAGTTTAATGGTCAAGTACCATTTTCACTTGGTAATCTTAGGGATCTCACCTATTTGGACCTTTCAGGTAATGAGTTTAATGGTCAAGTACCATTTTCACTTGGAAATCTCAGGGATCTCACCTATTTGGACCTTTCAGGTAATAAGTTTGATGGTCAAATTCCTGCAGCTACGTTGGGAAACCTTACCCAACTTACATATCTATCACTTTATAGTAACTCTTTTCATGGTTCAGTACCCCAGTCCTTATTCAATCTCATGAATCTTCAAACCCTTTATCTAGATCATAATAATTTGAGTGGTACAGTAGAGTTCCATAAGTTTCTTAACCTACAAAAACTCGCCAATCTAGATCTATCTAATAATAATCTGGAATTGCTCTCAGAATCTAGATTTTTGAATAATGCAACTACTGTACTTCCAAAGTTTGAGTATCTAGGATTGGGTGGGTGCAACATAAGAGAGTTCCCAGATTTCCTAAGATCTCAAGAAGCATTGTTTTATTTAGATCTCTCTGGAAACAAATTGCAAGGCCAAGTACCAAAATGGATGTGGAACACAAGCACTCAAACTCTGTATCACATTAACATTTCTCATAACTTCCTGTCAGGCTTTGAGAAAACTCCAGCTGTCTTTCCCTTGGTTCACCTACAATTCTTAGACCTGTCATTCAACATGTTTCGTGAATTATTATTGTTCCCTTCAACATCCATCGAGTACTACAACATTGCAAACAACCAATTAACGGGACAAGTTTCACCAATGATTTGCAATATGACTTCTCTTAGATACCTTGATTTGTCAAACAACAAGTTGATTGGCGACCTACCTCAGTGTGGGAGAAATTTCAGTGTTAATCTGGAATATCTCAAACTTGGAAACAACTCATTTCTTGGAAATCTTCCTCAATCGTTCTCCAATGGAAGCAATTTAAGGATGATGGATATTAGTCACAACAATTTCCATGGGCAACTACCGAGGTCACTAGCGAATTGTGCAAGTCTTGAAAGTTTAGTCCTTTCACACAATAATTTTAGTGATACCTTCCCTGTTTGGTTGGGGGCTCTCCCTGAGTTGAAAATTTTGACAATGGACCACAATGTGTTCTATGGAGTGATTGTGAAACCTGATAAGAAGAATCTTCATTTCCCGATGCTGCGTATTCTTGATTTGTCTTACAATAATTTCTCAGGTCAGTTTCCATTTGAATACATTTTTTCTGGAAATGGGACAACAAGTATCACTCATGATTTGGAGTATTACTACATTGATTCATATTTTCGTGAGTATTACTCAATCACGATAATCTGTAAAGGTGTGGAGAGATACTACCCAAGAATTCAAGAGGACTTGATACTCATTGACATCTCAAGCAACAATTTTGAAGGAAAGATTCCTGAATTCATTGGGAAACTTGAGGGGATTTGGTCACTCAATCTCTCCAATAACATTCTCACGGGTCACATCCCATCATCGTTGAGCAACTTATCAAGGCTTGAATCGTTGGATCTTTCACATAACAAGCTCTCTGGTGAGATTCCTCAGCAACTGGCACAACTTGATTTTCTCTCAAAGTTCAATGTCTCTCACAACAATCTCACAGGCCCTGTACCACGAGGAATCCACTTCACTACATTTGATAGCAGTTCATATCTAGAAAACCAAGGATTGTGCGGAGATCTATTGCCAAAGAAATGTGGAAATTCTGAGGGCACTCAACTTCCACCTTCAACATCAGAAGATAATGACTCGGGCTCTGGAATTGAATTGGATTGGAAATTTGTTGTGGCAGGGTCAGGGAGTGGCTTGTTGGTGGGAGTGGTTCTTGCAGACTTTGTGATTACCAAGTGGAATGTGTGGTTCATTGAGATTGTTGCAGTACTGATCATGTTTTCGAAAAGGATAAGGAAGCCTAGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004605 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006220 GO:0006221 GO:0006629 GO:0006644 GO:0006650 GO:0006655 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009165 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009941 GO:0009987 GO:0016020 GO:0016024 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019637 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0034641 GO:0034654 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046341 GO:0046471 GO:0046474 GO:0046483 GO:0046486 GO:0055035 GO:0055086 GO:0070567 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00564 ko01100 ko01110 ko04070 map00564 map01100 map01110 map04070

