Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006578

Physical Location & Seq

Genomic Coordinates Forward (+)

22467702 .. 22474879

Gene Structure 7178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G182000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGATGATGCAGCAGAAGCCAAAAAGTTCGATGAAAAACCAAACCCCCTTCTTCTCTCATTTGCCTCGGAAATTCTTGGAATTCCAAAAAGGGATTTCTTCTGACAAAGGAAAACACATGGAGCTTTTGAAAGAGGAGTTTTCACCAGTTGACTTCAAAGCTACTAAAACTAACTGCATAAAATATTCTAGACAGGACTTTCTACAACTTCCTTATATCACAACTGACTTTGAATGGAAAGATTATAGTCCTGCAGTTTTCAGACGTATGTTGGAGCTTGATAGCATTGATTATGACCAGTATCATCTGTCAATATGTGGACATCGGACTCTAAAGGAGGTTTGTTTACCGGGAAGATATGGCAGGGTAATTGTATCATCCAATGACAATCGATTTGTGATTAAAACCCTTCGGAAGTCTGAACTGAAGGTATACTTAGAGATGCTTCCAAACTATTACCACCATGTTAAGAAGTATCGGGCCTCAATATTAAAAAAACTGTATGGACTTCATGTTGTCAGGCCAGCGGGAGGGATTAAGGTTTACTGTGCTGTTTGGGGAAACCTGATGCCATCAGAAAATTGCATAGATAAGTGCTATGATCTCAAAGGCTCTTCAATAGGCCGAGCCTGCAGTAAAACAACCATTGAGGATAGAGCCATACTTAAGGATCTGGATTTTGATTTTTGCTTTTACCTGGATCCATTAGTCCGAGCTCGGCTCTTAGCTTGTTCAGGCCATGTTGCCATCATAACCTTTCAGAGACAAGTCAAGTATGACTGCGAGTTTTTGGAAGCAGAGGGCATCATGGATTATAGTTTTTTGCTTGGTATACACATAGAAGCTTCACATGAAGGTTCAATTGATGAAAACGCTGCCAGAAGTTCTACTGCCAAAAAGAAAACGGATGATACTTCAGAACAAAATGAAAGCTCAGAGTTAACTCTTGCCGATATCTGCGATCTACTTGACAGGCCTGGGTTTAAATTTGGGGATAGAATGCCAGCACGTGCTGTCCGGGCATTCAGGAATGAAATGGAAAGTAAATCATATAGGTCGTGCACCAGTGCACAGGAATGCTTCAAGGTTCTTTTAATCTTTGGAATAGTAGATTTTTGTCAGAATTACAATATGAAAAAGCGCATTGAGCATGCTTGCAAGGCAATAAAATATGACTCAAAATCCATCAAGACTGTGAATCCCAAAGCCTATTCTTCTCGCTTTCAAGAGTTTCTGAGCGCAGTATTTCTGCCTGAAGAGTCAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016307 GO:0016308 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0030258 GO:0044237 GO:0044238 GO:0044255 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

PIP5K

Protein Analysis

423

Amino Acids

48.75

Weight (kDa)

