Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007445

Physical Location & Seq

Genomic Coordinates Forward (+)

23222817 .. 23224767

Gene Structure 1951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G193900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGCAACCCAACCTGCCCGTCCATGGTTTCGGCTAGGCTCCATGGTCCGTCCGGCCACCACCCCTGCCCCTGCACCAACCCCTGCCCCGGCACCCGTGGTTAGACCTGCATTCAGGCCATTGACTCCTGCACCTGAACCAACCCCAACTCCACCACCAGCTCCAACCCCAACTCCAGCACCCACCACCACAGCTCCGCCACCACCTCCTGCAGCCGCTGCTCAGCCACCACCACCTCCTGCCGTCGCTGCTCAGCCACCACCACCTCCTGCCGTCGCTGCTCCGCCACCACCACCTCCGGCCGTCGCTGCTCAGCCACCACCACCTCCTGCCGCTGCTGCTCCACCGCCTCCTACTGCCGTTCTTATGCGTCGGCCACCACCACCTGCGGCAACTCCAGCACCACCTCCTCCTGCGACTAGTACTACTGCATCAGTTCCACCATCACCAATTTCAAAAGCAGCATCTTCTTCAGTGCCATCATCTCCTGGAATCAGGGTTGGTATAGCCCCATCTTCTTCAGTGGCACCATCTCCTGATAGGAACAAGGTCACTAAAGCTTCAACTTCTACTACTGATTCAGTGCCAAGTTCTCCATCCTATAAACCACAAACTAGTACTACTTCTCCACCAAAACCCACCATCTTTTCAGCCCCTGCAAAGTCTCCTCCAGAATCTAAACCACAGCCAACACAAACTTATTCTCCACCAAAACCGACAGCCACCACCATTTCAGCCACTGCTAGGGAGCCTTATAATGCCCCATCTCCCAGAACCATTAGGCCAGCTGCCACTAAGACCCCACCTCAGTCGCCAAAGATCAAGTCAATTGCCCCACCACCCTCTCCTTTCACTCTCCCACCCCCTCAGCTAAAGCCCAGCACTTCAGACCAAACTGAGCAACCCAGGATTCCCATGGAGGCAGAGCAGAAAACAGTGCTGGTCCAACAAAAGACCATTGATCATCCAAAATCCAGAGACTTACGCGAGTCTCTCAAGCCAAGCATCAATGCCCACGGTTCAAAGCATGAAGGAGAAACCAAAGAGAGAGCTATAACTCGCAAGAAGCCTGCATCAGACACCTCTGATCATGAGGCAGGAGGCATGAGGGTCATAACCATTGCAGGGGAAAACAGAGGAGCTTTCATGGAACTCAAACAATCTCCTCAGAAACATGGACTTGGGGAGCAATCTCAGTATCTTTGCAAGAAAGGCAATGGAAAAACGGTGACTGGGACTCAATCTGATCAGAACAATAGCAGCAGCAGCAGCAGCAGCAGTGGTGAGGAAGGCAAAGGCAAGAGCAAAAGTAAGGACAAAAGTCTCAAAGCAGGGAAGGCTGCAGGGAAATCAGCATCAGCACAGCCTACAAGGGCATTCATGAACAGCAATGTTCAAGGCATCAACAACTCCATTGTCTACAACACTTCCCTCACTCACCATGATCCTGGGGTCCACCTTGCTTTCTCTAGGAAGCCCAGTGGGGATGGATTTGAGGCCAAGAGCCTTGTCAATGGCCGCCACAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

510

Amino Acids

52.39

Weight (kDa)

10.3

Isoelectric Point (pI)