Pfam Domains

Protein Families

CTP_transf_1

Protein Analysis

1041

Amino Acids

116.55

Weight (kDa)

5.47

Isoelectric Point (pI)

39.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	14 - 66	4.4e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	89 - 202	1.8e-08	Leucine-rich repeat region
LRR_14	PF23598	303 - 417	3.3e-11	Leucine-rich repeat region
LRR_14	PF23598	410 - 599	6e-14	Leucine-rich repeat region
LRR_8	PF13855	440 - 500	1e-07	Leucine rich repeat
LRR_14	PF23598	655 - 766	1.3e-06	Leucine-rich repeat region
LRR_8	PF13855	687 - 746	2e-08	Leucine rich repeat
LRR_8	PF13855	878 - 934	5.6e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006601)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45150 AT2G45150 AT2G45150 AT3G60620 AT3G60620
fragaria_vesca	FvH4_7g11110 FvH4_7g11110
malus_domestica	MD02G1210300.v1.1 MD07G1115700.v1.1
prunus_persica	Prupe.2G138300_v2.0.a1 Prupe.2G138300_v2.0.a1
pyrus_communis	pycom02g17210 pycom07g10870
rosa_chinensis	RchiOBHm_Chr1g0349131
rosa_laevigata	RLG00000028603
rosa_multiflora	Rmu_sc0008324.1_g000008 Rmu_sc0012100.1_g000013
rosa_roxburghii	Rroxscaffold_4G00306080
rosa_rugosa	Rorug01G0200400 Rorug01G0200500 Rorug01G0200600
rosa_samantha	Rh1AG218300 Rh1BG183700 Rh1CG202800 Rh1DG213500
rosa_wichuraiana	Rw1G018540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	936
AciI	CCGC	3 cut(s)	621, 765, 2877
AclWI	GGATC	7 cut(s)	162, 1038, 1110, 1182, 1254, 1326, 2718
AcoI	YGGCCR	1 cut(s)	723
AcuI	CTGAAG	2 cut(s)	278, 438
AcvI	CACGTG	1 cut(s)	214
AdeI	CACNNNGTG	1 cut(s)	2305
AfiI	CCNNNNNNNGG	2 cut(s)	1948, 2039
AflIII	ACRYGT	1 cut(s)	1878
AjnI	CCWGG	2 cut(s)	576, 784
AjuI	GAANNNNNNNTTGG	2 cut(s)	118, 150
AluBI	AGCT	6 cut(s)	81, 261, 506, 1373, 1832, 2728
AluI	AGCT	6 cut(s)	81, 261, 506, 1373, 1832, 2728
Alw26I	GTCTC	1 cut(s)	2791
AlwI	GGATC	7 cut(s)	162, 1038, 1110, 1182, 1254, 1326, 2718
AlwNI	CAGNNNCTG	3 cut(s)	301, 2752, 2810
Ama87I	CYCGRG	1 cut(s)	2953
AoxI	GGCC	5 cut(s)	520, 622, 723, 1735, 2806
ApeKI	GCWGC	3 cut(s)	64, 1370, 2359
AseI	ATTAAT	1 cut(s)	549
AspS9I	GGNCC	9 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296, 2807