8.71

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006578)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01460 AT4G01190 AT4G01190 AT4G01190
fragaria_vesca	FvH4_7g15740 FvH4_7g15740 FvH4_7g15740 FvH4_7g15740
malus_domestica	MD01G1073900.v1.1 MD07G1142600.v1.1
prunus_persica	Prupe.2G182000_v2.0.a1 Prupe.2G182000_v2.0.a1
pyrus_communis	pycom01g10310
rosa_chinensis	RchiOBHm_Chr1g0358451
rosa_laevigata	RLG00000027957
rosa_multiflora	Rmu_co8148590.1_g000001 Rmu_sc0008220.1_g000008
rosa_roxburghii	Rroxscaffold_4G00297910
rosa_rugosa	Rorug01G0262000 Rorug01G0262100 Rorug01G0262200
rosa_samantha	Rh1AG276600 Rh1BG243100 Rh1CG260200 Rh1DG271400
rosa_wichuraiana	Rw1G024600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	432, 832
AciI	CCGC	1 cut(s)	527
AclWI	GGATC	3 cut(s)	678, 695, 708
AcsI	RAATTY	3 cut(s)	71, 80, 986
AcuI	CTGAAG	2 cut(s)	446, 900
AcvI	CACGTG	1 cut(s)	1010
AfiI	CCNNNNNNNGG	1 cut(s)	530
AflII	CTTAAG	1 cut(s)	665
AgsI	TTSAA	7 cut(s)	130, 157, 233, 618, 861, 1084, 1226
AjnI	CCWGG	2 cut(s)	696, 976
AluBI	AGCT	7 cut(s)	124, 161, 277, 716, 728, 845, 933
AluI	AGCT	7 cut(s)	124, 161, 277, 716, 728, 845, 933
Alw21I	GWGCWC	3 cut(s)	718, 1064, 1072
Alw26I	GTCTC	1 cut(s)	757
Alw44I	GTGCAC	2 cut(s)	1060, 1068
AlwI	GGATC	3 cut(s)	678, 695, 708
AoxI	GGCC	5 cut(s)	480, 521, 622, 736, 974
ApaLI	GTGCAC	2 cut(s)	1060, 1068
ApeKI	GCWGC	2 cut(s)	10, 875
ApoI	RAATTY	3 cut(s)	71, 80, 986
ArsI	GACNNNNNNTTYG	2 cut(s)	377, 409
AspLEI	GCGC	2 cut(s)	1143, 1241
AspS9I	GGNCC	1 cut(s)	480
AsuC2I	CCSGG	2 cut(s)	351, 1019
AsuHPI	GGTGA	1 cut(s)	135
BaeGI	GKGCMC	2 cut(s)	1064, 1072
BamHI	GGATCC	1 cut(s)	700
BanII	GRGCYC	1 cut(s)	718
BbrPI	CACGTG	1 cut(s)	1010
Bbv12I	GWGCWC	3 cut(s)	718, 1064, 1072
BbvI	GCAGC	2 cut(s)	22, 862
BccI	CCATC	3 cut(s)	580, 755, 1193
BciT130I	CCWGG	2 cut(s)	698, 978
BcnI	CCSGG	2 cut(s)	351, 1019
BcoDI	GTCTC	1 cut(s)	757
BfaI	CTAG	1 cut(s)	189
BfmI	CTRYAG	2 cut(s)	252, 631
BfrI	CTTAAG	1 cut(s)	665
BisI	GCNGC	2 cut(s)	11, 876
BlsI	GCNGC	2 cut(s)	12, 877
Bme1390I	CCNGG	4 cut(s)	351, 698, 978, 1019
BmgT120I	GGNCC	1 cut(s)	480
BmiI	GGNNCC	1 cut(s)	702
BmrFI	CCNGG	4 cut(s)	351, 698, 978, 1019
BmsI	GCATC	3 cut(s)	432, 558, 813
BplI	GAGNNNNNCTC	2 cut(s)	705, 737
BpuMI	CCSGG	2 cut(s)	351, 1019
Bsa29I	ATCGAT	1 cut(s)	391
BsaAI	YACGTR	1 cut(s)	1010
BsaJI	CCNNGG	2 cut(s)	65, 977
Bsc4I	CCNNNNNNNGG	1 cut(s)	530
Bse1I	ACTGG	3 cut(s)	146, 298, 1065
BseBI	CCWGG	2 cut(s)	698, 978
BseCI	ATCGAT	1 cut(s)	391