70.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46630
fragaria_vesca	FvH4_4g01200 FvH4_4g01200 FvH4_7g17260
prunus_persica	Prupe.2G193900_v2.0.a1
pyrus_communis	pycom07g15240
rosa_chinensis	RchiOBHm_Chr1g0360631 RchiOBHm_Chr3g0484701
rosa_laevigata	RLG00000023206 RLG00000027793
rosa_multiflora	Rmu_sc0001910.1_g000009
rosa_roxburghii	Rroxscaffold_4G00295940 Rroxscaffold_6G00397490
rosa_rugosa	Rorug01G0280500 Rorug03G0213600
rosa_samantha	Rh1AG292400 Rh1BG257300 Rh1CG275100 Rh1DG287200 Rh3AG263800 Rh3BG298900 Rh3CG296400 Rh3DG292500
rosa_wichuraiana	Rw1G025890 Rw3G023520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	756
AarI	CACCTGC	1 cut(s)	394
Acc36I	ACCTGC	3 cut(s)	22, 115, 394
AccB1I	GGYRCC	2 cut(s)	91, 526
AccI	GTMKAC	1 cut(s)	1419
AccII	CGCG	1 cut(s)	987
AciI	CCGC	7 cut(s)	197, 216, 284, 333, 347, 389, 1519
AclWI	GGATC	1 cut(s)	1439
AcoI	YGGCCR	4 cut(s)	54, 300, 374, 1516
AcuI	CTGAAG	3 cut(s)	456, 504, 870
AfaI	GTAC	2 cut(s)	424, 619
AfiI	CCNNNNNNNGG	4 cut(s)	24, 88, 744, 1125
AgsI	TTSAA	4 cut(s)	456, 564, 1023, 1397
AhlI	ACTAGT	2 cut(s)	419, 614
AjnI	CCWGG	3 cut(s)	487, 905, 1447
AluBI	AGCT	7 cut(s)	161, 194, 560, 788, 871, 1052, 1142
AluI	AGCT	7 cut(s)	161, 194, 560, 788, 871, 1052, 1142
Alw26I	GTCTC	4 cut(s)	669, 972, 996, 1328
AlwI	GGATC	1 cut(s)	1439
AlwNI	CAGNNNCTG	3 cut(s)	218, 656, 740
AoxI	GGCC	7 cut(s)	54, 116, 300, 374, 782, 1497, 1516
ArsI	GACNNNNNNTTYG	2 cut(s)	809, 841
AspS9I	GGNCC	3 cut(s)	46, 943, 1453
AsuC2I	CCSGG	1 cut(s)	89
AsuHPI	GGTGA	4 cut(s)	438, 1240, 1295, 1430
AvaII	GGWCC	3 cut(s)	46, 943, 1453
BanI	GGYRCC	2 cut(s)	91, 526
BbvCI	CCTCAGC	1 cut(s)	867
BccI	CCATC	8 cut(s)	451, 487, 520, 538, 604, 650, 772, 1481
BceAI	ACGGC	4 cut(s)	227, 257, 287, 344
BciT130I	CCWGG	3 cut(s)	489, 907, 1449
BclI	TGATCA	3 cut(s)	961, 1087, 1246
BcnI	CCSGG	1 cut(s)	89
BcoDI	GTCTC	4 cut(s)	669, 972, 996, 1328
BcuI	ACTAGT	2 cut(s)	419, 614
BfaI	CTAG	5 cut(s)	35, 420, 615, 744, 1470
BfmI	CTRYAG	2 cut(s)	210, 1341
BfuAI	ACCTGC	3 cut(s)	22, 115, 394
BlpI	GCTNAGC	3 cut(s)	222, 252, 312
BmcAI	AGTACT	2 cut(s)	424, 619
Bme1390I	CCNGG	4 cut(s)	89, 489, 907, 1449
Bme18I	GGWCC	3 cut(s)	46, 943, 1453
BmgT120I	GGNCC	3 cut(s)	46, 943, 1453
BmiI	GGNNCC	5 cut(s)	40, 93, 528, 750, 1454
BmrFI	CCNGG	4 cut(s)	89, 489, 907, 1449
BmrI	ACTGGG	2 cut(s)	1242, 1473
BmsI	GCATC	6 cut(s)	440, 473, 1014, 1082, 1364, 1410
BmuI	ACTGGG	2 cut(s)	1242, 1473
BoxI	GACNNNNGTC	1 cut(s)	1320
BpmI	CTGGAG	3 cut(s)	159, 381, 654