AsuHPI	GGTGA	7 cut(s)	1099, 1171, 1243, 1315, 1841, 1953, 2747
AsuII	TTCGAA	2 cut(s)	479, 3098
AvaI	CYCGRG	1 cut(s)	2953
AvaII	GGWCC	8 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296
BaeGI	GKGCMC	1 cut(s)	2918
BalI	TGGCCA	1 cut(s)	725
BanII	GRGCYC	2 cut(s)	2269, 2960
BarI	GAAGNNNNNNTAC	2 cut(s)	987, 1019
BauI	CACGAG	1 cut(s)	2817
BbrPI	CACGTG	1 cut(s)	214
BbsI	GAAGAC	2 cut(s)	209, 435
BbvCI	CCTCAGC	1 cut(s)	2745
BbvI	GCAGC	3 cut(s)	51, 1382, 2346
BccI	CCATC	7 cut(s)	176, 421, 755, 1349, 1922, 2137, 2680
BciT130I	CCWGG	2 cut(s)	578, 786
BclI	TGATCA	1 cut(s)	3087
BcoDI	GTCTC	1 cut(s)	2791
BfmI	CTRYAG	3 cut(s)	147, 868, 1368
BfuAI	ACCTGC	1 cut(s)	936
BglII	AGATCT	5 cut(s)	51, 1555, 1685, 1711, 2881
BisI	GCNGC	5 cut(s)	65, 622, 766, 1371, 2360
BlsI	GCNGC	5 cut(s)	66, 623, 767, 1372, 2361
BmcAI	AGTACT	2 cut(s)	1922, 3084
Bme1390I	CCNGG	2 cut(s)	578, 786
Bme18I	GGWCC	8 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296
BmeT110I	CYCGRG	1 cut(s)	2953
BmgT120I	GGNCC	9 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296, 2807
BmrFI	CCNGG	2 cut(s)	578, 786
BmrI	ACTGGG	1 cut(s)	1438
BmsI	GCATC	1 cut(s)	2346
BmuI	ACTGGG	1 cut(s)	1438
BpiI	GAAGAC	2 cut(s)	209, 435
BplI	GAGNNNNNCTC	2 cut(s)	2480, 2512
BpmI	CTGGAG	1 cut(s)	1812
Bpu10I	CCTNAGC	2 cut(s)	368, 2745
Bpu14I	TTCGAA	2 cut(s)	479, 3098
BpuEI	CTTGAG	3 cut(s)	1674, 2557, 2639
Bsa29I	ATCGAT	1 cut(s)	672
BsaAI	YACGTR	1 cut(s)	214
BsaJI	CCNNGG	8 cut(s)	362, 576, 720, 784, 1842, 2167, 2180, 2866
BsaXI	ACNNNNNCTCC	2 cut(s)	2307, 2337
Bsc4I	CCNNNNNNNGG	2 cut(s)	1948, 2039
Bse1I	ACTGG	5 cut(s)	523, 706, 1001, 1444, 2757
Bse3DI	GCAATG	2 cut(s)	469, 1929
BseBI	CCWGG	2 cut(s)	578, 786
BseCI	ATCGAT	1 cut(s)	672
BseDI	CCNNGG	8 cut(s)	362, 576, 720, 784, 1842, 2167, 2180, 2866
BseLI	CCNNNNNNNGG	2 cut(s)	1948, 2039
BseMI	GCAATG	2 cut(s)	469, 1929
BseMII	CTCAG	8 cut(s)	382, 1327, 1599, 2048, 2265, 2406, 2759, 2901
BseNI	ACTGG	5 cut(s)	523, 706, 1001, 1444, 2757
BseSI	GKGCMC	1 cut(s)	2918
BseXI	GCAGC	3 cut(s)	51, 1382, 2346
BshFI	GGCC	5 cut(s)	522, 624, 725, 1737, 2808