BseDI	CCNNGG	2 cut(s)	65, 977
BseGI	GGATG	2 cut(s)	377, 913
BseLI	CCNNNNNNNGG	1 cut(s)	530
BseMII	CTCAG	2 cut(s)	948, 1226
BseNI	ACTGG	3 cut(s)	146, 298, 1065
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	2 cut(s)	1064, 1072
BseXI	GCAGC	2 cut(s)	22, 862
BshFI	GGCC	5 cut(s)	482, 523, 624, 738, 976
BshVI	ATCGAT	1 cut(s)	391
BsiHKAI	GWGCWC	3 cut(s)	718, 1064, 1072
BsiSI	CCGG	2 cut(s)	350, 1018
BslI	CCNNNNNNNGG	1 cut(s)	530
BsmAI	GTCTC	1 cut(s)	757
BsmI	GAATGC	3 cut(s)	1005, 1022, 1082
BsnI	GGCC	5 cut(s)	482, 523, 624, 738, 976
Bsp1286I	GDGCHC	3 cut(s)	718, 1064, 1072
Bsp143I	GATC	4 cut(s)	601, 670, 700, 961
BspACI	CCGC	1 cut(s)	527
BspANI	GGCC	5 cut(s)	482, 523, 624, 738, 976
BspCNI	CTCAG	2 cut(s)	947, 1227
BspDI	ATCGAT	1 cut(s)	391
BspLI	GGNNCC	1 cut(s)	702
BspMAI	CTGCAG	2 cut(s)	256, 635
BspPI	GGATC	3 cut(s)	678, 695, 708
BspQI	GCTCTTC	1 cut(s)	619
BspTI	CTTAAG	1 cut(s)	665
BsrI	ACTGG	3 cut(s)	146, 298, 1065
BssECI	CCNNGG	2 cut(s)	65, 977
BssMI	GATC	4 cut(s)	601, 670, 700, 961
BssNAI	GTATAC	2 cut(s)	433, 833
Bst1107I	GTATAC	2 cut(s)	433, 833
Bst2UI	CCWGG	2 cut(s)	698, 978
Bst4CI	ACNGT	3 cut(s)	501, 548, 1195
Bst6I	CTCTTC	2 cut(s)	619, 1251
BstAFI	CTTAAG	1 cut(s)	665
BstBAI	YACGTR	1 cut(s)	1010
BstC8I	GCNNGC	5 cut(s)	525, 631, 1005, 1152, 1156
BstDEI	CTNAG	4 cut(s)	436, 724, 934, 1235
BstF5I	GGATG	2 cut(s)	377, 913
BstHHI	GCGC	2 cut(s)	1143, 1241
BstKTI	GATC	4 cut(s)	604, 673, 703, 964
BstMAI	GTCTC	1 cut(s)	757
BstMBI	GATC	4 cut(s)	601, 670, 700, 961
BstMWI	GCNNNNNNNGC	5 cut(s)	16, 630, 1019, 1147, 1160
BstNI	CCWGG	2 cut(s)	698, 978
BstNSI	RCATGY	1 cut(s)	1154
BstSCI	CCNGG	4 cut(s)	349, 696, 976, 1017
BstSFI	CTRYAG	2 cut(s)	252, 631
BstSLI	GKGCMC	2 cut(s)	1064, 1072
BstV1I	GCAGC	2 cut(s)	22, 862
BstX2I	RGATCY	2 cut(s)	670, 700
BstYI	RGATCY	2 cut(s)	670, 700
BstZ17I	GTATAC	2 cut(s)	433, 833
Bsu15I	ATCGAT	1 cut(s)	391
BsuRI	GGCC	5 cut(s)	482, 523, 624, 738, 976
BsuTUI	ATCGAT	1 cut(s)	391
BtsCI	GGATG	2 cut(s)	377, 913
BtsIMutI	CAGTG	1 cut(s)	1072
Cac8I	GCNNGC	5 cut(s)	525, 631, 1005, 1152, 1156
CfoI	GCGC	2 cut(s)	1143, 1241
Cfr13I	GGNCC	1 cut(s)	480
ClaI	ATCGAT	1 cut(s)	391
CviAII	CATG	7 cut(s)	118, 464, 512, 740, 808, 851, 1151
DdeI	CTNAG	4 cut(s)	436, 724, 934, 1235
DpnI	GATC	4 cut(s)	603, 672, 702, 963
DpnII	GATC	4 cut(s)	601, 670, 700, 961
DraI	TTTAAA	1 cut(s)	985
Eam1104I	CTCTTC	2 cut(s)	619, 1251
EarI	CTCTTC	2 cut(s)	619, 1251
Ecl136II	GAGCTC	1 cut(s)	716
Eco147I	AGGCCT	1 cut(s)	976
Eco24I	GRGCYC	1 cut(s)	718