Bpu10I	CCTNAGC	1 cut(s)	867
Bpu1102I	GCTNAGC	3 cut(s)	222, 252, 312
BpuEI	CTTGAG	1 cut(s)	980
BpuMI	CCSGG	1 cut(s)	89
BsaJI	CCNNGG	8 cut(s)	23, 42, 87, 96, 905, 915, 1015, 1448
Bsc4I	CCNNNNNNNGG	4 cut(s)	24, 88, 744, 1125
Bse1I	ACTGG	2 cut(s)	1237, 1479
Bse3DI	GCAATG	3 cut(s)	1119, 1222, 1396
BseBI	CCWGG	3 cut(s)	489, 907, 1449
BseDI	CCNNGG	8 cut(s)	23, 42, 87, 96, 905, 915, 1015, 1448
BseGI	GGATG	3 cut(s)	596, 964, 1492
BseLI	CCNNNNNNNGG	4 cut(s)	24, 88, 744, 1125
BseMI	GCAATG	3 cut(s)	1119, 1222, 1396
BseMII	CTCAG	8 cut(s)	236, 266, 326, 821, 881, 888, 1181, 1208
BseNI	ACTGG	2 cut(s)	1237, 1479
BseRI	GAGGAG	4 cut(s)	399, 657, 1152, 1155
BseX3I	CGGCCG	1 cut(s)	300
BseYI	CCCAGC	1 cut(s)	878
BsgI	GTGCAG	2 cut(s)	57, 114
Bsh1236I	CGCG	1 cut(s)	987
Bsh1285I	CGRYCG	1 cut(s)	303
BshFI	GGCC	7 cut(s)	56, 118, 302, 376, 784, 1499, 1518
BshNI	GGYRCC	2 cut(s)	91, 526
BsiEI	CGRYCG	1 cut(s)	303
BsiSI	CCGG	3 cut(s)	53, 89, 299
BslFI	GGGAC	1 cut(s)	1249
BslI	CCNNNNNNNGG	4 cut(s)	24, 88, 744, 1125
BsmAI	GTCTC	4 cut(s)	669, 972, 996, 1328
BsmFI	GGGAC	1 cut(s)	1249
BsmI	GAATGC	2 cut(s)	110, 1376
BsnI	GGCC	7 cut(s)	56, 118, 302, 376, 784, 1499, 1518
Bsp143I	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
Bsp1720I	GCTNAGC	3 cut(s)	222, 252, 312
Bsp19I	CCATGG	3 cut(s)	23, 42, 915
BspACI	CCGC	7 cut(s)	197, 216, 284, 333, 347, 389, 1519
BspANI	GGCC	7 cut(s)	56, 118, 302, 376, 784, 1499, 1518
BspCNI	CTCAG	8 cut(s)	235, 265, 325, 820, 880, 889, 1180, 1207
BspFNI	CGCG	1 cut(s)	987
BspHI	TCATGA	2 cut(s)	1090, 1380
BspLI	GGNNCC	5 cut(s)	40, 93, 528, 750, 1454
BspMAI	CTGCAG	2 cut(s)	214, 1345
BspMI	ACCTGC	3 cut(s)	22, 115, 394
BspPI	GGATC	1 cut(s)	1439
BspT107I	GGYRCC	2 cut(s)	91, 526
BsrDI	GCAATG	3 cut(s)	1119, 1222, 1396
BsrI	ACTGG	2 cut(s)	1237, 1479
BssECI	CCNNGG	8 cut(s)	23, 42, 87, 96, 905, 915, 1015, 1448
BssMI	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
BssT1I	CCWWGG	3 cut(s)	23, 42, 915
Bst2UI	CCWGG	3 cut(s)	489, 907, 1449
Bst4CI	ACNGT	4 cut(s)	937, 1019, 1228, 1526
BstAPI	GCANNNNNTGC	1 cut(s)	218
BstC8I	GCNNGC	2 cut(s)	786, 1071
BstDEI	CTNAG	9 cut(s)	222, 252, 312, 795, 807, 867, 897, 1167, 1194
BstDSI	CCRYGG	5 cut(s)	23, 42, 96, 915, 1015
BstF5I	GGATG	3 cut(s)	596, 964, 1492
BstFNI	CGCG	1 cut(s)	987
BstKTI	GATC	5 cut(s)	822, 964, 1090, 1249, 1447
BstMAI	GTCTC	4 cut(s)	669, 972, 996, 1328
BstMBI	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
BstMCI	CGRYCG	1 cut(s)	303
BstNI	CCWGG	3 cut(s)	489, 907, 1449