BshVI	ATCGAT	1 cut(s)	672
BsiHKCI	CYCGRG	1 cut(s)	2953
BslFI	GGGAC	3 cut(s)	395, 1965, 2446
BslI	CCNNNNNNNGG	2 cut(s)	1948, 2039
BsmAI	GTCTC	1 cut(s)	2791
BsmFI	GGGAC	3 cut(s)	395, 1965, 2446
BsmI	GAATGC	1 cut(s)	623
BsnI	GGCC	5 cut(s)	522, 624, 725, 1737, 2808
BsoBI	CYCGRG	1 cut(s)	2953
Bsp119I	TTCGAA	2 cut(s)	479, 3098
Bsp1286I	GDGCHC	3 cut(s)	2269, 2918, 2960
Bsp1407I	TGTACA	1 cut(s)	108
Bsp19I	CCATGG	1 cut(s)	2167
BspACI	CCGC	3 cut(s)	621, 765, 2877
BspANI	GGCC	5 cut(s)	522, 624, 725, 1737, 2808
BspCNI	CTCAG	8 cut(s)	381, 1326, 1598, 2047, 2266, 2405, 2758, 2902
BspDI	ATCGAT	1 cut(s)	672
BspHI	TCATGA	2 cut(s)	1461, 2449
BspMAI	CTGCAG	2 cut(s)	151, 1372
BspMI	ACCTGC	1 cut(s)	936
BspPI	GGATC	7 cut(s)	162, 1038, 1110, 1182, 1254, 1326, 2718
BspT104I	TTCGAA	2 cut(s)	479, 3098
BsrDI	GCAATG	2 cut(s)	469, 1929
BsrGI	TGTACA	1 cut(s)	108
BsrI	ACTGG	5 cut(s)	523, 706, 1001, 1444, 2757
BssECI	CCNNGG	8 cut(s)	362, 576, 720, 784, 1842, 2167, 2180, 2866
BssSI	CACGAG	1 cut(s)	2817
BssT1I	CCWWGG	5 cut(s)	362, 720, 1842, 2167, 2866
Bst2BI	CACGAG	1 cut(s)	2817
Bst2UI	CCWGG	2 cut(s)	578, 786
Bst4CI	ACNGT	4 cut(s)	565, 850, 1510, 1618
BstAPI	GCANNNNNTGC	1 cut(s)	171
BstAUI	TGTACA	1 cut(s)	108
BstBAI	YACGTR	1 cut(s)	214
BstBI	TTCGAA	2 cut(s)	479, 3098
BstDSI	CCRYGG	1 cut(s)	2167
BstMAI	GTCTC	1 cut(s)	2791
BstMWI	GCNNNNNNNGC	6 cut(s)	73, 171, 258, 722, 774, 2198
BstNI	CCWGG	2 cut(s)	578, 786
BstNSI	RCATGY	1 cut(s)	1882
BstSCI	CCNGG	2 cut(s)	576, 784
BstSFI	CTRYAG	3 cut(s)	147, 868, 1368
BstSLI	GKGCMC	1 cut(s)	2918
BstV1I	GCAGC	3 cut(s)	51, 1382, 2346
BstV2I	GAAGAC	2 cut(s)	209, 435
Bsu15I	ATCGAT	1 cut(s)	672
BsuRI	GGCC	5 cut(s)	522, 624, 725, 1737, 2808
BsuTUI	ATCGAT	1 cut(s)	672
BtgI	CCRYGG	1 cut(s)	2167
BtsIMutI	CAGTG	3 cut(s)	956, 2042, 2059
BveI	ACCTGC	1 cut(s)	936
CaiI	CAGNNNCTG	3 cut(s)	301, 2752, 2810
CciI	TCATGA	2 cut(s)	1461, 2449
Cfr13I	GGNCC	9 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296, 2807
ClaI	ATCGAT	1 cut(s)	672
CseI	GACGC	1 cut(s)	287
DraI	TTTAAA	1 cut(s)	799
DraIII	CACNNNGTG	1 cut(s)	2305
EaeI	YGGCCR	1 cut(s)	723
Eco130I	CCWWGG	5 cut(s)	362, 720, 1842, 2167, 2866