Eco32I	GATATC	1 cut(s)	955
Eco53kI	GAGCTC	1 cut(s)	716
Eco57I	CTGAAG	2 cut(s)	446, 900
Eco72I	CACGTG	1 cut(s)	1010
EcoICRI	GAGCTC	1 cut(s)	716
EcoRI	GAATTC	1 cut(s)	80
EcoRII	CCWGG	2 cut(s)	696, 976
EcoRV	GATATC	1 cut(s)	955
EcoT38I	GRGCYC	1 cut(s)	718
FaeI	CATG	7 cut(s)	121, 467, 515, 743, 811, 854, 1154
FalI	AAGNNNNNCTT	2 cut(s)	419, 451
FatI	CATG	7 cut(s)	117, 463, 511, 739, 807, 850, 1150
FauI	CCCGC	1 cut(s)	520
FblI	GTMKAC	2 cut(s)	432, 832
Fnu4HI	GCNGC	2 cut(s)	11, 876
FokI	GGATG	2 cut(s)	364, 920
FriOI	GRGCYC	1 cut(s)	718
Fsp4HI	GCNGC	2 cut(s)	11, 876
FspBI	CTAG	1 cut(s)	189
GlaI	GCGC	2 cut(s)	1142, 1240
GluI	GCNGC	2 cut(s)	11, 876
HaeIII	GGCC	5 cut(s)	482, 523, 624, 738, 976
HapII	CCGG	2 cut(s)	350, 1018
HhaI	GCGC	2 cut(s)	1143, 1241
Hin1II	CATG	7 cut(s)	121, 467, 515, 743, 811, 854, 1154
Hin6I	GCGC	2 cut(s)	1141, 1239
HinP1I	GCGC	2 cut(s)	1141, 1239
HincII	GTYRAC	2 cut(s)	151, 942
HindII	GTYRAC	2 cut(s)	151, 942
HindIII	AAGCTT	1 cut(s)	843
HinfI	GANTC	4 cut(s)	328, 1175, 1198, 1259
HpaI	GTTAAC	1 cut(s)	942
HpaII	CCGG	2 cut(s)	350, 1018
HphI	GGTGA	1 cut(s)	135
Hpy166II	GTNNAC	9 cut(s)	151, 320, 347, 433, 544, 833, 942, 1062, 1070
Hpy188III	TCNNGA	5 cut(s)	189, 674, 1027, 1189, 1226
Hpy8I	GTNNAC	9 cut(s)	151, 320, 347, 433, 544, 833, 942, 1062, 1070
HpyAV	CCTTC	4 cut(s)	58, 419, 421, 848
HpyCH4III	ACNGT	3 cut(s)	501, 548, 1195
HpyCH4IV	ACGT	2 cut(s)	265, 1009
HpyCH4V	TGCA	8 cut(s)	10, 177, 254, 585, 633, 1062, 1070, 1158
HpyF10VI	GCNNNNNNNGC	5 cut(s)	16, 630, 1019, 1147, 1160
HpyF3I	CTNAG	4 cut(s)	436, 724, 934, 1235
HpySE526I	ACGT	2 cut(s)	265, 1009
Hsp92II	CATG	7 cut(s)	121, 467, 515, 743, 811, 854, 1154
HspAI	GCGC	2 cut(s)	1141, 1239
KspAI	GTTAAC	1 cut(s)	942
Kzo9I	GATC	4 cut(s)	601, 670, 700, 961
LguI	GCTCTTC	1 cut(s)	619
LmnI	GCTCC	2 cut(s)	121, 274
Lsp1109I	GCAGC	2 cut(s)	22, 862
LweI	GCATC	3 cut(s)	432, 558, 813
MaeI	CTAG	1 cut(s)	189
MaeII	ACGT	2 cut(s)	265, 1009
MalI	GATC	4 cut(s)	603, 672, 702, 963
MboI	GATC	4 cut(s)	601, 670, 700, 961
MboII	GAAGA	6 cut(s)	43, 90, 366, 606, 1206, 1268
MfeI	CAATTG	1 cut(s)	861
MflI	RGATCY	2 cut(s)	670, 700
MhlI	GDGCHC	3 cut(s)	718, 1064, 1072
MluCI	AATT	7 cut(s)	71, 80, 369, 580, 861, 986, 1123
MlyI	GAGTC	3 cut(s)	322, 1169, 1268
MmeI	TCCRAC	1 cut(s)	252
MnlI	CCTC	7 cut(s)	75, 127, 331, 493, 524, 643, 793
MseI	TTAA	8 cut(s)	402, 468, 491, 537, 666, 941, 984, 1094
MslI	CAYNNNNRTG	1 cut(s)	1075
MspA1I	CMGCKG	1 cut(s)	527
MspCI	CTTAAG	1 cut(s)	665