BstPAI	GACNNNNGTC	1 cut(s)	1320
BstSCI	CCNGG	4 cut(s)	87, 487, 905, 1447
BstSFI	CTRYAG	2 cut(s)	210, 1341
BstUI	CGCG	1 cut(s)	987
BstXI	CCANNNNNNTGG	1 cut(s)	1448
BstZI	CGGCCG	1 cut(s)	300
BsuRI	GGCC	7 cut(s)	56, 118, 302, 376, 784, 1499, 1518
BtgI	CCRYGG	5 cut(s)	23, 42, 96, 915, 1015
BtsCI	GGATG	3 cut(s)	596, 964, 1492
BtsI	GCAGTG	2 cut(s)	738, 1285
BtsIMutI	CAGTG	7 cut(s)	480, 528, 588, 738, 942, 1285, 1486
BveI	ACCTGC	3 cut(s)	22, 115, 394
Cac8I	GCNNGC	2 cut(s)	786, 1071
CaiI	CAGNNNCTG	3 cut(s)	218, 656, 740
CciI	TCATGA	2 cut(s)	1090, 1380
Cfr13I	GGNCC	3 cut(s)	46, 943, 1453
CseI	GACGC	1 cut(s)	359
Csp6I	GTAC	2 cut(s)	423, 618
CviQI	GTAC	2 cut(s)	423, 618
DdeI	CTNAG	9 cut(s)	222, 252, 312, 795, 807, 867, 897, 1167, 1194
DpnI	GATC	5 cut(s)	821, 963, 1089, 1248, 1446
DpnII	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
EaeI	YGGCCR	4 cut(s)	54, 300, 374, 1516
EagI	CGGCCG	1 cut(s)	300
EciI	GGCGGA	2 cut(s)	186, 273
EclXI	CGGCCG	1 cut(s)	300
Eco130I	CCWWGG	3 cut(s)	23, 42, 915
Eco47I	GGWCC	3 cut(s)	46, 943, 1453
Eco52I	CGGCCG	1 cut(s)	300
Eco57I	CTGAAG	3 cut(s)	456, 504, 870
EcoRII	CCWGG	3 cut(s)	487, 905, 1447
EcoT14I	CCWWGG	3 cut(s)	23, 42, 915
ErhI	CCWWGG	3 cut(s)	23, 42, 915
FaqI	GGGAC	1 cut(s)	1249
FbaI	TGATCA	3 cut(s)	961, 1087, 1246
FblI	GTMKAC	1 cut(s)	1419
FokI	GGATG	3 cut(s)	583, 951, 1499
FspBI	CTAG	5 cut(s)	35, 420, 615, 744, 1470
GsaI	CCCAGC	1 cut(s)	882
GsuI	CTGGAG	3 cut(s)	159, 381, 654
HaeIII	GGCC	7 cut(s)	56, 118, 302, 376, 784, 1499, 1518
HapII	CCGG	3 cut(s)	53, 89, 299
HgaI	GACGC	1 cut(s)	359
HindIII	AAGCTT	1 cut(s)	558
HinfI	GANTC	7 cut(s)	124, 492, 578, 674, 910, 989, 1237
HpaII	CCGG	3 cut(s)	53, 89, 299
HphI	GGTGA	4 cut(s)	438, 1240, 1295, 1430
Hpy166II	GTNNAC	2 cut(s)	1420, 1456
Hpy188I	TCNGA	6 cut(s)	889, 1078, 1087, 1170, 1246, 1251
Hpy188III	TCNNGA	5 cut(s)	536, 671, 975, 1091, 1381
Hpy8I	GTNNAC	2 cut(s)	1420, 1456
Hpy99I	CGWCG	4 cut(s)	248, 278, 308, 375
HpyAV	CCTTC	3 cut(s)	1025, 1283, 1330
HpyCH4III	ACNGT	4 cut(s)	937, 1019, 1228, 1526
HpyF3I	CTNAG	9 cut(s)	222, 252, 312, 795, 807, 867, 897, 1167, 1194
Ksp22I	TGATCA	3 cut(s)	961, 1087, 1246
Kzo9I	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
LmnI	GCTCC	8 cut(s)	44, 166, 199, 286, 346, 748, 1139, 1186
LweI	GCATC	6 cut(s)	440, 473, 1014, 1082, 1364, 1410
MaeI	CTAG	5 cut(s)	35, 420, 615, 744, 1470
MaeIII	GTNAC	2 cut(s)	550, 1228
MalI	GATC	5 cut(s)	821, 963, 1089, 1248, 1446
MboI	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