Eco24I	GRGCYC	2 cut(s)	2269, 2960
Eco47I	GGWCC	8 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296
Eco57I	CTGAAG	2 cut(s)	278, 438
Eco72I	CACGTG	1 cut(s)	214
Eco88I	CYCGRG	1 cut(s)	2953
EcoO109I	RGGNCCY	1 cut(s)	2807
EcoRI	GAATTC	3 cut(s)	976, 2541, 2603
EcoRII	CCWGG	2 cut(s)	576, 784
EcoT14I	CCWWGG	5 cut(s)	362, 720, 1842, 2167, 2866
EcoT38I	GRGCYC	2 cut(s)	2269, 2960
ErhI	CCWWGG	5 cut(s)	362, 720, 1842, 2167, 2866
FalI	AAGNNNNNCTT	2 cut(s)	65, 97
FaqI	GGGAC	3 cut(s)	395, 1965, 2446
FbaI	TGATCA	1 cut(s)	3087
Fnu4HI	GCNGC	5 cut(s)	65, 622, 766, 1371, 2360
FriOI	GRGCYC	2 cut(s)	2269, 2960
Fsp4HI	GCNGC	5 cut(s)	65, 622, 766, 1371, 2360
GluI	GCNGC	5 cut(s)	65, 622, 766, 1371, 2360
GsuI	CTGGAG	1 cut(s)	1812
HaeIII	GGCC	5 cut(s)	522, 624, 725, 1737, 2808
HgaI	GACGC	1 cut(s)	287
HindIII	AAGCTT	1 cut(s)	79
HphI	GGTGA	7 cut(s)	1099, 1171, 1243, 1315, 1841, 1953, 2747
Hpy166II	GTNNAC	3 cut(s)	109, 912, 1849
Hpy188I	TCNGA	8 cut(s)	303, 418, 616, 632, 994, 1588, 2911, 2941
Hpy8I	GTNNAC	3 cut(s)	109, 912, 1849
HpyAV	CCTTC	6 cut(s)	808, 989, 1914, 2257, 2582, 2940
HpyCH4III	ACNGT	4 cut(s)	565, 850, 1510, 1618
HpyCH4IV	ACGT	2 cut(s)	213, 1376
HpyF10VI	GCNNNNNNNGC	6 cut(s)	73, 171, 258, 722, 774, 2198
HpySE526I	ACGT	2 cut(s)	213, 1376
Ksp22I	TGATCA	1 cut(s)	3087
LmnI	GCTCC	1 cut(s)	266
Lsp1109I	GCAGC	3 cut(s)	51, 1382, 2346
LweI	GCATC	1 cut(s)	2346
MaeII	ACGT	2 cut(s)	213, 1376
MaeIII	GTNAC	8 cut(s)	209, 588, 894, 1418, 2153, 2184, 2631, 2663
MhlI	GDGCHC	3 cut(s)	2269, 2918, 2960
MlsI	TGGCCA	1 cut(s)	725
MluNI	TGGCCA	1 cut(s)	725
MlyI	GAGTC	2 cut(s)	29, 2945
MmeI	TCCRAC	3 cut(s)	288, 948, 2688
Mox20I	TGGCCA	1 cut(s)	725
MscI	TGGCCA	1 cut(s)	725
MslI	CAYNNNNRTG	1 cut(s)	45
Msp20I	TGGCCA	1 cut(s)	725
MspA1I	CMGCKG	1 cut(s)	1832
MspR9I	CCNGG	2 cut(s)	578, 786
Mva1269I	GAATGC	1 cut(s)	623
MvaI	CCWGG	2 cut(s)	578, 786
MwoI	GCNNNNNNNGC	6 cut(s)	73, 171, 258, 722, 774, 2198
NcoI	CCATGG	1 cut(s)	2167
NmuCI	GTSAC	7 cut(s)	209, 588, 894, 2153, 2184, 2631, 2663
NspI	RCATGY	1 cut(s)	1882
NspV	TTCGAA	2 cut(s)	479, 3098
PagI	TCATGA	2 cut(s)	1461, 2449