MspI	CCGG	2 cut(s)	350, 1018
MspR9I	CCNGG	4 cut(s)	351, 698, 978, 1019
MunI	CAATTG	1 cut(s)	861
Mva1269I	GAATGC	3 cut(s)	1005, 1022, 1082
MvaI	CCWGG	2 cut(s)	698, 978
MwoI	GCNNNNNNNGC	5 cut(s)	16, 630, 1019, 1147, 1160
NciI	CCSGG	2 cut(s)	351, 1019
NdeII	GATC	4 cut(s)	601, 670, 700, 961
NlaIII	CATG	7 cut(s)	121, 467, 515, 743, 811, 854, 1154
NlaIV	GGNNCC	1 cut(s)	702
NmeAIII	GCCGAG	2 cut(s)	650, 697
NspI	RCATGY	1 cut(s)	1154
PaeI	GCATGC	1 cut(s)	1154
PceI	AGGCCT	1 cut(s)	976
PciSI	GCTCTTC	1 cut(s)	619
PctI	GAATGC	3 cut(s)	1005, 1022, 1082
PfeI	GAWTC	1 cut(s)	1198
PkrI	GCNGC	2 cut(s)	12, 877
PleI	GAGTC	3 cut(s)	322, 1169, 1267
PmaCI	CACGTG	1 cut(s)	1010
PmlI	CACGTG	1 cut(s)	1010
PpsI	GAGTC	3 cut(s)	322, 1169, 1267
Ppu21I	YACGTR	1 cut(s)	1010
Psp124BI	GAGCTC	1 cut(s)	718
Psp6I	CCWGG	2 cut(s)	696, 976
PspCI	CACGTG	1 cut(s)	1010
PspGI	CCWGG	2 cut(s)	696, 976
PspN4I	GGNNCC	1 cut(s)	702
PspPI	GGNCC	1 cut(s)	480
PstI	CTGCAG	2 cut(s)	256, 635
PsuI	RGATCY	2 cut(s)	670, 700
RseI	CAYNNNNRTG	1 cut(s)	1075
SacI	GAGCTC	1 cut(s)	718
SapI	GCTCTTC	1 cut(s)	619
SaqAI	TTAA	8 cut(s)	402, 468, 491, 537, 666, 941, 984, 1094
SatI	GCNGC	2 cut(s)	11, 876
Sau3AI	GATC	4 cut(s)	601, 670, 700, 961
Sau96I	GGNCC	1 cut(s)	480
SchI	GAGTC	3 cut(s)	322, 1169, 1268
ScrFI	CCNGG	4 cut(s)	351, 698, 978, 1019
SduI	GDGCHC	3 cut(s)	718, 1064, 1072
SfaNI	GCATC	3 cut(s)	432, 558, 813
SfcI	CTRYAG	2 cut(s)	252, 631
SmiMI	CAYNNNNRTG	1 cut(s)	1075
SmlI	CTYRAG	1 cut(s)	665
SmoI	CTYRAG	1 cut(s)	665
SphI	GCATGC	1 cut(s)	1154
Sse9I	AATT	7 cut(s)	71, 80, 369, 580, 861, 986, 1123
SseBI	AGGCCT	1 cut(s)	976
SsiI	CCGC	1 cut(s)	527
SspI	AATATT	2 cut(s)	185, 489
SspMI	CTAG	1 cut(s)	189
SstI	GAGCTC	1 cut(s)	718
StuI	AGGCCT	1 cut(s)	976
StyD4I	CCNGG	4 cut(s)	349, 696, 976, 1017
TaaI	ACNGT	3 cut(s)	501, 548, 1195
TaiI	ACGT	2 cut(s)	268, 1012
TaqI	TCGA	2 cut(s)	29, 391
TasI	AATT	7 cut(s)	71, 80, 369, 580, 861, 986, 1123
TfiI	GAWTC	1 cut(s)	1198
Tru1I	TTAA	8 cut(s)	402, 468, 491, 537, 666, 941, 984, 1094
Tru9I	TTAA	8 cut(s)	402, 468, 491, 537, 666, 941, 984, 1094
TscAI	CASTG	1 cut(s)	1072
TseI	GCWGC	2 cut(s)	10, 875
TspDTI	ATGAA	7 cut(s)	47, 500, 867, 882, 942, 1047, 1148
TspGWI	ACGGA	1 cut(s)	920
TspRI	CASTG	1 cut(s)	1072
Vha464I	CTTAAG	1 cut(s)	665
VneI	GTGCAC	2 cut(s)	1060, 1068
XapI	RAATTY	3 cut(s)	71, 80, 986
XbaI	TCTAGA	1 cut(s)	188
XceI	RCATGY	1 cut(s)	1154
XmiI	GTMKAC	2 cut(s)	432, 832
XspI	CTAG	1 cut(s)	189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.