MboII	GAAGA	4 cut(s)	459, 462, 507, 510
MfeI	CAATTG	1 cut(s)	828
MluCI	AATT	2 cut(s)	450, 828
MlyI	GAGTC	3 cut(s)	118, 998, 1231
MmeI	TCCRAC	2 cut(s)	188, 970
MspA1I	CMGCKG	3 cut(s)	218, 335, 788
MspI	CCGG	3 cut(s)	53, 89, 299
MspR9I	CCNGG	4 cut(s)	89, 489, 907, 1449
MunI	CAATTG	1 cut(s)	828
Mva1269I	GAATGC	2 cut(s)	110, 1376
MvaI	CCWGG	3 cut(s)	489, 907, 1449
MvnI	CGCG	1 cut(s)	987
NciI	CCSGG	1 cut(s)	89
NcoI	CCATGG	3 cut(s)	23, 42, 915
NdeII	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
NlaIV	GGNNCC	5 cut(s)	40, 93, 528, 750, 1454
NmuCI	GTSAC	2 cut(s)	550, 1228
PagI	TCATGA	2 cut(s)	1090, 1380
PaqCI	CACCTGC	1 cut(s)	394
PctI	GAATGC	2 cut(s)	110, 1376
PfeI	GAWTC	4 cut(s)	492, 578, 674, 910
PfoI	TCCNGGA	1 cut(s)	487
PleI	GAGTC	3 cut(s)	118, 997, 1231
PpsI	GAGTC	3 cut(s)	118, 997, 1231
PshAI	GACNNNNGTC	1 cut(s)	1320
PsiI	TTATAA	1 cut(s)	756
Psp6I	CCWGG	3 cut(s)	487, 905, 1447
PspFI	CCCAGC	1 cut(s)	878
PspGI	CCWGG	3 cut(s)	487, 905, 1447
PspN4I	GGNNCC	5 cut(s)	40, 93, 528, 750, 1454
PspPI	GGNCC	3 cut(s)	46, 943, 1453
PstI	CTGCAG	2 cut(s)	214, 1345
PstNI	CAGNNNCTG	3 cut(s)	218, 656, 740
PvuII	CAGCTG	1 cut(s)	788
RsaI	GTAC	2 cut(s)	424, 619
RsaNI	GTAC	2 cut(s)	423, 618
Sau3AI	GATC	5 cut(s)	819, 961, 1087, 1246, 1444
Sau96I	GGNCC	3 cut(s)	46, 943, 1453
ScaI	AGTACT	2 cut(s)	424, 619
SchI	GAGTC	3 cut(s)	118, 998, 1231
ScrFI	CCNGG	4 cut(s)	89, 489, 907, 1449
SfaNI	GCATC	6 cut(s)	440, 473, 1014, 1082, 1364, 1410
SfcI	CTRYAG	2 cut(s)	210, 1341
SinI	GGWCC	3 cut(s)	46, 943, 1453
SmlI	CTYRAG	1 cut(s)	995
SmoI	CTYRAG	1 cut(s)	995
SpeI	ACTAGT	2 cut(s)	419, 614
Sse9I	AATT	2 cut(s)	450, 828
SsiI	CCGC	7 cut(s)	197, 216, 284, 333, 347, 389, 1519
SspMI	CTAG	5 cut(s)	35, 420, 615, 744, 1470
StyD4I	CCNGG	4 cut(s)	87, 487, 905, 1447
StyI	CCWWGG	3 cut(s)	23, 42, 915
TaaI	ACNGT	4 cut(s)	937, 1019, 1228, 1526
TasI	AATT	2 cut(s)	450, 828
TatI	WGTACW	2 cut(s)	422, 617
TauI	GCSGC	4 cut(s)	218, 335, 392, 1521
TfiI	GAWTC	4 cut(s)	492, 578, 674, 910
TscAI	CASTG	7 cut(s)	480, 528, 588, 745, 942, 1285, 1486
TseFI	GTSAC	2 cut(s)	550, 1228
Tsp45I	GTSAC	2 cut(s)	550, 1228
TspDTI	ATGAA	4 cut(s)	1044, 1135, 1369, 1397
TspGWI	ACGGA	1 cut(s)	38
TspRI	CASTG	7 cut(s)	480, 528, 588, 745, 942, 1285, 1486
VpaK11BI	GGWCC	3 cut(s)	46, 943, 1453
XcmI	CCANNNNNNNNNTGG	1 cut(s)	913
XmiI	GTMKAC	1 cut(s)	1419
XspI	CTAG	5 cut(s)	35, 420, 615, 744, 1470
ZrmI	AGTACT	2 cut(s)	424, 619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.