PciI	ACATGT	1 cut(s)	1878
PctI	GAATGC	1 cut(s)	623
PfeI	GAWTC	9 cut(s)	792, 1465, 1589, 2341, 2474, 2596, 2702, 2740, 2823
PkrI	GCNGC	5 cut(s)	66, 623, 767, 1372, 2361
PleI	GAGTC	2 cut(s)	28, 2945
PmaCI	CACGTG	1 cut(s)	214
PmlI	CACGTG	1 cut(s)	214
PpsI	GAGTC	2 cut(s)	28, 2945
Ppu21I	YACGTR	1 cut(s)	214
PscI	ACATGT	1 cut(s)	1878
PshBI	ATTAAT	1 cut(s)	549
Psp6I	CCWGG	2 cut(s)	576, 784
PspCI	CACGTG	1 cut(s)	214
PspGI	CCWGG	2 cut(s)	576, 784
PspPI	GGNCC	9 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296, 2807
PstI	CTGCAG	2 cut(s)	151, 1372
PstNI	CAGNNNCTG	3 cut(s)	301, 2752, 2810
PvuII	CAGCTG	1 cut(s)	1832
RseI	CAYNNNNRTG	1 cut(s)	45
SatI	GCNGC	5 cut(s)	65, 622, 766, 1371, 2360
Sau96I	GGNCC	9 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296, 2807
ScaI	AGTACT	2 cut(s)	1922, 3084
SchI	GAGTC	2 cut(s)	29, 2945
ScrFI	CCNGG	2 cut(s)	578, 786
SduI	GDGCHC	3 cut(s)	2269, 2918, 2960
SfaNI	GCATC	1 cut(s)	2346
SfcI	CTRYAG	3 cut(s)	147, 868, 1368
SfuI	TTCGAA	2 cut(s)	479, 3098
SinI	GGWCC	8 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296
SmiMI	CAYNNNNRTG	1 cut(s)	45
SmlI	CTYRAG	3 cut(s)	1689, 2572, 2618
SmoI	CTYRAG	3 cut(s)	1689, 2572, 2618
SsiI	CCGC	3 cut(s)	621, 765, 2877
SspI	AATATT	1 cut(s)	988
StyD4I	CCNGG	2 cut(s)	576, 784
StyI	CCWWGG	5 cut(s)	362, 720, 1842, 2167, 2866
TaaI	ACNGT	4 cut(s)	565, 850, 1510, 1618
TaiI	ACGT	2 cut(s)	216, 1379
TaqI	TCGA	6 cut(s)	450, 479, 672, 938, 1917, 3098
TatI	WGTACW	4 cut(s)	108, 1618, 1920, 3082
TauI	GCSGC	2 cut(s)	624, 768
TfiI	GAWTC	9 cut(s)	792, 1465, 1589, 2341, 2474, 2596, 2702, 2740, 2823
TscAI	CASTG	3 cut(s)	963, 2042, 2059
TseFI	GTSAC	7 cut(s)	209, 588, 894, 2153, 2184, 2631, 2663
TseI	GCWGC	3 cut(s)	64, 1370, 2359
Tsp45I	GTSAC	7 cut(s)	209, 588, 894, 2153, 2184, 2631, 2663
TspRI	CASTG	3 cut(s)	963, 2042, 2059
VpaK11BI	GGWCC	8 cut(s)	679, 998, 1045, 1117, 1189, 1261, 1333, 2296
VspI	ATTAAT	1 cut(s)	549
XbaI	TCTAGA	4 cut(s)	1483, 1552, 1592, 2857
XceI	RCATGY	1 cut(s)	1882
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1752
ZrmI	AGTACT	2 cut(s)	1922, 3084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.